EWM21911.1, cds8753 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21911.1 vs. NCBI_GenBank
Match: gi|585102257|gb|EWM21911.1| (actin-related protein [Nannochloropsis gaditana]) HSP 1 Score: 898.271 bits (2320), Expect = 0.000e+0 Identity = 440/440 (100.00%), Postives = 440/440 (100.00%), Query Frame = 0 Query: 1 MYCGDEVFSVVGDLGTQSSRFGYAGEDLPKVVFPSAIGNVVHRTGSEEDGDRKKKSTGGASSDVEGAVVAKTKANTSGTLGEANIGIRRTDLELSFPLINGHVQDWDAVECIWAHAFEQLSVKEGAKGVPYMYALPAWASRAESQKSAELAFERFDLGALYLARSPMLSAFSTGRSSGVVCDCGAGSTSAVPILDGYVLNQLVGRSERGGDWLDGKVGEWLESRKAKIGLFGFERGTIPEYMPTTYWRFQEQRVLRDVKESCCLIPQVDSDDGAVFDIEENDAEKGAYELPDGTRVKADKTLCRIPELLMVRGDGAGCSISPADVSPSREGAFHDLPSMVYTAVEKADVDVRKELLGNVILTGGGSCFRGSSERLQYELTEKVPVAYKVKIVTATPLERRFSAWIGGSILASLGSFQQLWLSKAEYEEMGAELACKKRFH 440 MYCGDEVFSVVGDLGTQSSRFGYAGEDLPKVVFPSAIGNVVHRTGSEEDGDRKKKSTGGASSDVEGAVVAKTKANTSGTLGEANIGIRRTDLELSFPLINGHVQDWDAVECIWAHAFEQLSVKEGAKGVPYMYALPAWASRAESQKSAELAFERFDLGALYLARSPMLSAFSTGRSSGVVCDCGAGSTSAVPILDGYVLNQLVGRSERGGDWLDGKVGEWLESRKAKIGLFGFERGTIPEYMPTTYWRFQEQRVLRDVKESCCLIPQVDSDDGAVFDIEENDAEKGAYELPDGTRVKADKTLCRIPELLMVRGDGAGCSISPADVSPSREGAFHDLPSMVYTAVEKADVDVRKELLGNVILTGGGSCFRGSSERLQYELTEKVPVAYKVKIVTATPLERRFSAWIGGSILASLGSFQQLWLSKAEYEEMGAELACKKRFH Sbjct: 1 MYCGDEVFSVVGDLGTQSSRFGYAGEDLPKVVFPSAIGNVVHRTGSEEDGDRKKKSTGGASSDVEGAVVAKTKANTSGTLGEANIGIRRTDLELSFPLINGHVQDWDAVECIWAHAFEQLSVKEGAKGVPYMYALPAWASRAESQKSAELAFERFDLGALYLARSPMLSAFSTGRSSGVVCDCGAGSTSAVPILDGYVLNQLVGRSERGGDWLDGKVGEWLESRKAKIGLFGFERGTIPEYMPTTYWRFQEQRVLRDVKESCCLIPQVDSDDGAVFDIEENDAEKGAYELPDGTRVKADKTLCRIPELLMVRGDGAGCSISPADVSPSREGAFHDLPSMVYTAVEKADVDVRKELLGNVILTGGGSCFRGSSERLQYELTEKVPVAYKVKIVTATPLERRFSAWIGGSILASLGSFQQLWLSKAEYEEMGAELACKKRFH 440
BLAST of EWM21911.1 vs. NCBI_GenBank
Match: gi|674249064|gb|KFK41829.1| (hypothetical protein AALP_AA2G176800 [Arabis alpina]) HSP 1 Score: 290.812 bits (743), Expect = 1.493e-90 Identity = 175/453 (38.63%), Postives = 265/453 (58.50%), Query Frame = 0 Query: 1 MYCGDEVFSVVGDLGTQSSRFGYAGEDLPKVVFPSAIGNVVHRTGSEEDGDRKKKSTGGASSDVEGAVVAKTKANTSGTLGEANIGIRRTDLELSFPLINGHVQDWDAVECIWAHAFEQLSVKEGAKGVPYMYALPAWASRAESQKSAELAFERFDLGALYLARSPMLSAFSTGRSSGVVCDCGAGSTSAVPILDGYVLNQLVGRSERGGDWLDGKVGEWLESRKAKIG-LFGFERG-TIP-EYMPT---------TYWRFQEQRVLRDVKESCCLIPQVDSDDGAVFDIEENDAEKGAYELPDGTRVKADKTLCRIPELLM---VRGDGAGCSISPADVSPSREGAFHDLPSMVYTAVEKADVDVRKELLGNVILTGGGSCFRGSSERLQYELTEKVPVAYKVKIVTA-TPLERRFSAWIGGSILASLGSFQQLWLSKAEYEEMGAELACKK 437 MY GDEV ++V DLG+ + + GYAGED PK VFPS +G VV + D ++ A S+VE +V K K +G + RR +E+ P+ +G V DWD V+ +W HAF + + K P + A P ++ + +K+AEL FE++ + AL++A++P+L++F++GR++ +V DCG GST+ P+LDGYVL + V S GGD+L + + LES+ KI + F+R T P E+ T +Y F ++ ++ D+K+S C +P DD + +I +YELPDG ++ ++P+++ + G S D+ PS G LP+MV + K DVDVR+EL +++L GG S + ERL+ +L E+ P + +VK++ + ERRFS WIGGSILASLGSFQQ+WLSK+EYEE GA +K Sbjct: 1 MYGGDEVSAIVIDLGSHTCKAGYAGEDAPKAVFPSVVG-VVDGNHEMDIDDAANTNSEDAKSNVEESV--KEKGKRKIFVGSQALNFRRDQMEMLSPIKDGIVADWDMVDNVWDHAFRNCLMVD-PKEHPMLLAEPPLNTQQQREKAAELMFEKYQVPALFMAKNPVLTSFASGRATSLVVDCGGGSTTIAPVLDGYVLQKAVVSSPIGGDFLTDCLLKSLESKGIKIKPRYSFKRKETRPGEFQVTGVNVPDTTESYKLFCQRMIVSDIKDSICRVPDTPYDDKSYSNIPTT-----SYELPDGQTLEIGSDRFKVPDVMFNPYIVQTIPGME-SYTDMLPSVRG----LPNMVIECISKCDVDVRRELYSSILLAGGTSSMQQLKERLEKDLVEESPQSARVKVLASGNTTERRFSVWIGGSILASLGSFQQMWLSKSEYEEHGASYIQRK 439
BLAST of EWM21911.1 vs. NCBI_GenBank
Match: gi|217074906|gb|ACJ85813.1| (unknown [Medicago truncatula] >gi|388519325|gb|AFK47724.1| unknown [Medicago truncatula]) HSP 1 Score: 289.271 bits (739), Expect = 6.114e-90 Identity = 171/454 (37.67%), Postives = 257/454 (56.61%), Query Frame = 0 Query: 1 MYCGDEVFSVVGDLGTQSSRFGYAGEDLPKVVFPSAIGNVVHRTGSEEDGDRKKKSTGGASSDVEGAVVAKTKANTSGTLGEANIGIRRTDLELSFPLINGHVQDWDAVECIWAHAFEQLSVKEGAKGVPYMYALPAWASRAESQKSAELAFERFDLGALYLARSPMLSAFSTGRSSGVVCDCGAGSTSAVPILDGYVLNQLVGRSERGGDWLDGKVGEWLESRK-AKIGLFGFERG--------TIPEYMPTT--YWRFQEQRVL-RDVKESCCLIPQVDSDDGAVFDIEENDAEKGAYELPDGTRVKADKTLCRIPELLMVRGDGAGCSI----SPADVSPSREGAFHDLPSMVYTAVEKADVDVRKELLGNVILTGGGSCFRGSSERLQYELTEKVPVAYKVKIV-TATPLERRFSAWIGGSILASLGSFQQLWLSKAEYEEMGAELACKK 437 MY GDEV ++V DLG+ + + GYAGED PK VFPS +G + E D K +G + +++ K K +G ++G RR +E+ PL +G V DWD V+ IW HAF + + K P + A P+ ++ + +++AEL FE++ AL+LA++ +L++F++GR++ +V DCG GST+ P+ DGYVL + V S GG++L + + LES+ A + F R T+ P T ++ QRV+ D+KE C P D+ A +I +YELPDG ++ +IP++L SI S A+++PS G LP MV ++ K DVD+R+EL +++L GG + + ERL+ +L E+ P A +VK++ + ERRFS WIGGSILASLGSFQQ+W SK+EYEE GA +K Sbjct: 1 MYGGDEVSAIVIDLGSHTCKAGYAGEDAPKAVFPSVVGAIDQMDVDESDDAEKNSGSGESKNNIRNVDGDKAKGKRKLYVGSQSLGYRRDFMEVVSPLKDGIVADWDIVDSIWDHAFSRECLLIDPKEHPMLLAEPSSNAQQQRERAAELMFEKYKAPALFLAKNAVLTSFASGRATSLVVDCGGGSTTVAPVHDGYVLQKAVATSPIGGEFLTDCLMKSLESKGIAMKPRYSFRRKEIRPGEFQTVDLDFPNTSESYKLYSQRVIASDIKECVCRAPDTPYDESAYSNIPTT-----SYELPDGQTIEIGADRFKIPDVLF--NPSLAHSIPGMESFAEIAPSVRG----LPQMVIDSINKCDVDIRRELFSSILLAGGTASMQQLKERLEKDLLEESPQAARVKVLASGNTTERRFSVWIGGSILASLGSFQQMWFSKSEYEEHGASYIQRK 443
BLAST of EWM21911.1 vs. NCBI_GenBank
Match: gi|922356678|ref|XP_003615307.2| (actin-related protein ARP4 [Medicago truncatula] >gi|657385204|gb|AES98265.2| actin-related protein ARP4 [Medicago truncatula]) HSP 1 Score: 289.271 bits (739), Expect = 6.383e-90 Identity = 171/454 (37.67%), Postives = 257/454 (56.61%), Query Frame = 0 Query: 1 MYCGDEVFSVVGDLGTQSSRFGYAGEDLPKVVFPSAIGNVVHRTGSEEDGDRKKKSTGGASSDVEGAVVAKTKANTSGTLGEANIGIRRTDLELSFPLINGHVQDWDAVECIWAHAFEQLSVKEGAKGVPYMYALPAWASRAESQKSAELAFERFDLGALYLARSPMLSAFSTGRSSGVVCDCGAGSTSAVPILDGYVLNQLVGRSERGGDWLDGKVGEWLESRK-AKIGLFGFERG--------TIPEYMPTT--YWRFQEQRVL-RDVKESCCLIPQVDSDDGAVFDIEENDAEKGAYELPDGTRVKADKTLCRIPELLMVRGDGAGCSI----SPADVSPSREGAFHDLPSMVYTAVEKADVDVRKELLGNVILTGGGSCFRGSSERLQYELTEKVPVAYKVKIV-TATPLERRFSAWIGGSILASLGSFQQLWLSKAEYEEMGAELACKK 437 MY GDEV ++V DLG+ + + GYAGED PK VFPS +G + E D K +G + +++ K K +G ++G RR +E+ PL +G V DWD V+ IW HAF + + K P + A P+ ++ + +++AEL FE++ AL+LA++ +L++F++GR++ +V DCG GST+ P+ DGYVL + V S GG++L + + LES+ A + F R T+ P T ++ QRV+ D+KE C P D+ A +I +YELPDG ++ +IP++L SI S A+++PS G LP MV ++ K DVD+R+EL +++L GG + + ERL+ +L E+ P A +VK++ + ERRFS WIGGSILASLGSFQQ+W SK+EYEE GA +K Sbjct: 1 MYGGDEVSAIVIDLGSHTCKAGYAGEDAPKAVFPSVVGAIDQMDVDESDDAEKNSGSGESKNNIRNVDGDKAKGKRKLYVGSQSLGYRRDFMEVVSPLKDGIVADWDIVDSIWDHAFSRECLLIDPKEHPMLLAEPSSNAQQQRERAAELMFEKYKAPALFLAKNAVLTSFASGRATSLVVDCGGGSTTVAPVHDGYVLQKAVATSPIGGEFLTDCLMKSLESKGIAMKPRYSFRRKEIRPGEFQTVDLDFPNTSESYKLYSQRVIASDIKECVCRAPDTPYDESAYSNIPTT-----SYELPDGQTIEIGADRFKIPDVLF--NPSLAHSIPGMESFAEIAPSVRG----LPQMVIDSINKCDVDIRRELFSSILLAGGTASMQQLKERLEKDLLEESPQAARVKVLASGNATERRFSVWIGGSILASLGSFQQMWFSKSEYEEHGASYIQRK 443
BLAST of EWM21911.1 vs. NCBI_GenBank
Match: gi|1190945537|ref|XP_020866333.1| (actin-related protein 4 [Arabidopsis lyrata subsp. lyrata] >gi|297336118|gb|EFH66535.1| hypothetical protein ARALYDRAFT_472063 [Arabidopsis lyrata subsp. lyrata]) HSP 1 Score: 287.73 bits (735), Expect = 1.684e-89 Identity = 170/456 (37.28%), Postives = 257/456 (56.36%), Query Frame = 0 Query: 1 MYCGDEVFSVVGDLGTQSSRFGYAGEDLPKVVFPSAIGNVVHRTGSEEDGDRKKKSTGGASSDVEGAVVAKTKANTSGTLGEANIGIRRTDLELSFPLINGHVQDWDAVECIWAHAFEQLSVKEGAKGVPYMYALPAWASRAESQKSAELAFERFDLGALYLARSPMLSAFSTGRSSGVVCDCGAGSTSAVPILDGYVLNQLVGRSERGGDWLDGKVGEWLESRKAKI-------------GLFGFERGTIPEYMPTTYWRFQEQRVLRDVKESCCLIPQVDSDDGAVFDIEENDAEKGAYELPDGTRVKADKTLCRIPELLMVRGDGAGCSISP-----ADVSPSREGAFHDLPSMVYTAVEKADVDVRKELLGNVILTGGGSCFRGSSERLQYELTEKVPVAYKVKIVTA-TPLERRFSAWIGGSILASLGSFQQLWLSKAEYEEMGAELACKK 437 MY GDEV ++V DLG+ + + GYAGED PK VFPS IG V + D D K ++ S E K K +G + RR +E+ P+ +G V DWD V+ IW HAF+ + + + P + A P ++ + +K+AEL FE++ + AL++A++P+L++F+TGR++ +V DCG GST+ P+ DGYVL + V S GG++L + + LES+ KI G F E IP +Y F ++ ++ D+K+S C +P DD + +I +YELPDG ++ ++P+++ + + P AD+ PS G LP MV ++ K DVD+R+EL +++L GG S + ERL+ +L E+ P + +VK++ + ERRFS WIGGSILASLGSFQQ+W SK+EYEE GA +K Sbjct: 1 MYGGDEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIGAVDGIEAMDVDADSTKTNSNSEDSKTESE---KEKGKRKLYVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEH-PMLLAEPPLNTQQQREKAAELMFEKYKVPALFMAKNPVLTSFATGRATSLVVDCGGGSTTISPVHDGYVLQKAVVSSPLGGEFLTDCLLKSLESKGIKIRPRYSFKRKEIRAGEFQVEDVDIPNTT-ESYKLFCQRMIVGDIKDSICRVPDTPYDDKSYSNIPTT-----SYELPDGQMLEIGADRFKVPDVMF---NPSIVQTIPGMEKYADMIPSVRG----LPHMVMESINKCDVDIRRELYSSILLAGGTSSMQQLKERLEKDLIEESPHSARVKVLASGNTTERRFSVWIGGSILASLGSFQQMWFSKSEYEEHGASYIQRK 439
BLAST of EWM21911.1 vs. NCBI_GenBank
Match: gi|21593375|gb|AAM65324.1| (unknown [Arabidopsis thaliana] >gi|1032302030|gb|OAP16355.1| ATARP4 [Arabidopsis thaliana]) HSP 1 Score: 287.345 bits (734), Expect = 2.482e-89 Identity = 170/456 (37.28%), Postives = 258/456 (56.58%), Query Frame = 0 Query: 1 MYCGDEVFSVVGDLGTQSSRFGYAGEDLPKVVFPSAIGNVVHRTGSEEDGDRKKKSTGGASSDVEGAVVAKTKANTSGTLGEANIGIRRTDLELSFPLINGHVQDWDAVECIWAHAFEQLSVKEGAKGVPYMYALPAWASRAESQKSAELAFERFDLGALYLARSPMLSAFSTGRSSGVVCDCGAGSTSAVPILDGYVLNQLVGRSERGGDWLDGKVGEWLESRKAKI-------------GLFGFERGTIPEYMPTTYWRFQEQRVLRDVKESCCLIPQVDSDDGAVFDIEENDAEKGAYELPDGTRVKADKTLCRIPELLMVRGDGAGCSISP-----ADVSPSREGAFHDLPSMVYTAVEKADVDVRKELLGNVILTGGGSCFRGSSERLQYELTEKVPVAYKVKIVTA-TPLERRFSAWIGGSILASLGSFQQLWLSKAEYEEMGAELACKK 437 MY GDEV ++V DLG+ + + GYAGED PK VFPS IG V + D D K ++ S E K K +G + RR +E+ P+ +G V DWD V+ IW HAF+ + + + P + A P ++ + +K+AEL FE++ + AL++A++P+L++F+TGR++ +V DCG GST+ P+ DGYVL + V S GG++L + + LES+ KI G F E IP+ +Y F ++ ++ D+K+S C +P DD + +I +YELPDG ++ ++P+++ + + P AD+ PS G LP MV ++ K DVD+R+EL +++L GG S + ERL+ +L E+ P + +VK++ + ERRFS WIGGSILASLGSFQQ+W SK+EYEE GA +K Sbjct: 1 MYGGDEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIGAVDGVEAMDVDVDSTKTNSNSEDSKTESE---KEKGKRKLYVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEH-PMLLAEPPLNTQQQREKAAELMFEKYKVPALFMAKNPVLTSFATGRATSLVVDCGGGSTTISPVHDGYVLQKAVVSSPLGGEFLTDCLLKSLESKGIKIRPRYSFKRKEVRAGEFQVEDVDIPDTT-ESYKLFCQRMIVGDIKDSICRVPDTPYDDKSYSNIPTT-----SYELPDGQTLEIGADRFKVPDVMF---NPSIVQTIPGMEKYADMIPSVRG----LPHMVMESINKCDVDIRRELYSSILLAGGTSSMQQLKERLEKDLIEESPHSARVKVLASGNTTERRFSVWIGGSILASLGSFQQMWFSKSEYEEHGASYIQRK 439
BLAST of EWM21911.1 vs. NCBI_GenBank
Match: gi|727434013|ref|XP_010498232.1| (PREDICTED: actin-related protein 4-like [Camelina sativa]) HSP 1 Score: 287.345 bits (734), Expect = 2.841e-89 Identity = 171/456 (37.50%), Postives = 259/456 (56.80%), Query Frame = 0 Query: 1 MYCGDEVFSVVGDLGTQSSRFGYAGEDLPKVVFPSAIGNVVHRTGSEEDGDRKKKSTGGASSDVEGAVVAKTKANTSGTLGEANIGIRRTDLELSFPLINGHVQDWDAVECIWAHAFEQLSVKEGAKGVPYMYALPAWASRAESQKSAELAFERFDLGALYLARSPMLSAFSTGRSSGVVCDCGAGSTSAVPILDGYVLNQLVGRSERGGDWLDGKVGEWLESRKAKI-------------GLFGFERGTIPEYMPTTYWRFQEQRVLRDVKESCCLIPQVDSDDGAVFDIEENDAEKGAYELPDGTRVKADKTLCRIPELLMVRGDGAGCSISP-----ADVSPSREGAFHDLPSMVYTAVEKADVDVRKELLGNVILTGGGSCFRGSSERLQYELTEKVPVAYKVKIVTA-TPLERRFSAWIGGSILASLGSFQQLWLSKAEYEEMGAELACKK 437 MY GDEV ++V DLG+ + + GYAGED PK VFPS IG V + D D K ++ + ++ E K K +G + RR +E+ P+ +G V DWD V+ IW HAF + + K P + A P S+ + +K+AEL FE++ + AL++A++P+L++F+TGR++ +V DCG GST+ P+ DGYVL + V S GG++L + + LES+ KI G F E IP+ +Y F ++ ++ D+K+S C +P DD + +I +YELPDG ++ ++P+++ + + P AD+ PS G LP MV ++ K DVD+R+EL +++L GG S + ERL+ +L E+ P + +VK++ + ERRFS WIGGSILASLGSFQQ+W SK+EYEE GA +K Sbjct: 1 MYGGDEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIGAVDGVEAMDMDVDSTKANSEDSKTESE-----KEKGKRKLYVGSQALSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFRSCLMID-PKEHPMLLAEPPLNSQQQREKAAELMFEKYKVPALFMAKNPVLTSFATGRATSLVVDCGGGSTTISPVHDGYVLQKAVVSSPLGGEFLTDCLLKSLESKGIKIKPRYSFKRKEIRAGEFQVEDVDIPD-TKESYKLFCQRMIVGDIKDSICRVPDTPYDDKSYSNIPTT-----SYELPDGQTLEIGADRFKVPDVMF---NPSIVQTIPGMEKYADMIPSVRG----LPHMVMESINKCDVDIRRELYSSILLAGGTSSMQQLKERLEKDLVEESPHSARVKVLASGNTTERRFSVWIGGSILASLGSFQQMWFSKSEYEEHGASYIQRK 437
BLAST of EWM21911.1 vs. NCBI_GenBank
Match: gi|565499798|ref|XP_006307538.1| (hypothetical protein CARUB_v10009163mg [Capsella rubella] >gi|482576249|gb|EOA40436.1| hypothetical protein CARUB_v10009163mg [Capsella rubella]) HSP 1 Score: 287.345 bits (734), Expect = 2.917e-89 Identity = 172/456 (37.72%), Postives = 256/456 (56.14%), Query Frame = 0 Query: 1 MYCGDEVFSVVGDLGTQSSRFGYAGEDLPKVVFPSAIGNVVHRTGSEEDGDRKKKSTGGASSDVEGAVVAKTKANTSGTLGEANIGIRRTDLELSFPLINGHVQDWDAVECIWAHAFEQLSVKEGAKGVPYMYALPAWASRAESQKSAELAFERFDLGALYLARSPMLSAFSTGRSSGVVCDCGAGSTSAVPILDGYVLNQLVGRSERGGDWLDGKVGEWLESRKAKI-------------GLFGFERGTIPEYMPTTYWRFQEQRVLRDVKESCCLIPQVDSDDGAVFDIEENDAEKGAYELPDGTRVKADKTLCRIPELLMVRGDGAGCSISP-----ADVSPSREGAFHDLPSMVYTAVEKADVDVRKELLGNVILTGGGSCFRGSSERLQYELTEKVPVAYKVKIV-TATPLERRFSAWIGGSILASLGSFQQLWLSKAEYEEMGAELACKK 437 MY GDEV ++V DLG+ + + GYAGED PK VFPS IG V + D D K ++ S E K K +G + RR +E+ P+ +G V DWD V+ IW HAF + + K P + A P S+ + +K+AEL FE++ + AL++A++P+L++F+TGR++ +V DCG GST+ P+ DGYVL + V S GG++L + + LES+ KI G F E IP+ +Y F ++ ++ D+K+S C +P DD + +I +YELPDG ++ ++P+++ + P AD+ PS G LP MV ++ K DVD+R+EL +++L GG S + ERL+ +L E+ P + +VK++ + ERRFS WIGGSILASLGSFQQ+W SK+EYEE GA +K Sbjct: 1 MYGGDEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIGAVDGVEAMDVDVDSTKTNSNSEDSKAESE---KDKGKRKLYVGSQALSYRRDHMEVLSPIKDGIVSDWDLVDNIWDHAFRSCLMID-PKEHPMLLAEPPLNSQQQREKAAELMFEKYKVPALFMAKNPVLTSFATGRATSLVVDCGGGSTTISPVHDGYVLQKAVVSSPLGGEFLTDCLLKSLESKGIKIRPRYSFKRKEIRAGEFQVEDVEIPDTT-ESYKLFCQRMIVGDIKDSICRVPDTPYDDKSYSNIPTT-----SYELPDGQTLEIGADRFKVPDVMF---NPPIVQTIPGMEKYADMIPSVRG----LPHMVMESINKCDVDIRRELYSSILLAGGTSSMQQLKERLEKDLIEESPHSARVKVLASGNTTERRFSVWIGGSILASLGSFQQMWFSKSEYEEHGASYIQRK 439
BLAST of EWM21911.1 vs. NCBI_GenBank
Match: gi|727607826|ref|XP_010477023.1| (PREDICTED: actin-related protein 4 [Camelina sativa]) HSP 1 Score: 287.345 bits (734), Expect = 3.030e-89 Identity = 171/456 (37.50%), Postives = 259/456 (56.80%), Query Frame = 0 Query: 1 MYCGDEVFSVVGDLGTQSSRFGYAGEDLPKVVFPSAIGNVVHRTGSEEDGDRKKKSTGGASSDVEGAVVAKTKANTSGTLGEANIGIRRTDLELSFPLINGHVQDWDAVECIWAHAFEQLSVKEGAKGVPYMYALPAWASRAESQKSAELAFERFDLGALYLARSPMLSAFSTGRSSGVVCDCGAGSTSAVPILDGYVLNQLVGRSERGGDWLDGKVGEWLESRKAKI-------------GLFGFERGTIPEYMPTTYWRFQEQRVLRDVKESCCLIPQVDSDDGAVFDIEENDAEKGAYELPDGTRVKADKTLCRIPELLMVRGDGAGCSISP-----ADVSPSREGAFHDLPSMVYTAVEKADVDVRKELLGNVILTGGGSCFRGSSERLQYELTEKVPVAYKVKIVTA-TPLERRFSAWIGGSILASLGSFQQLWLSKAEYEEMGAELACKK 437 MY GDEV ++V DLG+ + + GYAGED PK VFPS IG V + D D K ++ + ++ E K K +G + RR +E+ P+ +G V DWD V+ IW HAF + + K P + A P S+ + +K+AEL FE++ + AL++A++P+L++F+TGR++ +V DCG GST+ P+ DGYVL + V S GG++L + + LES+ KI G F E IP+ +Y F ++ ++ D+K+S C +P DD + +I +YELPDG ++ ++P+++ + + P AD+ PS G LP MV ++ K DVD+R+EL +++L GG S + ERL+ +L E+ P + +VK++ + ERRFS WIGGSILASLGSFQQ+W SK+EYEE GA +K Sbjct: 1 MYGGDEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIGAVEGVEAMDMDVDSTKANSEDSKTESE-----KEKGKRKLYVGSQALSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFRSCLMID-PKEHPMLLAEPPLNSQQQREKAAELMFEKYKVPALFMAKNPVLTSFATGRATSLVVDCGGGSTTISPVHDGYVLQKAVVSSPLGGEFLTDCLLKSLESKGIKIKPRYSFKRKEIRAGEFQVEDVDIPDTT-ESYKLFCQRMIVGDIKDSICRVPDTPYDDKSYSNIPTT-----SYELPDGQTLEIGADRFKVPDVMF---NPSIVQTIPGMEKYADMIPSVRG----LPHMVMESINKCDVDIRRELYSSILLAGGTSSMQQLKERLEKDLVEESPHSARVKVLASGNTTERRFSVWIGGSILASLGSFQQMWFSKSEYEEHGASYIQRK 437
BLAST of EWM21911.1 vs. NCBI_GenBank
Match: gi|18394608|ref|NP_564051.1| (actin-related protein 4 [Arabidopsis thaliana] >gi|75297891|sp|Q84M92.1|ARP4_ARATH RecName: Full=Actin-related protein 4 >gi|21489918|tpg|DAA00027.1| TPA_exp: actin-related protein 4; AtARP4 [Arabidopsis thaliana] >gi|30102728|gb|AAP21282.1| At1g18450 [Arabidopsis thaliana] >gi|110736171|dbj|BAF00057.1| hypothetical protein [Arabidopsis thaliana] >gi|332191594|gb|AEE29715.1| actin-related protein 4 [Arabidopsis thaliana]) HSP 1 Score: 286.574 bits (732), Expect = 5.624e-89 Identity = 169/456 (37.06%), Postives = 259/456 (56.80%), Query Frame = 0 Query: 1 MYCGDEVFSVVGDLGTQSSRFGYAGEDLPKVVFPSAIGNVVHRTGSEEDGDRKKKSTGGASSDVEGAVVAKTKANTSGTLGEANIGIRRTDLELSFPLINGHVQDWDAVECIWAHAFEQLSVKEGAKGVPYMYALPAWASRAESQKSAELAFERFDLGALYLARSPMLSAFSTGRSSGVVCDCGAGSTSAVPILDGYVLNQLVGRSERGGDWLDGKVGEWLESRKAKI-------------GLFGFERGTIPEYMPTTYWRFQEQRVLRDVKESCCLIPQVDSDDGAVFDIEENDAEKGAYELPDGTRVKADKTLCRIPELLMVRGDGAGCSISP-----ADVSPSREGAFHDLPSMVYTAVEKADVDVRKELLGNVILTGGGSCFRGSSERLQYELTEKVPVAYKVKIVTA-TPLERRFSAWIGGSILASLGSFQQLWLSKAEYEEMGAELACKK 437 MY GDEV ++V DLG+ + + GYAGED PK VFPS IG V + D D K ++ S E K K+ +G + RR +E+ P+ +G V DWD V+ IW HAF+ + + + P + A P ++ + +K+AEL FE++ + AL++A++P+L++F+TGR++ +V DCG GST+ P+ DGYVL + V S GG++L + + LES+ KI G F E IP+ +Y F ++ ++ D+K+S C +P DD + +I +YELPDG ++ ++P+++ + + P A++ PS G LP MV ++ K DVD+R+EL +++L GG S + ERL+ +L E+ P + +VK++ + ERRFS WIGGSILASLGSFQQ+W SK+EYEE GA +K Sbjct: 1 MYGGDEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVIGAVDGVEAMDVDVDSTKTNSNSEDSKTESE---KEKSKRKLYVGSQAMSYRRDHMEVLSPIKDGIVSDWDLVDNIWEHAFKSCLMIDPTEH-PMLLAEPPLNTQQQREKAAELMFEKYKVPALFMAKNPVLTSFATGRATSLVVDCGGGSTTISPVHDGYVLQKAVVSSPLGGEFLTDCLLKSLESKGIKIRPRYSFKRKEVRAGEFQVEDVDIPDTT-ESYKLFCQRMIVGDIKDSICRVPDTPYDDKSYSNIPTT-----SYELPDGQTLEIGADRFKVPDVMF---NPSIVQTIPGMEKYAEMIPSVRG----LPHMVMESINKCDVDIRRELYSSILLAGGTSSMQQLKERLEKDLIEESPHSARVKVLASGNTTERRFSVWIGGSILASLGSFQQMWFSKSEYEEHGASYIQRK 439 The following BLAST results are available for this feature:
BLAST of EWM21911.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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