EWM21924.1, cds8752 (CDS) Nannochloropsis gaditana

Overview
NameEWM21924.1
Unique Namecds8752
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037250.1:150720..150821 -
Alignment locationKK037250.1:149572..150255 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21924.1
Producturacil phosphoribosyltransferase
Orig transcript idgnl|cribi|Naga_100070g7.4238.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:150720..150821 -
KK037250.1supercontigKK037250.1:149572..150255 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
Vocabulary: INTERPRO
TermDefinition
IPR029057PRTase-like
Homology
BLAST of EWM21924.1 vs. NCBI_GenBank
Match: gi|585102270|gb|EWM21924.1| (uracil phosphoribosyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 536.569 bits (1381), Expect = 0.000e+0
Identity = 261/261 (100.00%), Postives = 261/261 (100.00%), Query Frame = 0
Query:    1 MPSSATKRPTSPFPAKSCQEASDLPPSVHCSGHPLLHHKMTLLRDRKTTTRDFRHLMRELTLYLGYEATTEITLKPRVVEGSLGPVEGQKLSDKIAIVPILRGGLGMVDAMTEILPNAAVYHVGMFSNHRSLSLPIQYYNRLPKEKDKVADLTFVLDPLIATAGTCSATVSILKKWGTKKIIVIGVVGALQGLHKLTQAHPDIRVHVAAIDEAVSADGHILPGIGDASERLFNAHVGEPDDETSVLNLCATKKTKRSDNGC 261
            MPSSATKRPTSPFPAKSCQEASDLPPSVHCSGHPLLHHKMTLLRDRKTTTRDFRHLMRELTLYLGYEATTEITLKPRVVEGSLGPVEGQKLSDKIAIVPILRGGLGMVDAMTEILPNAAVYHVGMFSNHRSLSLPIQYYNRLPKEKDKVADLTFVLDPLIATAGTCSATVSILKKWGTKKIIVIGVVGALQGLHKLTQAHPDIRVHVAAIDEAVSADGHILPGIGDASERLFNAHVGEPDDETSVLNLCATKKTKRSDNGC
Sbjct:    1 MPSSATKRPTSPFPAKSCQEASDLPPSVHCSGHPLLHHKMTLLRDRKTTTRDFRHLMRELTLYLGYEATTEITLKPRVVEGSLGPVEGQKLSDKIAIVPILRGGLGMVDAMTEILPNAAVYHVGMFSNHRSLSLPIQYYNRLPKEKDKVADLTFVLDPLIATAGTCSATVSILKKWGTKKIIVIGVVGALQGLHKLTQAHPDIRVHVAAIDEAVSADGHILPGIGDASERLFNAHVGEPDDETSVLNLCATKKTKRSDNGC 261          
BLAST of EWM21924.1 vs. NCBI_GenBank
Match: gi|953502351|emb|CEG36537.1| (uracil phosphoribosyltransferase [Plasmopara halstedii])

HSP 1 Score: 226.098 bits (575), Expect = 1.126e-70
Identity = 108/219 (49.32%), Postives = 156/219 (71.23%), Query Frame = 0
Query:   28 VHCSGHPLLHHKMTLLRDRKTTTRDFRHLMRELTLYLGYEATTEITLKPRVVEGSLGPVEGQKLSDKIAIVPILRGGLGMVDAMTEILPNAAVYHVGMFSNHRSLSLPIQYYNRLPKEKDKVADLTFVLDPLIATAGTCSATVSILKKWGTKKIIVIGVVGALQGLHKLTQAHPDIRVHVAAIDEAVSADGHILPGIGDASERLFNAHVGEPDDETSVL 246
            V C+ HP+L HK+T LRD +T  R FR+L+RE+T YLGY+AT ++   P+ ++   G  +G +LS  +A+VPILR GLGMVD M +ILPNA+V+H+GM+ N +SL LP+QYYN+LPKE D   D+  +L+P+IATAGT  AT+++LK WG KKI V+  + + QGL ++   +P + + +AAID+ +S DG+ILPG+GDA +R F  H    + +T  L
Sbjct:   20 VWCATHPVLRHKLTKLRDERTDCRAFRYLLREVTFYLGYDATDDLETIPKQIKTPKGDHQGAELSTNVALVPILRAGLGMVDPMLDILPNASVHHIGMYRNKQSL-LPVQYYNKLPKECD--VDVAIILEPVIATAGTIVATLAVLKTWGVKKIKVVSAIASKQGLQEVCAKNPGVEIFLAAIDDELSEDGYILPGLGDAGDREF--HTSAQNGQTYFL 233          
BLAST of EWM21924.1 vs. NCBI_GenBank
Match: gi|695414834|ref|XP_009526406.1| (hypothetical protein PHYSODRAFT_544971, partial [Phytophthora sojae] >gi|348677531|gb|EGZ17348.1| hypothetical protein PHYSODRAFT_544971, partial [Phytophthora sojae])

HSP 1 Score: 225.713 bits (574), Expect = 1.132e-70
Identity = 104/206 (50.49%), Postives = 153/206 (74.27%), Query Frame = 0
Query:   28 VHCSGHPLLHHKMTLLRDRKTTTRDFRHLMRELTLYLGYEATTEITLKPRVVEGSLGPVEGQKLSDKIAIVPILRGGLGMVDAMTEILPNAAVYHVGMFSNHRSLSLPIQYYNRLPKEKDKVADLTFVLDPLIATAGTCSATVSILKKWGTKKIIVIGVVGALQGLHKLTQAHPDIRVHVAAIDEAVSADGHILPGIGDASERLFN 233
            V C+ HP+L HK+T LRD +T +R FRHL+RE+T YLGY+AT ++   P+ ++   G  +G +LS  +A+VPILR GLGMV+ M ++LPNA V+H+GM+ N +SL LP+QYYN+LPKE +  AD+  VL+P+IATAGT  AT+++LK WG +KI ++  + + QGL ++   +PD+ + +AAID+ +S DG+ILPG+GDA +R F 
Sbjct:   20 VWCAVHPVLRHKLTKLRDERTDSRVFRHLLREVTFYLGYDATDDLETVPKKIKTPKGEHQGAELSTSVALVPILRAGLGMVEPMLDVLPNATVHHIGMYRNKQSL-LPVQYYNKLPKECN--ADVAIVLEPVIATAGTILATLAVLKTWGVEKIKIVSAIASKQGLQEVCAKNPDVEIFLAAIDDDLSEDGYILPGLGDAGDREFQ 222          
BLAST of EWM21924.1 vs. NCBI_GenBank
Match: gi|567959916|gb|ETK85480.1| (uracil phosphoribosyltransferase [Phytophthora parasitica])

HSP 1 Score: 219.935 bits (559), Expect = 3.083e-68
Identity = 100/206 (48.54%), Postives = 153/206 (74.27%), Query Frame = 0
Query:   28 VHCSGHPLLHHKMTLLRDRKTTTRDFRHLMRELTLYLGYEATTEITLKPRVVEGSLGPVEGQKLSDKIAIVPILRGGLGMVDAMTEILPNAAVYHVGMFSNHRSLSLPIQYYNRLPKEKDKVADLTFVLDPLIATAGTCSATVSILKKWGTKKIIVIGVVGALQGLHKLTQAHPDIRVHVAAIDEAVSADGHILPGIGDASERLFN 233
            V C+ HP+L HK+T LRD +T +R FRHL+RE+T YLGY+AT ++   P+ ++   G  +G +LS  +A+VPILR GLGMV+ M ++LPNA+V+H+GM+ N +SL LP+QYYN+LPKE +   D+  +L+P+IATAGT  AT+++LK WG +KI ++  + + QGL ++   +PD+ + +AAID+ ++ DG+I+PG+GDA +R F 
Sbjct:   20 VWCAVHPVLRHKLTKLRDERTDSRVFRHLLREVTFYLGYDATDDLETVPKKIKTPKGDHKGAELSTSVALVPILRAGLGMVEPMLDLLPNASVHHLGMYRNKQSL-LPVQYYNKLPKECN--VDVAIILEPVIATAGTIIATLAVLKTWGVEKIKIVSAIASKQGLQEVCAKNPDVEIFLAAIDDDLTEDGYIMPGLGDAGDREFQ 222          
BLAST of EWM21924.1 vs. NCBI_GenBank
Match: gi|566022615|gb|ETI45526.1| (uracil phosphoribosyltransferase [Phytophthora parasitica P1569] >gi|567988604|gb|ETL38879.1| uracil phosphoribosyltransferase [Phytophthora parasitica] >gi|568017851|gb|ETL92028.1| uracil phosphoribosyltransferase [Phytophthora parasitica] >gi|568048266|gb|ETM45325.1| uracil phosphoribosyltransferase [Phytophthora parasitica] >gi|570326192|gb|ETO74140.1| uracil phosphoribosyltransferase [Phytophthora parasitica P1976] >gi|570950049|gb|ETP15306.1| uracil phosphoribosyltransferase [Phytophthora parasitica CJ01A1] >gi|570983579|gb|ETP43383.1| uracil phosphoribosyltransferase [Phytophthora parasitica P10297])

HSP 1 Score: 219.935 bits (559), Expect = 3.220e-68
Identity = 100/206 (48.54%), Postives = 153/206 (74.27%), Query Frame = 0
Query:   28 VHCSGHPLLHHKMTLLRDRKTTTRDFRHLMRELTLYLGYEATTEITLKPRVVEGSLGPVEGQKLSDKIAIVPILRGGLGMVDAMTEILPNAAVYHVGMFSNHRSLSLPIQYYNRLPKEKDKVADLTFVLDPLIATAGTCSATVSILKKWGTKKIIVIGVVGALQGLHKLTQAHPDIRVHVAAIDEAVSADGHILPGIGDASERLFN 233
            V C+ HP+L HK+T LRD +T +R FRHL+RE+T YLGY+AT ++   P+ ++   G  +G +LS  +A+VPILR GLGMV+ M ++LPNA+V+H+GM+ N +SL LP+QYYN+LPKE +   D+  +L+P+IATAGT  AT+++LK WG +KI ++  + + QGL ++   +PD+ + +AAID+ ++ DG+I+PG+GDA +R F 
Sbjct:   20 VWCAVHPVLRHKLTKLRDERTDSRVFRHLLREVTFYLGYDATDDLETVPKKIKTPKGDHKGAELSTSVALVPILRAGLGMVEPMLDLLPNASVHHLGMYRNKQSL-LPVQYYNKLPKECN--VDVAIILEPVIATAGTIIATLAVLKTWGVEKIKIVSAIASKQGLQEVCAKNPDVEIFLAAIDDDLTEDGYIMPGLGDAGDREFQ 222          
BLAST of EWM21924.1 vs. NCBI_GenBank
Match: gi|1173960704|gb|OQS06806.1| (uracil phosphoribosyltransferase [Thraustotheca clavata])

HSP 1 Score: 219.164 bits (557), Expect = 5.413e-68
Identity = 107/212 (50.47%), Postives = 151/212 (71.23%), Query Frame = 0
Query:   23 DLPPS--VHCSGHPLLHHKMTLLRDRKTTTRDFRHLMRELTLYLGYEATTEITLKPRVVEGSLGPVEGQKLSDKIAIVPILRGGLGMVDAMTEILPNAAVYHVGMFSNHRSLSLPIQYYNRLPKEKDKVADLTFVLDPLIATAGTCSATVSILKKWGTKKIIVIGVVGALQGLHKLTQAHPDIRVHVAAIDEAVSADGHILPGIGDASERLF 232
            +LP S  +  + HP+L HK+T LRD KT    FRHL+RE+T YLGYEAT ++ + P+ +   LGP +G +L+  +A+VPILR GLGMV+ M ++LPNA V+H+GM+ N  SL LP+QYYN+LPK+ +   D   VL+P+IATAGT  ATV+IL  WG  K+ +I  + +  GL +L + HP++ V VAAIDE +S +G+I+PG+GDA +R F
Sbjct:   10 NLPSSSKIIVATHPVLAHKLTKLRDSKTDANLFRHLLREITFYLGYEATHDLAVIPKNITTPLGPHQGAELATSVALVPILRAGLGMVEPMLDLLPNAVVHHIGMYRNKNSL-LPVQYYNKLPKDCN--IDTAIVLEPMIATAGTIIATVAILHVWGVSKVKIISTIASKSGLKELFEQHPNVEVIVAAIDENLSEEGYIVPGLGDAGDRQF 218          
BLAST of EWM21924.1 vs. NCBI_GenBank
Match: gi|813154005|ref|XP_012201305.1| (uracil phosphoribosyltransferase [Saprolegnia parasitica CBS 223.65] >gi|641533879|gb|KDO27845.1| uracil phosphoribosyltransferase [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 219.164 bits (557), Expect = 6.027e-68
Identity = 111/228 (48.68%), Postives = 158/228 (69.30%), Query Frame = 0
Query:   16 KSCQEASDL--PP--SVHCSGHPLLHHKMTLLRDRKTTTRDFRHLMRELTLYLGYEATTEITLKPRVVEGSLGPVEGQKLSDKIAIVPILRGGLGMVDAMTEILPNAAVYHVGMFSNHRSLSLPIQYYNRLPKEKDKVADLTFVLDPLIATAGTCSATVSILKKWGTKKIIVIGVVGALQGLHKLTQAHPDIRVHVAAIDEAVSADGHILPGIGDASERLFN--AHVG 237
            K C +A+ L  PP   V  + HP+L HK+T LRD KT    FRHL+RE+T YLGYEAT+++ + P+ +   LGP +G +L+  +A+VPILR GLGMV+ M ++LPNA V+H+GM+ N  SL LP+QYYN+LP + +   D+  +L+P+IATAGT  ATV++L  WG  +I +I  + +  GL +L   HP + V VAAIDE +S +G+I+PG+GDA +R F+  AH G
Sbjct:    2 KHCADAASLGLPPHSKVIVATHPVLAHKLTKLRDAKTDANLFRHLLREITFYLGYEATSDLAVIPKSITTPLGPHQGAELASVVALVPILRAGLGMVEPMLDLLPNARVHHIGMYRNKNSL-LPVQYYNKLPHDCN--VDVAIILEPVIATAGTIIATVAVLHAWGVNQIKIISSIASKNGLKELFAKHPGVEVIVAAIDETLSEEGYIVPGLGDAGDRQFDTVAHTG 226          
BLAST of EWM21924.1 vs. NCBI_GenBank
Match: gi|1173931037|gb|OQR83614.1| (uracil phosphoribosyltransferase [Achlya hypogyna])

HSP 1 Score: 218.394 bits (555), Expect = 1.005e-67
Identity = 107/222 (48.20%), Postives = 154/222 (69.37%), Query Frame = 0
Query:   16 KSCQEASDLPPSVH----CSGHPLLHHKMTLLRDRKTTTRDFRHLMRELTLYLGYEATTEITLKPRVVEGSLGPVEGQKLSDKIAIVPILRGGLGMVDAMTEILPNAAVYHVGMFSNHRSLSLPIQYYNRLPKEKDKVADLTFVLDPLIATAGTCSATVSILKKWGTKKIIVIGVVGALQGLHKLTQAHPDIRVHVAAIDEAVSADGHILPGIGDASERLFN 233
            K+C +A+ L    H     + HP+L HK+T LRD KT    FRHL+RE+T YLGYEAT ++ + P+ +   LGP +G +L+  +A+VPILR GLGMV+ M ++LPNA V+H+GM+ N  SL LP+QYYN+LPK+ +   D+  +L+P+IATAGT  ATV+IL  WG  ++ +I  + +  GL +L   HP + V VAAIDE +S +G+I+PG+GDA +R F+
Sbjct:    2 KNCADAASLGLPAHSKVVVATHPVLAHKLTKLRDAKTDANLFRHLLREITFYLGYEATGDLAVVPKSITTPLGPHQGAELATSVALVPILRAGLGMVEPMLDLLPNARVHHIGMYRNKNSL-LPVQYYNKLPKDCN--VDVAIILEPVIATAGTIIATVAILHVWGVSQVKIISTIASKAGLKELFAKHPSVEVIVAAIDENLSEEGYIVPGLGDAGDRQFD 220          
BLAST of EWM21924.1 vs. NCBI_GenBank
Match: gi|970645455|gb|KUF85926.1| (Uracil phosphoribosyltransferase [Phytophthora nicotianae])

HSP 1 Score: 218.394 bits (555), Expect = 1.369e-67
Identity = 99/206 (48.06%), Postives = 152/206 (73.79%), Query Frame = 0
Query:   28 VHCSGHPLLHHKMTLLRDRKTTTRDFRHLMRELTLYLGYEATTEITLKPRVVEGSLGPVEGQKLSDKIAIVPILRGGLGMVDAMTEILPNAAVYHVGMFSNHRSLSLPIQYYNRLPKEKDKVADLTFVLDPLIATAGTCSATVSILKKWGTKKIIVIGVVGALQGLHKLTQAHPDIRVHVAAIDEAVSADGHILPGIGDASERLFN 233
            V C+ HP+L HK+T LRD +T +R FRHL+RE+T YLGY+AT ++   P+ ++   G  +G +LS  +A+VPILR GLGMV+ M ++LPNA+V+H+GM+ N +SL LP+QYYN+LPKE +   D+  +L+P+IAT GT  AT+++LK WG +KI ++  + + QGL ++   +PD+ + +AAID+ ++ DG+I+PG+GDA +R F 
Sbjct:   20 VWCAVHPVLRHKLTKLRDERTDSRVFRHLLREVTFYLGYDATDDLETVPKKIKTPKGDHKGAELSTSVALVPILRAGLGMVEPMLDLLPNASVHHLGMYRNKQSL-LPVQYYNKLPKECN--VDVAIILEPVIATVGTIIATLAVLKTWGVEKIKIVSAIASKQGLQEVCAKNPDVEIFLAAIDDDLTEDGYIMPGLGDAGDREFQ 222          
BLAST of EWM21924.1 vs. NCBI_GenBank
Match: gi|669137424|ref|XP_008604280.1| (uracil phosphoribosyltransferase [Saprolegnia diclina VS20] >gi|530744615|gb|EQC42857.1| uracil phosphoribosyltransferase [Saprolegnia diclina VS20])

HSP 1 Score: 217.624 bits (553), Expect = 2.401e-67
Identity = 110/228 (48.25%), Postives = 157/228 (68.86%), Query Frame = 0
Query:   16 KSCQEASDL--PP--SVHCSGHPLLHHKMTLLRDRKTTTRDFRHLMRELTLYLGYEATTEITLKPRVVEGSLGPVEGQKLSDKIAIVPILRGGLGMVDAMTEILPNAAVYHVGMFSNHRSLSLPIQYYNRLPKEKDKVADLTFVLDPLIATAGTCSATVSILKKWGTKKIIVIGVVGALQGLHKLTQAHPDIRVHVAAIDEAVSADGHILPGIGDASERLFN--AHVG 237
            K C + + L  PP   V  + HP+L HK+T LRD KT    FRHL+RE+T YLGYEAT+++ + P+ +   LGP +G +L+  +A+VPILR GLGMV+ M ++LPNA V+H+GM+ N  SL LP+QYYN+LP + +   D+  +L+P+IATAGT  ATV++L  WG  +I +I  + +  GL +L   HP + V VAAIDE +S +G+I+PG+GDA +R F+  AH G
Sbjct:    2 KHCADVASLGLPPHSKVVVATHPVLAHKLTKLRDAKTDANLFRHLLREITFYLGYEATSDLAVIPKSITTPLGPHQGAELASVVALVPILRAGLGMVEPMLDLLPNARVHHIGMYRNKNSL-LPVQYYNKLPHDCN--VDVAIILEPVIATAGTIIATVAVLHAWGVNQIKIISSIASKNGLKELFAKHPGVEVIVAAIDETLSEEGYIVPGLGDAGDRQFDTVAHTG 226          
The following BLAST results are available for this feature:
BLAST of EWM21924.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102270|gb|EWM21924.1|0.000e+0100.00uracil phosphoribosyltransferase [Nannochloropsis ... [more]
gi|953502351|emb|CEG36537.1|1.126e-7049.32uracil phosphoribosyltransferase [Plasmopara halst... [more]
gi|695414834|ref|XP_009526406.1|1.132e-7050.49hypothetical protein PHYSODRAFT_544971, partial [P... [more]
gi|567959916|gb|ETK85480.1|3.083e-6848.54uracil phosphoribosyltransferase [Phytophthora par... [more]
gi|566022615|gb|ETI45526.1|3.220e-6848.54uracil phosphoribosyltransferase [Phytophthora par... [more]
gi|1173960704|gb|OQS06806.1|5.413e-6850.47uracil phosphoribosyltransferase [Thraustotheca cl... [more]
gi|813154005|ref|XP_012201305.1|6.027e-6848.68uracil phosphoribosyltransferase [Saprolegnia para... [more]
gi|1173931037|gb|OQR83614.1|1.005e-6748.20uracil phosphoribosyltransferase [Achlya hypogyna][more]
gi|970645455|gb|KUF85926.1|1.369e-6748.06Uracil phosphoribosyltransferase [Phytophthora nic... [more]
gi|669137424|ref|XP_008604280.1|2.401e-6748.25uracil phosphoribosyltransferase [Saprolegnia dicl... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8782rna8782Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications