EWM21932.1, cds8743 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM21932.1 vs. NCBI_GenBank
Match: gi|585102279|gb|EWM21932.1| (hypothetical protein Naga_100220g3 [Nannochloropsis gaditana]) HSP 1 Score: 1141.33 bits (2951), Expect = 0.000e+0 Identity = 553/553 (100.00%), Postives = 553/553 (100.00%), Query Frame = 0
Query: 1 MATDAGRVRPTSASSSVTNLSDSHAPITEEMDGTFLPATEVVEAEEQDVVGAWGRPISRFGFHRHGVYRRKPRLFPSSMVANAQRVESIFLRHYRENILDKIQGEKVEPMKPKRPVRRTAAAEAGDPAHCFNGDRNGTSPAPQAGHVLGRRGPALSDVEQAHLPEGQTDESEHTQQKASADLKELRRATRSTGRGIEDWIKIPVAATVRVPSGDLEKLDGMVYVSTDTGAFFRQQGGVYFETMWKGSVHKYFIPDSELPMVSEDHFLFKEERARIEEDRLKRLSQAKHMLELGCTNEEVTFDIEKKAADRTLESRKEELRERMLGRAEDILEELEEEVAITSLPLIRESSAHHKSLAWSGSTPATSQSPARVRARRRRSGSEFSDAETLVLEKEIKAAHKENNVPNRSTRMSSSRNLSASAEMGPSDSQQQPLFPALKSDVSKMDSSSEGRTDAQDVETECNLLKDENQAYESFCTNRISVIEESGPVTPPSKRQKINAADLAICTLAIASDISTGLRETGYVRDYEYVDIHEVVVDKMFPDADWGEDQDLIV 553
MATDAGRVRPTSASSSVTNLSDSHAPITEEMDGTFLPATEVVEAEEQDVVGAWGRPISRFGFHRHGVYRRKPRLFPSSMVANAQRVESIFLRHYRENILDKIQGEKVEPMKPKRPVRRTAAAEAGDPAHCFNGDRNGTSPAPQAGHVLGRRGPALSDVEQAHLPEGQTDESEHTQQKASADLKELRRATRSTGRGIEDWIKIPVAATVRVPSGDLEKLDGMVYVSTDTGAFFRQQGGVYFETMWKGSVHKYFIPDSELPMVSEDHFLFKEERARIEEDRLKRLSQAKHMLELGCTNEEVTFDIEKKAADRTLESRKEELRERMLGRAEDILEELEEEVAITSLPLIRESSAHHKSLAWSGSTPATSQSPARVRARRRRSGSEFSDAETLVLEKEIKAAHKENNVPNRSTRMSSSRNLSASAEMGPSDSQQQPLFPALKSDVSKMDSSSEGRTDAQDVETECNLLKDENQAYESFCTNRISVIEESGPVTPPSKRQKINAADLAICTLAIASDISTGLRETGYVRDYEYVDIHEVVVDKMFPDADWGEDQDLIV
Sbjct: 1 MATDAGRVRPTSASSSVTNLSDSHAPITEEMDGTFLPATEVVEAEEQDVVGAWGRPISRFGFHRHGVYRRKPRLFPSSMVANAQRVESIFLRHYRENILDKIQGEKVEPMKPKRPVRRTAAAEAGDPAHCFNGDRNGTSPAPQAGHVLGRRGPALSDVEQAHLPEGQTDESEHTQQKASADLKELRRATRSTGRGIEDWIKIPVAATVRVPSGDLEKLDGMVYVSTDTGAFFRQQGGVYFETMWKGSVHKYFIPDSELPMVSEDHFLFKEERARIEEDRLKRLSQAKHMLELGCTNEEVTFDIEKKAADRTLESRKEELRERMLGRAEDILEELEEEVAITSLPLIRESSAHHKSLAWSGSTPATSQSPARVRARRRRSGSEFSDAETLVLEKEIKAAHKENNVPNRSTRMSSSRNLSASAEMGPSDSQQQPLFPALKSDVSKMDSSSEGRTDAQDVETECNLLKDENQAYESFCTNRISVIEESGPVTPPSKRQKINAADLAICTLAIASDISTGLRETGYVRDYEYVDIHEVVVDKMFPDADWGEDQDLIV 553
BLAST of EWM21932.1 vs. NCBI_GenBank
Match: gi|553182016|ref|XP_005853663.1| (hypothetical protein NGA_0106502, partial [Nannochloropsis gaditana CCMP526] >gi|422295396|gb|EKU22695.1| hypothetical protein NGA_0106502, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 193.741 bits (491), Expect = 1.930e-56 Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0
Query: 243 MWKGSVHKYFIPDSELPMVSEDHFLFKEERARIEEDRLKRLSQAKHMLELGCTNEEVTFDIEKKAADRTLESRKEELRERMLGRAEDILEELEEE 337
MWKGSVHKYFIPDSELPMVSEDHFLFKEERARIEEDRLKRLSQAKHMLELGCTNEEVTFDIEKKAADRTLESRKEELRERMLGRAEDILEELEEE
Sbjct: 1 MWKGSVHKYFIPDSELPMVSEDHFLFKEERARIEEDRLKRLSQAKHMLELGCTNEEVTFDIEKKAADRTLESRKEELRERMLGRAEDILEELEEE 95
BLAST of EWM21932.1 vs. NCBI_GenBank
Match: gi|585102282|gb|EWM21935.1| (hypothetical protein Naga_100220g11 [Nannochloropsis gaditana]) HSP 1 Score: 80.1073 bits (196), Expect = 1.452e-12 Identity = 48/184 (26.09%), Postives = 95/184 (51.63%), Query Frame = 0
Query: 162 HLPEGQTDESEHTQQKASADLKELRRATRSTGRGIEDWIKIPVAATVRVPSGDLEKLDGMVYVSTDTGAFFRQQGGVYFETMWKGSVHKYFIPDSELPMVSEDHFLFKEERARIEEDRLKRLSQAKHMLELGCTNEEVTFDIE----KKAADRTLESRKEELRERMLGRAEDILEELEEEVAIT 341
++PE +S + S + K LRR+TR I+DWIKIPV + E ++G V++S+++G +++ G E + GS + Y +P+ LPM++ DH + E + + + K++ + +L N + ++E +K +R L + K + ++ +L +D+ + E +A+T
Sbjct: 74 NMPETGVKDSGRSDVCQSMNDKNLRRSTRCAHDKIDDWIKIPVEVPISDAGNRSELIEGSVFLSSESGQLYKKSGKACVEAAFNGSYYTYLVPEESLPMLTVDHPHYIAEVDMMNKSKEKQIEASAIFSKLLQVNVDAHHEMEMLMLEKEYERELLTLKNQSQDAILQVMKDVQDLGHESIAVT 257
BLAST of EWM21932.1 vs. NCBI_GenBank
Match: gi|553182018|ref|XP_005853664.1| (hypothetical protein NGA_0106602, partial [Nannochloropsis gaditana CCMP526] >gi|422295397|gb|EKU22696.1| hypothetical protein NGA_0106602, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 60.8474 bits (146), Expect = 9.919e-9 Identity = 29/29 (100.00%), Postives = 29/29 (100.00%), Query Frame = 0
Query: 79 MVANAQRVESIFLRHYRENILDKIQGEKV 107
MVANAQRVESIFLRHYRENILDKIQGEKV
Sbjct: 1 MVANAQRVESIFLRHYRENILDKIQGEKV 29 The following BLAST results are available for this feature:
BLAST of EWM21932.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 4
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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