EWM21938.1, cds8741 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21938.1 vs. NCBI_GenBank
Match: gi|585102285|gb|EWM21938.1| (mov34 mpn pad-1 family protein [Nannochloropsis gaditana]) HSP 1 Score: 776.163 bits (2003), Expect = 0.000e+0 Identity = 381/381 (100.00%), Postives = 381/381 (100.00%), Query Frame = 0 Query: 1 MSSSTEATAMEVGETEESGNTSTTGGSGLNAPTAAAQEERSVVLEEEAGNKSGRHVALHPLALVTICDHCTRVKVGGSLLPVTSRILGILFGVQNGLQVSITDAFELQYEITENGSVKIPAGYVNEKKELFGAVNQGAEVMGWYSVGEHVLPGDLEIHRAMTEWNESPFFLLLSPAASPGGDEGGAAPGVKEGELPARVFETELHMMRGVPSMLFVPVPFRLTAAEAERISVEHVVKAAPLEAASWVDLHVDVVKSSLSALVARVKAILRLLQAVKTGQAPPDRRLLRMVRALCDRLPAAGPSGDFQDALTGDYQDSLVITYLASITKLSSLSSDMRELEGVRVGMYNESAAKHERASPGGITKSPGSTRCYARDDSKVRT 381 MSSSTEATAMEVGETEESGNTSTTGGSGLNAPTAAAQEERSVVLEEEAGNKSGRHVALHPLALVTICDHCTRVKVGGSLLPVTSRILGILFGVQNGLQVSITDAFELQYEITENGSVKIPAGYVNEKKELFGAVNQGAEVMGWYSVGEHVLPGDLEIHRAMTEWNESPFFLLLSPAASPGGDEGGAAPGVKEGELPARVFETELHMMRGVPSMLFVPVPFRLTAAEAERISVEHVVKAAPLEAASWVDLHVDVVKSSLSALVARVKAILRLLQAVKTGQAPPDRRLLRMVRALCDRLPAAGPSGDFQDALTGDYQDSLVITYLASITKLSSLSSDMRELEGVRVGMYNESAAKHERASPGGITKSPGSTRCYARDDSKVRT Sbjct: 1 MSSSTEATAMEVGETEESGNTSTTGGSGLNAPTAAAQEERSVVLEEEAGNKSGRHVALHPLALVTICDHCTRVKVGGSLLPVTSRILGILFGVQNGLQVSITDAFELQYEITENGSVKIPAGYVNEKKELFGAVNQGAEVMGWYSVGEHVLPGDLEIHRAMTEWNESPFFLLLSPAASPGGDEGGAAPGVKEGELPARVFETELHMMRGVPSMLFVPVPFRLTAAEAERISVEHVVKAAPLEAASWVDLHVDVVKSSLSALVARVKAILRLLQAVKTGQAPPDRRLLRMVRALCDRLPAAGPSGDFQDALTGDYQDSLVITYLASITKLSSLSSDMRELEGVRVGMYNESAAKHERASPGGITKSPGSTRCYARDDSKVRT 381
BLAST of EWM21938.1 vs. NCBI_GenBank
Match: gi|695375588|ref|XP_009515578.1| (hypothetical protein PHYSODRAFT_353509 [Phytophthora sojae] >gi|348688489|gb|EGZ28303.1| hypothetical protein PHYSODRAFT_353509 [Phytophthora sojae]) HSP 1 Score: 237.654 bits (605), Expect = 2.848e-72 Identity = 117/300 (39.00%), Postives = 187/300 (62.33%), Query Frame = 0 Query: 33 TAAAQEERSVVLEEEAGNKSG-RHVALHPLALVTICDHCTRVKVGGSLLPVTS-RILGILFGVQNGLQVSITDAFELQYEITENGSVKIPAGYVNEKKELFGAVNQGAEVMGWYSVGEHVLPGDLEIHRAMTEWNESPFFLLLSPAASPGGDEGGAAPGVKEGELPARVFETELHMMRGVPSMLFVPVPFRLTAAEAERISVEHVVKAAPLEAASWVDLH--VDVVKSSLSALVARVKAILRLLQAVKTGQAPPDRRLLRMVRALCDRLPAAGPSGDFQDALTGDYQDSLVITYLASITK 328 +A Q+E +V E++G G R + +HPL +V + DH TR K L + +++G LFG+Q GL V + D+FE++Y++ +G ++I ++ + + F V G E++GWY+VG VLP DL +HR + E+NESP F++L P + P K+ +LP +FE+ELHM+ GVP M+FV PF++ +E E I+++H+ K AP+ AS LH + V+ ++ L +V +LR LQA+K G+AP D LLR + ++C++LPA S F A T +Y D+L+++YLA++TK Sbjct: 8 SAEQQDEEMLVQREDSGAGGGERQIQIHPLVIVNVADHQTRQKCNSQLSQTEAPQVIGALFGIQKGLDVDVYDSFEMKYDVGSSGEIQIDKEFLTSRIQQFSQVFPGFELLGWYTVGAKVLPSDLAVHRVVMEFNESPLFMILDPESK--------GPSTKK-KLPISLFESELHMLNGVPKMIFVKAPFKIDTSETEGIAIDHISKIAPIGDASKSTLHPYLGNVRDAVKMLDRQVDVLLRFLQAMKNGEAPLDHNLLRHISSICNQLPAM-TSEHFDAAFTQEYNDALLVSYLATLTK 297
BLAST of EWM21938.1 vs. NCBI_GenBank
Match: gi|568013231|gb|ETL87408.1| (hypothetical protein L917_13399 [Phytophthora parasitica]) HSP 1 Score: 232.646 bits (592), Expect = 2.875e-70 Identity = 115/302 (38.08%), Postives = 188/302 (62.25%), Query Frame = 0 Query: 33 TAAAQEERSVVLEEEAGNKSG---RHVALHPLALVTICDHCTRVKVGGSLLPVTS-RILGILFGVQNGLQVSITDAFELQYEITENGSVKIPAGYVNEKKELFGAVNQGAEVMGWYSVGEHVLPGDLEIHRAMTEWNESPFFLLLSPAASPGGDEGGAAPGVKEGELPARVFETELHMMRGVPSMLFVPVPFRLTAAEAERISVEHVVKAAPLEAASWVDLH--VDVVKSSLSALVARVKAILRLLQAVKTGQAPPDRRLLRMVRALCDRLPAAGPSGDFQDALTGDYQDSLVITYLASITK 328 T+ +++ ++++ E G SG R + +HPL +V + DH TR K L + +++G LFG+Q GL V + D+FE++Y++ +G ++I ++ + + F V G E++GWY+VG LP DL +HR + E+NESP F++L P + P K+ +LP +FE+ELHM+ GVP M+FV PF++ +E E I+++H+ K AP+ AS LH + V+ ++ L +V +LRLLQA+K G+AP D LLR + ++C++LPA S F A T +Y D+L+++YLA++TK Sbjct: 7 TSTEEKDEEMLVQREDGGASGGGERQIQIHPLVIVNVADHQTRQKCNSQLSQTEAPQVIGALFGIQKGLDVDVYDSFEMKYDVV-SGEIQIDKEFLTSRIQQFSQVFPGFELLGWYTVGAKALPSDLAVHRVVMEFNESPLFIILDPESK--------GPSTKK-KLPISLFESELHMLNGVPKMIFVKAPFKIETSETEGIAIDHISKIAPIGDASKSSLHPYLGNVRDAVKMLDRQVDVLLRLLQAMKIGEAPQDHNLLRHISSICNQLPAM-KSEHFDAAFTQEYNDALLVSYLAALTK 297
BLAST of EWM21938.1 vs. NCBI_GenBank
Match: gi|566017699|gb|ETI40610.1| (hypothetical protein F443_14049 [Phytophthora parasitica P1569] >gi|567983744|gb|ETL34130.1| hypothetical protein L916_13591 [Phytophthora parasitica] >gi|568043338|gb|ETM40631.1| hypothetical protein L914_13486 [Phytophthora parasitica] >gi|570976785|gb|ETP38532.1| hypothetical protein F442_13890 [Phytophthora parasitica P10297]) HSP 1 Score: 231.876 bits (590), Expect = 5.548e-70 Identity = 115/302 (38.08%), Postives = 188/302 (62.25%), Query Frame = 0 Query: 33 TAAAQEERSVVLEEEAGNKSG---RHVALHPLALVTICDHCTRVKVGGSLLPVTS-RILGILFGVQNGLQVSITDAFELQYEITENGSVKIPAGYVNEKKELFGAVNQGAEVMGWYSVGEHVLPGDLEIHRAMTEWNESPFFLLLSPAASPGGDEGGAAPGVKEGELPARVFETELHMMRGVPSMLFVPVPFRLTAAEAERISVEHVVKAAPLEAASWVDLH--VDVVKSSLSALVARVKAILRLLQAVKTGQAPPDRRLLRMVRALCDRLPAAGPSGDFQDALTGDYQDSLVITYLASITK 328 T+ +++ ++++ E G SG R + +HPL +V + DH TR K L + +++G LFG+Q GL V + D+FE++Y++ +G ++I ++ + + F V G E++GWY+VG LP DL +HR + E+NESP F++L P + P K+ +LP +FE+ELHM+ GVP M+FV PF++ +E E I+++H+ K AP+ AS LH + V+ ++ L +V +LRLLQA+K G+AP D LLR + ++C++LPA S F A T +Y D+L+++YLA++TK Sbjct: 7 TSTEEKDEEMLVQREDGGASGGGERQIQIHPLVIVNVADHQTRQKCNSQLSQTEAPQVIGALFGIQKGLDVDVYDSFEMKYDVV-SGEIQIDKEFLTSRIQQFSQVFPGFELLGWYTVGAKALPSDLAVHRVVMEFNESPLFMILDPESK--------GPSTKK-KLPISLFESELHMLNGVPKMIFVKAPFKIETSETEGIAIDHISKIAPIGDASKSSLHPYLGNVRDAVKMLDRQVDVLLRLLQAMKIGEAPLDHNLLRHISSICNQLPAM-KSEHFDAAFTQEYNDALLVSYLAALTK 297
BLAST of EWM21938.1 vs. NCBI_GenBank
Match: gi|675201263|ref|XP_008909516.1| (hypothetical protein PPTG_14750 [Phytophthora parasitica INRA-310] >gi|568090211|gb|ETN05046.1| hypothetical protein PPTG_14750 [Phytophthora parasitica INRA-310] >gi|570321359|gb|ETO69307.1| hypothetical protein F444_14079 [Phytophthora parasitica P1976] >gi|970665599|gb|KUG02204.1| COP9 signalosome complex subunit 6a [Phytophthora nicotianae]) HSP 1 Score: 231.491 bits (589), Expect = 6.048e-70 Identity = 115/302 (38.08%), Postives = 188/302 (62.25%), Query Frame = 0 Query: 33 TAAAQEERSVVLEEEAGNKSG---RHVALHPLALVTICDHCTRVKVGGSLLPVTS-RILGILFGVQNGLQVSITDAFELQYEITENGSVKIPAGYVNEKKELFGAVNQGAEVMGWYSVGEHVLPGDLEIHRAMTEWNESPFFLLLSPAASPGGDEGGAAPGVKEGELPARVFETELHMMRGVPSMLFVPVPFRLTAAEAERISVEHVVKAAPLEAASWVDLH--VDVVKSSLSALVARVKAILRLLQAVKTGQAPPDRRLLRMVRALCDRLPAAGPSGDFQDALTGDYQDSLVITYLASITK 328 T+ +++ ++++ E G SG R + +HPL +V + DH TR K L + +++G LFG+Q GL V + D+FE++Y++ +G ++I ++ + + F V G E++GWY+VG LP DL +HR + E+NESP F++L P + P K+ +LP +FE+ELHM+ GVP M+FV PF++ +E E I+++H+ K AP+ AS LH + V+ ++ L +V +LRLLQA+K G+AP D LLR + ++C++LPA S F A T +Y D+L+++YLA++TK Sbjct: 7 TSTEEKDEEMLVQREDGGASGGGERQIQIHPLVIVNVADHQTRQKCNSQLSQTEAPQVIGALFGIQKGLDVDVYDSFEMKYDVV-SGEIQIDKEFLTSRIQQFSQVFPGFELLGWYTVGAKALPSDLAVHRVVMEFNESPLFIILDPESK--------GPSTKK-KLPISLFESELHMLNGVPKMIFVKAPFKIETSETEGIAIDHISKIAPIGDASKSSLHPYLGNVRDAVKMLDRQVDVLLRLLQAMKIGEAPLDHNLLRHISSICNQLPAM-KSEHFDAAFTQEYNDALLVSYLAALTK 297
BLAST of EWM21938.1 vs. NCBI_GenBank
Match: gi|567955075|gb|ETK80708.1| (hypothetical protein L915_13691 [Phytophthora parasitica] >gi|570945123|gb|ETP10380.1| hypothetical protein F441_13976 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 228.794 bits (582), Expect = 7.443e-69 Identity = 114/302 (37.75%), Postives = 187/302 (61.92%), Query Frame = 0 Query: 33 TAAAQEERSVVLEEEAGNKSG---RHVALHPLALVTICDHCTRVKVGGSLLPVTS-RILGILFGVQNGLQVSITDAFELQYEITENGSVKIPAGYVNEKKELFGAVNQGAEVMGWYSVGEHVLPGDLEIHRAMTEWNESPFFLLLSPAASPGGDEGGAAPGVKEGELPARVFETELHMMRGVPSMLFVPVPFRLTAAEAERISVEHVVKAAPLEAASWVDLH--VDVVKSSLSALVARVKAILRLLQAVKTGQAPPDRRLLRMVRALCDRLPAAGPSGDFQDALTGDYQDSLVITYLASITK 328 T+ +++ ++++ E G SG R + +HPL +V + DH TR K L + +++G LFG+Q GL V + D+FE++Y++ +G ++I ++ + + F V G E++GWY+VG LP DL +HR + E+NESP ++L P + P K+ +LP +FE+ELHM+ GVP M+FV PF++ +E E I+++H+ K AP+ AS LH + V+ ++ L +V +LRLLQA+K G+AP D LLR + ++C++LPA S F A T +Y D+L+++YLA++TK Sbjct: 7 TSTEEKDEEMLVQREDGGASGGGERQIQIHPLVIVNVADHQTRQKCNSQLSQTEAPQVIGALFGIQKGLDVDVYDSFEMKYDVV-SGEIQIDKEFLTSRIQQFSQVFPGFELLGWYTVGAKALPSDLAVHRVVMEFNESPLLIILDPESK--------GPSTKK-KLPISLFESELHMLNGVPKMIFVKAPFKIETSETEGIAIDHISKIAPIGDASKSSLHPYLGNVRDAVKMLDRQVDVLLRLLQAMKIGEAPLDHNLLRHISSICNQLPAM-KSEHFDAAFTQEYNDALLVSYLAALTK 297
BLAST of EWM21938.1 vs. NCBI_GenBank
Match: gi|301117598|ref|XP_002906527.1| (COP9 signalosome complex subunit, putative [Phytophthora infestans T30-4] >gi|262107876|gb|EEY65928.1| COP9 signalosome complex subunit, putative [Phytophthora infestans T30-4]) HSP 1 Score: 228.409 bits (581), Expect = 1.017e-68 Identity = 114/301 (37.87%), Postives = 184/301 (61.13%), Query Frame = 0 Query: 33 TAAAQEERSVVLEEEAGNKSG--RHVALHPLALVTICDHCTRVKVGGSLLPVTS-RILGILFGVQNGLQVSITDAFELQYEITENGSVKIPAGYVNEKKELFGAVNQGAEVMGWYSVGEHVLPGDLEIHRAMTEWNESPFFLLLSPAASPGGDEGGAAPGVKEGELPARVFETELHMMRGVPSMLFVPVPFRLTAAEAERISVEHVVKAAPLEAASWVDLH--VDVVKSSLSALVARVKAILRLLQAVKTGQAPPDRRLLRMVRALCDRLPAAGPSGDFQDALTGDYQDSLVITYLASITK 328 +A ++E +V E++G G R + +HPL +V I DH TR K L + +++G LFG+Q GL V + D+FE++Y++ NG ++I ++ + + F V G E++GWY+VG LP DL +HR + E+NESP F++L P + P K+ +LP +FE+ELHM+ GVP M+FV PF++ +E E I+++H+ K AP+ AS LH + V+ ++ L +V +LR LQ +K G+AP + LLR + ++C++LPA S F A +Y D+L+++YLA++TK Sbjct: 8 SAEEKDEEMLVQREDSGASGGGERQIQIHPLVIVNIADHQTRQKCNSQLSQTEAPQVIGALFGIQKGLDVDVYDSFEMKYDVC-NGDIQIDKEFLTSRIQQFSQVFPGFELLGWYTVGAKALPSDLAVHRVVMEFNESPLFMILDPESK--------GPSTKK-KLPISLFESELHMLNGVPKMIFVKAPFKIETSETEGIAIDHISKIAPVGDASKSSLHPYLGNVRDAVKMLDRQVDVLLRFLQTMKNGEAPLNHNLLRHISSICNQLPAM-KSEHFDTAFAQEYNDALLVSYLAALTK 297
BLAST of EWM21938.1 vs. NCBI_GenBank
Match: gi|1214713335|gb|OWZ24232.1| (COP9 signalosome complex subunit [Phytophthora megakarya]) HSP 1 Score: 227.639 bits (579), Expect = 2.287e-68 Identity = 115/303 (37.95%), Postives = 187/303 (61.72%), Query Frame = 0 Query: 34 AAAQEERSVVLEEEAGNKSG-RHVALHPLALVTICDHCTRVKVGGSLLPVTSRILGILFGVQNGLQVSITDAFELQYEITENGSVKIPAGYVNEKKELFGAVNQGAEVMGWYSVGEHVLPGDLEIHRAMTEWNESPFFLLLSPAASPGGDEGGAAPGVKEGELPARVFETELHMMRGVPSMLFVPVPFRLTAAEAERISVEHVVKAAPLEAASWVDLH-------VDVVKSSLSALVARVKAILRLLQAVKTGQAPPDRRLLRMVRALCDRLPAAGPSGDFQDALTGDYQDSLVITYLASITK 328 +A ++E +V EE+G G R + +HPL +V I DH TR ++ + P +++G LFG+Q GL V++ D+FE++Y++ NG ++I ++ + + F V G E++GWY+VG LP DL +HR + E+NESP F++L P + P K+ +LP +FE+ELH++ GVP M+FV PF++ +E E I+++H+ K AP+ AS LH + V+ ++ L +V +L LQA+K G+AP D LLR + ++C++LPA S F A T +Y D+L+++YLA++TK Sbjct: 8 SAEKDEEMLVQREESGAGGGERQIQIHPLVIVNIADHQTRQQLSQTEAP---QVIGALFGIQKGLDVAVYDSFEMKYDVA-NGEIQIDKEFLTSRIQQFSQVFPGFELLGWYTVGAKALPSDLAVHRVVMEFNESPLFMILDPESK--------GPSTKK-KLPISLFESELHVLNGVPKMIFVKAPFKIETSETEGIAIDHISKIAPIGDASKSTLHPYLVHPYLGNVRDAVKMLDRQVDVLLHFLQAMKNGEAPLDHNLLRHISSICNQLPAMK-SEHFDAAFTQEYNDALLVSYLATLTK 296
BLAST of EWM21938.1 vs. NCBI_GenBank
Match: gi|953489673|emb|CEG47039.1| (cop9 signalosome complex subunit 6a-like [Plasmopara halstedii]) HSP 1 Score: 215.312 bits (547), Expect = 1.273e-63 Identity = 109/301 (36.21%), Postives = 181/301 (60.13%), Query Frame = 0 Query: 33 TAAAQEERSVVLEEEAGNKSG--RHVALHPLALVTICDHCTRVKVGGSLLPVTS-RILGILFGVQNGLQVSITDAFELQYEITENGSVKIPAGYVNEKKELFGAVNQGAEVMGWYSVGEHVLPGDLEIHRAMTEWNESPFFLLLSPAASPGGDEGGAAPGVKEGELPARVFETELHMMRGVPSMLFVPVPFRLTAAEAERISVEHVVKAAPLEAASWVDLH--VDVVKSSLSALVARVKAILRLLQAVKTGQAPPDRRLLRMVRALCDRLPAAGPSGDFQDALTGDYQDSLVITYLASITK 328 T+ ++E +V E++G G RH+ +HPL +V I DH R K L + +++G LFG+Q GL V + D+FE++ ++ +NG ++I ++ + + F V G E++GWY++G+ L DL +HR + E+NESP F++L+P + +LP +FE+ELHM+ GVP M+FV PF++ +E E I+++H+ K AP+ S LH + V+ ++ L +V +LR L A+K G+AP D LLR + ++C++LPA S F A +Y D+L+++YLA++TK Sbjct: 7 TSFEEDEGMLVQREDSGATGGGERHIQIHPLVIVNITDHHARQKCYSQLSQSGALQVIGALFGIQRGLDVDVYDSFEMKVDV-DNGEIQIDKEFLTSRIQQFSQVFPGFELLGWYTIGDKALSIDLAVHRVVMEFNESPLFMILNPNILGSN---------TKKKLPISLFESELHMLNGVPKMIFVKAPFKIETSETEGIAIDHISKIAPIADGSKSSLHPYLGNVRDAVKMLDRQVDGLLRFLYAMKNGEAPLDHNLLRHISSICNQLPAM-KSKRFDAAFAQEYNDALLVSYLATLTK 296
BLAST of EWM21938.1 vs. NCBI_GenBank
Match: gi|299469829|emb|CBN76683.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 211.846 bits (538), Expect = 2.445e-62 Identity = 110/286 (38.46%), Postives = 161/286 (56.29%), Query Frame = 0 Query: 51 KSGRHVALHPLALVTICDHCTRVKVGGSLLPVTSRILGILFGVQNGLQVSITDAFELQYEITENGSVKIPAGYVNEKKELFGAVNQGAEVMGWYSVGEHVLPGDLEIHRAMTEWNESPFFLLLSPAASPGGDEGGAAPGVKEGELPARVFETELHMMRGVPSMLFVPVPFRLTAAEAERISVEHVVKAAPLEAASWVDLHVDVVKSSLSALVARVKAILRLLQAVKTGQAPPDRRLLRMVRALCDRLPAAGPSGDFQDALTGDYQDSLVITYLASITKLSSLSSDM 336 K G ++ LHPL ++TI DH TRV GG R++G+LFG QNG VSI DA E+ +++ V ++K L+ AV E++GWY+VG V DL I R MT++N SP FLL++P+ + G ELP + E+E HM+ GV FV + F+L +AE+ISVEHV KA P + S +DLH V +SL L+AR++ + R L+ K G D LLR + ++C++LP F + ++ DSL + YLAS+ K + +D+ Sbjct: 31 KKGNNIMLHPLTVITISDHHTRVSTGGGAQEAGGRVIGLLFGSQNGRDVSIYDAMEVACTAVGANGLELNEALVEKQKNLYTAVYPMYEILGWYTVGTEVTELDLGIQRQMTKFNSSPLFLLMNPSPAQGSK-----------ELPVLIHESESHMLDGVAQSTFVQLAFQLETTQAEQISVEHVAKATPTDGISSIDLHAGAVSTSLRTLLARIEILRRFLEETKKGNISVDYPLLRQISSICNQLPTM-DGAQFSEEFMREFNDSLSVAYLASVQKSAGSMNDL 304 The following BLAST results are available for this feature:
BLAST of EWM21938.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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