EWM21933.1, cds8737 (CDS) Nannochloropsis gaditana

Overview
NameEWM21933.1
Unique Namecds8737
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037250.1:119210..119315 +
Alignment locationKK037250.1:119464..119666 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM21933.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100220g10.7208.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:119210..119315 +
KK037250.1supercontigKK037250.1:119464..119666 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM21933.1 vs. NCBI_GenBank
Match: gi|585102280|gb|EWM21933.1| (hypothetical protein Naga_100220g10 [Nannochloropsis gaditana])

HSP 1 Score: 214.927 bits (546), Expect = 9.095e-71
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0 
Query:    1 MSKKPRNQIPNGCHSLLDNRILFSTTASTCSFCTTYRTCLASHILKEIPIMGSDYELISRAFMLLYLKQSSNCEMLTVWVHFTMWYCRKTKFLMCGVPLDPV 102
            MSKKPRNQIPNGCHSLLDNRILFSTTASTCSFCTTYRTCLASHILKEIPIMGSDYELISRAFMLLYLKQSSNCEMLTVWVHFTMWYCRKTKFLMCGVPLDPV
Sbjct:    1 MSKKPRNQIPNGCHSLLDNRILFSTTASTCSFCTTYRTCLASHILKEIPIMGSDYELISRAFMLLYLKQSSNCEMLTVWVHFTMWYCRKTKFLMCGVPLDPV 102
The following BLAST results are available for this feature:
BLAST of EWM21933.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585102280|gb|EWM21933.1|9.095e-71100.00hypothetical protein Naga_100220g10 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8767rna8767Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications