EWM21953.1, cds8726 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM21953.1 vs. NCBI_GenBank
Match: gi|585102305|gb|EWM21953.1| (mitochondrial carrier protein [Nannochloropsis gaditana]) HSP 1 Score: 783.097 bits (2021), Expect = 0.000e+0 Identity = 384/384 (100.00%), Postives = 384/384 (100.00%), Query Frame = 0
Query: 1 MSSTVADGGGQGASKDSPFHNTSVAGRATSQMLERRGETDAVEERGPMEDPLCMTTSLGNTREGFLGFASGLVAGIIGVLTGYPLDTLKVKMQVYGSGSRVALLDENTGRNPVRIVRQLFRGVLPPLLSTGLVQTLNFGVYDNTLRYLRVGREEQKRQAGRQSRGLEEREEGSASYHGPNVLPDFFLAGAVGGAAISIITCPASLIKIQVQTASSSSVTYWTVLAGMRRKGLVAGYYRAFVPDVLNQMVGRGVYMCTYEALKRLLHPSPPPTPGTVHEPPSRLHHQAQPLYQRILAGALAGVCGWLCIYPLDVVKSRLQADALAPGANRYTTMTDCFRQSYRAGGLRSLYSGLGYTLLRAVPVASVILPCYDATYHVLARHLDE 384
MSSTVADGGGQGASKDSPFHNTSVAGRATSQMLERRGETDAVEERGPMEDPLCMTTSLGNTREGFLGFASGLVAGIIGVLTGYPLDTLKVKMQVYGSGSRVALLDENTGRNPVRIVRQLFRGVLPPLLSTGLVQTLNFGVYDNTLRYLRVGREEQKRQAGRQSRGLEEREEGSASYHGPNVLPDFFLAGAVGGAAISIITCPASLIKIQVQTASSSSVTYWTVLAGMRRKGLVAGYYRAFVPDVLNQMVGRGVYMCTYEALKRLLHPSPPPTPGTVHEPPSRLHHQAQPLYQRILAGALAGVCGWLCIYPLDVVKSRLQADALAPGANRYTTMTDCFRQSYRAGGLRSLYSGLGYTLLRAVPVASVILPCYDATYHVLARHLDE
Sbjct: 1 MSSTVADGGGQGASKDSPFHNTSVAGRATSQMLERRGETDAVEERGPMEDPLCMTTSLGNTREGFLGFASGLVAGIIGVLTGYPLDTLKVKMQVYGSGSRVALLDENTGRNPVRIVRQLFRGVLPPLLSTGLVQTLNFGVYDNTLRYLRVGREEQKRQAGRQSRGLEEREEGSASYHGPNVLPDFFLAGAVGGAAISIITCPASLIKIQVQTASSSSVTYWTVLAGMRRKGLVAGYYRAFVPDVLNQMVGRGVYMCTYEALKRLLHPSPPPTPGTVHEPPSRLHHQAQPLYQRILAGALAGVCGWLCIYPLDVVKSRLQADALAPGANRYTTMTDCFRQSYRAGGLRSLYSGLGYTLLRAVPVASVILPCYDATYHVLARHLDE 384
BLAST of EWM21953.1 vs. NCBI_GenBank
Match: gi|553179862|ref|XP_005852775.1| (mitochondrial carnitine acylcarnitine carrier protein [Nannochloropsis gaditana CCMP526] >gi|422295758|gb|EKU23057.1| mitochondrial carnitine acylcarnitine carrier protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 478.019 bits (1229), Expect = 4.289e-168 Identity = 235/238 (98.74%), Postives = 238/238 (100.00%), Query Frame = 0
Query: 1 MSSTVADGGGQGASKDSPFHNTSVAGRATSQMLERRGETDAVEERGPMEDPLCMTTSLGNTREGFLGFASGLVAGIIGVLTGYPLDTLKVKMQVYGSGSRVALLDENTGRNPVRIVRQLFRGVLPPLLSTGLVQTLNFGVYDNTLRYLRVGREEQKRQAGRQSRGLEEREEGSASYHGPNVLPDFFLAGAVGGAAISIITCPASLIKIQVQTASSSSVTYWTVLAGMRRKGLVAGYYR 238
MSSTVADGGGQGASKDSPFHNTSVAGRATSQMLERRGETDAVEERGPMEDPLCMTTSLGNTREGFLGFASGLVAGIIGVLTGYPLDTLKVKMQVYGSGSRVALLDENTGRNPVRIVRQLFRGVLPPLLSTGLVQTLNFGVYDNTLRYLRVGREEQKRQAGRQSRGLEEREEGSASYHGPNVLPDFF+AGAVGGAAISIITCPASL+KIQVQTA+SSSVTYWTVLAGMRRKGLVAGYYR
Sbjct: 1 MSSTVADGGGQGASKDSPFHNTSVAGRATSQMLERRGETDAVEERGPMEDPLCMTTSLGNTREGFLGFASGLVAGIIGVLTGYPLDTLKVKMQVYGSGSRVALLDENTGRNPVRIVRQLFRGVLPPLLSTGLVQTLNFGVYDNTLRYLRVGREEQKRQAGRQSRGLEEREEGSASYHGPNVLPDFFIAGAVGGAAISIITCPASLVKIQVQTATSSSVTYWTVLAGMRRKGLVAGYYR 238
BLAST of EWM21953.1 vs. NCBI_GenBank
Match: gi|551637736|ref|XP_005821685.1| (hypothetical protein GUITHDRAFT_147022 [Guillardia theta CCMP2712] >gi|428165716|gb|EKX34705.1| hypothetical protein GUITHDRAFT_147022 [Guillardia theta CCMP2712]) HSP 1 Score: 159.073 bits (401), Expect = 4.123e-42 Identity = 105/317 (33.12%), Postives = 159/317 (50.16%), Query Frame = 0
Query: 70 SGLVAGIIGVLTGYPLDTLKVKMQVYGSGSRVALLDENTGRNPVRIVRQLFRGVLPPLLSTGLVQTLNFGVYDNTLRYLRVGREEQKRQAGRQSRGLEEREEGSASYHGPNVLPDF--FLAGAVGGAAISIITCPASLIKIQVQTASSSSVTYWTVLAGMRRKGLVAGYYRAFVPDVLNQMVGRGVYMCTYEALKRLLHPSPPPTPGTVHEPPSRLHHQAQPLYQRILAGALAGVCGWLCIYPLDVVKSRLQA------DALAPGANRYTTMTDCFRQSYRAGGLRSLYSGLGYTLLRAVPVASVILPCYDATYHVL 378
SG AG +GVL G P DTLKV++QV G+ S + R+ V+ + +RG PP++S+GLV +LNF ++ R RE+ R P F +++G G +++ITCP+ IKI +Q A + L + + + G YR + + + GRG YM TYE +KR L +P G + L++R+LAGA AG+ GW IYPLDV++SR+ A + LA ++ DC ++Y GG+ + G+G++L+RA PVA+ +LP YD Y L
Sbjct: 31 SGATAGAVGVLVGQPFDTLKVRLQVSGAKS----VASTETRSFVKTLAMYYRGSGPPVISSGLVSSLNFTGFEAIKRLFH--REDMHRA------------------------PLFVHWVSGFGGAIPVTVITCPSQNIKI-LQQAGEERLGMIECLRKIFKTSGLRGLYRGYCIHSILETFGRGWYMVTYETVKRRLDDTPEVLGGQIS------------LHRRMLAGACAGMAGWSSIYPLDVIRSRIMAQPLTEKEKLANPKMLFSNSLDCIMKTYSEGGIPIFFRGIGFSLVRAAPVAACVLPTYDLAYSWL 304
BLAST of EWM21953.1 vs. NCBI_GenBank
Match: gi|873228355|emb|CEM16029.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 159.073 bits (401), Expect = 3.425e-41 Identity = 115/361 (31.86%), Postives = 168/361 (46.54%), Query Frame = 0
Query: 63 EGFLGFASGLVAGIIGVLTGYPLDTLKVKMQVYGSGSRVALLDENTGRNPVRIVRQLFRGVLPPLLSTGLVQTLNFGVYDNTLRYLRVGREEQKRQAGRQSRGLEEREEGSA-SYHGPNVLP--DFFLAGAVGGAAISIITCPASLIKIQVQTASSSSVTYWTVLAGMRRKGLVAGYYRAFVPDVLNQMVGRGVYMCTYEALKRLLHPSPPPTPGTVHEPPSRLHHQAQP---LYQRILAGALAGVCGWLCIYPLDVVKSRLQADALAPGANR-------------------------------------YTTMTDCFRQSYRAGGLRSLYSGLGYTLLRAVPVASVILPCYDATYHVLAR 380
E + F SG VAG+ G++ +P DTLK ++Q+ + S + P R + L+ GV PPLL G++Q+ FG +++ Y + E QA R GS Y VL F++G+ G S+ITCP+ ++K+Q Q S +T V+ + RKG + +R + + ++ GRG Y Y+ +KR LH + PS P Y+R AG AG+ GWL ++P DV+KSRLQA L GA R Y C R++++ GG+R+ Y GLG+TL RA PVA V+LP YD T+ L R
Sbjct: 48 EKSISFISGWVAGLSGIVVAHPFDTLKTRLQIGRTSSHHHF--RLSSLTP-RYITTLYAGVGPPLLVAGILQSCLFGSFNHFKGYFQGLAEPHVAQA---------RALGSTYGYVKVAVLSGLSVFVSGSCAGLCTSVITCPSGMVKVQQQC--SPDLTMLQVIKALIRKGGLPLIFRGYSAHIFMEIFGRGTYFTVYDVVKRELHQTTQSPSPAPSPTPSTPPPSPPPSMPYYKRAAAGMCAGIAGWLVVFPFDVLKSRLQAQPLFEGAARIPSGPQTHLSDPYAFDTSGRRTTERATGHRGWAAPKKYEGFWHCARETWKEGGVRAFYRGLGFTLARAAPVACVVLPVYDVTHETLLR 394
BLAST of EWM21953.1 vs. NCBI_GenBank
Match: gi|345490788|ref|XP_001601469.2| (PREDICTED: solute carrier family 25 member 45 isoform X2 [Nasonia vitripennis]) HSP 1 Score: 150.599 bits (379), Expect = 6.420e-39 Identity = 99/334 (29.64%), Postives = 161/334 (48.20%), Query Frame = 0
Query: 63 EGFLGFASGLVAGIIGVLTGYPLDTLKVKMQV----YGSGSRVALLDENTGRNPVRIVRQLFRGVLPPLLSTGLVQTLNFGVYDNTLRYLRVGREEQKRQAGRQSRGLEEREEGSASYHGPNVLPDFFLAGAVGGAAISIITCPASLIKIQVQT--------ASSSSVTYWTVLAGMRRKGLVAGYYRAFVPDVLNQMVGRGVYMCTYEALKRLLHPSPPPTPGTVHEPPSRLHHQAQPLYQRILAGALAGVCGWLCIYPLDVVKSRLQADALAPGANRYTTMTDCFRQSYRAGGLRSLYSGLGYTLLRAVPVASVILPCYDATYHVLARHLDE 384
E F F +G AGI GVL G+P+DT+K Q+ + V L+ + G+ L++G+L PL+ +G + ++ FGVYD LR+L Q+ R + + G L D F+AG +GG A ++ITCP+ LIKI++Q + +++ + VL + R+ + G++ FVP V +G G Y+ +Y+ + +H P+PG L++ ++AG LAG+ W+ + P D +KSR+QAD Y M DC YR + G +R++PV I+ Y+ L +H D+
Sbjct: 2 ENFRHFIAGWGAGIFGVLIGHPMDTIKTHQQMCNHKLSTKDAVKLIIKRDGK------LGLYKGMLFPLVCSGCLNSIYFGVYDIFLRHL---------QSLRGNSKVLPTNTGW--------LQDLFIAGIIGGTAQALITCPSELIKIKMQVGKGLCKSKVTRRNLSTFRVLVDIYRQNGIRGFFVGFVPTVWRDALGGGAYILSYQCTRHYMHGELNPSPG---------------LFETLVAGGLAGIVSWIPVTPFDTIKSRMQADDFRNPT--YKGMIDCSMILYRHASYHGFFKGFCMITVRSIPVNVSIIYGYELILW-LCKHFDK 294
BLAST of EWM21953.1 vs. NCBI_GenBank
Match: gi|645017558|ref|XP_008206662.1| (PREDICTED: solute carrier family 25 member 45 isoform X1 [Nasonia vitripennis]) HSP 1 Score: 147.902 bits (372), Expect = 6.078e-38 Identity = 99/341 (29.03%), Postives = 161/341 (47.21%), Query Frame = 0
Query: 63 EGFLGFASGLVAGIIGVLTGYPLDTLKVKMQV----YGSGSRVALLDENTGRNPVRIVRQLFRGVLPPLLSTGLVQTLNFGVYDNTLRYLRVGREEQKRQAGRQSRGLEEREEGSASYHGPNVLPDFFLAGAVGGAAISIITCPASLIKIQVQT---------------ASSSSVTYWTVLAGMRRKGLVAGYYRAFVPDVLNQMVGRGVYMCTYEALKRLLHPSPPPTPGTVHEPPSRLHHQAQPLYQRILAGALAGVCGWLCIYPLDVVKSRLQADALAPGANRYTTMTDCFRQSYRAGGLRSLYSGLGYTLLRAVPVASVILPCYDATYHVLARHLDE 384
E F F +G AGI GVL G+P+DT+K Q+ + V L+ + G+ L++G+L PL+ +G + ++ FGVYD LR+L Q+ R + + G L D F+AG +GG A ++ITCP+ LIKI++Q + +++ + VL + R+ + G++ FVP V +G G Y+ +Y+ + +H P+PG L++ ++AG LAG+ W+ + P D +KSR+QAD Y M DC YR + G +R++PV I+ Y+ L +H D+
Sbjct: 2 ENFRHFIAGWGAGIFGVLIGHPMDTIKTHQQMCNHKLSTKDAVKLIIKRDGK------LGLYKGMLFPLVCSGCLNSIYFGVYDIFLRHL---------QSLRGNSKVLPTNTGW--------LQDLFIAGIIGGTAQALITCPSELIKIKMQVGKGIADNDKGLCKSKVTRRNLSTFRVLVDIYRQNGIRGFFVGFVPTVWRDALGGGAYILSYQCTRHYMHGELNPSPG---------------LFETLVAGGLAGIVSWIPVTPFDTIKSRMQADDFRNPT--YKGMIDCSMILYRHASYHGFFKGFCMITVRSIPVNVSIIYGYELILW-LCKHFDK 301
BLAST of EWM21953.1 vs. NCBI_GenBank
Match: gi|645017561|ref|XP_008206663.1| (PREDICTED: solute carrier family 25 member 45 isoform X3 [Nasonia vitripennis]) HSP 1 Score: 146.362 bits (368), Expect = 1.715e-37 Identity = 98/330 (29.70%), Postives = 154/330 (46.67%), Query Frame = 0
Query: 63 EGFLGFASGLVAGIIGVLTGYPLDTLKVKMQV----YGSGSRVALLDENTGRNPVRIVRQLFRGVLPPLLSTGLVQTLNFGVYDNTLRYLRVGREEQKRQAGRQSRGLEEREEGSASYHGPNVLPDFFLAGAVGGAAISIITCPASLIKIQVQT----ASSSSVTYWTVLAGMRRKGLVAGYYRAFVPDVLNQMVGRGVYMCTYEALKRLLHPSPPPTPGTVHEPPSRLHHQAQPLYQRILAGALAGVCGWLCIYPLDVVKSRLQADALAPGANRYTTMTDCFRQSYRAGGLRSLYSGLGYTLLRAVPVASVILPCYDATYHVLARHLDE 384
E F F +G AGI GVL G+P+DT+K Q+ + V L+ + G+ L++G+L PL+ +G + ++ FGVYD LR+L+ R K L D F+AG +GG A ++ITCP+ LIKI++Q A + V + R+ + G++ FVP V +G G Y+ +Y+ + +H P+PG L++ ++AG LAG+ W+ + P D +KSR+QAD Y M DC YR + G +R++PV I+ Y+ L +H D+
Sbjct: 2 ENFRHFIAGWGAGIFGVLIGHPMDTIKTHQQMCNHKLSTKDAVKLIIKRDGK------LGLYKGMLFPLVCSGCLNSIYFGVYDIFLRHLQSLRGNSKVLPTNTGW-----------------LQDLFIAGIIGGTAQALITCPSELIKIKMQVGKGIADNDKVD-------IYRQNGIRGFFVGFVPTVWRDALGGGAYILSYQCTRHYMHGELNPSPG---------------LFETLVAGGLAGIVSWIPVTPFDTIKSRMQADDFRNPT--YKGMIDCSMILYRHASYHGFFKGFCMITVRSIPVNVSIIYGYELILW-LCKHFDK 283
BLAST of EWM21953.1 vs. NCBI_GenBank
Match: gi|1059413507|ref|XP_017779642.1| (PREDICTED: solute carrier family 25 member 45 isoform X1 [Nicrophorus vespilloides]) HSP 1 Score: 145.976 bits (367), Expect = 2.359e-37 Identity = 95/316 (30.06%), Postives = 145/316 (45.89%), Query Frame = 0
Query: 68 FASGLVAGIIGVLTGYPLDTLKVKMQVYGSGSRVALLDENTGRNPVRIVRQLFRGVLPPLLSTGLVQTLNFGVYDNTLRYLRVGREEQKRQAGRQSRGLEEREEGSASYHGPNVLPDFFLAGAVGGAAISIITCPASLIKIQVQTASSSSVTY-----------WTVLAGMRRKGLVAGYYRAFVPDVLNQMVGRGVYMCTYEALKRLLHPSPPPTPGTVHEPPSRLHHQAQPLYQRILAGALAGVCGWLCIYPLDVVKSRLQADALAPGANRYTTMTDCFRQSYRAGGLRSLYSGLGYTLLRAVPVASVILPCYD 372
F++G + G+ G++ G+PLDT+KV+ Q GS A+ P R F+GVL P L TG + FG+Y N +R + QS+G ++E P + F G G ++TCP L+KI +Q + + W + + +K + G Y+ P + + G+Y +YE LK V+ P +L+H PL ++++AG AGV W + P+DV+KSRLQ D +P +Y DCF QSYRA G + G+G RA P + I Y+
Sbjct: 6 FSAGWIGGVAGLVVGHPLDTMKVRQQTLGSSLWKAVQMTFVHEGP----RAFFKGVLFPALMTGPSNAVFFGIYGNYMRIV-------------QSQG--DKEFFRVQKDDPEWMKHVFWGGCTAGFFQVVVTCPPELVKIILQCQTEHKGVWHIPHETHYHGVWDCVRKLFKKRGIPGLYKGVFPMMCRDVPTSGIYTLSYELLK------------IVNYPIEKLNH---PLVKQVMAGGCAGVLSWSIVIPIDVIKSRLQVD--SPDLPKYKGFYDCFYQSYRAEGWGAFTKGMGAVCARAFPANAAIFVTYE 285
BLAST of EWM21953.1 vs. NCBI_GenBank
Match: gi|1183437830|gb|ORY62020.1| (mitochondrial carrier [Neocallimastix californiae]) HSP 1 Score: 145.976 bits (367), Expect = 3.651e-37 Identity = 96/319 (30.09%), Postives = 145/319 (45.45%), Query Frame = 0
Query: 70 SGLVAGIIGVLTGYPLDTLKVKMQVYGSGSR---VALLDENTGRNPVRIVRQLFRGVLPPLLSTGLVQTLNFGVYDNTLRYLRVGREEQKRQAGRQSRGLEEREEGSASYHGPNVLPDFFLAGAVGGAAISIITCPASLIKIQ-------VQTASSSSVTYWTVLAGMRRKGLVAGYYRAFVPDVLNQMVGRGVYMCTYEALKRLLHPSPPPTPGTVHEPPSRLHHQAQPLYQRILAGALAGVCGWLCIYPLDVVKSRLQADALAPGANRYTTMTDCFRQSYRAGGLRSLYSGLGYTLLRAVPVASVILPCYDATYHVL 378
S A ++G L GYP D++K +MQ Y G + L + G VR FRGV PPL++ +V++++F +Y+ +S+ +R S S +G V AGAV G +II+CP LIK+Q V+ S+ + T + + G + G YR F+ +G G Y C YE K+LL + H AG AG+ W+CI+P+D+VKS+LQ D + Y + C +Q Y+ G+R Y G+ L+RA PV ++ Y+ HVL
Sbjct: 26 SATSASVVGTLVGYPFDSIKTRMQTYNYGKMTNCIKLTYRSEG------VRGFFRGVCPPLVTVSIVKSISFSIYN-------------------RSKDFIDRFYDSKSLYGLTVSSS--AAGAVSGYVSAIISCPLELIKMQRQIEQLLVRQRQYSTTSLQTGINIFKANG-IRGLYRGFLFQGFRDAIGTGSYFCAYEITKKLLTLGDRESTHVTH----------------FFAGGFAGIASWICIFPIDLVKSKLQIDVKSKN-KIYKSQLQCIKQIYKTSGVRGFYHGISSCLIRAFPVHALNFVVYE---HVL 296
BLAST of EWM21953.1 vs. NCBI_GenBank
Match: gi|443894215|dbj|GAC71564.1| (mitochondrial carnitine-acylcarnitine carrier protein [Moesziomyces antarcticus T-34]) HSP 1 Score: 140.969 bits (354), Expect = 2.330e-35 Identity = 105/302 (34.77%), Postives = 142/302 (47.02%), Query Frame = 0
Query: 70 SGLVAGIIGVLTGYPLDTLKVKMQVYGSGSRVALLDENTGRNPVRIVRQ-----LFRGVLPPLLSTGLVQTLNFGVYDNTLRYLRVGREEQKRQAGRQSRGLEEREEGSASYHGPNVLPDFFLAGAVGGAAISIITCPASLIKIQVQTASSSSVTYWTVLAGMR----RKGLVAGYYRAFVPDVLNQMVGRGVYMCTYEAL--KRLLHPSPPPTPGTVHEPPSRLHHQAQPLYQRILAGALAGVCGWLCIYPLDVVKSRLQADALAPGANRYTTMTDCFRQSYRAGGLRSLYSGLGYTLLRA 360
SG V GI VL G PLD LKV++Q G+ +LD T RIVR ++G L PLL G ++ FGV + R+ S L SY F+LAG V G A S + P I+I++QT S + Y L +R R GL+ G +R +P + G G+Y TYEAL ++L + R+ P + AGA+AG WL YP D++KS+LQ DAL P RYT DC RQ++RA GL+ + GL TL+R+
Sbjct: 22 SGTVGGIAQVLVGQPLDILKVRLQTSPPGTYTGMLDCAT-----RIVRNEGPLAFYKGTLTPLLGVGACVSIQFGVVEALKRHF-------------SSSNLAAGRAADLSYS------QFYLAGGVAGLANSFVAGPVEHIRIRLQTQPSPPL-YRGPLDCIRQITARSGLLHGVFRGQMPTFAREFHGMGMYFLTYEALVQRKLAN--------------DRITRDQLPGTYAMFAGAMAGYGLWLTAYPADIIKSKLQTDALDPAKRRYTGTLDCIRQTFRADGLKGFFRGLLPTLVRS 284 The following BLAST results are available for this feature:
BLAST of EWM21953.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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