EWM30552.1, cds87 (CDS) Nannochloropsis gaditana

Overview
NameEWM30552.1
Unique Namecds87
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:239924..240040 -
Alignment locationCM002455.1:239488..239718 -
Alignment locationCM002455.1:237442..239307 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM30552.1
Productglycerol-3-phosphate transporter
Orig transcript idgnl|cribi|Naga_100033g12.8391.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:239924..240040 -
CM002455.1supercontigCM002455.1:239488..239718 -
CM002455.1supercontigCM002455.1:237442..239307 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: INTERPRO
TermDefinition
IPR020846MFS_dom
IPR011701MFS
Homology
BLAST of EWM30552.1 vs. NCBI_GenBank
Match: gi|585113219|gb|EWM30552.1| (glycerol-3-phosphate transporter [Nannochloropsis gaditana])

HSP 1 Score: 1503.42 bits (3891), Expect = 0.000e+0
Identity = 737/737 (100.00%), Postives = 737/737 (100.00%), Query Frame = 0
Query:    1 MVRLEKERIPVHPLVITRIQSSEADPTFDKIFLDKLCMHPAHLSVWYSFSYQKLSPWNFLPIRADKFRMTVNKHRPGRASLSTAFAKISKMKLEADYHGCCVDENITSMEALKITFAMPFYVRKHVPPGSIAASGGFFEGSLSHQQIRLLLGLYAGYCSMMFSRAAMDVAIPLILQDEATGIDPRDIGTLLTLCSFFYLFGKISMGYSVDQVGPRLVFLGLASFASAGLTCLISFSHTAARMTFLMCALCVAQSSGWAAITSMISLWLQPSQYAMAFGILSTSSRMGDLASKVALGRAVASGWDWRSLFILAAALQLFVAFLNLFLLPKATSIASFASAAPSMSFLSTTSSLIAEDKKQTLCASPQQRRPSTLGFHGAGYIPDREEQLVLLDTSASSPPRSLSTYVSASLSQIWAIARTPRFRSMALAIAALHIVMEFDKYIPLYLHRSLGLSPGLAAQGAALYPLSQLLALGLAGVAYDRLKPRGRLLTVGALCLGVAGFFALQVLLLLTPSALLPRQNIFLLLIFCAGFCVAVPYYLPPSIYLAEVGGKGKCGTLSGVLDASGGVTSMGFHYGVGYLVARDRWGLLLGVVSVCALVGFRAMTTFHEVSLALDGSRAPRQKKNDLLPETLPTLPTARTTTSYMSRTNKIGGNESKANVGASHLYNHQPPLQYPLKGPIQASVLSRLPLIGHLIPRARGMSWMSMKEGKPAVGAMMNRKKERKDSNDGNYQKHLAAV 737
            MVRLEKERIPVHPLVITRIQSSEADPTFDKIFLDKLCMHPAHLSVWYSFSYQKLSPWNFLPIRADKFRMTVNKHRPGRASLSTAFAKISKMKLEADYHGCCVDENITSMEALKITFAMPFYVRKHVPPGSIAASGGFFEGSLSHQQIRLLLGLYAGYCSMMFSRAAMDVAIPLILQDEATGIDPRDIGTLLTLCSFFYLFGKISMGYSVDQVGPRLVFLGLASFASAGLTCLISFSHTAARMTFLMCALCVAQSSGWAAITSMISLWLQPSQYAMAFGILSTSSRMGDLASKVALGRAVASGWDWRSLFILAAALQLFVAFLNLFLLPKATSIASFASAAPSMSFLSTTSSLIAEDKKQTLCASPQQRRPSTLGFHGAGYIPDREEQLVLLDTSASSPPRSLSTYVSASLSQIWAIARTPRFRSMALAIAALHIVMEFDKYIPLYLHRSLGLSPGLAAQGAALYPLSQLLALGLAGVAYDRLKPRGRLLTVGALCLGVAGFFALQVLLLLTPSALLPRQNIFLLLIFCAGFCVAVPYYLPPSIYLAEVGGKGKCGTLSGVLDASGGVTSMGFHYGVGYLVARDRWGLLLGVVSVCALVGFRAMTTFHEVSLALDGSRAPRQKKNDLLPETLPTLPTARTTTSYMSRTNKIGGNESKANVGASHLYNHQPPLQYPLKGPIQASVLSRLPLIGHLIPRARGMSWMSMKEGKPAVGAMMNRKKERKDSNDGNYQKHLAAV
Sbjct:    1 MVRLEKERIPVHPLVITRIQSSEADPTFDKIFLDKLCMHPAHLSVWYSFSYQKLSPWNFLPIRADKFRMTVNKHRPGRASLSTAFAKISKMKLEADYHGCCVDENITSMEALKITFAMPFYVRKHVPPGSIAASGGFFEGSLSHQQIRLLLGLYAGYCSMMFSRAAMDVAIPLILQDEATGIDPRDIGTLLTLCSFFYLFGKISMGYSVDQVGPRLVFLGLASFASAGLTCLISFSHTAARMTFLMCALCVAQSSGWAAITSMISLWLQPSQYAMAFGILSTSSRMGDLASKVALGRAVASGWDWRSLFILAAALQLFVAFLNLFLLPKATSIASFASAAPSMSFLSTTSSLIAEDKKQTLCASPQQRRPSTLGFHGAGYIPDREEQLVLLDTSASSPPRSLSTYVSASLSQIWAIARTPRFRSMALAIAALHIVMEFDKYIPLYLHRSLGLSPGLAAQGAALYPLSQLLALGLAGVAYDRLKPRGRLLTVGALCLGVAGFFALQVLLLLTPSALLPRQNIFLLLIFCAGFCVAVPYYLPPSIYLAEVGGKGKCGTLSGVLDASGGVTSMGFHYGVGYLVARDRWGLLLGVVSVCALVGFRAMTTFHEVSLALDGSRAPRQKKNDLLPETLPTLPTARTTTSYMSRTNKIGGNESKANVGASHLYNHQPPLQYPLKGPIQASVLSRLPLIGHLIPRARGMSWMSMKEGKPAVGAMMNRKKERKDSNDGNYQKHLAAV 737          
BLAST of EWM30552.1 vs. NCBI_GenBank
Match: gi|1056839643|ref|WP_068258670.1| (MFS transporter [Rubripirellula obstinata])

HSP 1 Score: 148.288 bits (373), Expect = 1.639e-34
Identity = 145/488 (29.71%), Postives = 227/488 (46.52%), Query Frame = 0
Query:  144 HQQIRLLLGLYAGYCSMMFSRAAMDVAIPLILQDEATGIDPRDIGTLLTLCSFFYLFGKISMGYSVDQVGPRLVFL---GLASFASAGLTCLISFSHTAARMTFLMCALCVAQSSGWAAITSMISLWLQPSQYAMAFGILSTSSRMGDLASKVALGRAVASGWDWRSLFILAAALQLFVAFLNLFLLPKATSIASFASAAPSMSFLSTTSSLIAEDKK-----QTLCASPQQR--RPSTLGFHGAGYIPDREEQLVLLDTSASSPPRSLSTYVSASLSQ-IWAIARTPRFRSMALAIAALHIVMEFDKYIPLYLHRSLGLSPGLAAQGAALYPLSQLLALGLAGVAYDRLKPRGRLLTVGA-LCLGVAGFFALQVLLLLTPSALLPRQNIFLLLIFCAGFCVAVPYYLPPSIYLAEVGGKGKCGTLSGVLDASGGVTSMGFHYGVGYLVARDRWGLLL-GVVSVCALVGFRAMTTFHEVSLALDGSRA 618
              Q+ +L  +YAGY + M  R  +  +   ++ D +  +D    G L++  S   + GK+  G   D +G R +FL    L + A+ G     SF+   A M FL      A+S GW A+T M+  W    +Y   + ++STSSR+G + + + LG A+ S   WRS+F+L+AA+ L V  +  F L +  S       A     L+  +S +AE K      ++  A P+ R   P +LG                 D +AS     L    SA+  + + A AR+ RF S+   I  L I+M+F  +IP+YL  SLG+S   A+   + +P     AL L    YD L  R  +  +G  L LG     AL  L  ++ S    R  + + ++F  G  ++  YY+P S++    GGK   G L  ++D  G   +M F++  G +     W + L G++++  L     MTTF    LALD   A
Sbjct:   20 EWQLTILASMYAGYAAFMLCRNTLISSSAAMMLDPSLDLDKESFGHLMSWHSAGAIAGKLVTGPGADWLGGRRMFLLALSLTAMANVGFAFGGSFA-VFALMNFLGQ---FAKSGGWPAMTKMVGSWYPEHRYGQVWSLISTSSRVGTIGAGLVLGFAL-SLVSWRSIFLLSAAITLVVVAVLFFFLKEEPSDVGLPPLAEPTPPLAEPTSRLAEPKSRLAEPKSRLAEPKSRLAEPKSLG----------------DDANASRADHVLD---SANWHEALTAFARSGRFWSIGFGIVFLTIMMDFLVFIPIYLSESLGISGSAASMAGSSFPAGMFAALLLTSFVYDNLSKRTLVWALGGMLTLGCGCVIALSNLAFVSESI---RSPVAIAVLFLLGLSISPAYYVPMSVFSVRFGGK-HSGMLVSLIDVFGYCGAMLFNFFGGSIAEHYGWSVFLTGLLAISCLATLL-MTTF----LALDARSA 474          
BLAST of EWM30552.1 vs. NCBI_GenBank
Match: gi|873219951|emb|CEM36578.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 137.117 bits (344), Expect = 3.228e-30
Identity = 132/505 (26.14%), Postives = 212/505 (41.98%), Query Frame = 0
Query:  153 LYAGYCSMMFSRAAMDVAIPLILQDEATGIDPRDIGTLLTLCSFFYLFGKISMGYSVDQVGPRLVFLGLASFASAGLTCLISFSHTAARMTFLMCALCVAQSSGWAAITSMISLWLQPSQYAMAFGILSTSSRMGDLASKVALGRAVASGWDWRSLFI-LAAALQLFVAFLNLFLLPKATSIASFASAAPSMSFLSTTSSLIAEDKKQTLCA------------------SPQQRRPSTLGFHGAGY--IPDREEQLVLLDTSASSPPRSLSTYVSAS--LSQIWAIARTPRFRSMALAIAALHIVMEFDKYIPLYLHRSLGLSPGLAAQGAALYPLSQLLALGLAGVAYDRLKPRGRLLTVGAL-----CLGVAGFFALQVLLL-------LTPSALLPRQNIFLLLIFCA---------------------GFCVAVPYYLPPSIYLAEVGGKGKCGTLSGVLDASGGVTSMGFHYGVGYLVARDRW----GLLLGVVSVCAL 597
            LYA Y  +M++R  +DV+   +  D  T  D    G +    ++ YL GK+     VD  G + + +   +  SA  T L   + +      L        + GW A+  ++  W  P+QY   FG+LST+SR G + + +  GR +  G  WRSLFI  AA L   +A  N FL  K T        A     L        + ++ T+ A                  S  QR+ +  G    G+    D               PR    +      L+ +   ++   F  ++++I  +  + E + + P YL   L LSPG AA  A+++P   ++++ L G  YDRL  RGR + + +L     C+ +A  F    +LL        +P A + R    ++++  A                     GFC    Y++P S+Y A  GGK  C TL+G+LDA G +++  F   VG++   +RW     LL   ++ C L
Sbjct:   76 LYAAYMGLMYARGVLDVSNAAMKNDSQTTWDFETAGDVFACGNYAYLVGKLVSPLMVDLAGAQSLLVYTLALGSA-TTFLFGLNGSPWTAALLWGLFRFGLAFGWPALGRIVCAWCLPTQYGQVFGVLSTASRTGAVMASLVAGRLLMWGVPWRSLFIGAAALLLALLALTNAFLRDKPTDWGLEEVHAKGQELLPLMVVEEDDTEESTMEAGGAVDNSTSTAATATAERSMHQRKGTARGEVDGGFWLWNDGGGGGAGGGDGVKGGPRRAVRHGEDESLLTALGKFSQEGHFWLISVSIMLITPLTEMNSWWPSYLSHVLKLSPGEAASIASVFPAGFIISVLLGGWLYDRLSSRGRFVFISSLLLTGTCVALALRFVHPTVLLEQLELAVESPDASVSRDGDGMVIVDPAHPHYAKLVALRLPLLVLVFLLGFCFGPAYFIPTSVYCASFGGKRHCSTLAGLLDAFGYLSTTAFMVAVGHIAKANRWVQVLDLLWTSLACCTL 579          
BLAST of EWM30552.1 vs. NCBI_GenBank
Match: gi|1199213454|gb|OUR80994.1| (MFS transporter [Colwellia psychrerythraea])

HSP 1 Score: 124.79 bits (312), Expect = 8.778e-27
Identity = 125/466 (26.82%), Postives = 197/466 (42.27%), Query Frame = 0
Query:  145 QQIRLLLGLYAGYCSMMFSRAAMDVAIPLILQDEATGIDPRDIGTLLTLCSFFYLFGKISMGYSVDQVGPRLVFLGLASFASAGLTCLISFSHTAARMTFLMCALCVAQSSGWAAITSMISLWLQPSQYAMAFGILSTSSRMGDLASKVALGRAVASGWDWRSLFILAAALQLFVAFLNLFLLPKATSIASFASAAPSMSFLSTTSSLIAEDKKQTLCASPQQRRPSTLGFHGAGYIPDREEQLVLLDTSASSPPRSLSTYVSASLSQIWAIARTPRFRSMALAIAALHIVMEFDKYIPLYLHRSLGLSPGLAAQGAALYPLSQLLALGLAGVA-YDRLKPRG-RLLTVGALCLGVAGFFALQVLLLLTPSALLPRQNIFLLLIFCAGFCVAVPYYLPPSIYLAEVGGKGKCGTLSGVLDASGGVTSMGFHYGVGYLV-ARDRWGLLL---------GVVSVCALV 598
            QQI +++ +Y GY +MM  R  + +  P +L DE  G+   ++G      +   L GK+  G   D++G R  FL +  F +A        S      T     L   +SSGW  +T ++  W  P  Y   + IL+TSSR+  + + +  G  + S   WR +  +AA   L +     F L +  S  +F                  ED+  T   +P+Q   +                   LD   + P + + T     +  +   A++PR   + + +  L  +M F  ++ +YL  S  L+P  AA  + ++P+  L  L LA +A YDR   +G R +   AL L +     LQ L L    A L    + L+ IF   F ++  YYLP SI+  E GG     TL  ++DA G   S  F +  G L  + D W   +         GV+SV A +
Sbjct:    7 QQINIIVSMYLGYGAMMICRQMVTILSPALLADETLGLTKTNLGDFAAYGTLGALVGKLIWGPLADKIGGRFTFL-IGIFLTALFIIAFGLSPNVMAFTGFSFLLYCTKSSGWPGMTKLVGEWYHPQHYGRVWSILATSSRLSVVLATLFFGW-LMSFMHWRMVAFIAAIFALIIFVGCYFYLKEKPSPPNF----------------FKEDETNT--DNPEQATATKQA----------------LDNKYNHPLKGIGT-----IGGLVTFAKSPRVWLVVIMLMMLTCMMAFLDFVAVYLMESYQLTPSQAAMASTVFPVGSLTGL-LASIAFYDRFSKKGIRAVLTIALILSLLSVLTLQYLPLFNLIAEL-NYTVALVAIFLFAFSISPAYYLPMSIFSIEYGGP-HSATLVCLIDAFGFAASATFAFIGGRLADSADGWSNFMNMLIFISAAGVISVWAFM 428          
BLAST of EWM30552.1 vs. NCBI_GenBank
Match: gi|951459372|ref|WP_057831390.1| (MFS transporter [Colwellia sp. TT2012])

HSP 1 Score: 124.79 bits (312), Expect = 9.090e-27
Identity = 126/484 (26.03%), Postives = 209/484 (43.18%), Query Frame = 0
Query:  145 QQIRLLLGLYAGYCSMMFSRAAMDVAIPLILQDEATGIDPRDIGTLLTLCSFFYLFGKISMGYSVDQVGPRL-VFLGLASFASAGLTCL--ISFSHTAARMTFLMCA--LCVAQSSGWAAITSMISLWLQPSQYAMAFGILSTSSRMGDLASKVALGRAVASGWDWRSLFILAAALQLFVAFLNLFLLPKATSIASFASAAPSMSFLSTTSSLIAEDKKQTLCASPQQRRPSTLGFHGAGYIPDREEQLVLLDTSASSPPRSLSTYVSASLSQIWAIARTPRFRSMALAIAALHIVMEFDKYIPLYLHRSLGLSPGLAAQGAALYPLSQLLALGLAGVAYDRLKPRG-RLLTVGALCLGVAGFFALQVLLLLTPSALLPRQNIFLLLIFCAGFCVAVPYYLPPSIYLAEVGGKGKCGTLSGVLDASGGVTSMGFHYGVGYLV-ARDRWGLLLGVVSVCALVGFRAMTTFHEVSLALDGSRAPRQ 621
            Q+I +++ +Y GY +MM  R  + +  P +L DE   +   ++G      +   L GK+  G   D++G R+ + +G+       LT L  I+F  +A  M F  C+  L   +SSGW  +T +I  W  P  Y   + IL+TSSR   + +    G  + S   WR++  +AA L L + F+  ++  K                         E++  T     ++   S         +  R E+   LD   + P +   T     ++ + A A++PR   + + +  L  +M F  ++ +YL  S  L+P  AA  + ++P+  L  L  A   YDR   RG R +   AL L +     LQ L     SA +   ++ L  IF   F ++  YYLP SI+  E GG     TL  ++DA G   S  F +  G L  +   W   + ++ + + VG  ++  F          RA +Q
Sbjct:    7 QKINIIVAMYLGYAAMMICRQMVTILSPALLADETLALTKTNLGDFAAYGTLGALIGKLIWGPLADKIGGRITILMGIV------LTALFIIAFGLSANVMAFTGCSFLLYCTKSSGWPGMTKLIGQWYHPQHYGRVWSILATSSRFSVVLATFFFGW-LLSFMPWRTVAFIAATLALII-FIGCYIYLKEK---------------PDNPEFFKENENHTDNKGNKKAVNS---------VQARAEKQA-LDNKYNHPLKDTDT-----IAGLVAFAKSPRVWLVVIMLMVLTCMMAFLDFVAVYLMESYQLTPSKAAMASTVFPIGSLTGLLAAIAFYDRFSKRGIRTVLTIALILSLLSVLTLQYLPWFNLSAQM-NYSVALGAIFLFAFSISPAYYLPMSIFSIEYGGP-HSATLVCLIDAFGFAASATFAFIGGRLADSAGGWSSFMNMLILISAVGILSVWAFMHAEY-----RAAKQ 445          
BLAST of EWM30552.1 vs. NCBI_GenBank
Match: gi|196001373|ref|XP_002110554.1| (hypothetical protein TRIADDRAFT_54691 [Trichoplax adhaerens] >gi|190586505|gb|EDV26558.1| hypothetical protein TRIADDRAFT_54691 [Trichoplax adhaerens])

HSP 1 Score: 122.094 bits (305), Expect = 6.353e-26
Identity = 109/437 (24.94%), Postives = 191/437 (43.71%), Query Frame = 0
Query:  142 LSHQQIRLLLGLYAGYCSMMFSRAAMDVAIPLILQD---EATGIDPRDIGTLLTLCSFFYLFGKISMGYSVDQVGPRLVFLGLASFASAGLTCLISFSHTAARMTFLMCALCVAQSSGWAAITSMISLWLQPSQYAMAFGILSTSSRMGDLASKVALGRAVASGWDWRSL-FILAAALQLFVAFLNLFLLPKATSIASFASAAPSMSFLSTTSSLIAEDKKQTLCASPQQRRPSTLGFHGAGYIPDREEQLVLLDTSASSPPRSLSTYVSASLSQIWAIARTPRFRSMALAIAALHIVMEFDKYIPLYLHRSLGLSPGLAAQGAALYPLSQLLALGLAGVAYDRLKPRGRLLTVGALCLGVAGFFALQVLLLLTPSALLPRQNIFLLLIFCAGFCVAVPYYLPPSIYLAEVGGKGKCGTLSGVLDASGGVTSMGFHY 574
            L   Q ++  GL +G  ++  +R  ++  +P + +D    A+ ++   IGTLL   +FFY  GK   GYSVD++  R VFL L+   S+  T  I  S++   +TF  C   +  SS W ++   ++ W  P +Y    G+++ S R+G L S + +   +     WR + FI+   L                 I  FASA            L+    KQ     P +   ++ G  G  ++  + E  +  D    +  R            IW          M++ +A   I+ME   ++PL+LH  + L  G A   + ++ +  +  + L    YD+L  +   + +   C+ +    A  VL+      L     IF+L ++  GF +A+ ++LP  +++    G+  CGTL  VL+A G + ++ F Y
Sbjct:   10 LKFYQRQVWYGLISGIVTIQSARQGIESLLPAVAEDPTFVASKLNQVGIGTLLAWGNFFYFLGKCLAGYSVDKLSGRFVFL-LSLGISSAFTIFIGLSNSVTTLTFCWCINKLFISSNWPSVAKTMATWFSPERYGELNGMIAFSVRIGCLVSSLLVAELLRRHTYWRKIDFIMGLIL-----------------ILVFASALL----------LVKRSPKQLGLPDPTKMSKASQGDDGDEHVDLQNE--IEWDLITMAKDRV-----------IWL---------MSMYVAGTTILMELQSFLPLFLHLYMKLEVGFAVYASTIFQIGTICGVMLGSFLYDKLCRKNITIFLNG-CMFICT--ACLVLIWRLLPVLTSSHIIFILFVY--GFALAIIFHLPTGVFMMVHVGQRHCGTLIAVLEAFGYLFAVLFDY 391          
BLAST of EWM30552.1 vs. NCBI_GenBank
Match: gi|950124951|ref|WP_057181018.1| (MULTISPECIES: MFS transporter [Colwellia] >gi|1205367231|dbj|GAW96405.1| MFS transporter [Colwellia marinimaniae])

HSP 1 Score: 118.242 bits (295), Expect = 1.647e-24
Identity = 128/469 (27.29%), Postives = 208/469 (44.35%), Query Frame = 0
Query:  143 SHQQIRLLLGLYAGYCSMMFSRAAMDVAIPLILQDEATGIDPRDIGTLLTLCSFFYLFGKISMGYSVDQVGPRLVFLGLASFASAGLTCLISFSHTAARMTFLMCA--LCVAQSSGWAAITSMISLWLQPSQYAMAFGILSTSSRMGDLASKVALGRAVASGWDWRSLFILAAALQLFVAF-LNLFLLPKATSIASFASAAPSMSFLSTTSSLIAEDKKQTLCASPQQRRPSTLGFHGAGYIPDREEQLVLLDTSASSPPRSLSTYVSASLSQIWAIARTPRFRSMALAIAALHIVMEFDKYIPLYLHRSLGLSPGLAAQGAALYPLSQLLALGLAGVAYDRLKPRG-RLLTVGALCLGVAGFFALQVLLLLTPSALLPRQNIFLLLIFCAGFCVAVPYYLPPSIYLAEVGGKGKCGTLSGVLDASGGVTSMGFHYGVGYLV-ARDRWGLLLGVVSVCALVGFRAMTTF 606
            + QQI +++ +Y GY +MM  R  + +  P +L DE   +   ++G      +   L GK+  G   D++G R+  L +  F +A    +I+F  +A  M F  C+  L   +SSGW  +T +I  W  P  Y   + IL+TSSR   + +    G  + S   WR++  +AAAL L +     ++L  K  + A F           + S    ++K      +  Q R               E+Q   LD   + P +   T     ++ + A A++PR   + + +  L  +M F  ++ +YL  S  LSP  AA  + ++P+  L  L  A   YDR   RG R +   AL L +     LQ L     SA +   ++ L  IF   F ++  YYLP SI+  E GG     TL  ++DA G   S  F +  G L  +   W   + ++ + + VG  ++  F
Sbjct:    5 TRQQINIIVAMYLGYAAMMICRQMVTILSPALLADETLALSKTNLGDFAAYGTLGALIGKLIWGPLADKIGGRITIL-MGIFLTA--LFIIAFGLSANVMAFTGCSFLLYCTKSSGWPGMTKLIGQWYHPQHYGRVWSILATSSRFSVVLATFFFGW-LLSFMPWRTVAFIAAALALIIFIGCYVYLKEKPDNPAFFKEN-------ESHSDNKGDNKDNHKTDNSVQARA--------------EKQ--ALDNKYNHPLKDTDT-----IAGLVAFAKSPRVWLVVIMLMVLTCMMAFLDFVAVYLMESYQLSPSKAAMASTVFPIGSLTGLLAAIAFYDRCSKRGIRTVLTIALILSLLSVLTLQYLPWFNLSAQM-NFSVALGAIFLFAFSISPAYYLPMSIFSIEYGGP-HSATLVCLIDAFGFAASATFAFIGGRLADSAGGWSSFINMLILISAVGILSVWAF 439          
BLAST of EWM30552.1 vs. NCBI_GenBank
Match: gi|1101043149|gb|OIO06257.1| (MFS transporter [Elusimicrobia bacterium CG1_02_63_36])

HSP 1 Score: 117.857 bits (294), Expect = 1.788e-24
Identity = 132/451 (29.27%), Postives = 193/451 (42.79%), Query Frame = 0
Query:  145 QQIRLLLGLYAGYCSMMFSRAAMDVAIPLILQDEATGIDPRDIGTLLTLCSFFYLFGKISMGYSVDQVGPRLVFLGLASFASAGLTCLISFSHTAARMTFLMCALCVAQSSGWAAITSMISLWLQPSQYAMAFGILSTSSR----MGDLASKVALGRAVASGWDWRSLFILAAALQLFVAFLNLFLLPKATSIASFASAAPSMSFLSTTSSLIAEDKKQTLCASPQQRRPSTLGF-----HGAGYIPDREEQLVLLDTSASSPPRSLSTYVSASLSQIWAIARTPRFRSMALAIAALHIVMEFDKYIPLYLHRSLGLSPGLAAQGAALYPLSQLLALGLAGVA-YDRLKPRG--RLLTVGALCLGVAGFFALQVLLLLTPSALLPRQN----IFLLLIFCAGFCVAVPYYLPPSIYLAEVGGKGKCGTLSGVLDASGGVTSMGFHYGVGYL 579
            +Q  +L  +YAGY +MM  R  + +  P +L D + G+   ++G      +   L GK+  G   D++G R  FL L    SA L      S   A  T     L  A+S+GW  +  ++  W  P +Y   +GILSTSSR    +G L     LGR     + WR++                                   +F +T ++L+       LC      +P   GF       +G     EE    LD     P    S       + +WA A + R   +   + AL  +M F  ++P+YL    GL+P  AA  ++++P+  L  L LA VA YDR   +G  R+LT+ AL L  A   ALQVL  L    L P  N    + L+LIF  G  ++  YY+P S++  E GG     TL  ++DA G   S  F +  G L
Sbjct:    7 RQWIVLGSMYAGYGAMMVCRQMVTILSPAMLADPSLGLTKTNLGDFAAYGTIGALVGKLIWGPLGDRIGGRKTFL-LGILLSAVLVAAFGLSPGVAAFTVCSFLLYGAKSAGWPGMAKLVEEWFHPQKYGRVWGILSTSSRASVVVGTLFFGWLLGR-----YPWRAV-----------------------------------AFSATGTALLI----LALCWVTLGEKPEDPGFLEADAEASGDAEHDEESARALDNKLHHPLNGTSLP-----AALWAFANSGRCWLIVAMLMALTCMMAFLDFVPVYLMEVFGLTPSRAAMASSVFPIGSLTGL-LAAVAFYDRFSKKGLRRVLTI-ALILSTACVVALQVLPRL---GLGPDSNFAAALALILIF--GAMISPAYYIPMSVFSIEFGGP-HSATLICLIDAFGFAASASFGFVGGRL 399          
BLAST of EWM30552.1 vs. NCBI_GenBank
Match: gi|953554872|ref|WP_058027090.1| (MFS transporter [Colwellia sp. MT41] >gi|953005156|gb|ALO34869.1| MFS transporter [Colwellia sp. MT41])

HSP 1 Score: 114.39 bits (285), Expect = 2.925e-23
Identity = 127/466 (27.25%), Postives = 202/466 (43.35%), Query Frame = 0
Query:  145 QQIRLLLGLYAGYCSMMFSRAAMDVAIPLILQDEATGIDPRDIGTLLTLCSFFYLFGKISMGYSVDQVGPRLVFLGLASFASAGLTCLISFSHTAARMTFLMCA--LCVAQSSGWAAITSMISLWLQPSQYAMAFGILSTSSRMGDLASKVALGRAVASGWDWRSLFILAAALQLFVAFLNLFLLPKATSIASFASAAPSMSFLSTTSSLIAEDKKQTLCASPQQRRPSTLGFHGAGYIPDREEQLVLLDTSASSPPRSLSTYVSASLSQIWAIARTPRFRSMALAIAALHIVMEFDKYIPLYLHRSLGLSPGLAAQGAALYPLSQLLALGLAGVAYDRLKPRG-RLLTVGALCLGVAGFFALQVLLLLTPSALLPRQNIFLLLIFCAGFCVAVPYYLPPSIYLAEVGGKGKCGTLSGVLDASGGVTSMGFHYGVGYLV-ARDRWGLLLGVVSVCALVGFRAMTTF 606
             QI +++ +Y GY +MM  R  + +  P +L DE   +   ++G      +   L GK+  G   D++G RL  L +  F +A    +I+F  +   M F  C+  L   +SSGW  +T +I  W  P  Y   + IL+TSSR   + +    G  + S   WR++  +AAAL L +       L +     +F     S       S    ++K      +  Q R               E+Q   LD   + P +   T     ++ + A A++PR   + + +  L  +M F  ++ +YL  S  LSP  AA  + ++PL  L  L  A   YDR   RG R +   AL L +     LQ L     SA +   ++ L  IF   F ++  YYLP SI+  E GG     TL  ++DA G   S  F +  G L  +   W   + ++ + + VG  ++  F
Sbjct:    7 HQINIIVAMYLGYAAMMICRQMVTILSPALLADETLALSKTNLGDFAAYGTLGALVGKLIWGPLADKIGGRLTML-MGIFLTA--LFIIAFGLSTNVMAFTGCSFLLYCTKSSGWPGMTKLIGQWYHPQHYGRVWSILATSSRFSVVLATFFFGW-LLSFMPWRTVAFIAAALALIIFIGCYIYLKEKPDNPAFFKVNES------HSDNKGDNKDNHKTDNSVQARA--------------EKQ--ALDNKYNHPLKDTDT-----IAGLVAFAKSPRVWLVVIMLMVLTCMMAFLDFVAVYLMESYQLSPSKAAMASTVFPLGSLTGLLAAIAFYDRCSKRGIRTVLTIALILSLLSVLTLQYLPWFNLSAQM-NFSVALGAIFLFAFSISPAYYLPMSIFSIEYGGP-HSATLVCLIDAFGFAASAIFAFIGGRLADSAGGWSSFMNMLILISAVGILSVWAF 439          
BLAST of EWM30552.1 vs. NCBI_GenBank
Match: gi|949096969|gb|KRO85687.1| (hypothetical protein ABR72_01625 [OM182 bacterium BACL3 MAG-120920-bin41])

HSP 1 Score: 112.849 bits (281), Expect = 4.617e-23
Identity = 125/464 (26.94%), Postives = 205/464 (44.18%), Query Frame = 0
Query:  167 MDVAIPLILQDEATGIDPRDIGTLLTLCSFFYLFGKISMGYSVDQVGPRLVFLGLASFASAGLTCLISFSHTAARMTFLMCALCV-AQSSGWAAITSMISLWLQPSQYAMAFGILSTSSRMGDLASKVALGRAVASGWDWRSLFILAAALQLFVAFLNLFLLPKATSIASFASAAPSMSFLSTTSSLIAEDKKQTLCASPQQRRPSTLGFHGAGYIPDREEQLVLLDTSASSPPRSLSTYVSASLSQIWAIARTPRFRSMALAIAALHIVMEFDKYIPLYLHRSLGLSPGLAAQGAALYPLSQLLALGLAGVAYDRLKPRGRLLTVG-ALCLGVAGFFALQVLLLLTPSALLPRQNIFLLLIFCAGFCVAVPYYLPPSIYLAEVGGKGKCGTLSGVLDASGGVTSMGFHYGVGYLVARDRWG-----LLLGVVSVCALVGFRAMTTFHEVSLALDGSRAPRQKK 623
            M VA P +L D    ID    G +L   +   L GK++ G   D++G   +F+    FA+       + S  +A   F++  L V A+++GW +I ++I      +++   +G ++TSSR+  + + +     +   + WR +F  A  L L +A + +  L +                         E   Q          P++L         D E        SA  P ++L T        I    R+PRF  ++L ++AL ++ EF  ++P+YL  +  L+P  A   ++ + L  L+A+   G  YD+L  +  +  +G +L L VA    L+VL     +  L    + +LLIF  GF ++  YY+P S++    GG+  CG L G++DA     +M F + +G  VA    G     L+L V SV A +    MTTF    L LD  R  RQ  
Sbjct:    1 MGVAGPAMLADPTLNIDTATFGAILGWGTAGNLMGKVTTGALADKIGGSKIFISAIFFAAIATFIFGTLSTNSAF--FVLYFLTVFAKAAGWPSIANIIRASFSENRHGRIWGFIATSSRISSVETTLLASSLLLI-FSWRGMFFSAGILTLLIAAVLIKTLKEP------------------------EKGLQDSVQPADADNPTSL---------DDE-------VSAPHPLQTLKTR-----EAIGHFIRSPRFWLISLGVSALAVLFEFQVFLPIYLSETYDLAPAYAGIASSTFSLGCLVAVFSGGFIYDKLTKKSLIYALGLSLTLAVASLLLLRVLGDQGSTGAL-ELTLTVLLIFLFGFSISPAYYIPMSVFSISFGGR-HCGLLVGLIDAIAYFGAMSFDF-IGGAVANKEGGWQDFILILIVTSVLATI---IMTTF----LYLD-YRHSRQSN 405          
The following BLAST results are available for this feature:
BLAST of EWM30552.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585113219|gb|EWM30552.1|0.000e+0100.00glycerol-3-phosphate transporter [Nannochloropsis ... [more]
gi|1056839643|ref|WP_068258670.1|1.639e-3429.71MFS transporter [Rubripirellula obstinata][more]
gi|873219951|emb|CEM36578.1|3.228e-3026.14unnamed protein product [Vitrella brassicaformis C... [more]
gi|1199213454|gb|OUR80994.1|8.778e-2726.82MFS transporter [Colwellia psychrerythraea][more]
gi|951459372|ref|WP_057831390.1|9.090e-2726.03MFS transporter [Colwellia sp. TT2012][more]
gi|196001373|ref|XP_002110554.1|6.353e-2624.94hypothetical protein TRIADDRAFT_54691 [Trichoplax ... [more]
gi|950124951|ref|WP_057181018.1|1.647e-2427.29MULTISPECIES: MFS transporter [Colwellia] >gi|1205... [more]
gi|1101043149|gb|OIO06257.1|1.788e-2429.27MFS transporter [Elusimicrobia bacterium CG1_02_63... [more]
gi|953554872|ref|WP_058027090.1|2.925e-2327.25MFS transporter [Colwellia sp. MT41] >gi|953005156... [more]
gi|949096969|gb|KRO85687.1|4.617e-2326.94hypothetical protein ABR72_01625 [OM182 bacterium ... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna87rna87Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications