EWM21976.1, cds8699 (CDS) Nannochloropsis gaditana

Overview
NameEWM21976.1
Unique Namecds8699
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037250.1:10744..11052 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21976.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100720g3.4457.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037250.1supercontigKK037250.1:10744..11052 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM21976.1 vs. NCBI_GenBank
Match: gi|585102352|gb|EWM21976.1| (hypothetical protein Naga_100720g3 [Nannochloropsis gaditana])

HSP 1 Score: 216.083 bits (549), Expect = 3.135e-71
Identity = 102/102 (100.00%), Postives = 102/102 (100.00%), Query Frame = 0
Query:    1 MVGRRYGGGMDTQRLVRMGKGEEVFRWIKRSIATYADNLLSKGWFCMDPVASFTLPLFLHLPHLNENYDPLYLPHSHWNDDGHSHTEYRNLAPSKIRSSGPT 102
            MVGRRYGGGMDTQRLVRMGKGEEVFRWIKRSIATYADNLLSKGWFCMDPVASFTLPLFLHLPHLNENYDPLYLPHSHWNDDGHSHTEYRNLAPSKIRSSGPT
Sbjct:    1 MVGRRYGGGMDTQRLVRMGKGEEVFRWIKRSIATYADNLLSKGWFCMDPVASFTLPLFLHLPHLNENYDPLYLPHSHWNDDGHSHTEYRNLAPSKIRSSGPT 102          
The following BLAST results are available for this feature:
BLAST of EWM21976.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585102352|gb|EWM21976.1|3.135e-71100.00hypothetical protein Naga_100720g3 [Nannochloropsi... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8728rna8728Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications