EWM21991.1, cds8679 (CDS) Nannochloropsis gaditana

Overview
NameEWM21991.1
Unique Namecds8679
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:637455..637677 -
Alignment locationKK037249.1:636758..637182 -
Alignment locationKK037249.1:636300..636404 -
Alignment locationKK037249.1:636017..636122 -
Alignment locationKK037249.1:635664..635806 -
Alignment locationKK037249.1:635048..635383 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM21991.1
Productabc transporter b family member 28
Orig transcript idgnl|cribi|Naga_100670g3.7114.mrna
GbkeyCDS
Noteencoded by transcript variant 1; alternatively spliced
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:637455..637677 -
KK037249.1supercontigKK037249.1:636758..637182 -
KK037249.1supercontigKK037249.1:636300..636404 -
KK037249.1supercontigKK037249.1:636017..636122 -
KK037249.1supercontigKK037249.1:635664..635806 -
KK037249.1supercontigKK037249.1:635048..635383 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0055085transmembrane transport
GO:0006810transport
Vocabulary: Molecular Function
TermDefinition
GO:0005215transporter activity
GO:0000166nucleotide binding
GO:0042626ATPase activity, coupled to transmembrane movement of substances
GO:0005524ATP binding
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: INTERPRO
TermDefinition
IPR011527ABC1_TM_dom
Homology
BLAST of EWM21991.1 vs. NCBI_GenBank
Match: gi|585102380|gb|EWM21991.1| (abc transporter b family member 28 [Nannochloropsis gaditana])

HSP 1 Score: 887.1 bits (2291), Expect = 0.000e+0
Identity = 445/445 (100.00%), Postives = 445/445 (100.00%), Query Frame = 0
Query:    1 MSLLSSRSLRWPVSSRALVFCLVLIFWADTIAYVLPLLRTLGTSTRSPPQKARLNMATPIHRPQKIALRSCFGSGYPPRSPRIPTLPTSAPRASIRRFSSMLASSFIPAFLRRRGGTTANPPPAIRPSTSPPPSSPPSLDASRQPTTPHDLQWAAFAGPSDSPTRLRKRDLAIGGVLSVLATVAAVSVPLGYGGVVNVLLLPAETPLLERKMAFTKALRLLACIYSAEPFLTWVYIRHMTGLFSKGVLNLKNAVFTRLLEQDVAFFDRAGPGEITSYLSQDISGLKDILYGNLQRDRGLRALLEAVVGTILLFKLQPRLGLVFSLVIPTVATITAQLGRRLTRTILLEGRALAAENGCAIEVVRNIREVKSFAAEGKETARYFSRLWRTQTLSAQAGRNRGLMESCSRFAIYFSIFTVSMLGGSLVQRGEMGAASLVAFIGYCFR 445
            MSLLSSRSLRWPVSSRALVFCLVLIFWADTIAYVLPLLRTLGTSTRSPPQKARLNMATPIHRPQKIALRSCFGSGYPPRSPRIPTLPTSAPRASIRRFSSMLASSFIPAFLRRRGGTTANPPPAIRPSTSPPPSSPPSLDASRQPTTPHDLQWAAFAGPSDSPTRLRKRDLAIGGVLSVLATVAAVSVPLGYGGVVNVLLLPAETPLLERKMAFTKALRLLACIYSAEPFLTWVYIRHMTGLFSKGVLNLKNAVFTRLLEQDVAFFDRAGPGEITSYLSQDISGLKDILYGNLQRDRGLRALLEAVVGTILLFKLQPRLGLVFSLVIPTVATITAQLGRRLTRTILLEGRALAAENGCAIEVVRNIREVKSFAAEGKETARYFSRLWRTQTLSAQAGRNRGLMESCSRFAIYFSIFTVSMLGGSLVQRGEMGAASLVAFIGYCFR
Sbjct:    1 MSLLSSRSLRWPVSSRALVFCLVLIFWADTIAYVLPLLRTLGTSTRSPPQKARLNMATPIHRPQKIALRSCFGSGYPPRSPRIPTLPTSAPRASIRRFSSMLASSFIPAFLRRRGGTTANPPPAIRPSTSPPPSSPPSLDASRQPTTPHDLQWAAFAGPSDSPTRLRKRDLAIGGVLSVLATVAAVSVPLGYGGVVNVLLLPAETPLLERKMAFTKALRLLACIYSAEPFLTWVYIRHMTGLFSKGVLNLKNAVFTRLLEQDVAFFDRAGPGEITSYLSQDISGLKDILYGNLQRDRGLRALLEAVVGTILLFKLQPRLGLVFSLVIPTVATITAQLGRRLTRTILLEGRALAAENGCAIEVVRNIREVKSFAAEGKETARYFSRLWRTQTLSAQAGRNRGLMESCSRFAIYFSIFTVSMLGGSLVQRGEMGAASLVAFIGYCFR 445          
BLAST of EWM21991.1 vs. NCBI_GenBank
Match: gi|585102381|gb|EWM21992.1| (abc transporter b family member 28 [Nannochloropsis gaditana])

HSP 1 Score: 664.07 bits (1712), Expect = 0.000e+0
Identity = 334/337 (99.11%), Postives = 335/337 (99.41%), Query Frame = 0
Query:    1 MSLLSSRSLRWPVSSRALVFCLVLIFWADTIAYVLPLLRTLGTSTRSPPQKARLNMATPIHRPQKIALRSCFGSGYPPRSPRIPTLPTSAPRASIRRFSSMLASSFIPAFLRRRGGTTANPPPAIRPSTSPPPSSPPSLDASRQPTTPHDLQWAAFAGPSDSPTRLRKRDLAIGGVLSVLATVAAVSVPLGYGGVVNVLLLPAETPLLERKMAFTKALRLLACIYSAEPFLTWVYIRHMTGLFSKGVLNLKNAVFTRLLEQDVAFFDRAGPGEITSYLSQDISGLKDILYGNLQRDRGLRALLEAVVGTILLFKLQPRLGLVFSLVIPTVATITAQL 337
            MSLLSSRSLRWPVSSRALVFCLVLIFWADTIAYVLPLLRTLGTSTRSPPQKARLNMATPIHRPQKIALRSCFGSGYPPRSPRIPTLPTSAPRASIRRFSSMLASSFIPAFLRRRGGTTANPPPAIRPSTSPPPSSPPSLDASRQPTTPHDLQWAAFAGPSDSPTRLRKRDLAIGGVLSVLATVAAVSVPLGYGGVVNVLLLPAETPLLERKMAFTKALRLLACIYSAEPFLTWVYIRHMTGLFSKGVLNLKNAVFTRLLEQDVAFFDRAGPGEITSYLSQDISGLKDILYGNLQRDRGLRALLEAVVGTILLFKLQPRLGLVFSLVIPTVATIT  +
Sbjct:    1 MSLLSSRSLRWPVSSRALVFCLVLIFWADTIAYVLPLLRTLGTSTRSPPQKARLNMATPIHRPQKIALRSCFGSGYPPRSPRIPTLPTSAPRASIRRFSSMLASSFIPAFLRRRGGTTANPPPAIRPSTSPPPSSPPSLDASRQPTTPHDLQWAAFAGPSDSPTRLRKRDLAIGGVLSVLATVAAVSVPLGYGGVVNVLLLPAETPLLERKMAFTKALRLLACIYSAEPFLTWVYIRHMTGLFSKGVLNLKNAVFTRLLEQDVAFFDRAGPGEITSYLSQDISGLKDILYGNLQRDRGLRALLEAVVGTILLFKLQPRLGLVFSLVIPTVATITVSI 337          
BLAST of EWM21991.1 vs. NCBI_GenBank
Match: gi|873218424|emb|CEM39524.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 179.874 bits (455), Expect = 6.558e-46
Identity = 100/276 (36.23%), Postives = 159/276 (57.61%), Query Frame = 0
Query:  169 RDLAIGGVLSVLATVAAVSVPLGYGGVVNVLLLPAETPLLERKMAFTKALRLLACIYSAEPFLTWVYIRHMTGLFSKGVLNLKNAVFTRLLEQDVAFFDRAGPGEITSYLSQDISGLKDILYGNLQRDRGLRALLEAVVGTILLFKLQPRLGLVFSLVIPTVATITAQLGRRLTRTILLEGRALAAENGCAIEVVRNIREVKSFAAEGKETARYFSRLWRTQTLSAQAGRNRGLMESCSRFAIYFSIFTVSMLGGSLVQRGEMGAASLVAFIGYCF 444
            R + +G + + + +V   S+PL +  V+NVLL PA  PL E    FTKA  +L  +Y  EP  T +Y+R  T +    +  LK   F  ++ +++ FFDR GP  + + L+     ++D L  N+ R RG+RALL+ V+   +L    P+L  +F LVIP +A    ++     RTI  E  AL AE     E++RNIREV+SF  E KE  RY   + R+   + + G  RG +E+ +R AIY ++ +++++GG++V+RG +   +LV+FIG+ F
Sbjct:   95 RRIVLGFLFAFVGSVVTCSLPLAFTNVLNVLLTPA--PLQE----FTKACAILGSLYVLEPICTLLYVRQATRVVQAYLNVLKATAFQSVVSRNIEFFDREGPSNVANLLTTSFGRVRDCLLANIDRQRGVRALLDCVIALSILISTAPQLAWLFGLVIPIMAFTVNRVSATYQRTIREESTALTAEASAGGEILRNIREVRSFGTEQKENDRYGRFVARSGAFARRVGMARGRVEAVTRAAIYSTLLSLAIVGGTMVRRGTLVPTTLVSFIGFSF 364          
BLAST of EWM21991.1 vs. NCBI_GenBank
Match: gi|1104661644|ref|XP_019081606.1| (PREDICTED: ABC transporter B family member 28 [Vitis vinifera] >gi|297741119|emb|CBI31850.3| unnamed protein product, partial [Vitis vinifera])

HSP 1 Score: 161.77 bits (408), Expect = 1.091e-39
Identity = 120/368 (32.61%), Postives = 185/368 (50.27%), Query Frame = 0
Query:   88 TSAPRA--SIRRFSSMLASSFIP-AFLRRRGGTTANPP------PAIRPS-TSPPPSSPPSLDASRQPTTPHDLQWAAFAGPSDSPTRLRKRDLAIGGVLSVLATVAAVSVPLGYGGVVNVLLLPAETPLLERKMAFTKALRLLACIYSAEPFLTWVYIRHMTGLFSKGVLNLKNAVFTRLLEQDVAFFDRAGPGEITSYLSQDISGLKDILYGNLQRDRGLRALLEAVVGTI-LLFKLQPRLGLVFSLVIPTVATITAQLGRRLTRTILLEGRALAAENGCAIEVVRNIREVKSFAAEGKETARYFSRLWRTQTLSAQAGRNRGLMESCSRFAIYFSIFTVSMLGGSLVQRGEMGAASLVAFIGYCF 444
            + APRA     + S   ++ F P + LR R      PP      PA  P  T P P    S DA  +   P     ++         +LR   LA+  V  +  +   +S+PL  G    VL+     PL        + L  +  +Y+ EP LT +Y+ +M  ++ K +  L+  +F RLL Q V FFDR   GE+T+ L+ D+  LKDI+  N+ RDRG RAL E V+GTI +LF L P+L  +  +++ TV+ + A   R         G A A+ + CA E    IR V+SF+ E ++ + + S++   Q+   + G  + L ES +R A+Y S+ ++  LGGS V+ GE+   ++ +FIGY F
Sbjct:   22 SHAPRALACHVKLSHSHSNPFPPFSLLRSRSKGVVRPPSAYVSGPASDPIITEPDPKVESSNDAHDETVEPPSAISSSLLWSLLMRYKLR---LAVSAVTLIGCSACTLSMPLFSGRFFEVLIGTRPEPLW-------RLLSTVGVLYTLEPVLTIIYVVNMNTIWEKVMSTLRAQIFRRLLIQKVEFFDRYKVGELTALLTSDLGSLKDIVSENISRDRGFRALSE-VIGTICILFTLAPQLAPILGILMLTVSVLVAVYKRSTVPVFKAHGLAQASISDCATETFSAIRTVRSFSGEKRQMSMFGSQVMAFQSSGIKLGTFKSLNESLTRVAVYISLMSLYCLGGSKVKAGELSVGTIASFIGYTF 378          
BLAST of EWM21991.1 vs. NCBI_GenBank
Match: gi|743828577|ref|XP_010933902.1| (PREDICTED: ABC transporter B family member 28 isoform X1 [Elaeis guineensis])

HSP 1 Score: 150.984 bits (380), Expect = 6.350e-36
Identity = 108/328 (32.93%), Postives = 165/328 (50.30%), Query Frame = 0
Query:  119 ANPPPAIRPSTSPPPSSPPSLDASRQPTTPHD-LQWAAFAGPSDSPTRLRKRDLAIGGVLSVLATVAAVSVPLGYGGVVNVLLLPAETPLLERKMAFTKALRLLACIYSAEPFLTWVYIRHMTGLFSKGVLNLKNAVFTRLLEQDVAFFDRAGPGEITSYLSQDISGLKDILYGNLQRDRGLRALLEAVVGTI-LLFKLQPRLGLVFSLVIPTVATITAQLGRRLTRTILLEGRALAAENGCAIEVVRNIREVKSFAAEGKETARYFSRLWRTQTLSAQAGRNRGLMESCSRFAIYFSIFTVSMLGGSLVQRGEMGAASLVAFIGYCF 444
            A+ P AI    SP  S+P       Q ++P   + W        S     K  +AI     V  T   +S+PL  G    +L+     PL        K L  +A +Y+ EP LT V++ +MT ++ K + +L+  +F R+L Q V FFDR   GE+T  L+ D+  LKD++  N+ RDRGLRAL E V+GTI LLF L  +L  V  L++ +V+ + A   R         G + A+ + CA E    IR V+SF  E ++ + + + +   Q    + G  +   ES +R  +Y S+ T+   GGS V+ GE+   ++ +FIGY F
Sbjct:   75 ASDPDAIDRGASPEASAP-------QVSSPAAAISWGGIW----SLLLRHKLRMAISLASLVGCTCCTLSMPLFSGKFFEILIGRGSEPLW-------KLLSKIAVLYTLEPILTIVFVINMTIMWEKVMASLRGQIFRRILIQKVEFFDRYKVGELTGLLTSDLGSLKDVVSENISRDRGLRALSE-VIGTICLLFSLSTQLAPVLGLLMVSVSVLVAIFKRSTVPIFKSHGMSQASISDCATETFSAIRTVRSFGGEKRQMSVFGNLVLAYQRSGIKLGTLKAANESLTRVVVYISLMTLYCFGGSKVKAGELSVGTMTSFIGYTF 383          
BLAST of EWM21991.1 vs. NCBI_GenBank
Match: gi|1052184927|ref|XP_008795363.2| (PREDICTED: ABC transporter B family member 28 [Phoenix dactylifera] >gi|1052184929|ref|XP_017699281.1| PREDICTED: ABC transporter B family member 28 [Phoenix dactylifera])

HSP 1 Score: 149.828 bits (377), Expect = 1.666e-35
Identity = 105/332 (31.63%), Postives = 163/332 (49.10%), Query Frame = 0
Query:  130 SPPPSSPPSLDASRQPTTPHDLQWAAFAGPSDSPTRLRKRDLAIGGVLSVL----------------ATVAAVSVPLGYGGVVNVLLLPAETPLLERKMAFTKALRLLACIYSAEPFLTWVYIRHMTGLFSKGVLNLKNAVFTRLLEQDVAFFDRAGPGEITSYLSQDISGLKDILYGNLQRDRGLRALLEAVVGTI-LLFKLQPRLGLVFSLVIPTVATITAQLGRRLTRTILLEGRALAAENGCAIEVVRNIREVKSFAAEGKETARYFSRLWRTQTLSAQAGRNRGLMESCSRFAIYFSIFTVSMLGGSLVQRGEMGAASLVAFIGYCF 444
            S P S P ++D    P  P        A P  SP       ++ GG+ S+L                 T   +S+PL  G    +L+     PL        K L  +A +Y+ EP  T +++ +MT ++ K + +L+  +F R+L Q V FFDR   GE+T  L+ D+  LKD++  N+ RDRGLRAL E V+GT+ LLF L  +L  V  L++ +VA + A   R         G + A+ + CA E    IR V+SF  E ++ + + + +   Q    + G  +   ES +R  +Y S+  +  LGGS V+ GE+   ++ +FIGY F
Sbjct:   73 SAPASDPDAIDRGASPEAP--------APPVSSPAAA----ISWGGIWSLLLRHKLRMAISLASLVGCTSCTLSMPLFSGKFFEILIGRGSEPLW-------KLLSKIAVLYTLEPIFTVIFVINMTIIWEKVMASLRGQIFRRILIQKVEFFDRHKVGELTGLLTSDLGSLKDVVSENISRDRGLRALSE-VIGTVCLLFALSTQLAPVLGLLMVSVAVLVAIFKRSTVPIFKSHGMSQASISDCATETFSAIRTVRSFGGEKRQMSLFDNLVLAYQRSGIKLGTLKSANESLTRVVVYISLMALYCLGGSKVKAGELSVGTMTSFIGYTF 384          
BLAST of EWM21991.1 vs. NCBI_GenBank
Match: gi|695014246|ref|XP_009393935.1| (PREDICTED: ABC transporter B family member 28 [Musa acuminata subsp. malaccensis] >gi|695014248|ref|XP_009393936.1| PREDICTED: ABC transporter B family member 28 [Musa acuminata subsp. malaccensis])

HSP 1 Score: 148.673 bits (374), Expect = 3.875e-35
Identity = 106/344 (30.81%), Postives = 166/344 (48.26%), Query Frame = 0
Query:  105 SFIPAFLRRRGGTTANPPPAIRPSTSPPP---SSPPSLDASRQPTTPHDLQWAAFAGPSDSPTRLRKRDLAIGGVLSVLATVAAVSVPLGYGGVVNVLLLPAETPLLERKMAFTKALRLLACIYSAEPFLTWVYIRHMTGLFSKGVLNLKNAVFTRLLEQDVAFFDRAGPGEITSYLSQDISGLKDILYGNLQRDRGLRALLEAVVGTI-LLFKLQPRLGLVFSLVIPTVATITAQLGRRLTRTILLEGRALAAENGCAIEVVRNIREVKSFAAEGKETARYFSRLWRTQTLSAQAGRNRGLMESCSRFAIYFSIFTVSMLGGSLVQRGEMGAASLVAFIGYCF 444
            S +    RRR G  A       P+  P P      P+ D    P  P  + W+       S     K  +A+     V  T   +++P+  G     L      PL        + L  +A +YS EP  T +++ +MT ++   + NL+  +F ++L Q V FFDR   GE+T  L+ D+  LKDI+  N+ RDRGLRAL E VVGTI +LF L  +L  + +L++  ++ + A   R      +  G   A+ + CA E    IR V+SFA E ++ + + + +   Q    + G  +   ES +R  +Y S+  +  LGGS V+ GE+   ++V+FIGY F
Sbjct:   50 SHVTGVRRRRSGGHARAAYVSAPAADPDPVAKDESPAADVLSLP--PVAISWSVIW----SLLSRHKIRMAVSLASLVGCTSCTLAMPIFSGKFFQTLTGTVSEPLW-------RLLSQIAFLYSLEPIFTIIFVTNMTIIWESVMANLRGQIFRQILIQKVEFFDRHKVGELTGLLTSDLGSLKDIVNENISRDRGLRALSE-VVGTICILFTLSTQLAPILALLMVVISVLVAVFKRSTVPVFISHGMVQASISDCATETFSAIRTVRSFAGEKRQFSIFRNLVLAYQNNGIKLGTLKSANESLTRTVVYISLMALYCLGGSKVKAGELSVGTMVSFIGYTF 379          
BLAST of EWM21991.1 vs. NCBI_GenBank
Match: gi|699262786|gb|AIU41635.1| (ABC transporter family protein [Hevea brasiliensis])

HSP 1 Score: 147.517 bits (371), Expect = 6.747e-35
Identity = 102/321 (31.78%), Postives = 163/321 (50.78%), Query Frame = 0
Query:  129 TSPPPSSPPSLDASRQPTTPHDLQWAAFAGPSDSPTRLRKRDLAIGGVLSVLA----TVAAVSVPLGYGGVVNVLLLPAETPLLERKMAFTKALRLLACIYSAEPFLTWVYIRHMTGLFSKGVLNLKNAVFTRLLEQDVAFFDRAGPGEITSYLSQDISGLKDILYGNLQRDRGLRALLEAVVGTI-LLFKLQPRLGLVFSLVIPTVATITAQLGRRLTRTILLEGRALAAENGCAIEVVRNIREVKSFAAEGKETARYFSRLWRTQTLSAQAGRNRGLMESCSRFAIYFSIFTVSMLGGSLVQRGEMGAASLVAFIGYCF 444
            + PP  S P        +T  ++Q           + L K  L +G  +SVLA    T   +S+PL  G    VL+     PL        + L  +  +YS EP  T +++ +M  ++ K +  L+  +F R+L Q V FFDR   GE+++ L+ D+  LKDI+  N+ RDRG RAL E V+GTI +LF L P+L  +  +++ +V+ + A   R         G A A+ + C  E    IR V+SF+ E ++   + S++   Q    + G  + + ES +R A+Y S+  +  LGGS V+ GE+   ++ +FIGY F
Sbjct:   97 SGPPTLSEPDPKVDASESTTEEVQSTKLISWGLLWSLLLKHKLRLG--VSVLALVGCTTCTLSMPLFSGRFFEVLIGARPEPLW-------RLLSKVGLLYSLEPICTVIFVVNMNAVWEKVMSRLRAHIFRRVLIQKVEFFDRYKIGELSALLTFDLGSLKDIVNENISRDRGFRALSE-VIGTICILFALAPQLAPILGILMLSVSVLVATYKRSTIPVFKAHGMAQASISDCVTETFSAIRTVRSFSGEKRQMLMFGSQVLAYQGSGIKLGTFKSVNESLTRIAVYISLMALYCLGGSKVKAGELSVGTVASFIGYTF 407          
BLAST of EWM21991.1 vs. NCBI_GenBank
Match: gi|970017204|ref|XP_015069729.1| (PREDICTED: ABC transporter B family member 28 isoform X3 [Solanum pennellii])

HSP 1 Score: 147.132 bits (370), Expect = 1.272e-34
Identity = 92/267 (34.46%), Postives = 144/267 (53.93%), Query Frame = 0
Query:  179 VLATVAAVSVPLGYGGVVNVLLLPAETPLLERKMAFTKALRLLACIYSAEPFLTWVYIRHMTGLFSKGVLNLKNAVFTRLLEQDVAFFDRAGPGEITSYLSQDISGLKDILYGNLQRDRGLRALLEAVVGTI-LLFKLQPRLGLVFSLVIPTVATITAQLGRRLTRTILLEGRALAAENGCAIEVVRNIREVKSFAAEGKETARYFSRLWRTQTLSAQAGRNRGLMESCSRFAIYFSIFTVSMLGGSLVQRGEMGAASLVAFIGYCF 444
            V+ T  ++S+PL  G    VL+     PLLE        L  +A +Y+ EP  T +Y+ ++T ++ K + +L+  +F R+L Q + FFDR   GE+T+ L+ D+  LK+I+  N  RDRG RAL E VVGT+ LLF L P+L  +  L+I  V+ + A   R         G   A+      E    IR V+SF+ E ++ + +  ++   ++ S + G  +   ES +R AIY S+  +  LGGS V+ GE+    + +FIGY F
Sbjct:  121 VVCTTCSLSLPLLSGRFFEVLIGTRTDPLLE-------LLSKVALLYTLEPIFTIIYVANITSIWEKVMSSLRGQIFRRVLIQKIDFFDRYKVGELTALLTSDLGSLKNIVSENTSRDRGFRALSE-VVGTLSLLFALSPQLAPILGLLILAVSILVALFKRSTVNVFQAHGLVQASIADSVTESFSAIRTVRSFSGEKRQMSVFARQVLEFESSSIKIGTFKSFHESVTRVAIYISLMALYCLGGSKVKAGELSVGIMASFIGYTF 379          
BLAST of EWM21991.1 vs. NCBI_GenBank
Match: gi|1104613189|ref|XP_019068360.1| (PREDICTED: ABC transporter B family member 28 isoform X2 [Solanum lycopersicum])

HSP 1 Score: 146.747 bits (369), Expect = 1.468e-34
Identity = 92/267 (34.46%), Postives = 144/267 (53.93%), Query Frame = 0
Query:  179 VLATVAAVSVPLGYGGVVNVLLLPAETPLLERKMAFTKALRLLACIYSAEPFLTWVYIRHMTGLFSKGVLNLKNAVFTRLLEQDVAFFDRAGPGEITSYLSQDISGLKDILYGNLQRDRGLRALLEAVVGTI-LLFKLQPRLGLVFSLVIPTVATITAQLGRRLTRTILLEGRALAAENGCAIEVVRNIREVKSFAAEGKETARYFSRLWRTQTLSAQAGRNRGLMESCSRFAIYFSIFTVSMLGGSLVQRGEMGAASLVAFIGYCF 444
            V+ T  ++S+PL  G    VL+     PLLE        L  +A +Y+ EP  T +Y+ ++T ++ K + +L+  +F R+L Q + FFDR   GE+T+ L+ D+  LK+I+  N  RDRG RAL E VVGT+ LLF L P+L  +  L+I  V+ + A   R         G   A+      E    IR V+SF+ E ++ + +  ++   ++ S + G  +   ES +R AIY S+  +  LGGS V+ GE+    + +FIGY F
Sbjct:  121 VICTTCSLSLPLLSGRFFEVLIGTRTDPLLE-------LLSKVALLYTLEPIFTIIYVANITSIWEKVMSSLRAQIFRRVLIQKIDFFDRYKVGELTALLTSDLGSLKNIVSENTSRDRGFRALSE-VVGTLSLLFALSPQLAPILGLLILAVSILVALFKRSTVNVFQAHGLVQASIADSVTESFSAIRTVRSFSGEKRQMSVFARQVLEFESSSIKIGTFKSFHESVTRVAIYISLMALYCLGGSKVKAGELSVGIMASFIGYTF 379          
The following BLAST results are available for this feature:
BLAST of EWM21991.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102380|gb|EWM21991.1|0.000e+0100.00abc transporter b family member 28 [Nannochloropsi... [more]
gi|585102381|gb|EWM21992.1|0.000e+099.11abc transporter b family member 28 [Nannochloropsi... [more]
gi|873218424|emb|CEM39524.1|6.558e-4636.23unnamed protein product [Vitrella brassicaformis C... [more]
gi|1104661644|ref|XP_019081606.1|1.091e-3932.61PREDICTED: ABC transporter B family member 28 [Vit... [more]
gi|743828577|ref|XP_010933902.1|6.350e-3632.93PREDICTED: ABC transporter B family member 28 isof... [more]
gi|1052184927|ref|XP_008795363.2|1.666e-3531.63PREDICTED: ABC transporter B family member 28 [Pho... [more]
gi|695014246|ref|XP_009393935.1|3.875e-3530.81PREDICTED: ABC transporter B family member 28 [Mus... [more]
gi|699262786|gb|AIU41635.1|6.747e-3531.78ABC transporter family protein [Hevea brasiliensis... [more]
gi|970017204|ref|XP_015069729.1|1.272e-3434.46PREDICTED: ABC transporter B family member 28 isof... [more]
gi|1104613189|ref|XP_019068360.1|1.468e-3434.46PREDICTED: ABC transporter B family member 28 isof... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8708rna8708Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications