EWM22010.1, cds8664 (CDS) Nannochloropsis gaditana

Overview
NameEWM22010.1
Unique Namecds8664
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:605352..605519 -
Alignment locationKK037249.1:604432..605120 -
Alignment locationKK037249.1:603819..604227 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22010.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100742g2.9998.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:605352..605519 -
KK037249.1supercontigKK037249.1:604432..605120 -
KK037249.1supercontigKK037249.1:603819..604227 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Homology
[Close]
BLAST of EWM22010.1 vs. NCBI_GenBank
Match: gi|585102411|gb|EWM22010.1| (hypothetical protein Naga_100742g2 [Nannochloropsis gaditana])

HSP 1 Score: 858.981 bits (2218), Expect = 0.000e+0
Identity = 421/421 (100.00%), Postives = 421/421 (100.00%), Query Frame = 0 
Query:    1 MAFKAVIVSSFITSLAQGHIFSSWDSRTDTSIKEVVEIPPSGGSRPVGAFGVATGEYPATTQVDFKADATLAGGMYVKGFALSQAKYAEFRTACSQEGDKLVSVYEWGYGACDNFMGSLKEAIDPATTFFVGQVTPKQDGTGSTVKAAFQLLDGGEGLYVVFENLMGGPVTFSNAEFSIAGVAEPVQAGEDLVFPPATVHMSAAVVPLADEVPTEKTTVTFRAKNTDGGKQTALMLVNKEQMEPERLGCTFGFYFGWFKKHAPGQNVCKGADFTYTIDGDILTLKGVIKAVTPETAPQLLAGDIPVDPTSTLFQGDGDYAFDAEVHGADSMFVVIPNRRDTPVTVEGLTVKYQAANLVGHLAKESQKILDNGPATGVAIAVLVGVLALMMAAYCAGKRRAKATAEKTAEKVEGKPQGNALV 421
            MAFKAVIVSSFITSLAQGHIFSSWDSRTDTSIKEVVEIPPSGGSRPVGAFGVATGEYPATTQVDFKADATLAGGMYVKGFALSQAKYAEFRTACSQEGDKLVSVYEWGYGACDNFMGSLKEAIDPATTFFVGQVTPKQDGTGSTVKAAFQLLDGGEGLYVVFENLMGGPVTFSNAEFSIAGVAEPVQAGEDLVFPPATVHMSAAVVPLADEVPTEKTTVTFRAKNTDGGKQTALMLVNKEQMEPERLGCTFGFYFGWFKKHAPGQNVCKGADFTYTIDGDILTLKGVIKAVTPETAPQLLAGDIPVDPTSTLFQGDGDYAFDAEVHGADSMFVVIPNRRDTPVTVEGLTVKYQAANLVGHLAKESQKILDNGPATGVAIAVLVGVLALMMAAYCAGKRRAKATAEKTAEKVEGKPQGNALV
Sbjct:    1 MAFKAVIVSSFITSLAQGHIFSSWDSRTDTSIKEVVEIPPSGGSRPVGAFGVATGEYPATTQVDFKADATLAGGMYVKGFALSQAKYAEFRTACSQEGDKLVSVYEWGYGACDNFMGSLKEAIDPATTFFVGQVTPKQDGTGSTVKAAFQLLDGGEGLYVVFENLMGGPVTFSNAEFSIAGVAEPVQAGEDLVFPPATVHMSAAVVPLADEVPTEKTTVTFRAKNTDGGKQTALMLVNKEQMEPERLGCTFGFYFGWFKKHAPGQNVCKGADFTYTIDGDILTLKGVIKAVTPETAPQLLAGDIPVDPTSTLFQGDGDYAFDAEVHGADSMFVVIPNRRDTPVTVEGLTVKYQAANLVGHLAKESQKILDNGPATGVAIAVLVGVLALMMAAYCAGKRRAKATAEKTAEKVEGKPQGNALV 421
[Close]
BLAST of EWM22010.1 vs. NCBI_GenBank
Match: gi|553178613|ref|XP_005852581.1| (hypothetical protein NGA_0718700 [Nannochloropsis gaditana CCMP526] >gi|422295952|gb|EKU23251.1| hypothetical protein NGA_0718700 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 856.67 bits (2212), Expect = 0.000e+0
Identity = 420/421 (99.76%), Postives = 420/421 (99.76%), Query Frame = 0 
Query:    1 MAFKAVIVSSFITSLAQGHIFSSWDSRTDTSIKEVVEIPPSGGSRPVGAFGVATGEYPATTQVDFKADATLAGGMYVKGFALSQAKYAEFRTACSQEGDKLVSVYEWGYGACDNFMGSLKEAIDPATTFFVGQVTPKQDGTGSTVKAAFQLLDGGEGLYVVFENLMGGPVTFSNAEFSIAGVAEPVQAGEDLVFPPATVHMSAAVVPLADEVPTEKTTVTFRAKNTDGGKQTALMLVNKEQMEPERLGCTFGFYFGWFKKHAPGQNVCKGADFTYTIDGDILTLKGVIKAVTPETAPQLLAGDIPVDPTSTLFQGDGDYAFDAEVHGADSMFVVIPNRRDTPVTVEGLTVKYQAANLVGHLAKESQKILDNGPATGVAIAVLVGVLALMMAAYCAGKRRAKATAEKTAEKVEGKPQGNALV 421
            MAFKAVIVSSFITSLAQGHIFSSWDSRTDTSIKEVVEIPPSGGSRPVGAFGVATGEYPATTQVDFKADATLAGGMYVKGFALSQAKYAEFRTACSQEGDKLVSVYEWGYGACDNFMGSLKEA DPATTFFVGQVTPKQDGTGSTVKAAFQLLDGGEGLYVVFENLMGGPVTFSNAEFSIAGVAEPVQAGEDLVFPPATVHMSAAVVPLADEVPTEKTTVTFRAKNTDGGKQTALMLVNKEQMEPERLGCTFGFYFGWFKKHAPGQNVCKGADFTYTIDGDILTLKGVIKAVTPETAPQLLAGDIPVDPTSTLFQGDGDYAFDAEVHGADSMFVVIPNRRDTPVTVEGLTVKYQAANLVGHLAKESQKILDNGPATGVAIAVLVGVLALMMAAYCAGKRRAKATAEKTAEKVEGKPQGNALV
Sbjct:    1 MAFKAVIVSSFITSLAQGHIFSSWDSRTDTSIKEVVEIPPSGGSRPVGAFGVATGEYPATTQVDFKADATLAGGMYVKGFALSQAKYAEFRTACSQEGDKLVSVYEWGYGACDNFMGSLKEATDPATTFFVGQVTPKQDGTGSTVKAAFQLLDGGEGLYVVFENLMGGPVTFSNAEFSIAGVAEPVQAGEDLVFPPATVHMSAAVVPLADEVPTEKTTVTFRAKNTDGGKQTALMLVNKEQMEPERLGCTFGFYFGWFKKHAPGQNVCKGADFTYTIDGDILTLKGVIKAVTPETAPQLLAGDIPVDPTSTLFQGDGDYAFDAEVHGADSMFVVIPNRRDTPVTVEGLTVKYQAANLVGHLAKESQKILDNGPATGVAIAVLVGVLALMMAAYCAGKRRAKATAEKTAEKVEGKPQGNALV 421
The following BLAST results are available for this feature:
BLAST of EWM22010.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 2
Match NameE-valueIdentityDescription
gi|585102411|gb|EWM22010.1|0.000e+0100.00hypothetical protein Naga_100742g2 [Nannochloropsi... [more]
gi|553178613|ref|XP_005852581.1|0.000e+099.76hypothetical protein NGA_0718700 [Nannochloropsis ... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8693rna8693Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications