EWM22016.1, cds8656 (CDS) Nannochloropsis gaditana

Overview
NameEWM22016.1
Unique Namecds8656
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:590027..590037 -
Alignment locationKK037249.1:589712..589865 -
Alignment locationKK037249.1:588433..589572 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22016.1
Productconserved unknown protein
Orig transcript idgnl|cribi|Naga_100361g4.4769.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:590027..590037 -
KK037249.1supercontigKK037249.1:589712..589865 -
KK037249.1supercontigKK037249.1:588433..589572 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0016788hydrolase activity, acting on ester bonds
Vocabulary: Biological Process
TermDefinition
GO:0009987cellular process
GO:0006810transport
GO:0006629lipid metabolic process
GO:0006505GPI anchor metabolic process
GO:0006886intracellular protein transport
Vocabulary: INTERPRO
TermDefinition
IPR029058AB_hydrolase
IPR012908PGAP1-like
Homology
BLAST of EWM22016.1 vs. NCBI_GenBank
Match: gi|585102422|gb|EWM22016.1| (conserved unknown protein [Nannochloropsis gaditana])

HSP 1 Score: 855.899 bits (2210), Expect = 0.000e+0
Identity = 434/434 (100.00%), Postives = 434/434 (100.00%), Query Frame = 0
Query:    1 MAASSPWSCPGPAHAFSQSSQALFLKPPAAGESTQSAFANNVKPENGTLSPYHVPSERLPFLRSTTPALSSPPSTPSLPRAVVIIPGYASDASLYKRLENSLRARGFPCWTVPISAYMWVPTFGGRSIRPILDRIHETVLDVALSDRPLPSPPFPAPASEAEAEKAAAPPAPPAPPGTSSSAPGSSAAPAKTFALLNFLRELLDPAKGLQPPPLPSPSSVPPSARRYDVALVGHSAGGWVARIYLSSVPYDGRAYQGSRFVSTLITLGSPHVFPSRYRDRAVGKVPYALRNLKFVEESCGRDGGGGVRMVCVGSRAVRGRSWLGGRVRDWAASSYALCGYEEEVGGEVGGKGGVEGDGITPVESALGLPGAVRVELEGEVLHGPEVERRGRRWYGTDPWPLERWVSYLREDGKGEGEGEGENRWRERDVGVGAG 434
            MAASSPWSCPGPAHAFSQSSQALFLKPPAAGESTQSAFANNVKPENGTLSPYHVPSERLPFLRSTTPALSSPPSTPSLPRAVVIIPGYASDASLYKRLENSLRARGFPCWTVPISAYMWVPTFGGRSIRPILDRIHETVLDVALSDRPLPSPPFPAPASEAEAEKAAAPPAPPAPPGTSSSAPGSSAAPAKTFALLNFLRELLDPAKGLQPPPLPSPSSVPPSARRYDVALVGHSAGGWVARIYLSSVPYDGRAYQGSRFVSTLITLGSPHVFPSRYRDRAVGKVPYALRNLKFVEESCGRDGGGGVRMVCVGSRAVRGRSWLGGRVRDWAASSYALCGYEEEVGGEVGGKGGVEGDGITPVESALGLPGAVRVELEGEVLHGPEVERRGRRWYGTDPWPLERWVSYLREDGKGEGEGEGENRWRERDVGVGAG
Sbjct:    1 MAASSPWSCPGPAHAFSQSSQALFLKPPAAGESTQSAFANNVKPENGTLSPYHVPSERLPFLRSTTPALSSPPSTPSLPRAVVIIPGYASDASLYKRLENSLRARGFPCWTVPISAYMWVPTFGGRSIRPILDRIHETVLDVALSDRPLPSPPFPAPASEAEAEKAAAPPAPPAPPGTSSSAPGSSAAPAKTFALLNFLRELLDPAKGLQPPPLPSPSSVPPSARRYDVALVGHSAGGWVARIYLSSVPYDGRAYQGSRFVSTLITLGSPHVFPSRYRDRAVGKVPYALRNLKFVEESCGRDGGGGVRMVCVGSRAVRGRSWLGGRVRDWAASSYALCGYEEEVGGEVGGKGGVEGDGITPVESALGLPGAVRVELEGEVLHGPEVERRGRRWYGTDPWPLERWVSYLREDGKGEGEGEGENRWRERDVGVGAG 434          
BLAST of EWM22016.1 vs. NCBI_GenBank
Match: gi|298708928|emb|CBJ30883.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 196.052 bits (497), Expect = 5.997e-55
Identity = 134/341 (39.30%), Postives = 175/341 (51.32%), Query Frame = 0
Query:   73 PSTPSLPRAVVIIPGYASDASLYKRLENSLRARGFPCWTVPISAYMWVPTFGGRSIRPILDRIHETVLDVALSDRPLPSPPFPAPASEAEAEKAAAPPAPPAPPGTSSSAPGSSAAPAKTFALLNFLRELLDPAKG---LQPPPLPSPSSVPPSARRYDVALVGHSAGGWVARIYLSSVPYDGRAYQGSRFVSTLITLGSPHVFPSRYRDRAVGKVPYALRNLKFVEESCGRDGGGG----VRMVCVGSRAVRGRSWLGGRVRDWAASSYALCGYEEEVGGEVGGKGGVEGDGITPVESALGLPGAVR-VELEGEVLHGPEVERRGRRWYGTDPWPLERWV 405
            P         VIIPG+A+DA ++++L + L  RG     VPI  Y W+PT GGRS+RPILDRIHETV+    +                  E    P A   P   S  AP         +   +F  E+ DP +G   + P  LP   S P    R  V L+ HSAGGW++RIYLS   YDGR Y  S  V+ L+TLG+PHV  +  + R   ++P++ RN KFVEE C  + GG     +  VC+G  A+ GRS  GG  +D    SY LC           G G   GDGITP++SA  + GA R VELEG VLH     R G +WYG+D   ++ W+
Sbjct:   29 PEVTKWRHKAVIIPGFATDARVFEKLCHRLERRGVASVVVPIRWYHWLPTLGGRSVRPILDRIHETVIRCVCAQ-----------------EHKDMPYAFNEPGLQSEVAP---------YTAEDFWAEMGDPKRGAHHMGPIDLPVLPSKPSVDER--VVLIAHSAGGWMSRIYLSEACYDGRIYNASHAVNGLVTLGTPHVRLTDDKGRH-RELPFS-RNFKFVEERCTGEKGGDWEKIIPTVCIGGSALEGRSTFGGMFKDLVYQSYELC----------CGDGSGTGDGITPLKSAFDMAGAKRYVELEG-VLHAA---RMGGKWYGSDD-VIDSWL 324          
BLAST of EWM22016.1 vs. NCBI_GenBank
Match: gi|1129208058|gb|OLQ09836.1| (hypothetical protein AK812_SmicGene6514 [Symbiodinium microadriaticum])

HSP 1 Score: 130.954 bits (328), Expect = 2.803e-29
Identity = 105/360 (29.17%), Postives = 158/360 (43.89%), Query Frame = 0
Query:   83 VIIPGYASDASLYKRLENSLRARGFPCWTVPISAYMWVPTFGGRSIRPILDRI-HETVLDVALSDRPLPSPPFPAPASEAEAEKAAAPPAPPAPPGTSSSAPGSSAAPAKTFALLNFLRELLD-PAKGLQPPPLPSPSSVPP-------------------SARRYDVALVGHSAGGWVARIYLSSVPYDGRAYQGSRFVSTLITLGSPHVFPSRYRDRAVGKVPYALRNLKFVEESCGRDGGGGVRMVCVGSRAVRGRSWLGGRVRDWAASSYALCGYEEEVGGEVGGKGGVEGDGITPVESALGLPGAVRVELEGEVLHGPE----------VERR--GRRWYGTDPWPLERWVSYLR 409
            +++PG+  D   ++ L   +R  G+     PIS + W+P  GGRS+RPIL+RI H      AL D                                     G+++ P   + + +FL +L + P   L+      P+  PP                     RR  +ALV HSA GW++R+YLS+VPY GRA+ G+  V +++ LGSPH   +    +A          L ++E    R     VR +CVGS   +      G   D    +YA CG   +          V+GDG+TP+ SAL    A ++EL+G V H PE           E R  G+ WYG+ P  L++W+ +L+
Sbjct:  377 LVVPGFLGDCGDFEELAEEMRQAGYKAVVAPISWWHWIPCIGGRSMRPILERIDHAVNQAFALED-------------------------------------GATSVPTPAYNVADFLTDLFNNPGGFLKVGGTDDPAEYPPFEPCGADFVSTSRSQWPGTDGRR--LALVAHSAAGWISRLYLSNVPYGGRAFDGAEKVHSVVCLGSPHFIANNTVYKA----------LTYLESRAERTLPENVRFLCVGSSGTK-----AGLASDMTRGAYAFCGAAPD-------DESVDGDGMTPLFSALAFEPAEKLELDG-VTHAPEYPAFGPSSTLAEERASGKPWYGS-PEILKKWLPWLQ 673          
BLAST of EWM22016.1 vs. NCBI_GenBank
Match: gi|1072238950|gb|OEU23677.1| (hypothetical protein FRACYDRAFT_205669 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 108.227 bits (269), Expect = 3.422e-22
Identity = 99/358 (27.65%), Postives = 157/358 (43.85%), Query Frame = 0
Query:   81 AVVIIPGYASDASLYKRLENSLRARGFPCWTVPISAYMWVPTFGGRSIRPILDRIHETVLDVAL---------SDRPLPSPPFPAPASEAEAEKAAAPPAPPAPPGTSSSAPGSSAAPAKTFALLNFLRELLDPAKGLQPPPLPSPSSVPPSARRYDVALVGHSAGGWVARIYLSSVPYDGRAYQGSRFVSTLITLGSPHVFPSRYRDRAVGKVPYALRNLKFVEESCGRDG---GGGVRMVCVGSRAVRGRSWLGGRVRDWAASSYALCGYEEEVGGEVGGKGGV--EGDGITPVESALGLPGAVRVELE-----------GEVLHGPEV---ERRGRRWYGTDPWPLERWVSYLRE 410
            A VI+PG+ + A  +  L  +L+ RG P   VP+  + W+P  GGRS RPIL+RI  TV  +           +D  +  PP+     +   +    P       G+S         P   F+                    P PSS   +  +  V L+GHSAGGW++R+YLSS  Y G++Y GS+++ +L+TLG+PH         A G     +  +   E    R      GGVR + V     +G  W           +Y+ C  +        G  G+  +GDG+TP+ SAL +PG+  + +E           G  L  PE+    + G+ WYG++   +++W  ++ +
Sbjct:  100 AAVIVPGFLTGADEFGPLCKALKERGIPTVAVPMPNWHWLPCLGGRSARPILERIDYTVKHLIAHYEGVNGNNNDDEIYIPPYEYSLLDLYKDFRENPGGALEVGGSSRVDDYPVVEPRGRFS--------------------PPPSSSSTTTPKKKVVLIGHSAGGWISRVYLSSSNYGGKSYDGSKYIHSLVTLGAPHA-------DAPGPAFDGISWINKAENERERRKHPRKGGVRSLSVAGTGFKGGDW-----GSLTKGAYSFCCPD--------GSDGLSYDGDGVTPIFSALLMPGSDSLVVENVTHFCWSDVFGGSLVAPELTEDHKNGKNWYGSNE-IIDQWSKFIID 416          
BLAST of EWM22016.1 vs. NCBI_GenBank
Match: gi|499750255|ref|WP_011430989.1| (hypothetical protein [Synechococcus sp. JA-3-3Ab] >gi|86555357|gb|ABD00315.1| conserved hypothetical protein [Synechococcus sp. JA-3-3Ab])

HSP 1 Score: 104.375 bits (259), Expect = 4.496e-22
Identity = 78/187 (41.71%), Postives = 97/187 (51.87%), Query Frame = 0
Query:  229 VALVGHSAGGWVARIYLSSVPYDGRAYQGSRFVSTLITLGSPHVFPSRYRDRAVGKVPYALRNLKFVEESCGRDGGGGVRMVCVGSRAVRGRS------WLGGRVRDWAA-SSYALCGYEEEVGGEVGGKGGVEGDGITPVESALGLPGAVRVELEGEVLHGPEVERRGRRWYGTDPWPLERWVSYL 408
            V LV HSAGGW+ARIYL SVPY G+ +QG   VSTLI+LGSPH    R+            RNL FV           V+ VCV  +A++GR       W       W A +SY L            G+G + GDGITP+E+A  LPGA+ + L      G    R GRRWYG+ P  ++RW  YL
Sbjct:   75 VNLVAHSAGGWIARIYLGSVPYGGQVWQGREHVSTLISLGSPHTSRERWTR----------RNLDFVNTHYPGAFWPQVKYVCVAGKAIQGRRVGLGSLWRQEHYLAWLAYNSYRLT----------AGQGELWGDGITPIEAA-HLPGAINLTLPDCHHSG----RGGRRWYGS-PEVVDRWAPYL 235          
BLAST of EWM22016.1 vs. NCBI_GenBank
Match: gi|499370239|ref|WP_011057817.1| (lipase [Thermosynechococcus elongatus] >gi|22299525|ref|NP_682772.1| lipase [Thermosynechococcus elongatus BP-1] >gi|22295708|dbj|BAC09534.1| tlr1982 [Thermosynechococcus elongatus BP-1])

HSP 1 Score: 98.9821 bits (245), Expect = 3.010e-20
Identity = 86/250 (34.40%), Postives = 117/250 (46.80%), Query Frame = 0
Query:  183 PGSSAAPAKTFALLNFLREL-----LDPAKGLQPPPLPSPSSVPPSARRYD--------------VALVGHSAGGWVARIYLSSVPYDGRAYQGSRFVSTLITLGSPHVFPSRYRDRAVGKVPYALRNLKFVEESCGRDGGGGVRMVCVGSRAVRGRSWLGGRVRDW-AASSYALCGYEEEVGGEVGGKGGVEGDGITPVESALGLPGAVRVELEGEVLHGPEVERRGR---RWYGTDPWPLERWVSYLR 409
            PG  AA    + L ++LR+L     + P +     P     SV P     D              V L+GHSAGGW++RIYL   PYDG+ + G ++V TLITLG+PH    R ++R      +  RNL FV  +      G +R VC+  +A+ G S   G   +W    SY L            G+G   GDG+TPV +A  L GA  +  E +VLH P    R R    WYG+ P  +  W  YL+
Sbjct:    8 PGYLAAAPDYYPLRDYLRQLGFVVEVVPLRVRSWFPTLGGRSVAPILEALDTTIQSVLNETGASAVHLIGHSAGGWISRIYLGDQPYDGQVWAGHQWVQTLITLGTPH----RSQER------WTRRNLDFVNTTYPGAYYGQIRYVCLAGKAIYGTS--RGSFANWFTYQSYKL----------TCGEGACWGDGVTPVAAA-HLEGAENLVYE-DVLHAPRSRLRDRPDAPWYGS-PEIVAHWQQYLK 232          
BLAST of EWM22016.1 vs. NCBI_GenBank
Match: gi|503087236|ref|WP_013322091.1| (hypothetical protein [Cyanothece sp. PCC 7822] >gi|306982104|gb|ADN13985.1| conserved hypothetical protein [Cyanothece sp. PCC 7822])

HSP 1 Score: 98.9821 bits (245), Expect = 3.528e-20
Identity = 74/202 (36.63%), Postives = 102/202 (50.50%), Query Frame = 0
Query:  219 SVPPSARRYD---VALVGHSAGGWVARIYLSSVPYDGR--------AYQGSRFVSTLITLGSPHVFPSRYRDRAVGKVPYALRNLKFVEESCGRDGGGGVRMVCVGSRAVRGRSWLGGRVRDWAASSYALCGYEEEVGGEVGGKGGVEGDGITPVESALGLPGAVRVELEGEVLHGPEVERRGRRWYGTDPWPLERWVSYLR 409
            +V  +  +Y+   V L+GHSAGGW+ARIYL   PY+           +    FV+TL+TLG+PH+   R+            RNL FV+ +        VR VC+  +AV G+  LG  +   A +SY L            GKG   GDGI PVE+A  L GA+ + LEG V+H P        WYG+ P  L  W++YL+
Sbjct:   61 TVKQTLLKYNASQVNLIGHSAGGWIARIYLGEKPYNVHGDLLDLAVTWNAHGFVNTLVTLGTPHISQERWTK----------RNLDFVKYNYPGAFYPDVRYVCIAGKAVYGQRRLGSWL---AYNSYLL----------TCGKGNCWGDGIIPVEAA-HLDGAINLTLEG-VMHSP---MSSGLWYGS-PTVLTNWINYLK 233          
BLAST of EWM22016.1 vs. NCBI_GenBank
Match: gi|748152460|ref|WP_039726787.1| (lipase [Lyngbya confervoides] >gi|746957419|gb|KIF14958.1| lipase [Aphanocapsa montana BDHKU210001] >gi|746984188|gb|KIF39880.1| lipase [Lyngbya confervoides BDU141951])

HSP 1 Score: 98.9821 bits (245), Expect = 3.737e-20
Identity = 73/192 (38.02%), Postives = 94/192 (48.96%), Query Frame = 0
Query:  229 VALVGHSAGGWVARIYLSSVPYD--------GRAYQGSRFVSTLITLGSPHVFPSRYRDRAVGKVPYALRNLKFVEESCGRDGGGGVRMVCVGSRAVRGRSWLGGRVRDW-AASSYALCGYEEEVGGEVGGKGGVEGDGITPVESALGLPGAVRVELEGEVLHGPEVERRGRRWYGTDPWPLERWVSYLRED 411
            V LV HSAGGW+ARIYL   PYD          A+ G R V TLITLG+PH    R          +  RNL FV ++        VR VC   +A+ G+ W     R W   +SY +           GG G   GDGITP+ +A  L GA  + L+ +V H P   + G  WYGT P  ++ W +YL+ D
Sbjct:   74 VNLVCHSAGGWIARIYLGDEPYDVHPADRDRANAWSGHRHVQTLITLGTPHTSQER----------WTRRNLDFVNQTYPGAYHADVRYVCFAGKAIFGQRW-----RTWFTYNSYQI----------TGGDGACWGDGITPIPAA-HLEGATNLVLD-DVCHSP---KPGVAWYGT-PSVVDEWATYLQVD 234          
BLAST of EWM22016.1 vs. NCBI_GenBank
Match: gi|1200103673|ref|WP_087543086.1| (lipase [Nostocales cyanobacterium HT-58-2] >gi|1199831789|gb|ARV61603.1| lipase [Nostocales cyanobacterium HT-58-2])

HSP 1 Score: 98.5969 bits (244), Expect = 4.280e-20
Identity = 76/187 (40.64%), Postives = 95/187 (50.80%), Query Frame = 0
Query:  228 DVALVGHSAGGWVARIYLSSVPYDGR------AYQGSRFVSTLITLGSPHVFPSRYRDRAVGKVPYALRNLKFVEESCGRDGGGGVRMVCVGSRAVRGRSWLGGRVRDWAASSYALCGYEEEVGGEVGGKGGVEGDGITPVESALGLPGAVRVELEGEVLHGPEVERRGRRWYGTDPWPLERWVSYL 408
             V L+GHSAGGW++RIYL   PY GR      A++    V+TLITLG+PH    R+             NL FV ++        VR VCV  + + G+   GG +   A SSY L            GKG   GDGITP+E+A  L GA  + LEG V H P   R    WYG+ P PL+ WV YL
Sbjct:   73 QVNLIGHSAGGWISRIYLGEKPYSGRGEVTSFAWKAHPLVATLITLGTPHASQERWTR----------WNLDFVNQNYPGAFYKNVRYVCVAGKTIFGQRRRGGWL---AYSSYQLT----------CGKGNTWGDGITPIEAA-HLEGAENIVLEG-VRHSP---RSSPMWYGS-PGPLKDWVKYL 230          
BLAST of EWM22016.1 vs. NCBI_GenBank
Match: gi|499751420|ref|WP_011432154.1| (hypothetical protein [Synechococcus sp. JA-2-3B'a(2-13)] >gi|86556538|gb|ABD01495.1| conserved hypothetical protein [Synechococcus sp. JA-2-3B'a(2-13)])

HSP 1 Score: 97.8265 bits (242), Expect = 9.515e-20
Identity = 75/187 (40.11%), Postives = 93/187 (49.73%), Query Frame = 0
Query:  229 VALVGHSAGGWVARIYLSSVPYDGRAYQGSRFVSTLITLGSPHVFPSRYRDRAVGKVPYALRNLKFVEESCGRDGGGGVRMVCVGSRAVRGRS------WLGGRVRDWAA-SSYALCGYEEEVGGEVGGKGGVEGDGITPVESALGLPGAVRVELEGEVLHGPEVERRGRRWYGTDPWPLERWVSYL 408
            V LV HSAGGW+ARIYL SVPY G+ +QG   V+ LI+LGSPH    R+            RNL FV           V+ VCV  R ++G+       W       W A +SY L            G+G + GDGITP+E+A  L GAV + L      G    R GRRWYG+ P  +E W  YL
Sbjct:   73 VNLVAHSAGGWIARIYLGSVPYGGQVWQGREQVAALISLGSPHTSRERWTK----------RNLDFVNTHYPGAFWPEVKYVCVAGRVIQGQRLSLGSLWRQEHYLAWLAYNSYWL----------TAGQGELWGDGITPIEAA-HLQGAVNLTLPNCYHSG----RGGRRWYGS-PEVVETWAQYL 233          
The following BLAST results are available for this feature:
BLAST of EWM22016.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102422|gb|EWM22016.1|0.000e+0100.00conserved unknown protein [Nannochloropsis gaditan... [more]
gi|298708928|emb|CBJ30883.1|5.997e-5539.30conserved unknown protein [Ectocarpus siliculosus][more]
gi|1129208058|gb|OLQ09836.1|2.803e-2929.17hypothetical protein AK812_SmicGene6514 [Symbiodin... [more]
gi|1072238950|gb|OEU23677.1|3.422e-2227.65hypothetical protein FRACYDRAFT_205669 [Fragilario... [more]
gi|499750255|ref|WP_011430989.1|4.496e-2241.71hypothetical protein [Synechococcus sp. JA-3-3Ab] ... [more]
gi|499370239|ref|WP_011057817.1|3.010e-2034.40lipase [Thermosynechococcus elongatus] >gi|2229952... [more]
gi|503087236|ref|WP_013322091.1|3.528e-2036.63hypothetical protein [Cyanothece sp. PCC 7822] >gi... [more]
gi|748152460|ref|WP_039726787.1|3.737e-2038.02lipase [Lyngbya confervoides] >gi|746957419|gb|KIF... [more]
gi|1200103673|ref|WP_087543086.1|4.280e-2040.64lipase [Nostocales cyanobacterium HT-58-2] >gi|119... [more]
gi|499751420|ref|WP_011432154.1|9.515e-2040.11hypothetical protein [Synechococcus sp. JA-2-3B'a(... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8685rna8685Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications