EWM22020.1, cds8654 (CDS) Nannochloropsis gaditana

Overview
NameEWM22020.1
Unique Namecds8654
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:582351..582541 +
Alignment locationKK037249.1:582635..582856 +
Alignment locationKK037249.1:583024..583147 +
Alignment locationKK037249.1:583274..583345 +
Alignment locationKK037249.1:583429..583500 +
Alignment locationKK037249.1:583682..583835 +
Alignment locationKK037249.1:583913..584508 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22020.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100361g2.4773.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:582351..582541 +
KK037249.1supercontigKK037249.1:582635..582856 +
KK037249.1supercontigKK037249.1:583024..583147 +
KK037249.1supercontigKK037249.1:583274..583345 +
KK037249.1supercontigKK037249.1:583429..583500 +
KK037249.1supercontigKK037249.1:583682..583835 +
KK037249.1supercontigKK037249.1:583913..584508 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR029069HotDog_dom
Homology
BLAST of EWM22020.1 vs. NCBI_GenBank
Match: gi|585102426|gb|EWM22020.1| (hypothetical protein Naga_100361g2 [Nannochloropsis gaditana])

HSP 1 Score: 978.008 bits (2527), Expect = 0.000e+0
Identity = 476/476 (100.00%), Postives = 476/476 (100.00%), Query Frame = 0
Query:    1 MPRSYTRYSTARGEGRIRIACRHSQARNLPQALFHAKTHAHCAGDTARVSLDIKMRSFWACVRRQDIFEKRCHRNVCHISSRSIGSTGHIGSGGTNAQGPQLFAFDEAVALREVSPSSPLSSHLPSRPRVFQGYLDERWSYGDAPNGGILTSMAITAARRLSSPARPDPLSVSTYFVKKALEKTPVFLHVTPLAASRSQETLQVTLVQENEARAHFLATFGALESFKGLDMNHLLPPVLPPRAHCLDLMALLHEEQPANHKIGDRIELWVPEESAFIKGIVRGEPINSMEEPCVLEGWGAFRAERAPDGEYGRDGAPASGLEGLSGSWRRRPCLTSLAFFNDAYPAPVQTYRGGSSRRDGGEMSQGLGGGTGNEGIEKEAGELGRENSGREPWAWIPSLELTTHFWESIPGPPTCEKKGEKARSQIASTHVPYLRLRFSTRFARRGLLFCDSEVWAEDASTLYSTSRQLARVLNPR 476
            MPRSYTRYSTARGEGRIRIACRHSQARNLPQALFHAKTHAHCAGDTARVSLDIKMRSFWACVRRQDIFEKRCHRNVCHISSRSIGSTGHIGSGGTNAQGPQLFAFDEAVALREVSPSSPLSSHLPSRPRVFQGYLDERWSYGDAPNGGILTSMAITAARRLSSPARPDPLSVSTYFVKKALEKTPVFLHVTPLAASRSQETLQVTLVQENEARAHFLATFGALESFKGLDMNHLLPPVLPPRAHCLDLMALLHEEQPANHKIGDRIELWVPEESAFIKGIVRGEPINSMEEPCVLEGWGAFRAERAPDGEYGRDGAPASGLEGLSGSWRRRPCLTSLAFFNDAYPAPVQTYRGGSSRRDGGEMSQGLGGGTGNEGIEKEAGELGRENSGREPWAWIPSLELTTHFWESIPGPPTCEKKGEKARSQIASTHVPYLRLRFSTRFARRGLLFCDSEVWAEDASTLYSTSRQLARVLNPR
Sbjct:    1 MPRSYTRYSTARGEGRIRIACRHSQARNLPQALFHAKTHAHCAGDTARVSLDIKMRSFWACVRRQDIFEKRCHRNVCHISSRSIGSTGHIGSGGTNAQGPQLFAFDEAVALREVSPSSPLSSHLPSRPRVFQGYLDERWSYGDAPNGGILTSMAITAARRLSSPARPDPLSVSTYFVKKALEKTPVFLHVTPLAASRSQETLQVTLVQENEARAHFLATFGALESFKGLDMNHLLPPVLPPRAHCLDLMALLHEEQPANHKIGDRIELWVPEESAFIKGIVRGEPINSMEEPCVLEGWGAFRAERAPDGEYGRDGAPASGLEGLSGSWRRRPCLTSLAFFNDAYPAPVQTYRGGSSRRDGGEMSQGLGGGTGNEGIEKEAGELGRENSGREPWAWIPSLELTTHFWESIPGPPTCEKKGEKARSQIASTHVPYLRLRFSTRFARRGLLFCDSEVWAEDASTLYSTSRQLARVLNPR 476          
BLAST of EWM22020.1 vs. NCBI_GenBank
Match: gi|553178919|ref|XP_005852622.1| (hypothetical protein NGA_0713700 [Nannochloropsis gaditana CCMP526] >gi|422295913|gb|EKU23212.1| hypothetical protein NGA_0713700 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 231.491 bits (589), Expect = 5.648e-70
Identity = 137/192 (71.35%), Postives = 141/192 (73.44%), Query Frame = 0
Query:   55 MRSFWACVRRQDIFEKRCHRNVCHISSRSIGSTGHIGSGGTNAQGPQLFAFDEAVALREVSPSSPLSSHLPSRPRVFQGYLDERWSYGDAPNGGILTSMAITAARRLSSPARPDPLSVSTYFVKK------------------------------------------ALEKTPVFLHVTPLAASRSQETLQV 204
            M    A +  QDIFEKRCHRN+CHISSRSI STGHIGSG TNAQGPQLFAFDEA+A+REVSPSSPLSSHLPSRPRVFQGYLDERWSYGDAPNGGILTSMAITAARRLSSPARPDPLSVSTYFVKK                                          ALEKTPVFLHVTPLAASRSQETLQV
Sbjct:    1 MHIVQATLLGQDIFEKRCHRNLCHISSRSIASTGHIGSGSTNAQGPQLFAFDEAMAMREVSPSSPLSSHLPSRPRVFQGYLDERWSYGDAPNGGILTSMAITAARRLSSPARPDPLSVSTYFVKKVRRGRVLGRGDEHRGDGQRELSTPFLPRLLAHSRARPSRCPQALEKTPVFLHVTPLAASRSQETLQV 192          
BLAST of EWM22020.1 vs. NCBI_GenBank
Match: gi|816956650|gb|AKF06156.1| (TesB-like acyl-CoA thioesterase 3 [Sandaracinus amylolyticus])

HSP 1 Score: 83.1889 bits (204), Expect = 2.956e-14
Identity = 98/346 (28.32%), Postives = 128/346 (36.99%), Query Frame = 0
Query:  131 FQGYLDERWSYGDAPNGGILTSMAITAARRLSSP-ARPDPLSVSTYFVKKALEKTPVFLHVTPLAASRSQETLQVTLVQENEARAHFLATFGALESFKGLDMNHLL--PPVLPPRAHCLDLMALLHEEQPANHKIGDRIELWV-PEESAFIKGIVRGEPINSMEEPCVLEGWGAFRAERAPDGEYGRDGAPASGLEGLSGSWRRRPCLTSLAFFNDAYPAPVQTYRGGSSRRDGGEMSQGLGGGTGNEGIEKEAGELGRENSGREPWAWIPSLELTTHFWESIPGPPTCEKKGEKARSQIASTHVPYLRLRFSTRFARRGLLFCDSEVWAEDASTLYSTSRQLARV 472
            F   L +RWS G APNGG L   A+ AAR L +    PDP S ST+F+  A    P  + V  + A +   T +  L QE       +ATFG L +        +   PP LPP   C           P+   IG+R+++ + P   +++ G        +  E   L GW   R  RAPD                           SL FF DA+P PV                                      +  R P  W+P+LELT H                +AR         +LR  F TR    G L  D E+W E   TL + SRQLARV
Sbjct:   27 FATTLTDRWSIGTAPNGGYL---AVVAARALGAVLPHPDPFSASTHFLSPA-RPGPAEIAVEIVRAGKGHSTGEARLFQEGREVLRMIATFGDLGALDASAPTAVTSAPPELPPIESCER-----SRPAPSVASIGERLDIAIAPGTLSWLSG--------AHNERAELAGWVRLRDGRAPDA-------------------------LSLLFFADAFPPPVLNL-----------------------------------SVVRTP--WVPTLELTVHV---------------RARPAPG-----WLRASFRTRALMHGYLEEDGEIWDEQG-TLVAMSRQLARV 272          
BLAST of EWM22020.1 vs. NCBI_GenBank
Match: gi|921303748|ref|WP_053238831.1| (thioesterase family protein [Sandaracinus amylolyticus])

HSP 1 Score: 82.8037 bits (203), Expect = 4.279e-14
Identity = 98/346 (28.32%), Postives = 128/346 (36.99%), Query Frame = 0
Query:  131 FQGYLDERWSYGDAPNGGILTSMAITAARRLSSP-ARPDPLSVSTYFVKKALEKTPVFLHVTPLAASRSQETLQVTLVQENEARAHFLATFGALESFKGLDMNHLL--PPVLPPRAHCLDLMALLHEEQPANHKIGDRIELWV-PEESAFIKGIVRGEPINSMEEPCVLEGWGAFRAERAPDGEYGRDGAPASGLEGLSGSWRRRPCLTSLAFFNDAYPAPVQTYRGGSSRRDGGEMSQGLGGGTGNEGIEKEAGELGRENSGREPWAWIPSLELTTHFWESIPGPPTCEKKGEKARSQIASTHVPYLRLRFSTRFARRGLLFCDSEVWAEDASTLYSTSRQLARV 472
            F   L +RWS G APNGG L   A+ AAR L +    PDP S ST+F+  A    P  + V  + A +   T +  L QE       +ATFG L +        +   PP LPP   C           P+   IG+R+++ + P   +++ G        +  E   L GW   R  RAPD                           SL FF DA+P PV                                      +  R P  W+P+LELT H                +AR         +LR  F TR    G L  D E+W E   TL + SRQLARV
Sbjct:   34 FATTLTDRWSIGTAPNGGYL---AVVAARALGAVLPHPDPFSASTHFLSPA-RPGPAEIAVEIVRAGKGHSTGEARLFQEGREVLRMIATFGDLGALDASAPTAVTSAPPELPPIESCER-----SRPAPSVASIGERLDIAIAPGTLSWLSG--------AHNERAELAGWVRLRDGRAPDA-------------------------LSLLFFADAFPPPVLNL-----------------------------------SVVRTP--WVPTLELTVHV---------------RARPAPG-----WLRASFRTRALMHGYLEEDGEIWDEQG-TLVAMSRQLARV 279          
BLAST of EWM22020.1 vs. NCBI_GenBank
Match: gi|493640900|ref|WP_006592605.1| (thioesterase family protein [Kineosphaera limosa] >gi|403210477|dbj|GAB96073.1| hypothetical protein KILIM_031_00450 [Kineosphaera limosa NBRC 100340])

HSP 1 Score: 67.3958 bits (163), Expect = 7.015e-9
Identity = 68/200 (34.00%), Postives = 94/200 (47.00%), Query Frame = 0
Query:  102 LFAFDEAVALREVSPSSPLSSHLPSRPRVFQGYLDERWSYGDAPNGGILTSMAITAARR-------LSSPARPDPLSVSTYFVKKALEKTPVFLHVTPLAAS--RSQETLQVTLVQENE----ARAHFLATFGALESFKGLDMNHLLPPVLPPRAHCLDL-MALLHEEQPANHKIGDRIEL----WVPEESAFIKGIVRG 283
            + AFDEA+ALR  +    L            GYLD  W+  DA NGG++ S+A TA R          S + PDPL++S YF+       P  + V P  AS  RS  T QV++ Q+       R   LATFG L +   +     +P V PP   CLD  +A  H   P   ++  R++     WV  E A  +G++RG
Sbjct:    1 MSAFDEAMALRAQADGGRL------------GYLDAGWNIIDAINGGVVMSVAATALRDELARSEGAGSVSHPDPLALSAYFLSA---TRPGDVRVFPQVASVGRSMSTGQVSVYQDGPDGPIERVRALATFGDLGAASDVARAPAMPDV-PPPGECLDAQLAPKHLLPPMMSRLELRLDPSCVGWVFGEPAR-RGVIRG 183          
BLAST of EWM22020.1 vs. NCBI_GenBank
Match: gi|1200322248|gb|OUU43102.1| (hypothetical protein CBC10_12850 [Gammaproteobacteria bacterium TMED50])

HSP 1 Score: 67.0106 bits (162), Expect = 9.239e-9
Identity = 35/95 (36.84%), Postives = 57/95 (60.00%), Query Frame = 0
Query:  131 FQGYLDERWSYGDAPNGGILTSMAITAARRLSSPARPDPLSVSTYFVKKALEKTPVFLHVTPLAASRSQETLQVTLVQENEARAHFLATFGALES 225
            + G+++ +WS GD PNGG L + A+TA + L+ P  PDPLSV+ ++++     T   +    + + R+  T + +L QE++AR   LA FG L S
Sbjct:   18 WXGHINGQWSIGDNPNGGYLVANAMTAIQTLA-PDHPDPLSVTAHYLRPGSPDTDCDIEARVIRSGRTLTTARASLSQESKARIEVLAAFGDLTS 111          
BLAST of EWM22020.1 vs. NCBI_GenBank
Match: gi|1026983436|ref|XP_016608145.1| (hypothetical protein SPPG_04448 [Spizellomyces punctatus DAOM BR117] >gi|907094362|gb|KND00106.1| hypothetical protein SPPG_04448 [Spizellomyces punctatus DAOM BR117])

HSP 1 Score: 65.855 bits (159), Expect = 2.481e-8
Identity = 43/144 (29.86%), Postives = 69/144 (47.92%), Query Frame = 0
Query:  103 FAFDEAVALREVSPSSPLSSHLPSRPRVFQGYLDERWSYGDAPNGGILTSMAITAARRLSSPARPDPLSVSTYFVKKALEKTPVFLHVTPLAASRSQETLQVTLVQENEARAHFLATFGALESFKGLDMNHLLPPVLPPRAHCL 246
            F FD+ +A++EVS  SP SS       V++  + + W  G  P+GG + S+ ++AA    +  RPDP+S++ YF++      P  L VT + A R     Q+   Q          T+G +   +G     + P  LPP + C 
Sbjct:    6 FDFDKVIAVKEVS-RSPTSS-------VWKADISDEWMIGSVPHGGYILSVILSAASAHFAGNRPDPISINAYFLRPTAANVPAILTVTDIKAGR-YSIAQIITEQAGIVTQFATVTYGNISEEQG-PTRVIDPDRLPPPSECF 139          
BLAST of EWM22020.1 vs. NCBI_GenBank
Match: gi|1082782023|gb|OGA99204.1| (hypothetical protein A3E25_07795 [Burkholderiales bacterium RIFCSPHIGHO2_12_FULL_69_20])

HSP 1 Score: 65.855 bits (159), Expect = 2.599e-8
Identity = 59/182 (32.42%), Postives = 90/182 (49.45%), Query Frame = 0
Query:  131 FQGYLDERWSYGDAPNGGILTSMAITAARRLSSPARPDPLSVSTYFVKKALEKTPVFLHVTPLAASRSQETLQVTLVQENEARAHFLATFGAL---ESFKGLDMNHLLPPVLPPRAHCLDLMALLHEEQPANHKIGDRIELWV-PEESAFIKGIVRGEPINSMEEPCVLEGWGAFRAERAPD 308
            F G++D  W+ G  PNGG L ++A  A R+++ PA+PDPLS+S ++++  L   P  +    L + R+  T++ TLVQ   AR   LA  G L   E+     +   +P + PP A C    A     Q     I DR+++ + P+E+A   G  R   ++         GW  F   RAPD
Sbjct:   26 FSGHVDSAWNIGANPNGGYLLALAAQALRQIT-PAQPDPLSISVHYLRPGLAGQPCRIDTQLLRSGRTLSTVRATLVQGGSARLEVLAAMGDLGAPETAAPPLLTRPMPDMPPPEA-CPGRSA---PAQGVALAILDRLDIRLHPDEAA--PGAARQARVS---------GWIRFADGRAPD 191          
BLAST of EWM22020.1 vs. NCBI_GenBank
Match: gi|1200209828|gb|OUT34264.1| (hypothetical protein CBB61_07945 [Gammaproteobacteria bacterium TMED1])

HSP 1 Score: 63.5438 bits (153), Expect = 1.391e-7
Identity = 34/113 (30.09%), Postives = 62/113 (54.87%), Query Frame = 0
Query:  131 FQGYLDERWSYGDAPNGGILTSMAITAARRLSSPARPDPLSVSTYFVKKALEKTPVFLHVTPLAASRSQETLQVTLVQENEARAHFLATFGAL--ESFKGLDMNHLLPPVLPP 241
              G++ ++W+ GD PNGG L  +A+ A  +LS   + DP++V+ +F++  +  TP  ++V  +   R+  T++ +L QE + R   +A  G L  +S     +    P +LPP
Sbjct:   18 LSGFVSKQWNIGDNPNGGYLACIALRAVAQLSKKHK-DPVTVTAHFLRPGIPDTPCEIYVESIRTGRTITTMRASLHQEGKPRVEIIAGLGDLPGKSTGLTSIKIPAPKILPP 129          
BLAST of EWM22020.1 vs. NCBI_GenBank
Match: gi|1200288116|gb|OUU10276.1| (hypothetical protein CBB94_05445 [Gammaproteobacteria bacterium TMED34])

HSP 1 Score: 62.3882 bits (150), Expect = 3.272e-7
Identity = 32/95 (33.68%), Postives = 54/95 (56.84%), Query Frame = 0
Query:  131 FQGYLDERWSYGDAPNGGILTSMAITAARRLSSPARPDPLSVSTYFVKKALEKTPVFLHVTPLAASRSQETLQVTLVQENEARAHFLATFGALES 225
            ++G+++ +WS G  PNGG L + A+ A R L+ P  PDPLSV+ ++++  L  T   +    +   R+  T   +L Q+ ++R   LA FG L +
Sbjct:   18 WRGHINGQWSIGGNPNGGYLVANAMNAIRELA-PDHPDPLSVTAHYLRPGLPDTDCDIEAQMIRRGRTLTTASASLSQDGKSRIEVLAAFGDLMT 111          
The following BLAST results are available for this feature:
BLAST of EWM22020.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102426|gb|EWM22020.1|0.000e+0100.00hypothetical protein Naga_100361g2 [Nannochloropsi... [more]
gi|553178919|ref|XP_005852622.1|5.648e-7071.35hypothetical protein NGA_0713700 [Nannochloropsis ... [more]
gi|816956650|gb|AKF06156.1|2.956e-1428.32TesB-like acyl-CoA thioesterase 3 [Sandaracinus am... [more]
gi|921303748|ref|WP_053238831.1|4.279e-1428.32thioesterase family protein [Sandaracinus amylolyt... [more]
gi|493640900|ref|WP_006592605.1|7.015e-934.00thioesterase family protein [Kineosphaera limosa] ... [more]
gi|1200322248|gb|OUU43102.1|9.239e-936.84hypothetical protein CBC10_12850 [Gammaproteobacte... [more]
gi|1026983436|ref|XP_016608145.1|2.481e-829.86hypothetical protein SPPG_04448 [Spizellomyces pun... [more]
gi|1082782023|gb|OGA99204.1|2.599e-832.42hypothetical protein A3E25_07795 [Burkholderiales ... [more]
gi|1200209828|gb|OUT34264.1|1.391e-730.09hypothetical protein CBB61_07945 [Gammaproteobacte... [more]
gi|1200288116|gb|OUU10276.1|3.272e-733.68hypothetical protein CBB94_05445 [Gammaproteobacte... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8683rna8683Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications