EWM22048.1, cds8646 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22048.1 vs. NCBI_GenBank
Match: gi|585102463|gb|EWM22048.1| (anaphase-promoting complex subunit 1 [Nannochloropsis gaditana]) HSP 1 Score: 996.497 bits (2575), Expect = 0.000e+0 Identity = 500/500 (100.00%), Postives = 500/500 (100.00%), Query Frame = 0
Query: 1 MALHMAIGFLFLGGGRAGLCRSDSAVAALVAALYPRLPAHTSDNQYSLQAMRHLYVLAVGHRGVEARDAETGESVFVPLEVKYRDGRLERRVAPCLLPELDLLSEVVTRSPRYYPLSFSVGAEGGGEEGGRENRRRTRRRGGPRMFEGPRRQICVKRKPGHLSYAQDPQALRSLLVRPFGADHRSRHTDGDAFPSSSPSELIAAFTEDPFLLAFARHFCTGDSAVGRKGMGSQVSPPPPPAPGYPLPSPSTPPSHPPSPPPPPRPSLLQRESRLCAGVLYECLTREKPDLLVLHFSLLHVLQVLPTMDPVAAACTTCNLRLVLRYFSPEARLRGRLRGKQGREERERRGDDPVCSRTGGREEEGGTEDWLLQADLVQSLRVRMDALFVSLGLGEEVMAEMGVTGHAESIESLAGVDSSSVGSKPLCGAYALYYDLPCAAASHPFAVGFPPTGPVGQGWEQQRRAAMRELPALRARAPHAALSDLLRGLGSAARWRDGQEW 500
MALHMAIGFLFLGGGRAGLCRSDSAVAALVAALYPRLPAHTSDNQYSLQAMRHLYVLAVGHRGVEARDAETGESVFVPLEVKYRDGRLERRVAPCLLPELDLLSEVVTRSPRYYPLSFSVGAEGGGEEGGRENRRRTRRRGGPRMFEGPRRQICVKRKPGHLSYAQDPQALRSLLVRPFGADHRSRHTDGDAFPSSSPSELIAAFTEDPFLLAFARHFCTGDSAVGRKGMGSQVSPPPPPAPGYPLPSPSTPPSHPPSPPPPPRPSLLQRESRLCAGVLYECLTREKPDLLVLHFSLLHVLQVLPTMDPVAAACTTCNLRLVLRYFSPEARLRGRLRGKQGREERERRGDDPVCSRTGGREEEGGTEDWLLQADLVQSLRVRMDALFVSLGLGEEVMAEMGVTGHAESIESLAGVDSSSVGSKPLCGAYALYYDLPCAAASHPFAVGFPPTGPVGQGWEQQRRAAMRELPALRARAPHAALSDLLRGLGSAARWRDGQEW
Sbjct: 1 MALHMAIGFLFLGGGRAGLCRSDSAVAALVAALYPRLPAHTSDNQYSLQAMRHLYVLAVGHRGVEARDAETGESVFVPLEVKYRDGRLERRVAPCLLPELDLLSEVVTRSPRYYPLSFSVGAEGGGEEGGRENRRRTRRRGGPRMFEGPRRQICVKRKPGHLSYAQDPQALRSLLVRPFGADHRSRHTDGDAFPSSSPSELIAAFTEDPFLLAFARHFCTGDSAVGRKGMGSQVSPPPPPAPGYPLPSPSTPPSHPPSPPPPPRPSLLQRESRLCAGVLYECLTREKPDLLVLHFSLLHVLQVLPTMDPVAAACTTCNLRLVLRYFSPEARLRGRLRGKQGREERERRGDDPVCSRTGGREEEGGTEDWLLQADLVQSLRVRMDALFVSLGLGEEVMAEMGVTGHAESIESLAGVDSSSVGSKPLCGAYALYYDLPCAAASHPFAVGFPPTGPVGQGWEQQRRAAMRELPALRARAPHAALSDLLRGLGSAARWRDGQEW 500
BLAST of EWM22048.1 vs. NCBI_GenBank
Match: gi|762159466|ref|XP_011417930.1| (PREDICTED: anaphase-promoting complex subunit 1 isoform X2 [Crassostrea gigas]) HSP 1 Score: 161.384 bits (407), Expect = 2.104e-39 Identity = 98/307 (31.92%), Postives = 148/307 (48.21%), Query Frame = 0
Query: 1 MALHMAIGFLFLGGGRAGLCRSDSAVAALVAALYPRLPAHTSDNQYSLQAMRHLYVLAVGHRGVEARDAETGESVFVPLEVKYRD-----GRLERRVAPCLLPELDLLSEVVTRSPRYYPLSFSVGAEGGGEEGGRENRRRTRRRGGPRMFEGPRRQICVKRKPGHLSYAQDPQALRSLLVRPFGADHRSRHTDGDAFPSSSPSELIAAFTEDPFLLAFARHFCTGDSAVGRKGMGSQVSPPPPPAPGYPLPSPSTPPSHPPSPPPPPRPSLLQRESRLCAGVLYECLTREKPDLLVLHFSLLHVLQ 302
MA+ M++G LFLGGGR L + A+ ++ A +P+ P H++DN+Y LQA RHLYVLA R V RD ++GE +VPLE++++D G + R AP LLPELD + EV PRY+P++F + + + ++ G + VK++ G+LSY DP+ RS+L + +DH S HT S ++I AFT DP + + A +F G R R + + +LY C+T+EKP+++ H L VL
Sbjct: 263 MAISMSVGLLFLGGGRYSLSTTPEAIGIMLCAFFPKFPFHSNDNRYHLQAFRHLYVLATEARVVLPRDVDSGEPCYVPLEIRFKDTADYCGEVFRTSAPTLLPELDKIEEVKILGPRYWPITFHI-------DKNWSTLKLLLKKNGI---------LFVKQRAGYLSYVLDPKGYRSVLAKSLTSDH-SSHT-------SVKPDVIKAFTTDPVISSMADYFLMGKDDCQR-----------------------------------------NRTLQKLSSILYSCVTQEKPEVISTHLRLDQVLN 504
BLAST of EWM22048.1 vs. NCBI_GenBank
Match: gi|676394023|ref|XP_009040289.1| (hypothetical protein AURANDRAFT_38761 [Aureococcus anophagefferens] >gi|323449043|gb|EGB04934.1| hypothetical protein AURANDRAFT_38761 [Aureococcus anophagefferens]) HSP 1 Score: 159.073 bits (401), Expect = 4.620e-38 Identity = 130/385 (33.77%), Postives = 175/385 (45.45%), Query Frame = 0
Query: 1 MALHMAIGFLFLGGGRAGLCRSDSAVAALVAALYPRLPAHTSDNQYSLQAMRHLYVLAVGHRGVEARDAETGESVFVPLEVKYR-----------DG----RLERRVAPCLLPELDLLSEVVTRSPRYYPLSFSVGAEGGGEEGGRENRRRTRRRGGPRMFEGPRRQICVKRKPGHLSYAQDPQALRSLLVRPFGADHRSRHTDGDA---FPSSSP-----------SELIAAFTEDPFLLAFARHFCTGDSAVGRKGMGSQVSPPPPPAPGYPLPSPSTPPSHPPSPPPPPRPSLLQRESRLCAGVLYECLTREKPDLLVLHFSLLHVLQVLPTMDPVAAACTTCNLRLVLRYFS-PEARLRGRLRGKQGREERERRGDDPVCS 355
MALHM+IG LFLGGGRA L RS ++AAL+ A YPR P DNQY LQ +RHL+VLAV RG++A D ETG+ VPL+V+ R DG + R +APCLLP L + + S RYYP + +N R + I VKR+PG+LSY +DP ALR L R A + G P + P S+++A++T+DP LL FAR FC P G + P PS +Q R CA +L+EC+ +KP +L+L+ L H T+ + +LR+ L ++S L L + E D VCS
Sbjct: 511 MALHMSIGLLFLGGGRASLFRSKESIAALLTAFYPRFPRSPEDNQYHLQPLRHLWVLAVDWRGIKAVDVETGKDAPVPLQVELRSLADYVTIRVADGWSTTQSIRIMAPCLLPPLSDIISIRVASERYYPAALDT-----------QNERHAAALS--------KLLIYVKRRPGYLSYMRDPYALRERL-REEEAFRDKEYGHGSVRVLAPWARPLQSCPETGLETSDILASYTDDPILLTFARQFC----------------DHFDPHTGGEMKQAQIWGGGAYGGPLGGAPSHIQ---RWCARILHECVAYDKPMVLLLYMQLHHAAL---TIHWAKHSHHAWSLRMTLEFYSRASHHLDLTLLRRDFLEALRVHADAVVCS 853
BLAST of EWM22048.1 vs. NCBI_GenBank
Match: gi|1016699428|ref|XP_016071685.1| (PREDICTED: anaphase-promoting complex subunit 1 [Miniopterus natalensis] >gi|1016699432|ref|XP_016071686.1| PREDICTED: anaphase-promoting complex subunit 1 [Miniopterus natalensis]) HSP 1 Score: 157.918 bits (398), Expect = 1.938e-37 Identity = 107/332 (32.23%), Postives = 162/332 (48.80%), Query Frame = 0
Query: 1 MALHMAIGFLFLGGGRAGLCRSDSAVAALVAALYPRLPAHTSDNQYSLQAMRHLYVLAVGHRGVEARDAETGESVFVPLEVKYRDGRL-----ERRVAPCLLPELDLLSEVVTRSPRYYPLSFSVGAEGGGEEGGRENRRRTRRRGGPRMFEGPRRQICVKRKPGHLSYAQDPQALRSLLVRPFGADHRSRHTDGDAFPSSSPSELIAAFTEDPFLLAFARHFCTGDSAVGRKGMGSQVSPPPPPAPGYPLPSPSTPPSHPPSPPPPPRPSLLQRESRLCAGVLYECLTREKPDLLVLHFSLLHVLQVLPTMDPVAAACTTCNLRLVLRYFS 327
+A HMA+G LFLGGGR L S+S++AAL+ ALYP PAH++DN+Y LQA+RHLYVLA R + D +T + LEV Y+ + E +AP LLPEL LL ++ + PRY+ L + G ++ + + G + VK + G LSY +DP +SLL + +R+++ AF E I+AFT DP LL+FA +FC +G+K Q L + VLYEC+T+E P++L + ++ ++ L + ++ ++LVL +FS
Sbjct: 1555 LAHHMALGILFLGGGRYSLSTSNSSIAALLCALYPHFPAHSTDNRYHLQALRHLYVLAAEPRLLVPVDVDTNTPCYALLEVTYKGTQWYEQTKEELMAPTLLPELHLLKQIKVKGPRYWELLIDLSK-------GTQHLKSILSKDGV---------LYVKLRAGQLSYKEDPMGWQSLLAQTVA----NRNSEARAF----KPETISAFTSDPALLSFAEYFCKPTVNMGQK----------------------------------------QEILDLFSSVLYECVTQETPEMLPAYIAMDQAVRRLGRRE-MSETSELWQIKLVLEFFS 1821
BLAST of EWM22048.1 vs. NCBI_GenBank
Match: gi|857975716|emb|CEO98220.1| (hypothetical protein PBRA_006333 [Plasmodiophora brassicae]) HSP 1 Score: 152.14 bits (383), Expect = 1.649e-35 Identity = 104/305 (34.10%), Postives = 140/305 (45.90%), Query Frame = 0
Query: 1 MALHMAIGFLFLGGGRAGLCRSDSAVAALVAALYPRLPAHTSDNQYSLQAMRHLYVLAVGHRGVEARDAETGESVFVPLEVKYRDGRLERRVAPCLLPELDLLSEVVTRSPRYYPLSFSVGAEGGGEEGGRENRRRTRRRGGPRMFEGPRRQICVKRKPGHLSYAQDPQALRSLLVRPF-GADHRSRHTDGDAFPSSSPSELIAAFTEDPFLLAFARHFCTGDSAVGRKGMGSQVSPPPPPAPGYPLPSPSTPPSHPPSPPPPPRPSLLQRESRLCAGVLYECLTREKPDLLVLHFSLLHVLQVL 304
MALHM+IG LFLGGGR+ L S A+AALV AL+PR P T+DN+ +QA RHLYVLAV R +E RD + G +VPL V+ G +APCLLP D + + SPR++PL + +G ++ + G MF VKRK GHL Y QDP R +L R F H S + + +F D L+ FA+ FC G P ST VL+ECLTR+ PD++ +F++ ++ L
Sbjct: 1194 MALHMSIGLLFLGGGRSSLSTSSPAIAALVIALFPRFPMSTTDNRDHVQAFRHLYVLAVEPRYLETRDVDNGRPCYVPLVVQLSHGEQRNIIAPCLLPSPDTVESIRVESPRFWPLVLDL-------KGSDAHKSLIVQNG--VMF--------VKRKTGHLPYRQDPLGRRGILSRSFPRLTHLSSGKQSQRRAAVHREAFVESFAADSVLVEFAKDFC---------------------GEGTPSGEFST-------------------------AVLFECLTRDTPDMIPTYFAVYEIVNDL 1435
BLAST of EWM22048.1 vs. NCBI_GenBank
Match: gi|1207918571|ref|XP_021348141.1| (anaphase-promoting complex subunit 1-like [Mizuhopecten yessoensis]) HSP 1 Score: 149.443 bits (376), Expect = 3.960e-35 Identity = 111/352 (31.53%), Postives = 167/352 (47.44%), Query Frame = 0
Query: 1 MALHMAIGFLFLGGGRAGLCRSDSAVAALVAALYPRLPAHTSDNQYSLQAMRHLYVLAVGHRGVEARDAETGESVFVPLEVKYRDGRLERRV-----APCLLPELDLLSEVVTRSPRYYPLSFSVGAEGGGEEGGRENRRRTRRRGGPRMFEGPRRQICVKRKPGHLSYAQDPQALRSLLVRPFGADHRSRHTDGDAFPSSSPSELIAAFTEDPFLLAFARHFCTGDSAVGRKGMGSQVSPPPPPAPGYPLPSPSTPPSHPPSPPPPPRPSLLQRESRLCAGVLYECLTREKPDLLVLHFSLLHVLQVLPTMDPVAAACTTCNLRLVLRYFSPEARLRGRLRGKQGREERER 347
MA+ M++G LFLGGGR L + +A ++ A YP+ P H++DN+Y LQA+RHLYV+A R V RD +TG +VP+EVK++D + + APCLLPELD++ EV PRY+P++F + N + + G + VK++ GHLSY +DP+ RS+L + +DH S SS +++ AFT DP LLA +F + K M LQ + + ++YEC+T+EKP+ + S + + Q L C L+LVL Y+ R L K+G + E+
Sbjct: 275 MAISMSLGLLFLGGGRYSLKTTSDCIAVMLCAFYPKFPIHSNDNRYHLQALRHLYVMAADPRLVLPRDVDTGHPCYVPMEVKFKDTDVYSNISFSTSAPCLLPELDVIEEVKITGPRYWPIAFHLNKNWN-------NLQLVLQNNGT---------LYVKQRAGHLSYVEDPKGYRSMLAKSLTSDHSSH--------SSVKPDVVKAFTSDPRLLALTEYF------LNTKNMKD--------------------------------VDFLQ----ILSSIVYECVTKEKPESIP---SYVDLHQSLERGQFGMRTEGVCQLKLVLSYYGS----RFCLVDKEGTKSSEQ 553
BLAST of EWM22048.1 vs. NCBI_GenBank
Match: gi|632952941|ref|XP_007892129.1| (PREDICTED: anaphase-promoting complex subunit 1 isoform X2 [Callorhinchus milii]) HSP 1 Score: 145.206 bits (365), Expect = 3.676e-33 Identity = 105/299 (35.12%), Postives = 147/299 (49.16%), Query Frame = 0
Query: 1 MALHMAIGFLFLGGGRAGLCRSDSAVAALVAALYPRLPAHTSDNQYSLQAMRHLYVLAVGHRGVEARDAETGESVFVPLEVKYRDGRL-----ERRVAPCLLPELDLLSEVVTRSPRYYPLSFSVGAEGGGEEGGRENRRRTRRRGGPRMFEGPRRQ---ICVKRKPGHLSYAQDPQALRSLLVRPFGADHRSRHTDGDAFPSSSPSELIAAFTEDPFLLAFARHFCTGDSAVGRKGMGSQVSPPPPPAPGYPLPSPSTPPSHPPSPPPPPRPSLLQRESRLCAGVLYECLTREKPDLL 291
MA HMA+G LFLGGGR LC S+SA+AAL+ ALYPR PAH+SDN+Y LQA+RHLYVLA R + D +T + + V Y+ + +AP LLPEL LL E+ + P+Y+ + + GP+ + + + VK + GHLSY +DP+ RSLL + F HR+ F S P E ++AFT DP LL+FA +FC + G+K + L + +LYEC+T+EKP++L
Sbjct: 1605 MATHMALGLLFLGGGRYSLCTSNSAIAALLCALYPRFPAHSSDNRYHLQALRHLYVLATEPRLLVPIDVDTNTPCYALINVAYKASQWCEEMTVNLMAPTLLPELHLLKEIKVKGPKYWEIMMDLSK-------------------GPQSLQAILSKDGFLYVKLRAGHLSYTEDPKGFRSLLAQTFT--HRN-----PEFLSVKP-EAVSAFTSDPALLSFAEYFCKQSNENGQK----------------------------------------KEMLDLFSSILYECVTQEKPEML 1836
BLAST of EWM22048.1 vs. NCBI_GenBank
Match: gi|632952939|ref|XP_007892127.1| (PREDICTED: anaphase-promoting complex subunit 1 isoform X1 [Callorhinchus milii]) HSP 1 Score: 145.206 bits (365), Expect = 3.676e-33 Identity = 105/299 (35.12%), Postives = 147/299 (49.16%), Query Frame = 0
Query: 1 MALHMAIGFLFLGGGRAGLCRSDSAVAALVAALYPRLPAHTSDNQYSLQAMRHLYVLAVGHRGVEARDAETGESVFVPLEVKYRDGRL-----ERRVAPCLLPELDLLSEVVTRSPRYYPLSFSVGAEGGGEEGGRENRRRTRRRGGPRMFEGPRRQ---ICVKRKPGHLSYAQDPQALRSLLVRPFGADHRSRHTDGDAFPSSSPSELIAAFTEDPFLLAFARHFCTGDSAVGRKGMGSQVSPPPPPAPGYPLPSPSTPPSHPPSPPPPPRPSLLQRESRLCAGVLYECLTREKPDLL 291
MA HMA+G LFLGGGR LC S+SA+AAL+ ALYPR PAH+SDN+Y LQA+RHLYVLA R + D +T + + V Y+ + +AP LLPEL LL E+ + P+Y+ + + GP+ + + + VK + GHLSY +DP+ RSLL + F HR+ F S P E ++AFT DP LL+FA +FC + G+K + L + +LYEC+T+EKP++L
Sbjct: 1606 MATHMALGLLFLGGGRYSLCTSNSAIAALLCALYPRFPAHSSDNRYHLQALRHLYVLATEPRLLVPIDVDTNTPCYALINVAYKASQWCEEMTVNLMAPTLLPELHLLKEIKVKGPKYWEIMMDLSK-------------------GPQSLQAILSKDGFLYVKLRAGHLSYTEDPKGFRSLLAQTFT--HRN-----PEFLSVKP-EAVSAFTSDPALLSFAEYFCKQSNENGQK----------------------------------------KEMLDLFSSILYECVTQEKPEML 1837
BLAST of EWM22048.1 vs. NCBI_GenBank
Match: gi|1160117214|ref|XP_020384856.1| (anaphase-promoting complex subunit 1-like [Rhincodon typus]) HSP 1 Score: 143.28 bits (360), Expect = 5.107e-33 Identity = 107/332 (32.23%), Postives = 164/332 (49.40%), Query Frame = 0
Query: 1 MALHMAIGFLFLGGGRAGLCRSDSAVAALVAALYPRLPAHTSDNQYSLQAMRHLYVLAVGHRGVEARDAETGESVFVPLEVKYRDGRL-----ERRVAPCLLPELDLLSEVVTRSPRYYPLSFSVGAEGGGEEGGRENRRRTRRRGGPRMFEGPRRQICVKRKPGHLSYAQDPQALRSLLVRPFGADHRSRHTDGDAFPSSSPSELIAAFTEDPFLLAFARHFCTGDSAVGRKGMGSQVSPPPPPAPGYPLPSPSTPPSHPPSPPPPPRPSLLQRESRLCAGVLYECLTREKPDLLVLHFSLLHVLQVLPTMDPVAAACTTCNLRLVLRYFS 327
MA HMA+G LFLGGGR LC S+SA+AAL+ ALYPR PAH++DN+Y LQA+RHLYVLA R + D +T + ++V Y+ + +AP LLPEL LL E+ + P+Y+ + + G + + + G + VK + GHLSY +DP+ RSLL + F HR+ F S P E ++AFT DP LL+FA +FC G++ + L + +LYEC+T+EKP++L + ++ ++ L + + C ++LV ++++
Sbjct: 272 MASHMALGLLFLGGGRYSLCTSNSAIAALLCALYPRFPAHSTDNRYHLQALRHLYVLAAEPRLLVPVDVDTNTPCYALIKVTYKASQWCEEMTVNLMAPSLLPELHLLKEIKVKGPKYWEIMMDLSK-------GLTSLQSILSKDGF---------LYVKLRAGHLSYTEDPKGFRSLLAQTF--THRN-----PEFLSIKP-EAVSAFTSDPALLSFAEYFCKQSKKEGKQDILD-----------------------------------------LLSSILYECVTQEKPEMLPTYMAIDQAVRRLERKE-MTETFELCQIKLVQQFYN 537
BLAST of EWM22048.1 vs. NCBI_GenBank
Match: gi|512964286|ref|XP_004844373.1| (anaphase-promoting complex subunit 1 isoform X1 [Heterocephalus glaber] >gi|1196722215|ref|XP_021113628.1| anaphase-promoting complex subunit 1 isoform X1 [Heterocephalus glaber] >gi|351708780|gb|EHB11699.1| Anaphase-promoting complex subunit 1 [Heterocephalus glaber]) HSP 1 Score: 142.124 bits (357), Expect = 3.378e-32 Identity = 108/332 (32.53%), Postives = 164/332 (49.40%), Query Frame = 0
Query: 1 MALHMAIGFLFLGGGRAGLCRSDSAVAALVAALYPRLPAHTSDNQYSLQAMRHLYVLAVGHRGVEARDAETGESVFVPLEVKYRDGRL-----ERRVAPCLLPELDLLSEVVTRSPRYYPLSFSVGAEGGGEEGGRENRRRTRRRGGPRMFEGPRRQICVKRKPGHLSYAQDPQALRSLLVRPFGADHRSRHTDGDAFPSSSPSELIAAFTEDPFLLAFARHFCTGDSAVGRKGMGSQVSPPPPPAPGYPLPSPSTPPSHPPSPPPPPRPSLLQRESRLCAGVLYECLTREKPDLLVLHFSLLHVLQVLPTMDPVAAACTTCNLRLVLRYFS 327
+A HMA+G LFLGGGR L S+S++AAL+ ALYP PAH++DN+Y LQA+RHLYVLA R + D +T + LEV Y+ + E +AP LLPEL LL ++ + PRY+ L + G ++ + + G + VK + G LSY +DP +SLL + +R+++ AF E I+AFT DP LL+FA +FC ++G+K Q L + VLYEC+T+E P++L + ++ ++ L + ++ C ++LVL +FS
Sbjct: 1554 LAHHMALGLLFLGGGRYSLSTSNSSIAALLCALYPHFPAHSTDNRYHLQALRHLYVLAAEPRLLVPVDVDTNTPCYALLEVTYKGTQWYEQTKEELMAPTLLPELHLLKQIKVKGPRYWELLIDLSK-------GTQHLKSILSKDGV---------LYVKLRAGQLSYKEDPMGWQSLLAQTVA----NRNSEARAF----KPETISAFTSDPALLSFAEYFCKPTVSMGQK----------------------------------------QEILDLFSSVLYECVTQETPEMLPAYIAMDQAIRRLGRRE-LSETCELWQIKLVLEFFS 1820 The following BLAST results are available for this feature:
BLAST of EWM22048.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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