EWM22035.1, cds8645 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22035.1 vs. NCBI_GenBank
Match: gi|585102450|gb|EWM22035.1| (ribosomal protein l32 [Nannochloropsis gaditana]) HSP 1 Score: 278.1 bits (710), Expect = 1.027e-94 Identity = 137/137 (100.00%), Postives = 137/137 (100.00%), Query Frame = 0 Query: 1 MAKVTPLVKPKSIVKKRTKKFGRFQADRFMRIARTSWRKPKGIDGRARRRFKGSTLMPNIGYGSDAKTRNLLPNGFYKFVVNNPKEVELLLLHNRKYSAEIAHNVSSRKRKAIVEKAEQLGVKVTNAAAKLRAEEDA 137 MAKVTPLVKPKSIVKKRTKKFGRFQADRFMRIARTSWRKPKGIDGRARRRFKGSTLMPNIGYGSDAKTRNLLPNGFYKFVVNNPKEVELLLLHNRKYSAEIAHNVSSRKRKAIVEKAEQLGVKVTNAAAKLRAEEDA Sbjct: 1 MAKVTPLVKPKSIVKKRTKKFGRFQADRFMRIARTSWRKPKGIDGRARRRFKGSTLMPNIGYGSDAKTRNLLPNGFYKFVVNNPKEVELLLLHNRKYSAEIAHNVSSRKRKAIVEKAEQLGVKVTNAAAKLRAEEDA 137
BLAST of EWM22035.1 vs. NCBI_GenBank
Match: gi|299473613|emb|CBN78007.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 207.608 bits (527), Expect = 8.759e-67 Identity = 101/137 (73.72%), Postives = 115/137 (83.94%), Query Frame = 0 Query: 1 MAKVTPLVKPKSIVKKRTKKFGRFQADRFMRIARTSWRKPKGIDGRARRRFKGSTLMPNIGYGSDAKTRNLLPNGFYKFVVNNPKEVELLLLHNRKYSAEIAHNVSSRKRKAIVEKAEQLGVKVTNAAAKLRAEEDA 137 M V PL K ++VKKRTKKF R Q DRFMRI +SWRKPKGIDGR RRRFKG MPN+GYGSD +TRN+LPNGFYKF+V+N KE+ELLL+HNRKY+AEIAHNVSSRKRK IVE+A QL ++VTNA AKL AEEDA Sbjct: 1 MGGVQPLNKV-NVVKKRTKKFARHQTDRFMRIKNSSWRKPKGIDGRVRRRFKGCLPMPNVGYGSDKRTRNILPNGFYKFLVHNVKELELLLMHNRKYAAEIAHNVSSRKRKEIVERAGQLHIRVTNAGAKLSAEEDA 136
BLAST of EWM22035.1 vs. NCBI_GenBank
Match: gi|1072235647|gb|OEU20376.1| (ribosomal protein L32e [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 195.667 bits (496), Expect = 4.239e-62 Identity = 94/137 (68.61%), Postives = 113/137 (82.48%), Query Frame = 0 Query: 1 MAKVTPLVKPKSIVKKRTKKFGRFQADRFMRIARTSWRKPKGIDGRARRRFKGSTLMPNIGYGSDAKTRNLLPNGFYKFVVNNPKEVELLLLHNRKYSAEIAHNVSSRKRKAIVEKAEQLGVKVTNAAAKLRAEEDA 137 MA TP+ K K+IVKKRTKKF R Q+D+FMRI +SWRKPKGIDGR RRRFKG+ MP+IGYGSD TRN+ PNGF VVNN E+E+L++HNR Y+A +AH+VSSR RK IV++AEQL ++VTNAAAKLRAEEDA Sbjct: 1 MAGPTPINK-KTIVKKRTKKFARHQSDQFMRIRDSSWRKPKGIDGRVRRRFKGAVPMPSIGYGSDKATRNICPNGFKSVVVNNVSELEMLMMHNRTYAATVAHSVSSRIRKEIVQRAEQLAIRVTNAAAKLRAEEDA 136
BLAST of EWM22035.1 vs. NCBI_GenBank
Match: gi|219122924|ref|XP_002181786.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217407062|gb|EEC47000.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 192.2 bits (487), Expect = 1.111e-60 Identity = 93/137 (67.88%), Postives = 113/137 (82.48%), Query Frame = 0 Query: 1 MAKVTPLVKPKSIVKKRTKKFGRFQADRFMRIARTSWRKPKGIDGRARRRFKGSTLMPNIGYGSDAKTRNLLPNGFYKFVVNNPKEVELLLLHNRKYSAEIAHNVSSRKRKAIVEKAEQLGVKVTNAAAKLRAEEDA 137 MA TPL K K+IVKKRTKKF R Q+D F+RIA +SWRKPKGIDGR RRRFKGS MP+IGYGSD +TRN+ P+GF V+NN E+E+L++HNR Y+A +AH+VSSR R+ IVE+AEQL ++VTNA AKLRAEEDA Sbjct: 1 MAGPTPLNK-KTIVKKRTKKFARHQSDLFLRIANSSWRKPKGIDGRVRRRFKGSIPMPSIGYGSDKQTRNVHPHGFKTVVINNVSELEMLMMHNRTYAATVAHSVSSRIRREIVERAEQLAIRVTNANAKLRAEEDA 136
BLAST of EWM22035.1 vs. NCBI_GenBank
Match: gi|676379793|ref|XP_009033175.1| (hypothetical protein AURANDRAFT_36203 [Aureococcus anophagefferens] >gi|323456214|gb|EGB12081.1| hypothetical protein AURANDRAFT_36203 [Aureococcus anophagefferens]) HSP 1 Score: 191.815 bits (486), Expect = 1.240e-60 Identity = 92/135 (68.15%), Postives = 113/135 (83.70%), Query Frame = 0 Query: 1 MAKVTPLVKPKSIVKKRTKKFGRFQADRFMRIARTSWRKPKGIDGRARRRFKGSTLMPNIGYGSDAKTRNLLPNGFYKFVVNNPKEVELLLLHNRKYSAEIAHNVSSRKRKAIVEKAEQLGVKVTNAAAKLRAEE 135 M KVT + KP +IVKKRTKKF R ++RFM+I +SWRK GID R RRRFKG+ MP IGYGSD KTR+++P+GFYKFVVNN KE+ELL++HNR Y+AEIAH+VS +KRKAI+E+AEQL +KVTNA A+LRAEE Sbjct: 1 MVKVTAMSKP-TIVKKRTKKFARHFSNRFMKIRNSSWRKIHGIDSRVRRRFKGTIPMPKIGYGSDKKTRHMMPSGFYKFVVNNVKELELLMMHNRTYAAEIAHSVSGQKRKAIIERAEQLNIKVTNANARLRAEE 134
BLAST of EWM22035.1 vs. NCBI_GenBank
Match: gi|301105188|ref|XP_002901678.1| (60S ribosomal protein L32-1 [Phytophthora infestans T30-4] >gi|262100682|gb|EEY58734.1| 60S ribosomal protein L32-1 [Phytophthora infestans T30-4]) HSP 1 Score: 188.348 bits (477), Expect = 3.208e-59 Identity = 91/136 (66.91%), Postives = 113/136 (83.09%), Query Frame = 0 Query: 1 MAKVTPLVKPKSIVKKRTKKFGRFQADRFMRIARTSWRKPKGIDGRARRRFKGSTLMPNIGYGSDAKTRNLLPNGFYKFVVNNPKEVELLLLHNRKYSAEIAHNVSSRKRKAIVEKAEQLGVKVTNAAAKLRAEED 136 M +VTP+V+PK IVKK+ KF R Q++RF R+ SWR+PKGIDGR RR+FKG+ MPNIGYGS+ KTR+LLPNGF KFVVNN E+E+LL+HNRKY AEIAHNVS RKR+ I+E+AEQL V+VTN A++RAEE+ Sbjct: 1 MVQVTPVVRPK-IVKKKVTKFKRHQSNRFKRVP-ESWRRPKGIDGRVRRKFKGAIKMPNIGYGSNKKTRHLLPNGFLKFVVNNVAELEVLLMHNRKYCAEIAHNVSGRKRREIIERAEQLNVRVTNPNARVRAEEN 134
BLAST of EWM22035.1 vs. NCBI_GenBank
Match: gi|675209169|ref|XP_008913469.1| (hypothetical protein PPTG_17566 [Phytophthora parasitica INRA-310] >gi|566011926|gb|ETI34837.1| hypothetical protein F443_18736 [Phytophthora parasitica P1569] >gi|567949390|gb|ETK75122.1| hypothetical protein L915_18218 [Phytophthora parasitica] >gi|567978054|gb|ETL28548.1| hypothetical protein L916_18122 [Phytophthora parasitica] >gi|568007565|gb|ETL81802.1| hypothetical protein L917_17936 [Phytophthora parasitica] >gi|568037425|gb|ETM35010.1| hypothetical protein L914_18022 [Phytophthora parasitica] >gi|568086250|gb|ETN01142.1| hypothetical protein PPTG_17566 [Phytophthora parasitica INRA-310] >gi|570315632|gb|ETO63580.1| hypothetical protein F444_18734 [Phytophthora parasitica P1976] >gi|570939420|gb|ETP04677.1| hypothetical protein F441_18595 [Phytophthora parasitica CJ01A1] >gi|570969706|gb|ETP32825.1| hypothetical protein F442_18549 [Phytophthora parasitica P10297] >gi|970654552|gb|KUF92850.1| hypothetical protein AM588_10005267 [Phytophthora nicotianae] >gi|1214694159|gb|OWZ08282.1| 60S ribosomal protein L32-1 [Phytophthora megakarya]) HSP 1 Score: 188.348 bits (477), Expect = 3.747e-59 Identity = 91/136 (66.91%), Postives = 113/136 (83.09%), Query Frame = 0 Query: 1 MAKVTPLVKPKSIVKKRTKKFGRFQADRFMRIARTSWRKPKGIDGRARRRFKGSTLMPNIGYGSDAKTRNLLPNGFYKFVVNNPKEVELLLLHNRKYSAEIAHNVSSRKRKAIVEKAEQLGVKVTNAAAKLRAEED 136 M +VTP+V+PK IVKK+ KF R Q++RF R+ SWR+PKGIDGR RR+FKG+ MPNIGYGS+ KTR+LLPNGF KFVVNN E+E+LL+HNRKY AEIAHNVS RKR+ I+E+AEQL V+VTN A++RAEE+ Sbjct: 1 MVQVTPVVRPK-IVKKKVTKFKRHQSNRFKRVP-ESWRRPKGIDGRVRRKFKGAIKMPNIGYGSNKKTRHLLPNGFLKFVVNNVAELEVLLMHNRKYCAEIAHNVSGRKRREIIERAEQLNVRVTNPNARVRAEEN 134
BLAST of EWM22035.1 vs. NCBI_GenBank
Match: gi|693500244|emb|CEF97489.1| (Ribosomal protein L32e [Ostreococcus tauri] >gi|1199294248|gb|OUS49329.1| ribosomal protein L32e [Ostreococcus tauri]) HSP 1 Score: 187.578 bits (475), Expect = 6.207e-59 Identity = 91/133 (68.42%), Postives = 111/133 (83.46%), Query Frame = 0 Query: 4 VTPLVKPKSIVKKRTKKFGRFQADRFMRIARTSWRKPKGIDGRARRRFKGSTLMPNIGYGSDAKTRNLLPNGFYKFVVNNPKEVELLLLHNRKYSAEIAHNVSSRKRKAIVEKAEQLGVKVTNAAAKLRAEED 136 VTPL+K K IVKKR F ++Q+DR+ RIA TSWR+PKGID R RR+FKG MPNIGYG+ KTR+LLPNGF KF V+N K+++LLL+HNRKY AEIAHNVS+ RKAIVE+A+QL VKV+NAAA+LR+EED Sbjct: 2 VTPLIKHK-IVKKRKATFKKYQSDRYKRIANTSWRRPKGIDSRERRKFKGLPPMPNIGYGTAKKTRHLLPNGFLKFTVHNVKDLDLLLMHNRKYCAEIAHNVSTLHRKAIVERAKQLNVKVSNAAARLRSEED 133
BLAST of EWM22035.1 vs. NCBI_GenBank
Match: gi|695379962|ref|XP_009516675.1| (hypothetical protein PHYSODRAFT_353635 [Phytophthora sojae] >gi|348689586|gb|EGZ29400.1| hypothetical protein PHYSODRAFT_353635 [Phytophthora sojae]) HSP 1 Score: 187.193 bits (474), Expect = 1.038e-58 Identity = 89/136 (65.44%), Postives = 113/136 (83.09%), Query Frame = 0 Query: 1 MAKVTPLVKPKSIVKKRTKKFGRFQADRFMRIARTSWRKPKGIDGRARRRFKGSTLMPNIGYGSDAKTRNLLPNGFYKFVVNNPKEVELLLLHNRKYSAEIAHNVSSRKRKAIVEKAEQLGVKVTNAAAKLRAEED 136 M +VTP+++PK IVKK+ KF R Q++RF R+ SWR+PKGIDGR RR+FKG+ MPN+GYGS+ KTR+LLPNGF KFVVNN E+E+LL+HNRKY AEIAHNVS RKR+ I+E+AEQL V+VTN A++RAEE+ Sbjct: 1 MVQVTPVIRPK-IVKKKVTKFKRHQSNRFKRVP-ESWRRPKGIDGRVRRKFKGAIKMPNVGYGSNKKTRHLLPNGFLKFVVNNVAELEVLLMHNRKYCAEIAHNVSGRKRREIIERAEQLNVRVTNPNARVRAEEN 134
BLAST of EWM22035.1 vs. NCBI_GenBank
Match: gi|168027728|ref|XP_001766381.1| (predicted protein [Physcomitrella patens] >gi|162682290|gb|EDQ68709.1| predicted protein [Physcomitrella patens]) HSP 1 Score: 186.037 bits (471), Expect = 2.639e-58 Identity = 88/133 (66.17%), Postives = 114/133 (85.71%), Query Frame = 0 Query: 4 VTPLVKPKSIVKKRTKKFGRFQADRFMRIARTSWRKPKGIDGRARRRFKGSTLMPNIGYGSDAKTRNLLPNGFYKFVVNNPKEVELLLLHNRKYSAEIAHNVSSRKRKAIVEKAEQLGVKVTNAAAKLRAEED 136 VTPLVK + ++KKR KKF R Q+DR + +T+WR+PKGID R RR+FKG+TLMPNIGYGS+ KTR++LP+GF KF+V+N K+VELLL+HNRKYSAEIAHNVS+ KRKAIVE+A QL + +TN +A+LR++ED Sbjct: 2 VTPLVK-RDVIKKRVKKFKRMQSDRKI-CVKTNWRRPKGIDSRVRRKFKGTTLMPNIGYGSNKKTRHVLPSGFVKFLVHNVKDVELLLMHNRKYSAEIAHNVSTLKRKAIVERAAQLNIALTNGSARLRSQED 132 The following BLAST results are available for this feature:
BLAST of EWM22035.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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