EWM22062.1, cds8642 (CDS) Nannochloropsis gaditana

Overview
NameEWM22062.1
Unique Namecds8642
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:552592..553080 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22062.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100052g34.1187.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:552592..553080 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
[Close]
BLAST of EWM22062.1 vs. NCBI_GenBank
Match: gi|585102477|gb|EWM22062.1| (hypothetical protein Naga_100052g34 [Nannochloropsis gaditana])

HSP 1 Score: 333.183 bits (853), Expect = 1.024e-115
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0 
Query:    1 MYGASLCYARGMTWRTINTIAPQQTTKAGTLSVPRRRLDTALYAYRLFSEARYNSPRPDTATPQSTLRHATLSLLNEAEGKPLHNRDIYKGLQDSLPAESHLKERLTLTYLKTKILRHLREKKYIRSVAVWTEGKKRASYGYVVSRLPKDFKESKSEMKDEE 162
            MYGASLCYARGMTWRTINTIAPQQTTKAGTLSVPRRRLDTALYAYRLFSEARYNSPRPDTATPQSTLRHATLSLLNEAEGKPLHNRDIYKGLQDSLPAESHLKERLTLTYLKTKILRHLREKKYIRSVAVWTEGKKRASYGYVVSRLPKDFKESKSEMKDEE
Sbjct:    1 MYGASLCYARGMTWRTINTIAPQQTTKAGTLSVPRRRLDTALYAYRLFSEARYNSPRPDTATPQSTLRHATLSLLNEAEGKPLHNRDIYKGLQDSLPAESHLKERLTLTYLKTKILRHLREKKYIRSVAVWTEGKKRASYGYVVSRLPKDFKESKSEMKDEE 162
The following BLAST results are available for this feature:
BLAST of EWM22062.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585102477|gb|EWM22062.1|1.024e-115100.00hypothetical protein Naga_100052g34 [Nannochlorops... [more]
back to top
Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8669rna8669Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications