EWM22054.1, cds8633 (CDS) Nannochloropsis gaditana

Overview
NameEWM22054.1
Unique Namecds8633
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:529479..529784 -
Alignment locationKK037249.1:528789..529316 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22054.1
ProductBiotin/lipoate A/B protein ligase
Orig transcript idgnl|cribi|Naga_100052g24.1179.mrna
GeneBPL_LplA_LipB
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:529479..529784 -
KK037249.1supercontigKK037249.1:528789..529316 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
Vocabulary: INTERPRO
TermDefinition
IPR004143BPL_LPL_catalytic
Homology
BLAST of EWM22054.1 vs. NCBI_GenBank
Match: gi|585102469|gb|EWM22054.1| (Biotin/lipoate A/B protein ligase [Nannochloropsis gaditana])

HSP 1 Score: 570.466 bits (1469), Expect = 0.000e+0
Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 0
Query:    1 MSTRPALHLLRLRNAVGIKDQLWLEEALLRHDTRNWCLLKDGEPAGGTGRPTIVLGIGGKPSKLVHLDRVIQDEIPVLRRFSGGGTVIVDQDSLFVTFIMNTVEVTPNQPYPRPIMEWTAGLYRPVFERLRSAQTKPFELRENDYVFGSLKFGGNAQSIVKDRWLHHTSFLWDFQRSNMEYLTLPERRPEYRQDRSHSSFLTSLKDHTPQGDRLALFRELELELGSHFRVQAASEPDVRSDVVERRLGGMEAWGKKARTRQVSPAEELSKLDNHSRC 277
            MSTRPALHLLRLRNAVGIKDQLWLEEALLRHDTRNWCLLKDGEPAGGTGRPTIVLGIGGKPSKLVHLDRVIQDEIPVLRRFSGGGTVIVDQDSLFVTFIMNTVEVTPNQPYPRPIMEWTAGLYRPVFERLRSAQTKPFELRENDYVFGSLKFGGNAQSIVKDRWLHHTSFLWDFQRSNMEYLTLPERRPEYRQDRSHSSFLTSLKDHTPQGDRLALFRELELELGSHFRVQAASEPDVRSDVVERRLGGMEAWGKKARTRQVSPAEELSKLDNHSRC
Sbjct:    1 MSTRPALHLLRLRNAVGIKDQLWLEEALLRHDTRNWCLLKDGEPAGGTGRPTIVLGIGGKPSKLVHLDRVIQDEIPVLRRFSGGGTVIVDQDSLFVTFIMNTVEVTPNQPYPRPIMEWTAGLYRPVFERLRSAQTKPFELRENDYVFGSLKFGGNAQSIVKDRWLHHTSFLWDFQRSNMEYLTLPERRPEYRQDRSHSSFLTSLKDHTPQGDRLALFRELELELGSHFRVQAASEPDVRSDVVERRLGGMEAWGKKARTRQVSPAEELSKLDNHSRC 277          
BLAST of EWM22054.1 vs. NCBI_GenBank
Match: gi|299471008|emb|CBN78869.1| (Biotin/lipoate A/B protein ligase family [Ectocarpus siliculosus])

HSP 1 Score: 241.121 bits (614), Expect = 8.373e-76
Identity = 125/239 (52.30%), Postives = 160/239 (66.95%), Query Frame = 0
Query:    6 ALHLLRLRNAVGIKDQLWLEEALLRHDTRNWCLLKDGEPAGGTGRPTIVLGIGGKPSKLVHLDRVIQDEIPVLRRFSGGGTVIVDQDSLFVTFIMNTVEVTPNQPYPRPIMEWTAGLYRPVFERLRSAQTKP---FELRENDYVFGSLKFGGNAQSIVKDRWLHHTSFLWDFQRSNMEYLTLPERRPEYRQDRSHSSFLTSLKDHTPQGDRLALFRELELELGSHFRVQAASEPDVRSD 241
             L +LRL+  V I  QL +EE L    T NW +L +G P      PT+VLGI GKP K+ +L+ V +D+IP+++RFSGGGTVIVD  ++F + I+N  +V   +PYPR IM+W+ G+Y P F   RSA TKP     LRENDYVFG LKFGGNAQ+I K RWLHHTSFLWDF  +NM YL +PE+RP+YR DR H +FLT LKDH   G R  L+  +++  G HF ++  S  DV  D
Sbjct:    4 VLRVLRLKR-VPIFQQLCIEEVLFYKTTSNWLVLNEGHP---QAHPTVVLGISGKPEKMCNLELVERDKIPLIKRFSGGGTVIVDGSTIFASLIVNQADVPECKPYPREIMDWSKGIYGPAF---RSAVTKPELELGLRENDYVFGDLKFGGNAQAITKGRWLHHTSFLWDFDPTNMLYLQMPEKRPQYRGDRDHKAFLTPLKDHV--GRREDLWAAVKVAAGEHFVLEEVSISDVLRD 233          
BLAST of EWM22054.1 vs. NCBI_GenBank
Match: gi|1147555624|ref|XP_020104512.1| (putative lipoate-protein ligase A [Ananas comosus] >gi|1147555626|ref|XP_020104521.1| putative lipoate-protein ligase A [Ananas comosus])

HSP 1 Score: 240.35 bits (612), Expect = 1.466e-75
Identity = 121/229 (52.84%), Postives = 155/229 (67.69%), Query Frame = 0
Query:    4 RPALHLLRLRNAVGIKDQLWLEEALLRHDTRNWCLLKDGEPAGGTGRPTIVLGIGGKPSKLVHLDRVIQDEIPVLRRFSGGGTVIVDQDSLFVTFIMNTVEVTPNQPYPRPIMEWTAGLYRPVFERLRSAQTKPFELRENDYVFGSLKFGGNAQSIVKDRWLHHTSFLWDFQRSNMEYLTLPERRPEYRQDRSHSSFLTSLKDHTPQGDRLALFRELELE-LGSHFRVQ 231
            RP ++L++L+    I  QL+LEE LLR  + NWC++ +G     T +PTIV+G+ G+PS+LV+++ VI+D+IPV+RRFSGGGTVIVD  ++FVT I N  ++   QPYPRPIM WT   Y  V           F LRENDY FGS KFGGNAQSI K+RW+HHTSFLWD+  SNM+YL LP R PEYR  RSH  FL  +K+  P     + F E  +E LGSHF V+
Sbjct:   11 RPVMNLIKLKE-FSILKQLYLEEKLLRSSSENWCIINNG-----TKQPTIVMGVSGRPSELVNINSVIRDQIPVIRRFSGGGTVIVDNGTIFVTLICNKDDIPGLQPYPRPIMSWTGQFYGEVLREFGD-----FHLRENDYAFGSRKFGGNAQSITKNRWVHHTSFLWDYDVSNMDYLKLPMRAPEYRSARSHVEFLCRMKEILPSK---STFIEGTIETLGSHFSVR 225          
BLAST of EWM22054.1 vs. NCBI_GenBank
Match: gi|460392455|ref|XP_004241831.1| (PREDICTED: uncharacterized protein LOC101252893 isoform X1 [Solanum lycopersicum])

HSP 1 Score: 239.965 bits (611), Expect = 1.684e-75
Identity = 128/259 (49.42%), Postives = 165/259 (63.71%), Query Frame = 0
Query:    1 MSTR---PALHLLRLRNAVGIKDQLWLEEALLRHDTRNWCLLKDGEPAGGTGRPTIVLGIGGKPSKLVHLDRVIQDEIPVLRRFSGGGTVIVDQDSLFVTFIMNTVEVTPNQPYPRPIMEWTAGLYRPVFERLRSAQTKPFELRENDYVFGSLKFGGNAQSIVKDRWLHHTSFLWDFQRSNMEYLTLPERRPEYRQDRSHSSFLTSLKDHTPQGDRLALFRELELELGSHFRV-----QAASEPDVRSDVVERRLGGME 251
            MS+R   P ++L+RL N V I  QL LEE LLR  + NWC++ DG     T  PTIV+GI GKP++L+ +  V+QD+IPV++RFSGGGTVIVD  ++F+TFI NT  +   QPYPRPIM W+  LY  VF+ +       F LRENDYVFG+ KFGGNAQSI K RW+HHTSFLWD++  NM YL LP+R P+YRQ R HS F+  +KD+     R          LGS F +     +++  PD    V   RL G +
Sbjct:    1 MSSRGLLPLMNLVRL-NGVPILQQLQLEERLLRTSSHNWCIVNDG-----TNEPTIVMGISGKPAELLEIGSVLQDKIPVVKRFSGGGTVIVDHQTVFITFICNTDALPSVQPYPRPIMSWSGQLYSKVFQGVGD-----FSLRENDYVFGNRKFGGNAQSITKGRWVHHTSFLWDYEMMNMGYLKLPKRAPDYRQARDHSDFICRMKDYI---SRQEFINRTISALGSQFSITPPELESSDCPDDTKFVPSTRLLGKQ 245          
BLAST of EWM22054.1 vs. NCBI_GenBank
Match: gi|694317642|ref|XP_009339105.1| (PREDICTED: putative lipoate-protein ligase A isoform X1 [Pyrus x bretschneideri])

HSP 1 Score: 238.424 bits (607), Expect = 9.409e-75
Identity = 129/272 (47.43%), Postives = 173/272 (63.60%), Query Frame = 0
Query:    5 PALHLLRLRNAVGIKDQLWLEEALLRHDTRNWCLLKDGEPAGGTGRPTIVLGIGGKPSKLVHLDRVIQDEIPVLRRFSGGGTVIVDQDSLFVTFIMNTVEVTPNQPYPRPIMEWTAGLYRPVFERLRSAQTKPFELRENDYVFGSLKFGGNAQSIVKDRWLHHTSFLWDFQRSNMEYLTLPERRPEYRQDRSHSSFLTSLKDHTPQGDRLALFRELELE-LGSHFRVQAASEPDVRSDVVERRLGGMEAWGKKARTRQVSPAEELSKLDNHS 275
            P ++L++L+  + I  QL LEE LLR  + NWC++ DG     T  P IV+G+ GKP++L+ +D V++D+IPV+RRF+GGGTV VDQ++LFVTFI N   V   QPYPRPIM W++ +Y  VFE L       F+LRENDYVFG+ KFGGNAQSI K+RW+HHTSFLWD+   NM YL  P+R PEYR  R H  F+  +KD+ P+    ++F E  +E LGS F V+       RSD +E           +  TRQ    EE +  D+ +
Sbjct:   15 PLMNLIKLK-GIPILQQLHLEEQLLRTSSHNWCIVNDG-----TNDPAIVMGVSGKPAELLEIDLVLRDQIPVIRRFTGGGTVTVDQNTLFVTFICNKDAVPGLQPYPRPIMSWSSLVYSKVFEGLAD-----FQLRENDYVFGNRKFGGNAQSISKNRWIHHTSFLWDYDVRNMAYLKHPKRVPEYRLARDHLEFICRMKDYIPR----SVFLEKTVEALGSQFSVRPE-----RSDAIEATSSTKFVPSTRLLTRQ--ELEEAAAFDSQA 264          
BLAST of EWM22054.1 vs. NCBI_GenBank
Match: gi|970032667|ref|XP_015077639.1| (PREDICTED: uncharacterized protein LOC107021481 [Solanum pennellii])

HSP 1 Score: 238.039 bits (606), Expect = 1.014e-74
Identity = 123/233 (52.79%), Postives = 155/233 (66.52%), Query Frame = 0
Query:    1 MSTR---PALHLLRLRNAVGIKDQLWLEEALLRHDTRNWCLLKDGEPAGGTGRPTIVLGIGGKPSKLVHLDRVIQDEIPVLRRFSGGGTVIVDQDSLFVTFIMNTVEVTPNQPYPRPIMEWTAGLYRPVFERLRSAQTKPFELRENDYVFGSLKFGGNAQSIVKDRWLHHTSFLWDFQRSNMEYLTLPERRPEYRQDRSHSSFLTSLKDHTPQGDRLALFRELELELGSHFRV 230
            MS+R   P ++L+RL N V I  QL LEE LLR  + NWC++ DG     T  PTIV+GI GKP++L+ +  V+QD++PV++RFSGGGTVIVD  ++F+TFI NT  +   QPYPRPIM W+  LY  VF+ +       F LRENDYVFG+ KFGGNAQSI K RW+HHTSFLWD++  NM YL LP+R PEYRQ R HS F+  +KD+     R          LGS F V
Sbjct:    1 MSSRGLLPLMNLVRL-NGVPILQQLQLEERLLRTSSHNWCIVNDG-----TNEPTIVMGISGKPAELLEIGPVLQDKVPVVKRFSGGGTVIVDHRTVFITFICNTDALPSVQPYPRPIMSWSGQLYSKVFQGVGD-----FSLRENDYVFGNRKFGGNAQSITKRRWVHHTSFLWDYEMMNMGYLKLPKRAPEYRQARDHSDFICRMKDYI---SRQEFINRTISALGSQFSV 219          
BLAST of EWM22054.1 vs. NCBI_GenBank
Match: gi|657965780|ref|XP_008374557.1| (PREDICTED: putative lipoate-protein ligase A [Malus domestica])

HSP 1 Score: 238.039 bits (606), Expect = 1.157e-74
Identity = 122/241 (50.62%), Postives = 165/241 (68.46%), Query Frame = 0
Query:    5 PALHLLRLRNAVGIKDQLWLEEALLRHDTRNWCLLKDGEPAGGTGRPTIVLGIGGKPSKLVHLDRVIQDEIPVLRRFSGGGTVIVDQDSLFVTFIMNTVEVTPNQPYPRPIMEWTAGLYRPVFERLRSAQTKPFELRENDYVFGSLKFGGNAQSIVKDRWLHHTSFLWDFQRSNMEYLTLPERRPEYRQDRSHSSFLTSLKDHTPQGDRLALFRELELE-LGSHFRVQAASEPDVRSDVVE 244
            P ++L+RL+  + I  QL LEE LLR  + NWC++ DG     T  P IV+G+ GKP++L+ +D V++D+IPV+RRF+GGGTV VDQ++LFVTFI N   V   QPYPRPIM W++ +Y  VFE L       F+LRENDYVFG+ KFGGNAQSI K+RW+HHTSFLWD++  NM YL  P+R PEYR  R H  F+  +KD+ P+    ++F E  +E +G+HF V+       +SD +E
Sbjct:   15 PFMNLVRLK-GIPILQQLHLEEQLLRTSSDNWCIINDG-----TNDPAIVMGVSGKPAELLEIDLVLRDQIPVIRRFTGGGTVTVDQNTLFVTFICNKDAVPGLQPYPRPIMSWSSLVYSKVFEGLAD-----FQLRENDYVFGNRKFGGNAQSISKNRWIHHTSFLWDYEVRNMAYLKHPKRVPEYRLARDHLEFICHMKDYIPR----SVFLEKTVEAIGTHFSVRPE-----QSDTIE 235          
BLAST of EWM22054.1 vs. NCBI_GenBank
Match: gi|565374137|ref|XP_006353620.1| (PREDICTED: uncharacterized protein LOC102592930 [Solanum tuberosum])

HSP 1 Score: 236.498 bits (602), Expect = 3.734e-74
Identity = 128/259 (49.42%), Postives = 164/259 (63.32%), Query Frame = 0
Query:    1 MSTR---PALHLLRLRNAVGIKDQLWLEEALLRHDTRNWCLLKDGEPAGGTGRPTIVLGIGGKPSKLVHLDRVIQDEIPVLRRFSGGGTVIVDQDSLFVTFIMNTVEVTPNQPYPRPIMEWTAGLYRPVFERLRSAQTKPFELRENDYVFGSLKFGGNAQSIVKDRWLHHTSFLWDFQRSNMEYLTLPERRPEYRQDRSHSSFLTSLKDHTPQGDRLALFRELELELGSHFRV-----QAASEPDVRSDVVERRLGGME 251
            MS+R   P ++L+RL N V I  QL LEE LLR  + NWC++ DG     T  PTIV+GI GKP++L+ +  V+QD++PV++RFSGGGTVIVD  ++F+TFI NT  +   QPYPRPIM W+  LY  VF+ +       F LRENDY FG+ KFGGNAQSI K RW+HHTSFLWD++  NM YL LP+R PEYRQ R HS F+  +KD+     R          LGS F V     +++  PD    V   RL G +
Sbjct:    1 MSSRGLLPLMNLVRL-NGVPILQQLQLEERLLRTSSHNWCIVNDG-----TNEPTIVMGISGKPAELLEIGPVLQDKVPVVKRFSGGGTVIVDHRTVFITFICNTDALPSVQPYPRPIMSWSGQLYSKVFQGVGD-----FSLRENDYAFGNRKFGGNAQSITKRRWVHHTSFLWDYEMMNMGYLKLPKRAPEYRQARDHSDFICRMKDYI---SRQEFINRTISALGSQFCVTPLDLESSDCPDDTKFVPSTRLLGKQ 245          
BLAST of EWM22054.1 vs. NCBI_GenBank
Match: gi|976923096|gb|KVI07444.1| (Biotin/lipoate A/B protein ligase [Cynara cardunculus var. scolymus])

HSP 1 Score: 234.958 bits (598), Expect = 1.203e-73
Identity = 118/233 (50.64%), Postives = 158/233 (67.81%), Query Frame = 0
Query:    5 PALHLLRLRNAVGIKDQLWLEEALLRHDTRNWCLLKDGEPAGGTGRPTIVLGIGGKPSKLVHLDRVIQDEIPVLRRFSGGGTVIVDQDSLFVTFIMNTVEVTPNQPYPRPIMEWTAGLYRPVFERLRSAQTKPFELRENDYVFGSLKFGGNAQSIVKDRWLHHTSFLWDFQRSNMEYLTLPERRPEYRQDRSHSSFLTSLKDHTPQGDRLALFRELELELGSHFRVQAAS-EP 236
            P ++++R++  V I  QL +EE LLR    NWC++ DG     T  PTIV+GI GKP++LV +  V++D+IPV+RRF+GGGTVIVD  ++FV+FI N   V   QPYPRPIM W++ LY  VF+ +       F LRENDYVFG  KFGGNAQSI K+RW+HHTSFLWD++  NM YL LP+R PEYR  R H  F+  +KDH  + D ++  + ++   GSHF V + + EP
Sbjct:   12 PFMNIVRMK-GVPILQQLEMEERLLRTSLDNWCIINDG-----TDSPTIVMGISGKPAELVEISPVLEDKIPVIRRFTGGGTVIVDHGTIFVSFICNKDAVADVQPYPRPIMSWSSLLYHKVFQGIAD-----FRLRENDYVFGHRKFGGNAQSITKNRWIHHTSFLWDYETRNMSYLKLPKRAPEYRLARDHLDFICPMKDHLSRSDFIS--KTID-AAGSHFSVSSTTIEP 230          
BLAST of EWM22054.1 vs. NCBI_GenBank
Match: gi|645269287|ref|XP_008239929.1| (PREDICTED: lipoate-protein ligase LplJ [Prunus mume])

HSP 1 Score: 235.343 bits (599), Expect = 1.284e-73
Identity = 120/229 (52.40%), Postives = 159/229 (69.43%), Query Frame = 0
Query:    5 PALHLLRLRNAVGIKDQLWLEEALLRHDTRNWCLLKDGEPAGGTGRPTIVLGIGGKPSKLVHLDRVIQDEIPVLRRFSGGGTVIVDQDSLFVTFIMNTVEVTPNQPYPRPIMEWTAGLYRPVFERLRSAQTKPFELRENDYVFGSLKFGGNAQSIVKDRWLHHTSFLWDFQRSNMEYLTLPERRPEYRQDRSHSSFLTSLKDHTPQGDRLALFRELELE-LGSHFRVQA 232
            P ++L+RL+  + I  QL LEE LLR  + NWC++ DG     T  PTIV+GI GKP++L+ LD V++D+IPV+RRF+GGGTV VD +++FVTFI N   V   QPYPRPIM W++ LY  VFE         F+LRENDYVFG+ KFGGNAQSI K RW+HHTSFLWD++  NM YL LP+R PEYR  R H  F+  LKD+ P+    ++F +  ++ LG+ F V++
Sbjct:   12 PFMNLIRLK-GIPILQQLHLEEQLLRTSSDNWCIMNDG-----TKDPTIVMGISGKPAELLELDLVLRDQIPVIRRFTGGGTVTVDHNTVFVTFICNADAVAGLQPYPRPIMSWSSLLYSRVFE-----GRGDFQLRENDYVFGNRKFGGNAQSITKTRWIHHTSFLWDYEVRNMAYLRLPKRIPEYRLARDHLEFICCLKDYIPR----SVFLDKTVDALGTQFSVRS 225          
The following BLAST results are available for this feature:
BLAST of EWM22054.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102469|gb|EWM22054.1|0.000e+0100.00Biotin/lipoate A/B protein ligase [Nannochloropsis... [more]
gi|299471008|emb|CBN78869.1|8.373e-7652.30Biotin/lipoate A/B protein ligase family [Ectocarp... [more]
gi|1147555624|ref|XP_020104512.1|1.466e-7552.84putative lipoate-protein ligase A [Ananas comosus]... [more]
gi|460392455|ref|XP_004241831.1|1.684e-7549.42PREDICTED: uncharacterized protein LOC101252893 is... [more]
gi|694317642|ref|XP_009339105.1|9.409e-7547.43PREDICTED: putative lipoate-protein ligase A isofo... [more]
gi|970032667|ref|XP_015077639.1|1.014e-7452.79PREDICTED: uncharacterized protein LOC107021481 [S... [more]
gi|657965780|ref|XP_008374557.1|1.157e-7450.62PREDICTED: putative lipoate-protein ligase A [Malu... [more]
gi|565374137|ref|XP_006353620.1|3.734e-7449.42PREDICTED: uncharacterized protein LOC102592930 [S... [more]
gi|976923096|gb|KVI07444.1|1.203e-7350.64Biotin/lipoate A/B protein ligase [Cynara carduncu... [more]
gi|645269287|ref|XP_008239929.1|1.284e-7352.40PREDICTED: lipoate-protein ligase LplJ [Prunus mum... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8660rna8660Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications