EWM22054.1, cds8633 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22054.1 vs. NCBI_GenBank
Match: gi|585102469|gb|EWM22054.1| (Biotin/lipoate A/B protein ligase [Nannochloropsis gaditana]) HSP 1 Score: 570.466 bits (1469), Expect = 0.000e+0 Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 0
Query: 1 MSTRPALHLLRLRNAVGIKDQLWLEEALLRHDTRNWCLLKDGEPAGGTGRPTIVLGIGGKPSKLVHLDRVIQDEIPVLRRFSGGGTVIVDQDSLFVTFIMNTVEVTPNQPYPRPIMEWTAGLYRPVFERLRSAQTKPFELRENDYVFGSLKFGGNAQSIVKDRWLHHTSFLWDFQRSNMEYLTLPERRPEYRQDRSHSSFLTSLKDHTPQGDRLALFRELELELGSHFRVQAASEPDVRSDVVERRLGGMEAWGKKARTRQVSPAEELSKLDNHSRC 277
MSTRPALHLLRLRNAVGIKDQLWLEEALLRHDTRNWCLLKDGEPAGGTGRPTIVLGIGGKPSKLVHLDRVIQDEIPVLRRFSGGGTVIVDQDSLFVTFIMNTVEVTPNQPYPRPIMEWTAGLYRPVFERLRSAQTKPFELRENDYVFGSLKFGGNAQSIVKDRWLHHTSFLWDFQRSNMEYLTLPERRPEYRQDRSHSSFLTSLKDHTPQGDRLALFRELELELGSHFRVQAASEPDVRSDVVERRLGGMEAWGKKARTRQVSPAEELSKLDNHSRC
Sbjct: 1 MSTRPALHLLRLRNAVGIKDQLWLEEALLRHDTRNWCLLKDGEPAGGTGRPTIVLGIGGKPSKLVHLDRVIQDEIPVLRRFSGGGTVIVDQDSLFVTFIMNTVEVTPNQPYPRPIMEWTAGLYRPVFERLRSAQTKPFELRENDYVFGSLKFGGNAQSIVKDRWLHHTSFLWDFQRSNMEYLTLPERRPEYRQDRSHSSFLTSLKDHTPQGDRLALFRELELELGSHFRVQAASEPDVRSDVVERRLGGMEAWGKKARTRQVSPAEELSKLDNHSRC 277
BLAST of EWM22054.1 vs. NCBI_GenBank
Match: gi|299471008|emb|CBN78869.1| (Biotin/lipoate A/B protein ligase family [Ectocarpus siliculosus]) HSP 1 Score: 241.121 bits (614), Expect = 8.373e-76 Identity = 125/239 (52.30%), Postives = 160/239 (66.95%), Query Frame = 0
Query: 6 ALHLLRLRNAVGIKDQLWLEEALLRHDTRNWCLLKDGEPAGGTGRPTIVLGIGGKPSKLVHLDRVIQDEIPVLRRFSGGGTVIVDQDSLFVTFIMNTVEVTPNQPYPRPIMEWTAGLYRPVFERLRSAQTKP---FELRENDYVFGSLKFGGNAQSIVKDRWLHHTSFLWDFQRSNMEYLTLPERRPEYRQDRSHSSFLTSLKDHTPQGDRLALFRELELELGSHFRVQAASEPDVRSD 241
L +LRL+ V I QL +EE L T NW +L +G P PT+VLGI GKP K+ +L+ V +D+IP+++RFSGGGTVIVD ++F + I+N +V +PYPR IM+W+ G+Y P F RSA TKP LRENDYVFG LKFGGNAQ+I K RWLHHTSFLWDF +NM YL +PE+RP+YR DR H +FLT LKDH G R L+ +++ G HF ++ S DV D
Sbjct: 4 VLRVLRLKR-VPIFQQLCIEEVLFYKTTSNWLVLNEGHP---QAHPTVVLGISGKPEKMCNLELVERDKIPLIKRFSGGGTVIVDGSTIFASLIVNQADVPECKPYPREIMDWSKGIYGPAF---RSAVTKPELELGLRENDYVFGDLKFGGNAQAITKGRWLHHTSFLWDFDPTNMLYLQMPEKRPQYRGDRDHKAFLTPLKDHV--GRREDLWAAVKVAAGEHFVLEEVSISDVLRD 233
BLAST of EWM22054.1 vs. NCBI_GenBank
Match: gi|1147555624|ref|XP_020104512.1| (putative lipoate-protein ligase A [Ananas comosus] >gi|1147555626|ref|XP_020104521.1| putative lipoate-protein ligase A [Ananas comosus]) HSP 1 Score: 240.35 bits (612), Expect = 1.466e-75 Identity = 121/229 (52.84%), Postives = 155/229 (67.69%), Query Frame = 0
Query: 4 RPALHLLRLRNAVGIKDQLWLEEALLRHDTRNWCLLKDGEPAGGTGRPTIVLGIGGKPSKLVHLDRVIQDEIPVLRRFSGGGTVIVDQDSLFVTFIMNTVEVTPNQPYPRPIMEWTAGLYRPVFERLRSAQTKPFELRENDYVFGSLKFGGNAQSIVKDRWLHHTSFLWDFQRSNMEYLTLPERRPEYRQDRSHSSFLTSLKDHTPQGDRLALFRELELE-LGSHFRVQ 231
RP ++L++L+ I QL+LEE LLR + NWC++ +G T +PTIV+G+ G+PS+LV+++ VI+D+IPV+RRFSGGGTVIVD ++FVT I N ++ QPYPRPIM WT Y V F LRENDY FGS KFGGNAQSI K+RW+HHTSFLWD+ SNM+YL LP R PEYR RSH FL +K+ P + F E +E LGSHF V+
Sbjct: 11 RPVMNLIKLKE-FSILKQLYLEEKLLRSSSENWCIINNG-----TKQPTIVMGVSGRPSELVNINSVIRDQIPVIRRFSGGGTVIVDNGTIFVTLICNKDDIPGLQPYPRPIMSWTGQFYGEVLREFGD-----FHLRENDYAFGSRKFGGNAQSITKNRWVHHTSFLWDYDVSNMDYLKLPMRAPEYRSARSHVEFLCRMKEILPSK---STFIEGTIETLGSHFSVR 225
BLAST of EWM22054.1 vs. NCBI_GenBank
Match: gi|460392455|ref|XP_004241831.1| (PREDICTED: uncharacterized protein LOC101252893 isoform X1 [Solanum lycopersicum]) HSP 1 Score: 239.965 bits (611), Expect = 1.684e-75 Identity = 128/259 (49.42%), Postives = 165/259 (63.71%), Query Frame = 0
Query: 1 MSTR---PALHLLRLRNAVGIKDQLWLEEALLRHDTRNWCLLKDGEPAGGTGRPTIVLGIGGKPSKLVHLDRVIQDEIPVLRRFSGGGTVIVDQDSLFVTFIMNTVEVTPNQPYPRPIMEWTAGLYRPVFERLRSAQTKPFELRENDYVFGSLKFGGNAQSIVKDRWLHHTSFLWDFQRSNMEYLTLPERRPEYRQDRSHSSFLTSLKDHTPQGDRLALFRELELELGSHFRV-----QAASEPDVRSDVVERRLGGME 251
MS+R P ++L+RL N V I QL LEE LLR + NWC++ DG T PTIV+GI GKP++L+ + V+QD+IPV++RFSGGGTVIVD ++F+TFI NT + QPYPRPIM W+ LY VF+ + F LRENDYVFG+ KFGGNAQSI K RW+HHTSFLWD++ NM YL LP+R P+YRQ R HS F+ +KD+ R LGS F + +++ PD V RL G +
Sbjct: 1 MSSRGLLPLMNLVRL-NGVPILQQLQLEERLLRTSSHNWCIVNDG-----TNEPTIVMGISGKPAELLEIGSVLQDKIPVVKRFSGGGTVIVDHQTVFITFICNTDALPSVQPYPRPIMSWSGQLYSKVFQGVGD-----FSLRENDYVFGNRKFGGNAQSITKGRWVHHTSFLWDYEMMNMGYLKLPKRAPDYRQARDHSDFICRMKDYI---SRQEFINRTISALGSQFSITPPELESSDCPDDTKFVPSTRLLGKQ 245
BLAST of EWM22054.1 vs. NCBI_GenBank
Match: gi|694317642|ref|XP_009339105.1| (PREDICTED: putative lipoate-protein ligase A isoform X1 [Pyrus x bretschneideri]) HSP 1 Score: 238.424 bits (607), Expect = 9.409e-75 Identity = 129/272 (47.43%), Postives = 173/272 (63.60%), Query Frame = 0
Query: 5 PALHLLRLRNAVGIKDQLWLEEALLRHDTRNWCLLKDGEPAGGTGRPTIVLGIGGKPSKLVHLDRVIQDEIPVLRRFSGGGTVIVDQDSLFVTFIMNTVEVTPNQPYPRPIMEWTAGLYRPVFERLRSAQTKPFELRENDYVFGSLKFGGNAQSIVKDRWLHHTSFLWDFQRSNMEYLTLPERRPEYRQDRSHSSFLTSLKDHTPQGDRLALFRELELE-LGSHFRVQAASEPDVRSDVVERRLGGMEAWGKKARTRQVSPAEELSKLDNHS 275
P ++L++L+ + I QL LEE LLR + NWC++ DG T P IV+G+ GKP++L+ +D V++D+IPV+RRF+GGGTV VDQ++LFVTFI N V QPYPRPIM W++ +Y VFE L F+LRENDYVFG+ KFGGNAQSI K+RW+HHTSFLWD+ NM YL P+R PEYR R H F+ +KD+ P+ ++F E +E LGS F V+ RSD +E + TRQ EE + D+ +
Sbjct: 15 PLMNLIKLK-GIPILQQLHLEEQLLRTSSHNWCIVNDG-----TNDPAIVMGVSGKPAELLEIDLVLRDQIPVIRRFTGGGTVTVDQNTLFVTFICNKDAVPGLQPYPRPIMSWSSLVYSKVFEGLAD-----FQLRENDYVFGNRKFGGNAQSISKNRWIHHTSFLWDYDVRNMAYLKHPKRVPEYRLARDHLEFICRMKDYIPR----SVFLEKTVEALGSQFSVRPE-----RSDAIEATSSTKFVPSTRLLTRQ--ELEEAAAFDSQA 264
BLAST of EWM22054.1 vs. NCBI_GenBank
Match: gi|970032667|ref|XP_015077639.1| (PREDICTED: uncharacterized protein LOC107021481 [Solanum pennellii]) HSP 1 Score: 238.039 bits (606), Expect = 1.014e-74 Identity = 123/233 (52.79%), Postives = 155/233 (66.52%), Query Frame = 0
Query: 1 MSTR---PALHLLRLRNAVGIKDQLWLEEALLRHDTRNWCLLKDGEPAGGTGRPTIVLGIGGKPSKLVHLDRVIQDEIPVLRRFSGGGTVIVDQDSLFVTFIMNTVEVTPNQPYPRPIMEWTAGLYRPVFERLRSAQTKPFELRENDYVFGSLKFGGNAQSIVKDRWLHHTSFLWDFQRSNMEYLTLPERRPEYRQDRSHSSFLTSLKDHTPQGDRLALFRELELELGSHFRV 230
MS+R P ++L+RL N V I QL LEE LLR + NWC++ DG T PTIV+GI GKP++L+ + V+QD++PV++RFSGGGTVIVD ++F+TFI NT + QPYPRPIM W+ LY VF+ + F LRENDYVFG+ KFGGNAQSI K RW+HHTSFLWD++ NM YL LP+R PEYRQ R HS F+ +KD+ R LGS F V
Sbjct: 1 MSSRGLLPLMNLVRL-NGVPILQQLQLEERLLRTSSHNWCIVNDG-----TNEPTIVMGISGKPAELLEIGPVLQDKVPVVKRFSGGGTVIVDHRTVFITFICNTDALPSVQPYPRPIMSWSGQLYSKVFQGVGD-----FSLRENDYVFGNRKFGGNAQSITKRRWVHHTSFLWDYEMMNMGYLKLPKRAPEYRQARDHSDFICRMKDYI---SRQEFINRTISALGSQFSV 219
BLAST of EWM22054.1 vs. NCBI_GenBank
Match: gi|657965780|ref|XP_008374557.1| (PREDICTED: putative lipoate-protein ligase A [Malus domestica]) HSP 1 Score: 238.039 bits (606), Expect = 1.157e-74 Identity = 122/241 (50.62%), Postives = 165/241 (68.46%), Query Frame = 0
Query: 5 PALHLLRLRNAVGIKDQLWLEEALLRHDTRNWCLLKDGEPAGGTGRPTIVLGIGGKPSKLVHLDRVIQDEIPVLRRFSGGGTVIVDQDSLFVTFIMNTVEVTPNQPYPRPIMEWTAGLYRPVFERLRSAQTKPFELRENDYVFGSLKFGGNAQSIVKDRWLHHTSFLWDFQRSNMEYLTLPERRPEYRQDRSHSSFLTSLKDHTPQGDRLALFRELELE-LGSHFRVQAASEPDVRSDVVE 244
P ++L+RL+ + I QL LEE LLR + NWC++ DG T P IV+G+ GKP++L+ +D V++D+IPV+RRF+GGGTV VDQ++LFVTFI N V QPYPRPIM W++ +Y VFE L F+LRENDYVFG+ KFGGNAQSI K+RW+HHTSFLWD++ NM YL P+R PEYR R H F+ +KD+ P+ ++F E +E +G+HF V+ +SD +E
Sbjct: 15 PFMNLVRLK-GIPILQQLHLEEQLLRTSSDNWCIINDG-----TNDPAIVMGVSGKPAELLEIDLVLRDQIPVIRRFTGGGTVTVDQNTLFVTFICNKDAVPGLQPYPRPIMSWSSLVYSKVFEGLAD-----FQLRENDYVFGNRKFGGNAQSISKNRWIHHTSFLWDYEVRNMAYLKHPKRVPEYRLARDHLEFICHMKDYIPR----SVFLEKTVEAIGTHFSVRPE-----QSDTIE 235
BLAST of EWM22054.1 vs. NCBI_GenBank
Match: gi|565374137|ref|XP_006353620.1| (PREDICTED: uncharacterized protein LOC102592930 [Solanum tuberosum]) HSP 1 Score: 236.498 bits (602), Expect = 3.734e-74 Identity = 128/259 (49.42%), Postives = 164/259 (63.32%), Query Frame = 0
Query: 1 MSTR---PALHLLRLRNAVGIKDQLWLEEALLRHDTRNWCLLKDGEPAGGTGRPTIVLGIGGKPSKLVHLDRVIQDEIPVLRRFSGGGTVIVDQDSLFVTFIMNTVEVTPNQPYPRPIMEWTAGLYRPVFERLRSAQTKPFELRENDYVFGSLKFGGNAQSIVKDRWLHHTSFLWDFQRSNMEYLTLPERRPEYRQDRSHSSFLTSLKDHTPQGDRLALFRELELELGSHFRV-----QAASEPDVRSDVVERRLGGME 251
MS+R P ++L+RL N V I QL LEE LLR + NWC++ DG T PTIV+GI GKP++L+ + V+QD++PV++RFSGGGTVIVD ++F+TFI NT + QPYPRPIM W+ LY VF+ + F LRENDY FG+ KFGGNAQSI K RW+HHTSFLWD++ NM YL LP+R PEYRQ R HS F+ +KD+ R LGS F V +++ PD V RL G +
Sbjct: 1 MSSRGLLPLMNLVRL-NGVPILQQLQLEERLLRTSSHNWCIVNDG-----TNEPTIVMGISGKPAELLEIGPVLQDKVPVVKRFSGGGTVIVDHRTVFITFICNTDALPSVQPYPRPIMSWSGQLYSKVFQGVGD-----FSLRENDYAFGNRKFGGNAQSITKRRWVHHTSFLWDYEMMNMGYLKLPKRAPEYRQARDHSDFICRMKDYI---SRQEFINRTISALGSQFCVTPLDLESSDCPDDTKFVPSTRLLGKQ 245
BLAST of EWM22054.1 vs. NCBI_GenBank
Match: gi|976923096|gb|KVI07444.1| (Biotin/lipoate A/B protein ligase [Cynara cardunculus var. scolymus]) HSP 1 Score: 234.958 bits (598), Expect = 1.203e-73 Identity = 118/233 (50.64%), Postives = 158/233 (67.81%), Query Frame = 0
Query: 5 PALHLLRLRNAVGIKDQLWLEEALLRHDTRNWCLLKDGEPAGGTGRPTIVLGIGGKPSKLVHLDRVIQDEIPVLRRFSGGGTVIVDQDSLFVTFIMNTVEVTPNQPYPRPIMEWTAGLYRPVFERLRSAQTKPFELRENDYVFGSLKFGGNAQSIVKDRWLHHTSFLWDFQRSNMEYLTLPERRPEYRQDRSHSSFLTSLKDHTPQGDRLALFRELELELGSHFRVQAAS-EP 236
P ++++R++ V I QL +EE LLR NWC++ DG T PTIV+GI GKP++LV + V++D+IPV+RRF+GGGTVIVD ++FV+FI N V QPYPRPIM W++ LY VF+ + F LRENDYVFG KFGGNAQSI K+RW+HHTSFLWD++ NM YL LP+R PEYR R H F+ +KDH + D ++ + ++ GSHF V + + EP
Sbjct: 12 PFMNIVRMK-GVPILQQLEMEERLLRTSLDNWCIINDG-----TDSPTIVMGISGKPAELVEISPVLEDKIPVIRRFTGGGTVIVDHGTIFVSFICNKDAVADVQPYPRPIMSWSSLLYHKVFQGIAD-----FRLRENDYVFGHRKFGGNAQSITKNRWIHHTSFLWDYETRNMSYLKLPKRAPEYRLARDHLDFICPMKDHLSRSDFIS--KTID-AAGSHFSVSSTTIEP 230
BLAST of EWM22054.1 vs. NCBI_GenBank
Match: gi|645269287|ref|XP_008239929.1| (PREDICTED: lipoate-protein ligase LplJ [Prunus mume]) HSP 1 Score: 235.343 bits (599), Expect = 1.284e-73 Identity = 120/229 (52.40%), Postives = 159/229 (69.43%), Query Frame = 0
Query: 5 PALHLLRLRNAVGIKDQLWLEEALLRHDTRNWCLLKDGEPAGGTGRPTIVLGIGGKPSKLVHLDRVIQDEIPVLRRFSGGGTVIVDQDSLFVTFIMNTVEVTPNQPYPRPIMEWTAGLYRPVFERLRSAQTKPFELRENDYVFGSLKFGGNAQSIVKDRWLHHTSFLWDFQRSNMEYLTLPERRPEYRQDRSHSSFLTSLKDHTPQGDRLALFRELELE-LGSHFRVQA 232
P ++L+RL+ + I QL LEE LLR + NWC++ DG T PTIV+GI GKP++L+ LD V++D+IPV+RRF+GGGTV VD +++FVTFI N V QPYPRPIM W++ LY VFE F+LRENDYVFG+ KFGGNAQSI K RW+HHTSFLWD++ NM YL LP+R PEYR R H F+ LKD+ P+ ++F + ++ LG+ F V++
Sbjct: 12 PFMNLIRLK-GIPILQQLHLEEQLLRTSSDNWCIMNDG-----TKDPTIVMGISGKPAELLELDLVLRDQIPVIRRFTGGGTVTVDHNTVFVTFICNADAVAGLQPYPRPIMSWSSLLYSRVFE-----GRGDFQLRENDYVFGNRKFGGNAQSITKTRWIHHTSFLWDYEVRNMAYLRLPKRIPEYRLARDHLEFICCLKDYIPR----SVFLDKTVDALGTQFSVRS 225 The following BLAST results are available for this feature:
BLAST of EWM22054.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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