EWM22051.1, cds8631 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22051.1 vs. NCBI_GenBank
Match: gi|585102466|gb|EWM22051.1| (der1-like domain member 1 [Nannochloropsis gaditana]) HSP 1 Score: 791.186 bits (2042), Expect = 0.000e+0 Identity = 386/386 (100.00%), Postives = 386/386 (100.00%), Query Frame = 0
Query: 1 MWQEGAQAGKARWLWTLLLILLTTTSLQSTRLEAPQQPPSKLSLKRRSPCRSEATKRLKNRSYASSCGYVFDSHQSFGPPGKNGGQTNPVRWLARARGGVQPAQKKSKVKANGPAAQGNKIRYAKEASTKQKVKEWYQATPLVTRLHLTASLVLTGLGIIILDPAYFLLDPVRTITKAQIWRPFTAAAFLGPPSMSWVSNLYFLHQYGTALEKSQGTAQQLVFLLFNIGVLSVLGSLMGLPITSNALITAALHCLGRQDPLRDVNWMFSIKIKYWMLPFCLALVDMLQAQNPLAALPAALGILSGHMYYFLRQVWPKMGHRELLLAPEWLCKVLNRHNDDVIFQRRNKPLVTTGASSSEGESGVLPNLSSVLKKKSKVYKMKKTPS 386
MWQEGAQAGKARWLWTLLLILLTTTSLQSTRLEAPQQPPSKLSLKRRSPCRSEATKRLKNRSYASSCGYVFDSHQSFGPPGKNGGQTNPVRWLARARGGVQPAQKKSKVKANGPAAQGNKIRYAKEASTKQKVKEWYQATPLVTRLHLTASLVLTGLGIIILDPAYFLLDPVRTITKAQIWRPFTAAAFLGPPSMSWVSNLYFLHQYGTALEKSQGTAQQLVFLLFNIGVLSVLGSLMGLPITSNALITAALHCLGRQDPLRDVNWMFSIKIKYWMLPFCLALVDMLQAQNPLAALPAALGILSGHMYYFLRQVWPKMGHRELLLAPEWLCKVLNRHNDDVIFQRRNKPLVTTGASSSEGESGVLPNLSSVLKKKSKVYKMKKTPS
Sbjct: 1 MWQEGAQAGKARWLWTLLLILLTTTSLQSTRLEAPQQPPSKLSLKRRSPCRSEATKRLKNRSYASSCGYVFDSHQSFGPPGKNGGQTNPVRWLARARGGVQPAQKKSKVKANGPAAQGNKIRYAKEASTKQKVKEWYQATPLVTRLHLTASLVLTGLGIIILDPAYFLLDPVRTITKAQIWRPFTAAAFLGPPSMSWVSNLYFLHQYGTALEKSQGTAQQLVFLLFNIGVLSVLGSLMGLPITSNALITAALHCLGRQDPLRDVNWMFSIKIKYWMLPFCLALVDMLQAQNPLAALPAALGILSGHMYYFLRQVWPKMGHRELLLAPEWLCKVLNRHNDDVIFQRRNKPLVTTGASSSEGESGVLPNLSSVLKKKSKVYKMKKTPS 386
BLAST of EWM22051.1 vs. NCBI_GenBank
Match: gi|1210520594|dbj|GAX20587.1| (hypothetical protein FisN_3Hu563 [Fistulifera solaris]) HSP 1 Score: 177.563 bits (449), Expect = 5.512e-49 Identity = 83/173 (47.98%), Postives = 121/173 (69.94%), Query Frame = 0
Query: 169 LDPVRTITKAQIWRPFTAAAFLGPPSMSWVSNLYFLHQYGTALEKSQGTAQQLVFLLFNIGVLSVLGSLMGLPITSNALITAALHCLGRQDPLRDVNWMFSIKIKYWMLPFCLALVDMLQAQNPLAALPAALGILSGHMYYFLRQVWPKMGH-RELLLAPEWLCKVLNRHNDD 340
LDP+R + Q+WRP TAA FLGPPS+SW+ N Y+L QYG++LE++ GTAQ VFLL + +LS+ +L+G P +N++IT+ LH L R P + V W+ + YW LP+ L D+LQAQ+P+AALP +GIL+GH Y+F + +WPK+ ++ L+APE+L K L+ + D
Sbjct: 124 LDPMRVLYGLQLWRPITAATFLGPPSISWLLNGYYLFQYGSSLERAYGTAQHSVFLLSQLVLLSIFSTLVGQPFFANSMITSMLHVLSRSMPHQKVKWLV-FTVPYWSLPYGLMASDVLQAQSPMAALPHIMGILTGHFYHFHKHIWPKLEQGQDWLVAPEFLSKRLDPADKD 295
BLAST of EWM22051.1 vs. NCBI_GenBank
Match: gi|944186099|dbj|BAT25218.1| (symbiotic PPC-localized Der [Nitzschia sp. IriIs04]) HSP 1 Score: 177.178 bits (448), Expect = 7.953e-49 Identity = 95/246 (38.62%), Postives = 152/246 (61.79%), Query Frame = 0
Query: 97 RGGVQPAQKKSKVK----ANGPAAQGNKIRYAKEASTKQKVKEWYQATPLVTRLHLTASLVLTGLGIII---LDPAYFLLDPVRTITKAQIWRPFTAAAFLGPPSMSWVSNLYFLHQYGTALEKSQGTAQQLVFLLFNIGVLSVLGSLMGLPITSNALITAALHCLGRQDPLRDVNWMFSIKIKYWMLPFCLALVDMLQAQNPLAALPAALGILSGHMYYFLRQVWPKMGHRELLLAPEWLCKVLN 335
RGG + ++ S +K G G+K++ K++ + ++ + + P TR ++TA V T LG+++ L + LDP+RT+ +IWR FTAA++LG PS++W+ + Y+L QYG++LE++ G AQ +VFL + +LS+L L G P + ++ITA LH L R P + V W+ + YW LP+ L D+LQAQ+ AA+P LGI+SGH ++F R +WPK+G + L AP +L K ++
Sbjct: 51 RGGAK--KRGSSIKPAKTVTGKKKVGDKLKAEKQSPVSKLLENYRKVLP-YTRAYITAIGVCTLLGVVLGEELSQSILALDPLRTLAGGEIWRFFTAASYLGTPSVTWLLDSYYLLQYGSSLEQAYGAAQYVVFLFSQLAILSILSILFGQPFFARSMITAMLHVLSRAMPKQQVRWLI-FTVPYWSLPYGLMATDVLQAQSAGAAVPHILGIISGHFFHFHRFIWPKVGGEDWLKAPAFLSKYVD 292
BLAST of EWM22051.1 vs. NCBI_GenBank
Match: gi|224009223|ref|XP_002293570.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220970970|gb|EED89306.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 171.785 bits (434), Expect = 4.168e-48 Identity = 84/185 (45.41%), Postives = 121/185 (65.41%), Query Frame = 0
Query: 154 LTGLGIIILDP---AYFLLDPVRTITKAQIWRPFTAAAFLGPPSMSWVSNLYFLHQYGTALEKSQGTAQQLVFLLFNIGVLSVLGSLMGLPITSNALITAALHCLGRQDPLRDVNWMFSIKIKYWMLPFCLALVDMLQAQNPLAALPAALGILSGHMYYFLRQVWPKMGHRELLLAPEWLCKVLN 335
+T LG+++ D LDP+R + ++WRPFTAA FLGPPS+ W+ N Y+L +YG++LE++ GT+Q ++FLL IG LSV + G P + ++IT+ LH L R P + V W+ + YW LP+ L D+LQA N AALP LGILSGH+YYF + VWPK+G + L+ P +L + L+
Sbjct: 5 VTLLGLVLGDELSQGLLALDPIRVMYGLELWRPFTAACFLGPPSIGWLMNAYYLFEYGSSLERAFGTSQHMLFLLLQIGFLSVFSAFFGQPFFAQSVITSMLHVLSRSMPNQQVKWLI-FTVPYWTLPYGLMASDVLQAGNAAAALPHVLGILSGHLYYFHKNVWPKIGGEDWLVPPMFLQRKLD 188
BLAST of EWM22051.1 vs. NCBI_GenBank
Match: gi|219109773|ref|XP_002176640.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411175|gb|EEC51103.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 173.711 bits (439), Expect = 1.873e-47 Identity = 90/229 (39.30%), Postives = 138/229 (60.26%), Query Frame = 0
Query: 125 KEASTKQKVKEWYQATPLVTRLHLTASLVLTGLGIII---LDPAYFLLDPVRTITKAQIWRPFTAAAFLGPPSMSWVSNLYFLHQYGTALEKSQGTAQQLVFLLFNIGVLSVLGSLMGLPITSNALITAALHCLGRQDPLRDVNWMFSIKIKYWMLPFCLALVDMLQAQNPLAALPAALGILSGHMYYFLRQVWPKMGHRELLLAPEWLCKVLNRHNDDVIFQRRNKPL 350
K+++ ++ + + PL TR+++T V T + II + LDP R + WRPFTAA+FLGP S+ W+ + Y+L +YG++LE++ GTAQ VFL+ + L+ L SL G P ++ITA LH L R P + V W+ + YW LP+ L D+LQAQ+ +AALP LGI+SGH Y+F + +WPK G + L+AP++L + L+ + D + +K L
Sbjct: 86 KKSALSDTMQRYKRIRPL-TRIYITMVGVATLISIIFGEEFTQSLLALDPTRAFYGFEFWRPFTAASFLGPISIGWLMSGYYLFEYGSSLERAYGTAQHFVFLMSQVFGLTFLSSLTGQPFFGQSMITAMLHVLSRAMPHQKVKWLI-FTVPYWSLPYGLMASDVLQAQSAMAALPHILGIVSGHFYHFHKFIWPKKGGEDWLVAPDFLVRRLDPDSKDAARESVSKAL 312
BLAST of EWM22051.1 vs. NCBI_GenBank
Match: gi|1072234022|gb|OEU18752.1| (hypothetical protein FRACYDRAFT_268432 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 171.785 bits (434), Expect = 2.047e-46 Identity = 86/204 (42.16%), Postives = 134/204 (65.69%), Query Frame = 0
Query: 135 EWYQATPLVTRLHLTASLVLTGLGIIILDP---AYFLLDPVRTITKAQIWRPFTAAAFLGPPSMSWVSNLYFLHQYGTALEKSQGTAQQLVFLLFNIGVLSVLGSLMGLPITSNALITAALHCLGRQDPLRDVNWMFSIKIKYWMLPFCLALVDMLQAQNPLAALPAALGILSGHMYYFLRQVWPKMGHRELLLAPEWLCKVLN 335
++Y+ P +TR ++T + T LG+++ + A LDP+R + +IWRPFTAA+FLG PS+SW+ + Y+LH+YG++LE++ G A+ L+FL I +L++ ++G+P +N++ITA L L R P V W+ I + YW+LP+ L D+LQAQ+ AA+P LGIL GH Y+F R VWPK G + L AP++L ++
Sbjct: 123 DYYKEIPPLTRGYVTMIGLCTVLGLLLGEERAQAVLALDPMRLLHGMEIWRPFTAASFLGKPSISWLMSGYYLHEYGSSLERAYGPAEYLLFLCSQIFLLTIFSMVLGVPFFTNSIITAMLWVLSRAMPNEKVKWLV-ITVPYWVLPYGLMASDVLQAQSAAAAMPHILGILVGHFYHFHRFVWPKTGGEDWLRAPDFLVDAMD 325
BLAST of EWM22051.1 vs. NCBI_GenBank
Match: gi|397639205|gb|EJK73444.1| (hypothetical protein THAOC_04933 [Thalassiosira oceanica]) HSP 1 Score: 163.31 bits (412), Expect = 2.347e-43 Identity = 95/260 (36.54%), Postives = 144/260 (55.38%), Query Frame = 0
Query: 90 VRWLARARGGVQPAQKKSKVKANGPAAQ-----GNKIRYAKEASTKQKVKEWYQATPLVTRLHLTASLVLTGLGIII---LDPAYFLLDPVRTITKAQIWRPFTAAAFLGPPSMSWVSNLYFLHQYGTALEKSQGTAQQLVFLLFNIGVLSVLGSLMGLPITSNALITAALHCLGRQDPLRDVNWMFSIKIKYWMLPFCLALVDMLQAQN-----PLAALPAALGILSGHMYYFLRQVWPKM-GHRELLLAPEWLCKVLN 335
+R A+ RGG + SK K + NK K A + Q K Y+A +TR+++T ++T LG+++ + LDP+R + ++WRP TAA FLG PS+ W+ N Y+L YG++LE+ GTAQ +FL+ I +LS+ + GLP + ++IT+ LH L R P + V W+ + YW LP+ L D LQA + AALP LGILSGH+Y+F + +WP+ G + L AP +L + +
Sbjct: 57 LRGGAKKRGGRTASLHSSKDKGTTVTGKQKVKGSNKQDVKKSAVSDQLAK--YKAMLPLTRVYITMVGIVTLLGLVLGEEISQGLLALDPIRVMYGFELWRPITAACFLGSPSIGWLMNAYYLFTYGSSLERGVGTAQHFLFLMIQICLLSIFSAFFGLPFFAQSVITSMLHVLSRSMPTQPVKWLV-FTVPYWTLPYGLMASDALQAGSSGGSPAAAALPHILGILSGHIYFFHKSIWPRSEGAEDWLNAPAFLSRRFD 313
BLAST of EWM22051.1 vs. NCBI_GenBank
Match: gi|873226636|emb|CEM20934.1| (unnamed protein product [Vitrella brassicaformis CCMP3155]) HSP 1 Score: 154.451 bits (389), Expect = 6.869e-40 Identity = 77/202 (38.12%), Postives = 125/202 (61.88%), Query Frame = 0
Query: 162 LDPAYFLLDPVRTITKAQIWRPFTAAAFLGPPSMSWVSNLYFLHQYGTALEKSQGTAQQLVFLLFNIGVLSVLGSLMGLPITSNALITAALHCLGRQDPLRDVNWMFSIKIKYWMLPFCLALVDMLQAQNPLAALPAALGILSGHMYYFLRQVWPKMGHRELLLAPEWLCKVLNRHNDDVIFQRRNKPLVTTGASSSEGESG 363
+DP+ F L+ RT+ + WRPFTA AF G ++S +S +YF+ QYG +LE+++G+A+QLVF+L + +LS++G LP T A +A ++ R++P V +I+++YW +PF A++D+L AQ AA+P +GI +GH Y+F Q++P MG L AP WL + ++ +D +++ PL G S G+ G
Sbjct: 140 VDPSVFALEWERTVRSFEFWRPFTAMAFQGDLTLSMISTMYFMWQYGQSLEEAKGSAEQLVFMLTQVILLSLIGFRFQLPFTGRAFSSALVYACSRREPFAMVPVFLNIRVQYWKVPFAQAVIDVLSAQKINAAIPHLMGIATGHFYHFFNQIYPGMGGYAWLSAPRWLRRRID--SDKHVYE----PLSAAG-SKRRGDQG 334
BLAST of EWM22051.1 vs. NCBI_GenBank
Match: gi|397633608|gb|EJK71058.1| (hypothetical protein THAOC_07539 [Thalassiosira oceanica]) HSP 1 Score: 147.517 bits (371), Expect = 1.109e-38 Identity = 76/189 (40.21%), Postives = 114/189 (60.32%), Query Frame = 0
Query: 153 VLTGLGIII---LDPAYFLLDPVRTITKAQIWRPFTAAAFLGPPSMSWVSNLYFLHQYGTALEKSQGTAQQLVFLLFNIGVLSVLGSLMGLPITSNALITAALHCLGRQDPLRDVNWMFSIKIKYWMLPFCLALVDMLQAQN-----PLAALPAALGILSGHMYYFLRQVWPKM-GHRELLLAPEWLCK 332
++T LG+++ + LDP+R + ++WRP TAA FLG PS+ W+ N Y+L YG++LE+ GTAQ +FL+ I +LS+ + GLP + ++IT+ LH L R P + V W+ + YW LP+ L D LQA + AALP LGILSGH+Y+F + +WP+ G + L AP +L +
Sbjct: 4 IVTLLGLVLGEEISQGLLALDPIRVMYGFELWRPITAACFLGSPSIGWLMNAYYLFTYGSSLERGVGTAQHFLFLMIQICILSIFSAFFGLPFFAQSVITSMLHVLSRSMPTQPVKWLV-FTVPYWTLPYGLMASDALQAGSSGGSPAAAALPHILGILSGHIYFFHKSIWPRSEGAEDWLNAPAFLSR 191
BLAST of EWM22051.1 vs. NCBI_GenBank
Match: gi|298706524|emb|CBJ29494.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 149.058 bits (375), Expect = 1.098e-37 Identity = 93/274 (33.94%), Postives = 150/274 (54.74%), Query Frame = 0
Query: 93 LARARGGVQPAQKKSKVKANGPAAQGNKIRYAKEASTKQKVKEWYQATPLVTRLHLTASLVLTGLGIII---LDPA-YFLLDPVRTITKAQIWRPFTAAAFLGPPSMSWVSNLYFLHQYGTALEKSQGTAQQLVFLLFNIGVLSVLGSLMGLPITSNALITAALHCLGRQDPLRDVNWMFSIKIKYWMLPFCLALVDMLQAQ-NPLAALPAALGILSGHMYYFLRQVWPKMGHRELLLAPEWLCKVLNRHNDDVIFQRRNKPLVTTGASSSEGE 361
+AR RGGV+ A K+ + + + S V ++ P TR ++ +V+T + + + +D F +D RT+ ++WRP T+ +LGP SMSW++N+YFL Q+GT LE GTA+Q++FLL +L LG L+G+P+ S +++ A + R DPL V + F ++I W LPF +LQA+ +PLAA+P +GIL GH+Y+F V P MG + L AP W+ + L+ ++ + ++P G G+
Sbjct: 65 VARLRGGVKRATVKADDEDDDADENDDADAGPGALSALTGV---FKNMPPATRAYVLLLMVITAVDVSVGKAIDSGNTFSMDWGRTVKGLELWRPLTSLVYLGPLSMSWLTNVYFLTQHGTRLELVSGTAEQVIFLLVVGSLLLFLGPLIGMPLLSTSMVAAHTYVSARMDPLGAVQFQF-LRIPMWTLPFAQMGAAVLQAEGSPLAAIPHFVGILCGHVYHFFTVVHPLMGAKRRLGAPGWMKRRLDGGDNPNFMETPDEPAAPRGRKIGAGK 334 The following BLAST results are available for this feature:
BLAST of EWM22051.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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