EWM22053.1, cds8626 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22053.1 vs. NCBI_GenBank
Match: gi|585102468|gb|EWM22053.1| (formamidopyrimidine-dna glycosylase [Nannochloropsis gaditana]) HSP 1 Score: 802.742 bits (2072), Expect = 0.000e+0 Identity = 389/389 (100.00%), Postives = 389/389 (100.00%), Query Frame = 0 Query: 1 MITRHCSLLPRSLRLDSVLLVTLLLILVSSFSKTSAYSFRLRMVEGHGCHRVVAAHRRLLLGHVFQATSPNGRFLEGAKLIDGKRLARVEAVGKNLFYFWTPAAILPGTPPPPVVKRGTGKRKPIEIATSSEETVVMHVHFGMSGAFSVSPFPGKVATPTTRLFLVNKERNLTASLSAMTCVHGGLELFEGKLEALGPDPLREDADKERLWGKMQATSKAIGQILMDQSCVAGIGNIYRAEILFKSGVHPEQPANTVAHAAFETLWMHSVLLLQRGFTSGSILTVDPSEASRLGPPWTRRYIYNHSHCGRCGSRIQNWSMAGRTATQEQTAAPGQPQNRVGSGCSRHRSNGLDGEYTSRGKRVTEKQGQRESSTGSSISTLYMYTVASA 389 MITRHCSLLPRSLRLDSVLLVTLLLILVSSFSKTSAYSFRLRMVEGHGCHRVVAAHRRLLLGHVFQATSPNGRFLEGAKLIDGKRLARVEAVGKNLFYFWTPAAILPGTPPPPVVKRGTGKRKPIEIATSSEETVVMHVHFGMSGAFSVSPFPGKVATPTTRLFLVNKERNLTASLSAMTCVHGGLELFEGKLEALGPDPLREDADKERLWGKMQATSKAIGQILMDQSCVAGIGNIYRAEILFKSGVHPEQPANTVAHAAFETLWMHSVLLLQRGFTSGSILTVDPSEASRLGPPWTRRYIYNHSHCGRCGSRIQNWSMAGRTATQEQTAAPGQPQNRVGSGCSRHRSNGLDGEYTSRGKRVTEKQGQRESSTGSSISTLYMYTVASA Sbjct: 1 MITRHCSLLPRSLRLDSVLLVTLLLILVSSFSKTSAYSFRLRMVEGHGCHRVVAAHRRLLLGHVFQATSPNGRFLEGAKLIDGKRLARVEAVGKNLFYFWTPAAILPGTPPPPVVKRGTGKRKPIEIATSSEETVVMHVHFGMSGAFSVSPFPGKVATPTTRLFLVNKERNLTASLSAMTCVHGGLELFEGKLEALGPDPLREDADKERLWGKMQATSKAIGQILMDQSCVAGIGNIYRAEILFKSGVHPEQPANTVAHAAFETLWMHSVLLLQRGFTSGSILTVDPSEASRLGPPWTRRYIYNHSHCGRCGSRIQNWSMAGRTATQEQTAAPGQPQNRVGSGCSRHRSNGLDGEYTSRGKRVTEKQGQRESSTGSSISTLYMYTVASA 389
BLAST of EWM22053.1 vs. NCBI_GenBank
Match: gi|760441245|ref|XP_011397691.1| (Endonuclease 8 1 [Auxenochlorella protothecoides] >gi|675352363|gb|KFM24803.1| Endonuclease 8 1 [Auxenochlorella protothecoides]) HSP 1 Score: 317.39 bits (812), Expect = 3.239e-102 Identity = 162/306 (52.94%), Postives = 196/306 (64.05%), Query Frame = 0 Query: 43 MVEGHGCHRVVAAHRRLLLGHVFQATSPNGRFLEGAKLIDGKRLARVEAVGKNLFYFWTPAAILPGTPPPPVVKRGTGKRKPIEIATSSEETVVMHVHFGMSGAFSVSPFPGKVATPTTRLFLVNKERNLTASLSAMTCVHGGLELFEGKLEALGPDPLREDADKERLWGKMQATSKAIGQILMDQSCVAGIGNIYRAEILFKSGVHPEQPANTVAHAAFETLWMHSVLLLQRGFTSGSILTVDPSEASRLGPPWTRRYIYNHSHCGRCGSRIQNWSMAGRT-----ATQEQTAAPGQPQNRVGSG 343 MVEGH CHRV AHRR LLG F+A+SPNGRF +GA + + L R+E GK LFYF+ GT + PI V+H HFGMSGAF + PG T TTRL L+++E + LSAMT +HG +L++ K LGPDPLREDAD+E +W + + K+IG +LMDQS VAGIGNIYRAEIL+K+GVHPEQP NT++ AF+ LW HSVLLLQRGF +GSILTVD EA LGP W RRYIYN + CGRCG R+ W MAGRT E AA G P+ +G Sbjct: 1 MVEGHQCHRVAHAHRRQLLGRRFKASSPNGRFTDGAAALHDQPLHRIEVHGKYLFYFF-----------------GTDPKDPI----------VLHFHFGMSGAFRTTALPGPEPTATTRLQLLDQEAGTVSHLSAMTVLHGSRDLYDAKRSKLGPDPLREDADEELVWSTVSTSKKSIGLLLMDQSVVAGIGNIYRAEILYKAGVHPEQPGNTLSVEAFQRLWRHSVLLLQRGFATGSILTVDEGEAPSLGPAWARRYIYNQARCGRCGGRVATWDMAGRTEFLSHCAPEDPAALGSPKKMTVAG 279
BLAST of EWM22053.1 vs. NCBI_GenBank
Match: gi|255077513|ref|XP_002502394.1| (DNA glycosylase [Micromonas commoda] >gi|226517659|gb|ACO63652.1| DNA glycosylase [Micromonas commoda]) HSP 1 Score: 303.523 bits (776), Expect = 3.526e-96 Identity = 153/283 (54.06%), Postives = 181/283 (63.96%), Query Frame = 0 Query: 43 MVEGHGCHRVVAAHRRLLLGHVFQATSPNGRFLEGAKLIDGKRLARVEAVGKNLFYFWTPAAILPGTPPPPVVKRGTGKRKPIEIATSSEETVVMHVHFGMSGAFSVS-PFPGKVATPTTRLFLVNKERNLTASLSAMTCVHGGLELFEGKLEALGPDPLREDADKERLWGKMQATSKAIGQILMDQSCVAGIGNIYRAEILFKSGVHPEQPANTVAHAAFETLWMHSVLLLQRGFTSGSILTVDPSEASRLGPPWTRRYIYNHSHCGRCGSRIQNWSMAGRT 324 MVEGHG HRV A+ RR L+G F ATSPNGRF GA++IDGK L RV+A+GKNLFYF+ A + VMHVHFGMSG FS PG TTRL L ++E + A LSAMT G + LF+ K LG DPLREDAD +RLW K + K++G LMDQ+ AG+GNIYRAEIL+K+GVHPEQP + AF+ +W HSV LLQRGF +GSILTVDP EA LG PWTRRY+YN CGRCGS ++ W MA RT Sbjct: 1 MVEGHGVHRVAASARRHLVGKRFTATSPNGRFAHGAEVIDGKELKRVDAIGKNLFYFFNEA--------------------------DGPDAHVMHVHFGMSGRFSTHHTLPGPEPGATTRLRLESREHGICALLSAMTVELGDISLFQTKRAKLGEDPLREDADADRLWEKFTRSRKSVGLALMDQAMFAGVGNIYRAEILYKAGVHPEQPCADLPRPAFDEVWRHSVELLQRGFVTGSILTVDPDEAKTLGEPWTRRYVYNQRSCGRCGSAVKTWDMAART 257
BLAST of EWM22053.1 vs. NCBI_GenBank
Match: gi|926791967|ref|XP_013904457.1| (endonuclease VIII [Monoraphidium neglectum] >gi|761975486|gb|KIZ05438.1| endonuclease VIII [Monoraphidium neglectum]) HSP 1 Score: 308.531 bits (789), Expect = 1.264e-95 Identity = 161/322 (50.00%), Postives = 198/322 (61.49%), Query Frame = 0 Query: 43 MVEGHGCHRVVAAHRRLLLGHVFQATSPNGRFLEGAKLIDGKRLARVE-----------------------AV--------------GKNLFYFWTPAAILPGTPPPPVVKRGTGKRKPIEIATSSEETVVMHVHFGMSGAFSVSPFPGKVATP---TTRLFLVNKERNLTASLSAMTCVHGGLELFEGKLEALGPDPLREDADKERLWGKMQATSKAIGQILMDQSCVAGIGNIYRAEILFKSGVHPEQPANTVAHAAFETLWMHSVLLLQRGFTSGSILTVDPSEASRLGPPWTRRYIYNHSHCGRCGSRIQNWSMAGRT 324 MVEGH CHRV AHR+LL+G F+ATSPNGRF +GA+ IDGK L+R+E AV GKNLFYF+ G+R+ + + + V+H+HFGMSGAF P + P TTRL L + L A LSAMT HGG+EL+ K LGPDPLREDAD E LW K+Q K IG +LMDQ+ +AG+GNIYRAE+L+K+ +HPEQPANT++ AF+T+W HSV LLQRGFTSGSILTVDP +A LG PWTRRYIYNH+ CGRC +++W MA RT Sbjct: 1 MVEGHQCHRVAHAHRQLLVGRAFKATSPNGRFADGARAIDGKPLSRIEVGARRPEHAARQLDSGAARYRGGAVADAATRASDACSVHGKNLFYFF-------------------GERQGGQEGNALAD--VVHIHFGMSGAFRTMPAAQEAQKPPRETTRLRLEHPGDGLVAHLSAMTVAHGGMELYHEKSSKLGPDPLREDADPELLWAKVQKCKKPIGLVLMDQTMMAGVGNIYRAEVLYKAAIHPEQPANTLSRDAFDTVWAHSVELLQRGFTSGSILTVDPEDAKILGKPWTRRYIYNHAQCGRCKGPVKSWDMANRT 301
BLAST of EWM22053.1 vs. NCBI_GenBank
Match: gi|1001613449|gb|KXS17204.1| (H2TH-domain-containing protein [Gonapodya prolifera JEL478]) HSP 1 Score: 296.59 bits (758), Expect = 4.284e-93 Identity = 151/283 (53.36%), Postives = 186/283 (65.72%), Query Frame = 0 Query: 43 MVEGHGCHRVVAAHRRLLLGHVFQATSPNGRFLEGAKLIDGKRLARVEAVGKNLFYFWTPAAILPGTPPPPVVKRGTGKRKPIEIATSSEETVVMHVHFGMSGAFSVSPFPGKV-ATPTTRLFLVNKERNLTASLSAMTCVHGGLELFEGKLEALGPDPLREDADKERLWGKMQATSKAIGQILMDQSCVAGIGNIYRAEILFKSGVHPEQPANTVAHAAFETLWMHSVLLLQRGFTSGSILTVDPSEASRLGPPWTRRYIYNHSHCGRCGSRIQNWSMAGRT 324 MVEGH HRV A HR+LLLG F A+SPNGRF + A+ I G+ L RVEA GKNLFYF+ TP P + V+H+HFGMSG ++ P V A P+ RL L+N +L +SA GG E ++ + LG DPLR+DAD ER+W KMQAT K IG +LMDQS +AGIGNIYRAEILFKS +HP QP++TV F+++W HSV LQRGF +GSILTVD +A+RLGPPWTRRY+YNHS CG+CG+ I +W M GRT Sbjct: 1 MVEGHQVHRVAAHHRKLLLGKSFVASSPNGRFSDAAR-ISGRPLTRVEAHGKNLFYFFK-------TPSP--------------------DPFVVHIHFGMSGRWTELPSSSSVPALPSHRLELLNTTEDLLLRVSAQVLDAGGEEFYDRWRQKLGEDPLRDDADVERVWTKMQATKKPIGLVLMDQSVIAGIGNIYRAEILFKSRLHPNQPSHTVPRDTFDSVWRHSVECLQRGFQTGSILTVDKEDAARLGPPWTRRYVYNHSKCGKCGTGISSWEMGGRT 255
BLAST of EWM22053.1 vs. NCBI_GenBank
Match: gi|971519574|dbj|GAQ78620.1| (putative DNA glycosylase [Klebsormidium nitens]) HSP 1 Score: 293.123 bits (749), Expect = 1.979e-91 Identity = 149/297 (50.17%), Postives = 185/297 (62.29%), Query Frame = 0 Query: 43 MVEGHGCHRVVAAHRRLLLGHVFQATSPNGRFLEGAKLIDGKRLARVEAVGKNLFYFWTPAAILPGTPPPPVVKRGTGKRKPIEIATSSEETVVMHVHFGMSGAFSVSPFPGKVATPTTRLFLVNKERNLTASLSAMTCVHGGLELFEGKLEALGPDPLREDADKERLWGKMQATSKAIGQILMDQSCVAGIGNIYRAEILFKSGVHPEQPANTVAHAAFETLWMHSVLLLQRGFTSGSILTVDPSEASRLGPPWT------RRYIYNHSHCGRCGSRIQNWSMAGRTATQEQTAAP 333 MVEG G HRV AH++ LLG F+A+SPNGRF EGA I G+ LAR+EA GKNLFYF+T +E VV+H+HFGMSG FS P TTRL LVN+E + A LSAM C +G E ++ KL LGPDPLR+DADKE +W KMQA+ IG +MDQS +AGIGNIYRAEILF +G+HPEQP+ TV+ AFE +W SV LL G +G I+T+DP E + G P RRY+YNH+ C RCGS+I++W +A RT +T P Sbjct: 1 MVEGPGVHRVAIAHKKALLGKKFEASSPNGRFAEGAAAITGRNLARIEAHGKNLFYFFT---------------------------ADGQEPVVVHIHFGMSGRFSAHKLPSPEPRETTRLQLVNREAKIGAHLSAMFCNYGPPEFYDQKLALLGPDPLRDDADKEVVWKKMQASKSPIGTFVMDQSKIAGIGNIYRAEILFLAGIHPEQPSKTVSRDAFERMWEESVRLLHIGVQTGRIVTMDPVELGKPGTPMAALRGGDRRYVYNHASCRRCGSQIRSWVVATRTLYACETCQP 270
BLAST of EWM22053.1 vs. NCBI_GenBank
Match: gi|303286994|ref|XP_003062786.1| (formamidopyrimidine-dna glycosylase [Micromonas pusilla CCMP1545] >gi|226455422|gb|EEH52725.1| formamidopyrimidine-dna glycosylase [Micromonas pusilla CCMP1545]) HSP 1 Score: 290.812 bits (743), Expect = 6.151e-91 Identity = 154/283 (54.42%), Postives = 179/283 (63.25%), Query Frame = 0 Query: 43 MVEGHGCHRVVAAHRRLLLGHVFQATSPNGRFLEGAKLIDGKRLARVEAVGKNLFYFWTPAAILPGTPPPPVVKRGTGKRKPIEIATSSEETVVMHVHFGMSGAFSV-SPFPGKVATPTTRLFLVNKERNLTASLSAMTCVHGGLELFEGKLEALGPDPLREDADKERLWGKMQATSKAIGQILMDQSCVAGIGNIYRAEILFKSGVHPEQPANTVAHAAFETLWMHSVLLLQRGFTSGSILTVDPSEASRLGPPWTRRYIYNHSHCGRCGSRIQNWSMAGRT 324 MVEGHG HRV AHRR L+G F+A+SPNGRF++GA+ ID K LARVEA+GKNLFYF+ + VMHVHFGMSG FSV + ATPTTRL L R A LSAM FE K ALG DPLREDA + LW K A+ K++G LMDQS AG+GNIYRAEILFK+GVHPEQP + F++LW HSV LLQRG+++GSILTVDP EA LG PWTRRY+YN S CGRCG ++ W MA RT Sbjct: 1 MVEGHGVHRVAQAHRRALVGKKFKASSPNGRFVDGARAIDDKALARVEAIGKNLFYFFDRGEGG------------------RGGGSERHGHHVMHVHFGMSGRFSVHAASDPPAATPTTRLKLEGHGR--VAMLSAMVVDLMDESGFEAKRVALGQDPLREDACADTLWEKFTASRKSVGLALMDQSMFAGVGNIYRAEILFKAGVHPEQPCRDLDRGVFDSLWRHSVELLQRGYSTGSILTVDPEEALVLGEPWTRRYVYNQSSCGRCGGKVLTWEMANRT 263
BLAST of EWM22053.1 vs. NCBI_GenBank
Match: gi|1004148112|gb|KXZ56085.1| (hypothetical protein GPECTOR_2g967 [Gonium pectorale]) HSP 1 Score: 299.671 bits (766), Expect = 9.043e-88 Identity = 156/274 (56.93%), Postives = 182/274 (66.42%), Query Frame = 0 Query: 43 MVEGHGCHRVVAAHRRLLLGHVFQATSPNGRFLEGAKLIDGKRLARVEAVGKNLFYFWTPAAILPGTPPPPVVKRGTGKRKPIEIATSSEETVV-----MHVHFGMSGAFSVSPFPGKVATPTTRLFLVNKERNLTASLSAMTCVHGGLELFEGKLEALGPDPLREDADKERLWGKMQATSKAIGQILMDQSCVAGIGNIYRAEILFKSGVHPEQPANTVAHAAFETLWMHSVLLLQRGFTSGSILTVDPSEASRLGPPWTRRYIYNHSHCGRC 311 MVEGH CHRV AAHR+LLLG FQA SPNGRF EGA I K L R+E GKNLFYF+ + PG G G A ++ MH+HFGMSGAF + PG TPTTRL L N+E L A LSAMT +G L L+ + LGPDPLREDADKE LW ++ K IG +LMDQS +AG+GNIYRAEILFKSGVHPE PA+ ++ F+ +W HSV LL+RGF +GSI+TVDP EA+RLG PWTRRYIYN CGRC Sbjct: 1 MVEGHQCHRVAAAHRKLLLGRAFQARSPNGRFAEGAAAIHLKPLQRIEVHGKNLFYFFGGGGLGPGGGGAGGAGGGGGAASTSAAAVAAAAAAAPSPVVMHIHFGMSGAFRTTSLPGPEPTPTTRLELRNQEMGLVAHLSAMTVAYGSLALYNERAAKLGPDPLREDADKEALWSRLPRCKKPIGLVLMDQSMMAGVGNIYRAEILFKSGVHPETPASAISREQFDRIWYHSVDLLRRGFQAGSIVTVDPEEANRLGRPWTRRYIYNQRTCGRC 274
BLAST of EWM22053.1 vs. NCBI_GenBank
Match: gi|545357824|ref|XP_005644513.1| (H2TH-domain-containing protein [Coccomyxa subellipsoidea C-169] >gi|384246479|gb|EIE19969.1| H2TH-domain-containing protein [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 264.618 bits (675), Expect = 4.151e-84 Identity = 143/260 (55.00%), Postives = 165/260 (63.46%), Query Frame = 0 Query: 43 MVEGHGCHRVVAAHRRLLLGHVFQATSPNGRFLEGAKLIDGKRLARVEAVGKNLFYFWTPAAILPGTPPPPVVKRGTGKRKPIEIATSSEETVVMHVHFGMSGAFSVSPFPGK--VATPTTRLFLVNKERNLTASLSAMTCVHGGLELFEGKLEALGPDPLREDADKERLWGKMQATSKAIGQILMDQSCVAGIGNIYRAEILFKSGVHPEQPANTVAHAAFETLWMHSVLLLQRGFTSGSILTVDPSEASRLGPPWTRR 300 MVEGH CHRVV AH+++LLG F+A SPNG+F EGA+ I+ + LAR+E GKNLFYF+ A ETVV+H HFGMSGAF P G TP TRL L ++ + A LSAM KL LGPDPLREDAD+ERLW MQ + K+IGQ+LMDQS VAGIGNIYRAEILFK+GVHPE+P V+ FE +W HSV LLQRGF SGSILTVD EA LGPPW RR Sbjct: 1 MVEGHQCHRVVHAHKKVLLGQRFKAESPNGKFTEGARAINQQPLARIECHGKNLFYFFGDGA----------------------------ETVVLHAHFGMSGAFKTLPRGGTPPETTPNTRLLLTGEK--VVALLSAMI----------EKLAKLGPDPLREDADRERLWEVMQKSKKSIGQLLMDQSAVAGIGNIYRAEILFKAGVHPEEPGRLVSREGFELIWRHSVDLLQRGFKSGSILTVDADEAKVLGPPWQRR 220
BLAST of EWM22053.1 vs. NCBI_GenBank
Match: gi|676388507|ref|XP_009037532.1| (hypothetical protein AURANDRAFT_14007, partial [Aureococcus anophagefferens] >gi|323451651|gb|EGB07527.1| hypothetical protein AURANDRAFT_14007, partial [Aureococcus anophagefferens]) HSP 1 Score: 258.455 bits (659), Expect = 3.713e-81 Identity = 137/293 (46.76%), Postives = 179/293 (61.09%), Query Frame = 0 Query: 43 MVEGHGCHRVVAAHRRLLLGHVFQATSPNGRFLEGAKLIDGKRLARVEAVGKNLFYFWTPAAILPGTPPPPVVKRGTGKRKPIEIATSSEETVVMHVHFGMSGAFSVSPFPGK-VATPTTRLFLVNKERNLTASLSAMTCVHGGLE-LFEGKLEALGPDPLREDADKERLWGKMQATSKAIGQILMDQSCVAGIGNIYRAEILFKSGVHPEQPANTVAHAAFETLWMHSVLLLQRGFTSGSILTVDPSEASRLGPPWTRRYIYNHSHCGRCGSRIQNWSMAGRTATQEQTAAP 333 MVEGH HRV HR L+G F+A+SPN RF EGA LIDGK A +EAVGKNLF ++ A + V +HVHFGM+G ++V + T TTRL L + + LSAMT HG + L+ K LG DPLR+DAD ERLWGK+ A+ K+IG ++MDQSC G GNIYRAEILFK+GVHP++P N+++ F+ +W H+V LL+RG+ +GSILTVD + + G RRYIYN + C +CGSR+ +W +A RTA +T P Sbjct: 1 MVEGHSVHRVATRHRSKLVGKTFRASSPNARFAEGAALIDGKEFAGIEAVGKNLFAWFGSGA----------------------------DEVCVHVHFGMAGNWAVFDAADEPETTATTRLRLAG--HGVVSHLSAMTVAHGTRDGLYAEKRRKLGEDPLRDDADPERLWGKVAASKKSIGALVMDQSCFTGPGNIYRAEILFKAGVHPDRPGNSLSRDEFDLIWHHTVELLKRGYATGSILTVDKEDERKYGQ--IRRYIYNKAKCPKCGSRVVSWDIAARTAYACETCQP 261 The following BLAST results are available for this feature:
BLAST of EWM22053.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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