EWM22052.1, cds8614 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22052.1 vs. NCBI_GenBank
Match: gi|585102467|gb|EWM22052.1| (plasma membrane intrinsic protein [Nannochloropsis gaditana]) HSP 1 Score: 662.914 bits (1709), Expect = 0.000e+0 Identity = 325/325 (100.00%), Postives = 325/325 (100.00%), Query Frame = 0
Query: 1 MVAATRQSAPPGFMVPVDIEPSSPGAQRFEANPPGFMATLPTHTLNTLNDYKEYFITEMKHPTFAQSVIAEWWATTLFLFFLILSCLPGANDGQEVFRIGIVAGLTIAILVYAFYAVSGGNINPAVSLGLALSGRMTAPRACFYIAAQIVGAITGTAMAKAVSPRAFDLGKGGMNALQTLDVDLESIAITEGQAFFAEVMGSMLLVLAVLFCTDTARSIEHPHMTALIPLEIGFVVLLAHVAMIPIDGCGINPARSIGSAAIYGSLVHLWIFVWGPVVGACFAALIYRLIFAPTEVFNEYFKPENVMARASKGLRTLSGQDRGSN 325
MVAATRQSAPPGFMVPVDIEPSSPGAQRFEANPPGFMATLPTHTLNTLNDYKEYFITEMKHPTFAQSVIAEWWATTLFLFFLILSCLPGANDGQEVFRIGIVAGLTIAILVYAFYAVSGGNINPAVSLGLALSGRMTAPRACFYIAAQIVGAITGTAMAKAVSPRAFDLGKGGMNALQTLDVDLESIAITEGQAFFAEVMGSMLLVLAVLFCTDTARSIEHPHMTALIPLEIGFVVLLAHVAMIPIDGCGINPARSIGSAAIYGSLVHLWIFVWGPVVGACFAALIYRLIFAPTEVFNEYFKPENVMARASKGLRTLSGQDRGSN
Sbjct: 1 MVAATRQSAPPGFMVPVDIEPSSPGAQRFEANPPGFMATLPTHTLNTLNDYKEYFITEMKHPTFAQSVIAEWWATTLFLFFLILSCLPGANDGQEVFRIGIVAGLTIAILVYAFYAVSGGNINPAVSLGLALSGRMTAPRACFYIAAQIVGAITGTAMAKAVSPRAFDLGKGGMNALQTLDVDLESIAITEGQAFFAEVMGSMLLVLAVLFCTDTARSIEHPHMTALIPLEIGFVVLLAHVAMIPIDGCGINPARSIGSAAIYGSLVHLWIFVWGPVVGACFAALIYRLIFAPTEVFNEYFKPENVMARASKGLRTLSGQDRGSN 325
BLAST of EWM22052.1 vs. NCBI_GenBank
Match: gi|527188033|gb|EPS60284.1| (plasma membrane intrinsic protein, partial [Genlisea aurea]) HSP 1 Score: 158.688 bits (400), Expect = 6.817e-43 Identity = 102/269 (37.92%), Postives = 145/269 (53.90%), Query Frame = 0
Query: 36 FMATLPTHTLNTLNDYKE------YFITEMKHPTFAQSVIAEWWATTLFLFFLILSCLPGANDGQEVFRIGIVA-----GLTIAILVYAFYAVSGGNINPAVSLGLALSGRMTAPRACFYIAAQIVGAITGTAMAKAVSPRAFDLGKGGMNALQTLDVDLESIAITEGQAFFAEVMGSMLLVLAVLFCTDTARSIEHPHMTALIPLEIGFVVLLAHVAMIPIDGCGINPARSIGSAAIYG---SLVHLWIFVWGPVVGACFAALIYRLI 290
F P T DYKE + E+K +F ++ IAE+ AT LFL+ IL+ + + + +GI G I LVY+ +SGG+INPAV+ GL L+ +++ RA FYI AQI+GA G + K P + GG N + + A T+GQ AE++G+ +LV V TD RS H+ L PL IGF V L H+A IPI G GINPARS+G+A ++ + W++ GP+VGA AAL +++I
Sbjct: 15 FSERQPLGTSAQTKDYKEPPPAPLFEPGELKSWSFWRAGIAEFVATFLFLYITILTVVGVSKSKSKCGTVGIQGIAWAFGGAIFALVYSTAGISGGHINPAVTFGLFLARKLSLTRAVFYIVAQILGATAGAGVVKGFGPTLYQSVGGGANQINS--------AFTKGQGLGAEIIGTFVLVYVVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIVFNRPQAWDDHWVYWVGPLVGAGLAALYHQVI 275
BLAST of EWM22052.1 vs. NCBI_GenBank
Match: gi|1117310541|ref|XP_019434980.1| (PREDICTED: aquaporin PIP1-3 [Lupinus angustifolius] >gi|1102689476|gb|OIV89254.1| hypothetical protein TanjilG_24189 [Lupinus angustifolius]) HSP 1 Score: 157.532 bits (397), Expect = 1.922e-42 Identity = 103/280 (36.79%), Postives = 147/280 (52.50%), Query Frame = 0
Query: 25 GAQRFEANPPGFMATLPTHTLNTLNDYKE------YFITEMKHPTFAQSVIAEWWATTLFLFFLILSCLPGANDGQEVFRIGIVA-----GLTIAILVYAFYAVSGGNINPAVSLGLALSGRMTAPRACFYIAAQIVGAITGTAMAKAVSPRAFDLGKGGMNALQTLDVDLESIAITEGQAFFAEVMGSMLLVLAVLFCTDTARSIEHPHMTALIPLEIGFVVLLAHVAMIPIDGCGINPARSIGSAAIYG---SLVHLWIFVWGPVVGACFAALIYRLI 290
GA ++ P A T +T DYKE + E+ +F ++ IAE+ AT LFL+ +L+ + A + +G+ G I LVY +SGG+INPAV+ GL L+ +++ RA FYI Q +GAI G + K P ++ GG NAL S ++G AE++G+ +LV V TD R+ H+ L PL IGF V L H+A IPI G GINPARS+G+A IY + WIF GP +GA AAL ++++
Sbjct: 11 GANKYREEQPIGTAV---QTQDTNKDYKEPPSAPFFEPGELSSWSFYRAGIAEFVATFLFLYITVLTVMGVAKSSNKCSTVGVQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYIIMQCLGAICGAGVVKGFQPHQYERLGGGANAL--------SKGYSKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHIPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWVGPFIGAALAALYHQIV 279
BLAST of EWM22052.1 vs. NCBI_GenBank
Match: gi|658309874|ref|NP_001280950.1| (aquaporin PIP1-1 [Malus domestica] >gi|544206069|gb|AGW15994.1| plasma membrane intrinsic protein 1 [Malus domestica]) HSP 1 Score: 157.147 bits (396), Expect = 2.330e-42 Identity = 105/281 (37.37%), Postives = 150/281 (53.38%), Query Frame = 0
Query: 25 GAQRF-EANPPGFMATLPTHTLNTLNDYKE------YFITEMKHPTFAQSVIAEWWATTLFLFFLILSCLPGANDGQEVFRIGIVA-----GLTIAILVYAFYAVSGGNINPAVSLGLALSGRMTAPRACFYIAAQIVGAITGTAMAKAVSPRAFDLGKGGMNALQTLDVDLESIAITEGQAFFAEVMGSMLLVLAVLFCTDTARSIEHPHMTALIPLEIGFVVLLAHVAMIPIDGCGINPARSIGSAAIYG---SLVHLWIFVWGPVVGACFAALIYRLI 290
GA +F E P G A T DYKE + E+K +F ++ IAE+ AT LFL+ +L+ + + + +G+ G TI LVY VSGG+INPAV+ GL L+ +++ R+ FYI Q +GA+ G + K P+ ++L GG NA+ T+G AE++G+ +LV V TD R+ H+ L PL IGF V L H+A IPI G GINPARS+G+A IY + WIF GP +GA AAL ++++
Sbjct: 11 GANKFPERQPIGTSA-------QTDKDYKEPPPAPLFEPGELKSWSFWRAGIAEFMATFLFLYITVLTVMGVSRAPNKCASVGVQGIAWAFGGTIFALVYCTAGVSGGHINPAVTFGLFLARKLSLTRSVFYIIMQSLGAMAGAGVVKGFQPKQYELLGGGANAVNH--------GYTKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKGHAWDDHWIFWVGPFIGAALAALYHQIV 276
BLAST of EWM22052.1 vs. NCBI_GenBank
Match: gi|1162524468|ref|XP_020412285.1| (aquaporin PIP1-2 [Prunus persica]) HSP 1 Score: 155.992 bits (393), Expect = 7.594e-42 Identity = 105/281 (37.37%), Postives = 148/281 (52.67%), Query Frame = 0
Query: 25 GAQRF-EANPPGFMATLPTHTLNTLNDYKE------YFITEMKHPTFAQSVIAEWWATTLFLFFLILSCLPGANDGQEVFRIGIVA-----GLTIAILVYAFYAVSGGNINPAVSLGLALSGRMTAPRACFYIAAQIVGAITGTAMAKAVSPRAFDLGKGGMNALQTLDVDLESIAITEGQAFFAEVMGSMLLVLAVLFCTDTARSIEHPHMTALIPLEIGFVVLLAHVAMIPIDGCGINPARSIGSAAIYG---SLVHLWIFVWGPVVGACFAALIYRLI 290
GA +F E P G A T DYKE + E+K +F ++ IAE+ AT LFL+ +L+ + + + +GI G +I LVY+ +SGG+INPAV+ GL L+ +++ RA FYI Q +GAI G + K ++L GG N + T+G AE++G+ +LV V TD R+ H+ L PL IGF V L H+A IPI G GINPARS+G+A IY + WIF GP +GA AAL +++I
Sbjct: 11 GANKFSERQPIGTSA-------QTDKDYKEPPPAPLFEPGELKSWSFWRAGIAEFIATFLFLYITVLTVMGVSRSRSKCSTVGIQGIAWAFGGSIFALVYSTAGISGGHINPAVTFGLFLARKLSLTRAVFYIVMQTLGAIAGAGVVKGFQKNQYELLGGGANVVNH--------GYTKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRAWDDHWIFWVGPFIGAALAALYHQII 276
BLAST of EWM22052.1 vs. NCBI_GenBank
Match: gi|793420885|ref|NP_001292619.1| (probable aquaporin PIP1-4 [Cucumis sativus] >gi|562745002|gb|AHB33474.1| plasma intrinsic protein 1-1 [Cucumis sativus]) HSP 1 Score: 155.992 bits (393), Expect = 8.592e-42 Identity = 106/285 (37.19%), Postives = 149/285 (52.28%), Query Frame = 0
Query: 25 GAQRF-EANPPGFMATLPTHTLNTLNDYKE------YFITEMKHPTFAQSVIAEWWATTLFLFFLILSCL----PGANDGQEVFRIGIVA-----GLTIAILVYAFYAVSGGNINPAVSLGLALSGRMTAPRACFYIAAQIVGAITGTAMAKAVSPRAFDLGKGGMNALQTLDVDLESIAITEGQAFFAEVMGSMLLVLAVLFCTDTARSIEHPHMTALIPLEIGFVVLLAHVAMIPIDGCGINPARSIGSAAIYG---SLVHLWIFVWGPVVGACFAALIYRLI 290
GA RF E P G A + + DYKE + E+ +F ++ IAE++AT LFL+ +L+ + DG +GI G I LVY +SGG+INPAV+ GL L+ +++ RA FYI Q +GAI G + K P+ ++ GG N + S T+G AE++G+ +LV V TD RS H+ L PL IGF V L H+A IPI G GINPARS+G+A I+ + WIF GP +GA AAL ++++
Sbjct: 11 GANRFNERQPIGTAA----QSQDDAKDYKEPPPAPLFEPEELTSWSFYRAGIAEFFATFLFLYITVLTVMGVTRSKEADGNTCNTVGIQGIARAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIVMQCLGAICGAGVVKGFQPKPYERLGGGANVV--------SDGYTKGDGLGAEIVGTFILVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDKAWDDHWIFWVGPFIGAALAALYHQVV 283
BLAST of EWM22052.1 vs. NCBI_GenBank
Match: gi|294461444|gb|ADE76283.1| (unknown [Picea sitchensis]) HSP 1 Score: 155.221 bits (391), Expect = 9.533e-42 Identity = 96/253 (37.94%), Postives = 138/253 (54.55%), Query Frame = 0
Query: 50 DYKEYFITEMKHPTFAQSVIAEWWATTLFLFFLILSCLPGANDGQEVFRIGIVA-----GLTIAILVYAFYAVSGGNINPAVSLGLALSGRMTAPRACFYIAAQIVGAITGTAMAKAVSPRAFDLGKGGMNALQTLDVDLESIAITEGQAFFAEVMGSMLLVLAVLFCTDTARSIEHPHMTALIPLEIGFVVLLAHVAMIPIDGCGINPARSIGSAAIYG---SLVHLWIFVWGPVVGACFAALIYRLIFAPT 294
D E+++ +F +++IAE+ AT LFL+ I + + AN + +G + G I +LVY VSGG+INPAV+ GL ++ +MT RA FYI AQ +GA+ G M KA+ + G GG N ++ ++A AE+ G+ +LV V TD + H+ AL PL +GF V + H+A IPI G GINPARS G+A IYG S WIF GP++GA AA ++ + T
Sbjct: 22 DRNEFYLW-----SFYRAIIAEFVATLLFLYVTIATVIGNANQKKPCGGVGTLGIAWSFGGMIFVLVYCTAGVSGGHINPAVTFGLFVARKMTLNRAVFYIVAQCLGAVCGAGMVKALQKNYYSAGGGGANTVKEGYASETALA--------AEIAGTFVLVYTVFCATDPKSNARDSHVPALAPLSVGFAVFMVHLATIPITGTGINPARSFGAAVIYGHKKSWNDHWIFWVGPLIGATIAAAFHKYVIRAT 261
BLAST of EWM22052.1 vs. NCBI_GenBank
Match: gi|700195462|gb|KGN50639.1| (hypothetical protein Csa_5G199270 [Cucumis sativus]) HSP 1 Score: 155.606 bits (392), Expect = 1.063e-41 Identity = 106/285 (37.19%), Postives = 149/285 (52.28%), Query Frame = 0
Query: 25 GAQRF-EANPPGFMATLPTHTLNTLNDYKE------YFITEMKHPTFAQSVIAEWWATTLFLFFLILSCL----PGANDGQEVFRIGIVA-----GLTIAILVYAFYAVSGGNINPAVSLGLALSGRMTAPRACFYIAAQIVGAITGTAMAKAVSPRAFDLGKGGMNALQTLDVDLESIAITEGQAFFAEVMGSMLLVLAVLFCTDTARSIEHPHMTALIPLEIGFVVLLAHVAMIPIDGCGINPARSIGSAAIYG---SLVHLWIFVWGPVVGACFAALIYRLI 290
GA RF E P G A + + DYKE + E+ +F ++ IAE++AT LFL+ +L+ + DG +GI G I LVY +SGG+INPAV+ GL L+ +++ RA FYI Q +GAI G + K P+ ++ GG N + S T+G AE++G+ +LV V TD RS H+ L PL IGF V L H+A IPI G GINPARS+G+A I+ + WIF GP +GA AAL ++++
Sbjct: 11 GANRFTERQPIGTAA----QSQDDAKDYKEPPPAPLFEPEELTSWSFYRAGIAEFFATFLFLYITVLTVMGVTRSKEADGNTCNTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAIFYIVMQCLGAICGAGVVKGFQPKPYERLGGGANVV--------SDGYTKGDGLGAEIVGTFILVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDKAWDDHWIFWVGPFIGAALAALYHQVV 283
BLAST of EWM22052.1 vs. NCBI_GenBank
Match: gi|645254113|ref|XP_008232887.1| (PREDICTED: aquaporin PIP1-2-like [Prunus mume]) HSP 1 Score: 155.606 bits (392), Expect = 1.226e-41 Identity = 104/281 (37.01%), Postives = 148/281 (52.67%), Query Frame = 0
Query: 25 GAQRF-EANPPGFMATLPTHTLNTLNDYKE------YFITEMKHPTFAQSVIAEWWATTLFLFFLILSCLPGANDGQEVFRIGIVA-----GLTIAILVYAFYAVSGGNINPAVSLGLALSGRMTAPRACFYIAAQIVGAITGTAMAKAVSPRAFDLGKGGMNALQTLDVDLESIAITEGQAFFAEVMGSMLLVLAVLFCTDTARSIEHPHMTALIPLEIGFVVLLAHVAMIPIDGCGINPARSIGSAAIYG---SLVHLWIFVWGPVVGACFAALIYRLI 290
GA +F E P G A T DYKE + E+K +F ++ IAE+ AT LFL+ +L+ + + + +GI G +I LVY+ +SGG+INPAV+ GL L+ +++ RA FYI Q +GAI G + K ++L GG N + T+G AE++G+ +LV V TD R+ H+ L PL IGF V L H+A IPI G GINPARS+G+A IY + WIF GP +GA AAL ++++
Sbjct: 11 GANKFSERQPIGTSA-------QTDKDYKEPPPAPLFEPGELKSWSFWRAGIAEFIATFLFLYITVLTVMGVSRSRSKCSTVGIQGIAWAFGGSIFALVYSTAGISGGHINPAVTFGLFLARKLSLTRAVFYIVMQTLGAIVGAGVVKGFQKNQYELLGGGANVVNH--------GYTKGDGLGAEIVGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDRAWNDHWIFWVGPFIGAALAALYHQIV 276
BLAST of EWM22052.1 vs. NCBI_GenBank
Match: gi|766543142|emb|CDX10336.1| (aquaporin [Coffea arabica]) HSP 1 Score: 155.221 bits (391), Expect = 1.328e-41 Identity = 105/277 (37.91%), Postives = 143/277 (51.62%), Query Frame = 0
Query: 28 RFEANPPGFMATLPTHTLNTLNDYKE------YFITEMKHPTFAQSVIAEWWATTLFLFFLILSCLPGANDGQEVFRIGIVA-----GLTIAILVYAFYAVSGGNINPAVSLGLALSGRMTAPRACFYIAAQIVGAITGTAMAKAVSPRAFDLGKGGMNALQTLDVDLESIAITEGQAFFAEVMGSMLLVLAVLFCTDTARSIEHPHMTALIPLEIGFVVLLAHVAMIPIDGCGINPARSIGSAAIYG---SLVHLWIFVWGPVVGACFAALIYRLI 290
R AN F P T DYKE + E++ +F ++ IAE+ AT LFL+ IL+ + A + +G+ G I LVY VSGG+INPAV+ GL L+ +++ RA FYI Q +GAI G + K P ++ GG N S T+G AE++G+ +LV V TD R+ H+ L PL IGF V L H+A IPI G GINPARS+G+A IY + WIF GP VGA AAL ++++
Sbjct: 9 RLGANK--FSERQPLGTSAQTKDYKEAPPAPLFEPGELQSWSFWRAGIAEFMATFLFLYITILTVMGVARSNNKCASVGLQGIAWSFGGMIFALVYCTAGVSGGHINPAVTFGLFLARKLSLTRAIFYIVMQCLGAICGAGVVKGFQPSLYESKNGGAN--------FVSHGYTKGDGLGAEIVGTFILVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRDHAWDGHWIFWVGPFVGAALAALYHQVV 275 The following BLAST results are available for this feature:
BLAST of EWM22052.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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