EWM22066.1, cds8608 (CDS) Nannochloropsis gaditana

Overview
NameEWM22066.1
Unique Namecds8608
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:477763..478439 +
Alignment locationKK037249.1:478595..478676 +
Alignment locationKK037249.1:478848..479015 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22066.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100244g8.1331.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:477763..478439 +
KK037249.1supercontigKK037249.1:478595..478676 +
KK037249.1supercontigKK037249.1:478848..479015 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM22066.1 vs. NCBI_GenBank
Match: gi|585102482|gb|EWM22066.1| (hypothetical protein Naga_100244g8 [Nannochloropsis gaditana])

HSP 1 Score: 623.624 bits (1607), Expect = 0.000e+0
Identity = 308/308 (100.00%), Postives = 308/308 (100.00%), Query Frame = 0
Query:    1 MTKYPDREWRFSQEDWLKASRLTAGGVTFLLTLSASQFLQGRLLGISAASRAATLAGMLSVSTGSMLASWAADEAPATLSVALGWVPEKDRRRKGGVIDKRGTISSSTFSLLGYDAGKKKERLLGAARTALVGMLLFKGLGGRFSGVAPSNVAQPGAFFNVRGTLPAGLEYASPKQKRRLDMFGWVYGCHTCGRRQMGDYVGDHMPPRKVAVEMSRRWWRRLLGIRVKQRFTPQCRPCSSIQSAAVRSDRRILVYHYLSLRRYHATGAVLEVVSLLPGHGMLDGLIHQNVGRVSTWWRRKGRAEGDWQ 308
            MTKYPDREWRFSQEDWLKASRLTAGGVTFLLTLSASQFLQGRLLGISAASRAATLAGMLSVSTGSMLASWAADEAPATLSVALGWVPEKDRRRKGGVIDKRGTISSSTFSLLGYDAGKKKERLLGAARTALVGMLLFKGLGGRFSGVAPSNVAQPGAFFNVRGTLPAGLEYASPKQKRRLDMFGWVYGCHTCGRRQMGDYVGDHMPPRKVAVEMSRRWWRRLLGIRVKQRFTPQCRPCSSIQSAAVRSDRRILVYHYLSLRRYHATGAVLEVVSLLPGHGMLDGLIHQNVGRVSTWWRRKGRAEGDWQ
Sbjct:    1 MTKYPDREWRFSQEDWLKASRLTAGGVTFLLTLSASQFLQGRLLGISAASRAATLAGMLSVSTGSMLASWAADEAPATLSVALGWVPEKDRRRKGGVIDKRGTISSSTFSLLGYDAGKKKERLLGAARTALVGMLLFKGLGGRFSGVAPSNVAQPGAFFNVRGTLPAGLEYASPKQKRRLDMFGWVYGCHTCGRRQMGDYVGDHMPPRKVAVEMSRRWWRRLLGIRVKQRFTPQCRPCSSIQSAAVRSDRRILVYHYLSLRRYHATGAVLEVVSLLPGHGMLDGLIHQNVGRVSTWWRRKGRAEGDWQ 308          
BLAST of EWM22066.1 vs. NCBI_GenBank
Match: gi|553186096|ref|XP_005854359.1| (hypothetical protein NGA_0168800 [Nannochloropsis gaditana CCMP526] >gi|422294699|gb|EKU21999.1| hypothetical protein NGA_0168800 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 340.502 bits (872), Expect = 4.632e-116
Identity = 168/169 (99.41%), Postives = 168/169 (99.41%), Query Frame = 0
Query:   58 MLSVSTGSMLASWAADEAPATLSVALGWVPEKDRRRKGGVIDKRGTISSSTFSLLGYDAGKKKERLLGAARTALVGMLLFKGLGGRFSGVAPSNVAQPGAFFNVRGTLPAGLEYASPKQKRRLDMFGWVYGCHTCGRRQMGDYVGDHMPPRKVAVEMSRRWWRRLLGIR 226
            MLSVSTGSMLAS AADEAPATLSVALGWVPEKDRRRKGGVIDKRGTISSSTFSLLGYDAGKKKERLLGAARTALVGMLLFKGLGGRFSGVAPSNVAQPGAFFNVRGTLPAGLEYASPKQKRRLDMFGWVYGCHTCGRRQMGDYVGDHMPPRKVAVEMSRRWWRRLLGIR
Sbjct:    1 MLSVSTGSMLASLAADEAPATLSVALGWVPEKDRRRKGGVIDKRGTISSSTFSLLGYDAGKKKERLLGAARTALVGMLLFKGLGGRFSGVAPSNVAQPGAFFNVRGTLPAGLEYASPKQKRRLDMFGWVYGCHTCGRRQMGDYVGDHMPPRKVAVEMSRRWWRRLLGIR 169          
BLAST of EWM22066.1 vs. NCBI_GenBank
Match: gi|298713153|emb|CBJ26909.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 144.436 bits (363), Expect = 2.253e-37
Identity = 69/136 (50.74%), Postives = 89/136 (65.44%), Query Frame = 0
Query:  133 GMLLFKGLGGRFSGVAPSNVAQPGAFFNVRGTLPAGLEYASPKQKRRLDMFGWVYGCHTCGRRQMGDYVGDHMPPRKVAVEMSRRWWRRLLGIRVKQRFTPQCRPCSSIQSAAVRSDRRILVYHYL--SLRRYHAT 266
            G++LF+ LGGRFS VAPS +  PGAF  +  +LPA LEYAS  +++ L   G  +GCHTCG R    ++ DHMPP K     + + WRR L   V QRF PQC+ CS++QSAAVRS +  L YH+   +LR YHAT
Sbjct:  148 GLVLFRALGGRFSSVAPSALHMPGAFSRLSASLPATLEYASDGKRQALATLGKNFGCHTCGTRAPATFIADHMPPLKTVKLANAKLWRRALRQTVSQRFYPQCQACSTLQSAAVRSGQTTLRYHFTLAALRPYHAT 283          
BLAST of EWM22066.1 vs. NCBI_GenBank
Match: gi|301096021|ref|XP_002897109.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262107428|gb|EEY65480.1| conserved hypothetical protein [Phytophthora infestans T30-4])

HSP 1 Score: 126.331 bits (316), Expect = 2.457e-30
Identity = 62/136 (45.59%), Postives = 83/136 (61.03%), Query Frame = 0
Query:  132 VGMLLFKGLGGRFSGVAPSNVAQPGAFFNVRGTLPAGLEYASPKQKRRLDMFGWVYGCHTCGRRQMGDYVGDHMPPRKVAVEMSRRWWRRLLGIRVKQRFTPQCRPCSSIQSAAVRSDRRILVYHYLSLRRYHATG 267
            +G+L FK LGGR S +APS  A  GAF   + +LPA +EYA+  ++  +  FG ++GCHTCG ++   Y  DHMPP+ VA     +  RRLLG +   RF PQC PCS+ Q   V+  +  L  H +S R YHATG
Sbjct:  147 MGLLCFKLLGGRMSSLAPSPFANLGAFHLKKASLPATIEYATSVERGIIREFGRLFGCHTCGVKRGVRYHADHMPPKLVAKHTDEQLVRRLLGRKTTFRFYPQCEPCSNQQGTVVKQWKSTLKLHLVSFRAYHATG 282          
BLAST of EWM22066.1 vs. NCBI_GenBank
Match: gi|953503843|emb|CEG35409.1| (hypothetical protein PHALS_09531 [Plasmopara halstedii])

HSP 1 Score: 127.102 bits (318), Expect = 2.972e-30
Identity = 60/136 (44.12%), Postives = 82/136 (60.29%), Query Frame = 0
Query:  132 VGMLLFKGLGGRFSGVAPSNVAQPGAFFNVRGTLPAGLEYASPKQKRRLDMFGWVYGCHTCGRRQMGDYVGDHMPPRKVAVEMSRRWWRRLLGIRVKQRFTPQCRPCSSIQSAAVRSDRRILVYHYLSLRRYHATG 267
            +G+L FK LGGR S +APS  A  GAF   + +LPA +EYA+  ++  +  FG +YGCHTCG +Q   Y  DHMPP+ +      +++R+ LG +   RF PQC  CS+ Q   V+  +  L  H LS R YHATG
Sbjct:  147 MGVLCFKILGGRMSALAPSPFANLGAFHLKKASLPATVEYATSVERGIIQEFGRLYGCHTCGVKQGVRYHADHMPPKLLGSRTDNQFFRKFLGQKTTFRFYPQCESCSNQQGNVVKQLKSTLKMHLLSFRAYHATG 282          
BLAST of EWM22066.1 vs. NCBI_GenBank
Match: gi|566033920|gb|ETI56831.1| (hypothetical protein F443_00769 [Phytophthora parasitica P1569] >gi|567971604|gb|ETK96609.1| hypothetical protein L915_00715 [Phytophthora parasitica] >gi|567999942|gb|ETL49972.1| hypothetical protein L916_00709 [Phytophthora parasitica] >gi|568029114|gb|ETM03045.1| hypothetical protein L917_00672 [Phytophthora parasitica] >gi|570337617|gb|ETO85565.1| hypothetical protein F444_00770 [Phytophthora parasitica P1976] >gi|570961634|gb|ETP26613.1| hypothetical protein F441_00757 [Phytophthora parasitica CJ01A1] >gi|570998379|gb|ETP54609.1| hypothetical protein F442_00717 [Phytophthora parasitica P10297])

HSP 1 Score: 126.716 bits (317), Expect = 4.162e-30
Identity = 61/136 (44.85%), Postives = 83/136 (61.03%), Query Frame = 0
Query:  132 VGMLLFKGLGGRFSGVAPSNVAQPGAFFNVRGTLPAGLEYASPKQKRRLDMFGWVYGCHTCGRRQMGDYVGDHMPPRKVAVEMSRRWWRRLLGIRVKQRFTPQCRPCSSIQSAAVRSDRRILVYHYLSLRRYHATG 267
            +G++ FK LGGR S +APS     GAF   + +LPA +EYA+  ++  +  FG ++GCHTCG ++   Y  DHMPP+ VA     +  R+LLG +   RF PQC PCS+ Q A V+  +  L  H LS R YHATG
Sbjct:  147 MGLMCFKLLGGRMSALAPSPFVNLGAFHLKKASLPATVEYATSVERGIIQEFGRLFGCHTCGVKRGVRYHADHMPPKLVAKRTDEQLLRKLLGRKTTFRFYPQCEPCSNQQGAVVKQWKSTLKMHLLSFRAYHATG 282          
BLAST of EWM22066.1 vs. NCBI_GenBank
Match: gi|675162869|ref|XP_008890319.1| (hypothetical protein PPTG_00648 [Phytophthora parasitica INRA-310] >gi|568059722|gb|ETM56292.1| hypothetical protein L914_00702 [Phytophthora parasitica] >gi|568109625|gb|ETN24232.1| hypothetical protein PPTG_00648 [Phytophthora parasitica INRA-310])

HSP 1 Score: 126.716 bits (317), Expect = 4.520e-30
Identity = 61/136 (44.85%), Postives = 83/136 (61.03%), Query Frame = 0
Query:  132 VGMLLFKGLGGRFSGVAPSNVAQPGAFFNVRGTLPAGLEYASPKQKRRLDMFGWVYGCHTCGRRQMGDYVGDHMPPRKVAVEMSRRWWRRLLGIRVKQRFTPQCRPCSSIQSAAVRSDRRILVYHYLSLRRYHATG 267
            +G++ FK LGGR S +APS     GAF   + +LPA +EYA+  ++  +  FG ++GCHTCG ++   Y  DHMPP+ VA     +  R+LLG +   RF PQC PCS+ Q A V+  +  L  H LS R YHATG
Sbjct:  147 MGLMCFKLLGGRMSALAPSPFVNLGAFHLKKASLPATVEYATSVERGIIQEFGRLFGCHTCGVKRGVRYHADHMPPKLVAKRTDEQLLRKLLGRKTTFRFYPQCEPCSNQQGAVVKQWKSTLKMHLLSFRAYHATG 282          
BLAST of EWM22066.1 vs. NCBI_GenBank
Match: gi|1214696781|gb|OWZ10215.1| (hypothetical protein PHMEG_00016968 [Phytophthora megakarya])

HSP 1 Score: 124.79 bits (312), Expect = 2.661e-29
Identity = 86/250 (34.40%), Postives = 129/250 (51.60%), Query Frame = 0
Query:   25 GGVTFLLTLSASQFLQGRLLGISAASR--AATLAGMLSVSTGSMLASWAADEAPATLSVALGWVPEKDRRRKG---GVIDKRGTISSSTFSLLGYDAGKKKERLLGAARTA--LVGMLLFKGLGGRFSGVAPSNVAQPGAFFNVRGTLPAGLEYASPKQKRRLDMFGWVYGCHTCGRRQMGDYVGDHMPPRKVAVEMSRRWWRRLLGIRVKQRFTPQCRPCSSIQSAAVRSDRRILVYHYLSLRRYHATG 267
            GG  FL  +S +Q +Q +LL I +AS        G  +V++ S+LA   A   P  +   L     +   ++G    V+  R     + + L      ++ E L  A      ++G+L ++ LGGR S +APS  A  GAF   + +LPA  EYA+  ++  +  FG +YGCHTCG +Q   Y  DHMPP+ VA     ++ R++LG +   RF PQC  CS+ Q + V+  +  L  H LS R YH+TG
Sbjct:   41 GGALFLGGVSTAQVVQ-KLLRIGSASSFLLPQALGAAAVASSSVLALHFAS-IPREIYQELAMQSRQANEQRGWSWLVLGARNLQPPTAWKLAQNKVQERWEDLPEAPYPVYMVMGLLCYRLLGGRMSALAPSPFANLGAFHLKKASLPATAEYATSVERGIIQEFGRLYGCHTCGVKQGVRYHADHMPPKLVAKRTDEQFLRKILGRKTPFRFYPQCESCSNQQGSVVKQWKSTLKMHLLSFRAYHSTG 288          
BLAST of EWM22066.1 vs. NCBI_GenBank
Match: gi|401413872|ref|XP_003886383.1| (conserved hypothetical protein [Neospora caninum Liverpool] >gi|325120803|emb|CBZ56358.1| conserved hypothetical protein [Neospora caninum Liverpool] >gi|820695379|tpe|CEL71118.1| TPA: hypothetical protein BN1204_067820 [Neospora caninum Liverpool])

HSP 1 Score: 125.176 bits (313), Expect = 1.279e-28
Identity = 96/295 (32.54%), Postives = 141/295 (47.80%), Query Frame = 0
Query:   23 TAGGVTFLLTLSASQFLQGRLLGISAASRAATLAGMLSVSTGSMLASWAADEAPATLSVAL---GWVPEKDRRRKGGVIDKRGTISSSTFSLLGYDAGKKK---------------ER--------LLGAARTALVGMLLFKGLGGRFSGVAPSNVAQPGAFFNVRGTLPAGLEYASPKQKRRLDMFGWVYGCHTCG-RRQMGDYVGDHMPPRKVAVEMSRRWWRRLLGI---------RVKQRFTPQCRPCSSIQSAAVRS---DRRILVYHYLSLRRYHATGAVLEVVSLLPG 278
             AG         AS  L  + LGIS AS++  + G+ +V     +AS  A  A AT+  A    G  P +D+     V   R  ++   F+     +GK +               ER        L    +  L+G  +F  LGGRF  ++PS +  PGAF     +L AG++YAS +++R +   G  +GCHTCG RR + +++ DH PP++V V  S+ W     G+          + QRF PQCR CSS Q++ VR     RR LV +Y S+R YH TG V+ ++    G
Sbjct:  256 CAGSAAAFWCTCASSVLLQKSLGISCASKSCKIFGITTV----FVASNVAAAAAATIRCAFQLCGVTPPRDQLNFASV--GRAAVAKLGFTADALASGKNEVSAAVLPSPSLRNGSERFKEWSDYMLKVGLKEGLLGSTIFWLLGGRFFRLSPSCLLAPGAFHQSHLSLRAGIDYASVEERRFIKKLGETFGCHTCGKRRNVEEWIADHQPPKRVVVMFSQTWLGHFYGMFSRAMGGTRYLPQRFYPQCRDCSSKQASVVRKPKLSRRDLVVNYWSVRPYHFTGGVVHLLRFFAG 544          
BLAST of EWM22066.1 vs. NCBI_GenBank
Match: gi|673017390|ref|XP_008862656.1| (hypothetical protein H310_01353 [Aphanomyces invadans] >gi|574481859|gb|ETW08851.1| hypothetical protein H310_01353 [Aphanomyces invadans])

HSP 1 Score: 121.324 bits (303), Expect = 2.435e-28
Identity = 68/150 (45.33%), Postives = 87/150 (58.00%), Query Frame = 0
Query:  140 LGGRFSGVAPSNVAQPGAFFNVRGTLPAGLEYASPKQKRRLDMFGWVYGCHTCGRRQMGDYVGDHMPPRKVAVEMSRRWWRRLLGIRVKQRFTPQCRPCSSIQSAAVRSDRRILVYHYLSLRRYHATGAVLEVVSLLPGHGMLDGLIHQN 289
            LGGRF  +APS+   PGAF + + +LPA LEYA    +  +  FG +YGCHTCG R    +  DH PP  VA   + R W RL+   V QR+ PQC  CS+IQ A VR + + L  H  +LR YHATG  +    +L G G L G I Q+
Sbjct:  129 LGGRFRALAPSDFRHPGAFGHAKISLPATLEYADGNVRAVIQSFGRLYGCHTCGVR-TAKFHADHQPPVMVAKAENERLWNRLIAGPVVQRYYPQCDGCSNIQGAQVRKNAQKLKLHLQALRAYHATGFWM----VLFGAGGLGGYIAQS 273          
The following BLAST results are available for this feature:
BLAST of EWM22066.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102482|gb|EWM22066.1|0.000e+0100.00hypothetical protein Naga_100244g8 [Nannochloropsi... [more]
gi|553186096|ref|XP_005854359.1|4.632e-11699.41hypothetical protein NGA_0168800 [Nannochloropsis ... [more]
gi|298713153|emb|CBJ26909.1|2.253e-3750.74conserved unknown protein [Ectocarpus siliculosus][more]
gi|301096021|ref|XP_002897109.1|2.457e-3045.59conserved hypothetical protein [Phytophthora infes... [more]
gi|953503843|emb|CEG35409.1|2.972e-3044.12hypothetical protein PHALS_09531 [Plasmopara halst... [more]
gi|566033920|gb|ETI56831.1|4.162e-3044.85hypothetical protein F443_00769 [Phytophthora para... [more]
gi|675162869|ref|XP_008890319.1|4.520e-3044.85hypothetical protein PPTG_00648 [Phytophthora para... [more]
gi|1214696781|gb|OWZ10215.1|2.661e-2934.40hypothetical protein PHMEG_00016968 [Phytophthora ... [more]
gi|401413872|ref|XP_003886383.1|1.279e-2832.54conserved hypothetical protein [Neospora caninum L... [more]
gi|673017390|ref|XP_008862656.1|2.435e-2845.33hypothetical protein H310_01353 [Aphanomyces invad... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8635rna8635Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications