EWM22066.1, cds8608 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM22066.1 vs. NCBI_GenBank
Match: gi|585102482|gb|EWM22066.1| (hypothetical protein Naga_100244g8 [Nannochloropsis gaditana]) HSP 1 Score: 623.624 bits (1607), Expect = 0.000e+0 Identity = 308/308 (100.00%), Postives = 308/308 (100.00%), Query Frame = 0 Query: 1 MTKYPDREWRFSQEDWLKASRLTAGGVTFLLTLSASQFLQGRLLGISAASRAATLAGMLSVSTGSMLASWAADEAPATLSVALGWVPEKDRRRKGGVIDKRGTISSSTFSLLGYDAGKKKERLLGAARTALVGMLLFKGLGGRFSGVAPSNVAQPGAFFNVRGTLPAGLEYASPKQKRRLDMFGWVYGCHTCGRRQMGDYVGDHMPPRKVAVEMSRRWWRRLLGIRVKQRFTPQCRPCSSIQSAAVRSDRRILVYHYLSLRRYHATGAVLEVVSLLPGHGMLDGLIHQNVGRVSTWWRRKGRAEGDWQ 308 MTKYPDREWRFSQEDWLKASRLTAGGVTFLLTLSASQFLQGRLLGISAASRAATLAGMLSVSTGSMLASWAADEAPATLSVALGWVPEKDRRRKGGVIDKRGTISSSTFSLLGYDAGKKKERLLGAARTALVGMLLFKGLGGRFSGVAPSNVAQPGAFFNVRGTLPAGLEYASPKQKRRLDMFGWVYGCHTCGRRQMGDYVGDHMPPRKVAVEMSRRWWRRLLGIRVKQRFTPQCRPCSSIQSAAVRSDRRILVYHYLSLRRYHATGAVLEVVSLLPGHGMLDGLIHQNVGRVSTWWRRKGRAEGDWQ Sbjct: 1 MTKYPDREWRFSQEDWLKASRLTAGGVTFLLTLSASQFLQGRLLGISAASRAATLAGMLSVSTGSMLASWAADEAPATLSVALGWVPEKDRRRKGGVIDKRGTISSSTFSLLGYDAGKKKERLLGAARTALVGMLLFKGLGGRFSGVAPSNVAQPGAFFNVRGTLPAGLEYASPKQKRRLDMFGWVYGCHTCGRRQMGDYVGDHMPPRKVAVEMSRRWWRRLLGIRVKQRFTPQCRPCSSIQSAAVRSDRRILVYHYLSLRRYHATGAVLEVVSLLPGHGMLDGLIHQNVGRVSTWWRRKGRAEGDWQ 308
BLAST of EWM22066.1 vs. NCBI_GenBank
Match: gi|553186096|ref|XP_005854359.1| (hypothetical protein NGA_0168800 [Nannochloropsis gaditana CCMP526] >gi|422294699|gb|EKU21999.1| hypothetical protein NGA_0168800 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 340.502 bits (872), Expect = 4.632e-116 Identity = 168/169 (99.41%), Postives = 168/169 (99.41%), Query Frame = 0 Query: 58 MLSVSTGSMLASWAADEAPATLSVALGWVPEKDRRRKGGVIDKRGTISSSTFSLLGYDAGKKKERLLGAARTALVGMLLFKGLGGRFSGVAPSNVAQPGAFFNVRGTLPAGLEYASPKQKRRLDMFGWVYGCHTCGRRQMGDYVGDHMPPRKVAVEMSRRWWRRLLGIR 226 MLSVSTGSMLAS AADEAPATLSVALGWVPEKDRRRKGGVIDKRGTISSSTFSLLGYDAGKKKERLLGAARTALVGMLLFKGLGGRFSGVAPSNVAQPGAFFNVRGTLPAGLEYASPKQKRRLDMFGWVYGCHTCGRRQMGDYVGDHMPPRKVAVEMSRRWWRRLLGIR Sbjct: 1 MLSVSTGSMLASLAADEAPATLSVALGWVPEKDRRRKGGVIDKRGTISSSTFSLLGYDAGKKKERLLGAARTALVGMLLFKGLGGRFSGVAPSNVAQPGAFFNVRGTLPAGLEYASPKQKRRLDMFGWVYGCHTCGRRQMGDYVGDHMPPRKVAVEMSRRWWRRLLGIR 169
BLAST of EWM22066.1 vs. NCBI_GenBank
Match: gi|298713153|emb|CBJ26909.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 144.436 bits (363), Expect = 2.253e-37 Identity = 69/136 (50.74%), Postives = 89/136 (65.44%), Query Frame = 0 Query: 133 GMLLFKGLGGRFSGVAPSNVAQPGAFFNVRGTLPAGLEYASPKQKRRLDMFGWVYGCHTCGRRQMGDYVGDHMPPRKVAVEMSRRWWRRLLGIRVKQRFTPQCRPCSSIQSAAVRSDRRILVYHYL--SLRRYHAT 266 G++LF+ LGGRFS VAPS + PGAF + +LPA LEYAS +++ L G +GCHTCG R ++ DHMPP K + + WRR L V QRF PQC+ CS++QSAAVRS + L YH+ +LR YHAT Sbjct: 148 GLVLFRALGGRFSSVAPSALHMPGAFSRLSASLPATLEYASDGKRQALATLGKNFGCHTCGTRAPATFIADHMPPLKTVKLANAKLWRRALRQTVSQRFYPQCQACSTLQSAAVRSGQTTLRYHFTLAALRPYHAT 283
BLAST of EWM22066.1 vs. NCBI_GenBank
Match: gi|301096021|ref|XP_002897109.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262107428|gb|EEY65480.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 126.331 bits (316), Expect = 2.457e-30 Identity = 62/136 (45.59%), Postives = 83/136 (61.03%), Query Frame = 0 Query: 132 VGMLLFKGLGGRFSGVAPSNVAQPGAFFNVRGTLPAGLEYASPKQKRRLDMFGWVYGCHTCGRRQMGDYVGDHMPPRKVAVEMSRRWWRRLLGIRVKQRFTPQCRPCSSIQSAAVRSDRRILVYHYLSLRRYHATG 267 +G+L FK LGGR S +APS A GAF + +LPA +EYA+ ++ + FG ++GCHTCG ++ Y DHMPP+ VA + RRLLG + RF PQC PCS+ Q V+ + L H +S R YHATG Sbjct: 147 MGLLCFKLLGGRMSSLAPSPFANLGAFHLKKASLPATIEYATSVERGIIREFGRLFGCHTCGVKRGVRYHADHMPPKLVAKHTDEQLVRRLLGRKTTFRFYPQCEPCSNQQGTVVKQWKSTLKLHLVSFRAYHATG 282
BLAST of EWM22066.1 vs. NCBI_GenBank
Match: gi|953503843|emb|CEG35409.1| (hypothetical protein PHALS_09531 [Plasmopara halstedii]) HSP 1 Score: 127.102 bits (318), Expect = 2.972e-30 Identity = 60/136 (44.12%), Postives = 82/136 (60.29%), Query Frame = 0 Query: 132 VGMLLFKGLGGRFSGVAPSNVAQPGAFFNVRGTLPAGLEYASPKQKRRLDMFGWVYGCHTCGRRQMGDYVGDHMPPRKVAVEMSRRWWRRLLGIRVKQRFTPQCRPCSSIQSAAVRSDRRILVYHYLSLRRYHATG 267 +G+L FK LGGR S +APS A GAF + +LPA +EYA+ ++ + FG +YGCHTCG +Q Y DHMPP+ + +++R+ LG + RF PQC CS+ Q V+ + L H LS R YHATG Sbjct: 147 MGVLCFKILGGRMSALAPSPFANLGAFHLKKASLPATVEYATSVERGIIQEFGRLYGCHTCGVKQGVRYHADHMPPKLLGSRTDNQFFRKFLGQKTTFRFYPQCESCSNQQGNVVKQLKSTLKMHLLSFRAYHATG 282
BLAST of EWM22066.1 vs. NCBI_GenBank
Match: gi|566033920|gb|ETI56831.1| (hypothetical protein F443_00769 [Phytophthora parasitica P1569] >gi|567971604|gb|ETK96609.1| hypothetical protein L915_00715 [Phytophthora parasitica] >gi|567999942|gb|ETL49972.1| hypothetical protein L916_00709 [Phytophthora parasitica] >gi|568029114|gb|ETM03045.1| hypothetical protein L917_00672 [Phytophthora parasitica] >gi|570337617|gb|ETO85565.1| hypothetical protein F444_00770 [Phytophthora parasitica P1976] >gi|570961634|gb|ETP26613.1| hypothetical protein F441_00757 [Phytophthora parasitica CJ01A1] >gi|570998379|gb|ETP54609.1| hypothetical protein F442_00717 [Phytophthora parasitica P10297]) HSP 1 Score: 126.716 bits (317), Expect = 4.162e-30 Identity = 61/136 (44.85%), Postives = 83/136 (61.03%), Query Frame = 0 Query: 132 VGMLLFKGLGGRFSGVAPSNVAQPGAFFNVRGTLPAGLEYASPKQKRRLDMFGWVYGCHTCGRRQMGDYVGDHMPPRKVAVEMSRRWWRRLLGIRVKQRFTPQCRPCSSIQSAAVRSDRRILVYHYLSLRRYHATG 267 +G++ FK LGGR S +APS GAF + +LPA +EYA+ ++ + FG ++GCHTCG ++ Y DHMPP+ VA + R+LLG + RF PQC PCS+ Q A V+ + L H LS R YHATG Sbjct: 147 MGLMCFKLLGGRMSALAPSPFVNLGAFHLKKASLPATVEYATSVERGIIQEFGRLFGCHTCGVKRGVRYHADHMPPKLVAKRTDEQLLRKLLGRKTTFRFYPQCEPCSNQQGAVVKQWKSTLKMHLLSFRAYHATG 282
BLAST of EWM22066.1 vs. NCBI_GenBank
Match: gi|675162869|ref|XP_008890319.1| (hypothetical protein PPTG_00648 [Phytophthora parasitica INRA-310] >gi|568059722|gb|ETM56292.1| hypothetical protein L914_00702 [Phytophthora parasitica] >gi|568109625|gb|ETN24232.1| hypothetical protein PPTG_00648 [Phytophthora parasitica INRA-310]) HSP 1 Score: 126.716 bits (317), Expect = 4.520e-30 Identity = 61/136 (44.85%), Postives = 83/136 (61.03%), Query Frame = 0 Query: 132 VGMLLFKGLGGRFSGVAPSNVAQPGAFFNVRGTLPAGLEYASPKQKRRLDMFGWVYGCHTCGRRQMGDYVGDHMPPRKVAVEMSRRWWRRLLGIRVKQRFTPQCRPCSSIQSAAVRSDRRILVYHYLSLRRYHATG 267 +G++ FK LGGR S +APS GAF + +LPA +EYA+ ++ + FG ++GCHTCG ++ Y DHMPP+ VA + R+LLG + RF PQC PCS+ Q A V+ + L H LS R YHATG Sbjct: 147 MGLMCFKLLGGRMSALAPSPFVNLGAFHLKKASLPATVEYATSVERGIIQEFGRLFGCHTCGVKRGVRYHADHMPPKLVAKRTDEQLLRKLLGRKTTFRFYPQCEPCSNQQGAVVKQWKSTLKMHLLSFRAYHATG 282
BLAST of EWM22066.1 vs. NCBI_GenBank
Match: gi|1214696781|gb|OWZ10215.1| (hypothetical protein PHMEG_00016968 [Phytophthora megakarya]) HSP 1 Score: 124.79 bits (312), Expect = 2.661e-29 Identity = 86/250 (34.40%), Postives = 129/250 (51.60%), Query Frame = 0 Query: 25 GGVTFLLTLSASQFLQGRLLGISAASR--AATLAGMLSVSTGSMLASWAADEAPATLSVALGWVPEKDRRRKG---GVIDKRGTISSSTFSLLGYDAGKKKERLLGAARTA--LVGMLLFKGLGGRFSGVAPSNVAQPGAFFNVRGTLPAGLEYASPKQKRRLDMFGWVYGCHTCGRRQMGDYVGDHMPPRKVAVEMSRRWWRRLLGIRVKQRFTPQCRPCSSIQSAAVRSDRRILVYHYLSLRRYHATG 267 GG FL +S +Q +Q +LL I +AS G +V++ S+LA A P + L + ++G V+ R + + L ++ E L A ++G+L ++ LGGR S +APS A GAF + +LPA EYA+ ++ + FG +YGCHTCG +Q Y DHMPP+ VA ++ R++LG + RF PQC CS+ Q + V+ + L H LS R YH+TG Sbjct: 41 GGALFLGGVSTAQVVQ-KLLRIGSASSFLLPQALGAAAVASSSVLALHFAS-IPREIYQELAMQSRQANEQRGWSWLVLGARNLQPPTAWKLAQNKVQERWEDLPEAPYPVYMVMGLLCYRLLGGRMSALAPSPFANLGAFHLKKASLPATAEYATSVERGIIQEFGRLYGCHTCGVKQGVRYHADHMPPKLVAKRTDEQFLRKILGRKTPFRFYPQCESCSNQQGSVVKQWKSTLKMHLLSFRAYHSTG 288
BLAST of EWM22066.1 vs. NCBI_GenBank
Match: gi|401413872|ref|XP_003886383.1| (conserved hypothetical protein [Neospora caninum Liverpool] >gi|325120803|emb|CBZ56358.1| conserved hypothetical protein [Neospora caninum Liverpool] >gi|820695379|tpe|CEL71118.1| TPA: hypothetical protein BN1204_067820 [Neospora caninum Liverpool]) HSP 1 Score: 125.176 bits (313), Expect = 1.279e-28 Identity = 96/295 (32.54%), Postives = 141/295 (47.80%), Query Frame = 0 Query: 23 TAGGVTFLLTLSASQFLQGRLLGISAASRAATLAGMLSVSTGSMLASWAADEAPATLSVAL---GWVPEKDRRRKGGVIDKRGTISSSTFSLLGYDAGKKK---------------ER--------LLGAARTALVGMLLFKGLGGRFSGVAPSNVAQPGAFFNVRGTLPAGLEYASPKQKRRLDMFGWVYGCHTCG-RRQMGDYVGDHMPPRKVAVEMSRRWWRRLLGI---------RVKQRFTPQCRPCSSIQSAAVRS---DRRILVYHYLSLRRYHATGAVLEVVSLLPG 278 AG AS L + LGIS AS++ + G+ +V +AS A A AT+ A G P +D+ V R ++ F+ +GK + ER L + L+G +F LGGRF ++PS + PGAF +L AG++YAS +++R + G +GCHTCG RR + +++ DH PP++V V S+ W G+ + QRF PQCR CSS Q++ VR RR LV +Y S+R YH TG V+ ++ G Sbjct: 256 CAGSAAAFWCTCASSVLLQKSLGISCASKSCKIFGITTV----FVASNVAAAAAATIRCAFQLCGVTPPRDQLNFASV--GRAAVAKLGFTADALASGKNEVSAAVLPSPSLRNGSERFKEWSDYMLKVGLKEGLLGSTIFWLLGGRFFRLSPSCLLAPGAFHQSHLSLRAGIDYASVEERRFIKKLGETFGCHTCGKRRNVEEWIADHQPPKRVVVMFSQTWLGHFYGMFSRAMGGTRYLPQRFYPQCRDCSSKQASVVRKPKLSRRDLVVNYWSVRPYHFTGGVVHLLRFFAG 544
BLAST of EWM22066.1 vs. NCBI_GenBank
Match: gi|673017390|ref|XP_008862656.1| (hypothetical protein H310_01353 [Aphanomyces invadans] >gi|574481859|gb|ETW08851.1| hypothetical protein H310_01353 [Aphanomyces invadans]) HSP 1 Score: 121.324 bits (303), Expect = 2.435e-28 Identity = 68/150 (45.33%), Postives = 87/150 (58.00%), Query Frame = 0 Query: 140 LGGRFSGVAPSNVAQPGAFFNVRGTLPAGLEYASPKQKRRLDMFGWVYGCHTCGRRQMGDYVGDHMPPRKVAVEMSRRWWRRLLGIRVKQRFTPQCRPCSSIQSAAVRSDRRILVYHYLSLRRYHATGAVLEVVSLLPGHGMLDGLIHQN 289 LGGRF +APS+ PGAF + + +LPA LEYA + + FG +YGCHTCG R + DH PP VA + R W RL+ V QR+ PQC CS+IQ A VR + + L H +LR YHATG + +L G G L G I Q+ Sbjct: 129 LGGRFRALAPSDFRHPGAFGHAKISLPATLEYADGNVRAVIQSFGRLYGCHTCGVR-TAKFHADHQPPVMVAKAENERLWNRLIAGPVVQRYYPQCDGCSNIQGAQVRKNAQKLKLHLQALRAYHATGFWM----VLFGAGGLGGYIAQS 273 The following BLAST results are available for this feature:
BLAST of EWM22066.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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