EWM22071.1, cds8605 (CDS) Nannochloropsis gaditana

Overview
NameEWM22071.1
Unique Namecds8605
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:471297..471485 +
Alignment locationKK037249.1:471546..471665 +
Alignment locationKK037249.1:471730..472467 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22071.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100244g5.1336.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:471297..471485 +
KK037249.1supercontigKK037249.1:471546..471665 +
KK037249.1supercontigKK037249.1:471730..472467 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM22071.1 vs. NCBI_GenBank
Match: gi|585102487|gb|EWM22071.1| (hypothetical protein Naga_100244g5 [Nannochloropsis gaditana])

HSP 1 Score: 712.22 bits (1837), Expect = 0.000e+0
Identity = 348/348 (100.00%), Postives = 348/348 (100.00%), Query Frame = 0
Query:    1 MFSPSFKSRSCSRPYAIVKALPARLSQAMKIIYSMAALLLAAAPARAGLSLSVRLPEIKCSLATHMHELSFLIVSGASVKRTDVHHLLSVIKPASMLSTVVCFNLPVTLQVTATDTTVKDLSTLNLEGAVETLLADDVVVGGTYNYNAAVAKPEEVYIKKAFDVKLGDLALDARYRLPTQVAALTATLRRNADYIRAAFNTDSVVERVEGSKRFSLPGERQLALTPAWDQSTRAFELTVAQDIQAGKTNAVLELSQADKDGKLTLNHQVDDANTISPTLSLKRGYLTYQWTHLLGDGAKLQTTLDPFTDLDVTWSDPGKGGEWVTRANIPLKEPRTATLSFKRKFTFQ 348
            MFSPSFKSRSCSRPYAIVKALPARLSQAMKIIYSMAALLLAAAPARAGLSLSVRLPEIKCSLATHMHELSFLIVSGASVKRTDVHHLLSVIKPASMLSTVVCFNLPVTLQVTATDTTVKDLSTLNLEGAVETLLADDVVVGGTYNYNAAVAKPEEVYIKKAFDVKLGDLALDARYRLPTQVAALTATLRRNADYIRAAFNTDSVVERVEGSKRFSLPGERQLALTPAWDQSTRAFELTVAQDIQAGKTNAVLELSQADKDGKLTLNHQVDDANTISPTLSLKRGYLTYQWTHLLGDGAKLQTTLDPFTDLDVTWSDPGKGGEWVTRANIPLKEPRTATLSFKRKFTFQ
Sbjct:    1 MFSPSFKSRSCSRPYAIVKALPARLSQAMKIIYSMAALLLAAAPARAGLSLSVRLPEIKCSLATHMHELSFLIVSGASVKRTDVHHLLSVIKPASMLSTVVCFNLPVTLQVTATDTTVKDLSTLNLEGAVETLLADDVVVGGTYNYNAAVAKPEEVYIKKAFDVKLGDLALDARYRLPTQVAALTATLRRNADYIRAAFNTDSVVERVEGSKRFSLPGERQLALTPAWDQSTRAFELTVAQDIQAGKTNAVLELSQADKDGKLTLNHQVDDANTISPTLSLKRGYLTYQWTHLLGDGAKLQTTLDPFTDLDVTWSDPGKGGEWVTRANIPLKEPRTATLSFKRKFTFQ 348          
BLAST of EWM22071.1 vs. NCBI_GenBank
Match: gi|676379321|ref|XP_009032939.1| (hypothetical protein AURANDRAFT_70645 [Aureococcus anophagefferens] >gi|323455948|gb|EGB11815.1| hypothetical protein AURANDRAFT_70645 [Aureococcus anophagefferens])

HSP 1 Score: 103.99 bits (258), Expect = 1.329e-20
Identity = 73/247 (29.55%), Postives = 122/247 (49.39%), Query Frame = 0
Query:  110 QVTATDTTVKDLSTLNLEGAVETLLADDVVVGGTYNYNAAVAKPEEVYIK-KAFDVKLGD-LALDARYRLPTQVAALTATLRRNADYIRAAFNT--DSVVERVEGSKRFSLPGERQLALTPAWD----QSTRAFELTVAQDIQAGKTNAVLELSQAD---KD---GKLTLNHQVDDANTISPTLSLKRGYLTYQWTHLLGDGAKLQTTLDPFTDLDVTWSDPGKGGEWVTRANIPLKEPRTATLSFK 342
            QV   DT V  +   NLEG VET ++D +  G TY  N+A   P+ ++ +  A   K GD L + A Y + +  A +     ++     A F++   +++   E S+ FS+ G R L + PA++     S+    L ++ D     T+  L+L   D   +D   G L+++H ++  N+I PT +L  G  TY++T  L   A+L    +P   +++ W D G  G W T   +P  +P  A++S K
Sbjct: 1367 QVNIKDTAVSSIEAANLEGEVETQISDQISAGATYEQNSAKFSPKTLFTRWTANTAKGGDPLEVTATYNVASNTAEVDVEYEKSGSTFTANFDSARKALITAAEVSRDFSVEG-RNLNVAPAYNFVSGVSSVTSNLALSDD-----TSVELKLDSDDVGNRDALTGTLSIDHNINGKNSIKPTFALNSGSATYEYTRKLDGDAELSVAANPGKSIEIEWDDAGSKGLWTTNVKMPWGKPVGASVSVK 1607          

HSP 2 Score: 88.1965 bits (217), Expect = 2.094e-15
Identity = 67/252 (26.59%), Postives = 117/252 (46.43%), Query Frame = 0
Query:  103 FNLPVTLQVTATDTTVKDLSTLNLEGAVETLLADDVVVGGTYNYNAAVAKPEEVYIKKAFDVKLGD-LALDARYRLPTQVAALTATLRRNADYIRAAFNTD--SVVERVEGSKRFSLPGERQLALTPAWD------QSTRAFELTVAQDIQAGKTNAVLELSQADKDGKLTLNHQVDDANTISPTLSLKRGYLTYQWTHLLGDGAKLQTTLDPFTDLDVTWSDPGKGGEWVTRANIPLKEPRTATLSFKRKF 345
            +  PV   V+  +  +  +  +N EG +ET ++D +  G TY+ N A  KP+ ++ +  +  K GD L + A   +    A +     +      A FN+    ++   + S+ F++ G R+L L P+ D        T    L+ A  ++A K N+ L  S A   G L+++H +D   +I  + +L  G   +++   L   AKL     P   ++V W + G    W T   +P  +   A++SFKRKF
Sbjct: 1596 WGKPVGASVSVKEAALLSIDAMNFEGEIETRVSDQIAAGATYDQNGAKFKPKTLFTR--WTAKGGDPLKVTAIINVADNAAEVDVAYEKFGSKFSANFNSACAQLITTADASRDFTVDG-RKLKLAPSHDFASGVSSVTSNLALSPATTVEA-KLNSNLGNSDA-PTGTLSIDHTIDSIYSIKHSFALDSGAARHEFRRKLEGDAKLSVAASPGHSVEVEWDETGSKSLWTTNVRMPWGQYDRASVSFKRKF 1842          
BLAST of EWM22071.1 vs. NCBI_GenBank
Match: gi|299471754|emb|CBN76975.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 83.5741 bits (205), Expect = 1.119e-14
Identity = 68/246 (27.64%), Postives = 114/246 (46.34%), Query Frame = 0
Query:  108 TLQVTATDTTVKD-LSTLNLEGAVETLLADDVVVGGTYNYNAAVAKPEEVYIKKAFDVKLGD---LALDARYRLPTQVAALTATLRRNADYIRAAFNT-DSVVERVEGSKRFSLPGERQLALTPAWDQSTRAFELTVAQDIQAGKTNAVLELSQADKDGKLTLNHQVDDANTISPTLSLKRGYLTYQWTHLLGDGAKLQTTLDPFTDLDVTWSDPGKGGEWVTRANIPL-KEPRTATLSFKRKFTF 347
            T  +  +D ++ D + +LNLEG  +  + D+V  G  Y +N     P  +++    D  LGD     L A   + ++ A +   +    D +   F+T DS +  +  +K   L G R++ + P  D   +  E+ VA ++    T+A L ++ A+    L + H++DD N ISP + LK G +  +    LGD   ++ T       +V W      G WV + N+PL     T  +SFKR  T 
Sbjct:   55 TFTIDVSDHSLSDGVGSLNLEGRFQREVVDNVDCGVVYKFNECRGMPTSLWVSTTQD--LGDDMTANLRADMDIDSKNAVIDCRVNSGRDSVAVDFDTADSTMGPLRITKHLDLNG-RKVIVQPTVDVQGKTGEVVVAAELDGDVTSAELTVNHAEDSAVLEVCHRLDDNNVISPKVDLKTGDIAVRLNRSLGDARAVKFTAQR---ENVDWE--YLEGAWVVKGNVPLTSNGATGAISFKRSITL 292          
BLAST of EWM22071.1 vs. NCBI_GenBank
Match: gi|1210521623|dbj|GAX19613.1| (hypothetical protein FisN_19Hh193 [Fistulifera solaris])

HSP 1 Score: 80.8777 bits (198), Expect = 1.255e-13
Identity = 62/222 (27.93%), Postives = 100/222 (45.05%), Query Frame = 0
Query:  141 GGTYNYNAAVAKPEEVYIKKAFDVK-LGDLALDARYRLPTQVAALTATLRRNADYIRAAFNTDS--VVERVEGSKRFSLP--GERQLALTPAWDQSTRAFELTVAQDIQA-----GKTNAVLELSQADKDGKLTLNHQVDDANTISPTLSLKRGYLTYQWTHLLGDGAKLQTTLDPFTDLDVTWSDPG-KGGEWVTRANIPLKEPRT----ATLSFKRKFTF 347
            G  YNYN     P  V +K  F +  +  L +   +   +    L     R   YI    +     ++E +  S  F LP      L L+P+ D         ++  I+A     G+T A+L L    KD  L++ + + D+N I+P + LK   + YQW+    +GA L T +DP   +D+ W+D    GG+W+T   +PL+   T    A +  +R+F F
Sbjct:   96 GIGYNYNDLKRLPSRVDVKGKFSLGPINQLEVQPVFDFRSGQKDLLLQFTRGPSYIFGKLSNQRRRLIETINASALFYLPFASLSTLRLSPSVDFRQTLLRDKISCIIEAVTGGAGRTKAILNLRA--KDPTLSMVYALSDSNIIAPEIHLKDARVLYQWSVKWNNGAMLHTKVDPSHSIDINWTDQSTAGGKWITDIRLPLEGTSTRGLAAEVKVRRQFIF 315          
BLAST of EWM22071.1 vs. NCBI_GenBank
Match: gi|1210531756|dbj|GAX09723.1| (hypothetical protein FisN_19Lh193 [Fistulifera solaris])

HSP 1 Score: 78.5666 bits (192), Expect = 8.156e-13
Identity = 62/222 (27.93%), Postives = 99/222 (44.59%), Query Frame = 0
Query:  141 GGTYNYNAAVAKPEEVYIKKAFDVK-LGDLALDARYRLPTQVAALTATLRRNADYIRAAFNTDS--VVERVEGSKRFSLP--GERQLALTPAWDQSTRAFELTVAQDIQA-----GKTNAVLELSQADKDGKLTLNHQVDDANTISPTLSLKRGYLTYQWTHLLGDGAKLQTTLDPFTDLDVTWSDPG-KGGEWVTRANIPLK----EPRTATLSFKRKFTF 347
            G  YNYN     P  V +K  F +  +  L +   + L +    +     R   YI +  +     +VE +  S  F LP      L L+P+ D         V   I+A     G+T  +L L    KD  L++ + + D+N I+P + LK   + YQW+    +GA L T +DP   +D+ W+D    GG+W+T   +PL+        A +  +R+F F
Sbjct:   88 GIGYNYNDLKRLPSLVDVKGKFSLGPINQLEIQPVFDLRSGQKDILLQFTRGPSYIFSKLSNQRRRLVESINASALFYLPFASLSTLRLSPSVDFRQTLLTDKVTCTIEAVTGGAGRTKTILNLRA--KDPTLSMVYALSDSNVIAPEIHLKDARVLYQWSVKWNNGAMLHTKVDPSHSIDINWTDQSTGGGKWITDIRLPLEGTSIRGLAAEVKVRRQFIF 307          
BLAST of EWM22071.1 vs. NCBI_GenBank
Match: gi|219125706|ref|XP_002183115.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217405390|gb|EEC45333.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 75.0998 bits (183), Expect = 1.526e-11
Identity = 67/238 (28.15%), Postives = 105/238 (44.12%), Query Frame = 0
Query:  126 LEGAVETLLADDVVVGGTYNYNAAVAKPEEVYIKKAFD--VKLGDLALDA----RYRLPTQVAALTATLRRNADYIRAAFNT--DSVVERVEGSKRFSLP--GERQLALTPAWDQSTRAFELTV-AQDIQAGKTNAVLELSQADKDGKLTLNHQVDDANTISPTLSLKRGYLTYQWTHLLGDGAKLQTTLDPFTDLDVTWSDP-GKGGEWVTRANIPLK----EPRTATLSFKRKFTF 347
            L   V TL      VG  Y+Y+     P  + +    +  VK    A +A     +   T+  ++ A + R    + A F T    ++E    S    LP      + +TP+ D   R     V A    A +T AVL L     +  LT+ H +D  +TI+P +SL    +TY W   L  G  +QT +DP +D+ ++W+DP   GG W T   +PL+    +   A +  +R+F F
Sbjct:  107 LPNWVPTLNGVKAAVG--YDYHPYAQSPPTLLLPSWIEGTVKFSRNAFEAILQPSHDFRTKRTSVVAQVSRGTSNLLARFGTRQKHLLEAATASLHMHLPYTSVSAVRVTPSVDIVARNLSCRVEAVSGGAARTKAVLNLEY--DNPTLTVLHSLDARHTIAPEISLYNAKITYAWNVALAGGGSVQTKVDPISDIRISWNDPSAAGGSWTTDVRLPLEGTTMQALAADIRVRRQFRF 340          
BLAST of EWM22071.1 vs. NCBI_GenBank
Match: gi|676398201|ref|XP_009042378.1| (expressed protein, partial [Aureococcus anophagefferens] >gi|323446924|gb|EGB02923.1| expressed protein, partial [Aureococcus anophagefferens])

HSP 1 Score: 74.7146 bits (182), Expect = 6.595e-11
Identity = 59/244 (24.18%), Postives = 108/244 (44.26%), Query Frame = 0
Query:  111 VTATDTTVKDLSTLNLEGAVETLLADDVVVGGTYNYNAAVAKPEEVYIKKAFDVKLGD-LALDARYRLPTQVAALTATLRRNADYIRAAFNT--DSVVERVEGSKRFSLPGERQLALTPAWDQSTRAFELTVAQDIQAGKTNAVLELSQADKDGK------LTLNHQVDDANTISPTLSLKRGYLTYQWTHLLGDGAKLQTTLDPFTDLDVTWSDPGKGGEWVTRANIPLKEPRTATLSFKRKF 345
            V   + ++  +   NLEG VET ++D +  G TY+ N+A   P+ ++ +  +  K  D L +   + +  Q A +     +        FN+   S++     S+ FS+ G R + + P+++     F   V+  + +  T+  L L  AD   +      + ++H  +  N+I  T +L  G  TY++   LG  A L     P   +++ W + G  G W T   +P  +P  A +S    F
Sbjct:    1 VNIKEASLLSVEATNLEGEVETRISDQIAAGATYDQNSAQFAPKALFTR--WTAKGSDPLEVTGTFNIADQSAEVDVKYEKLGSKFGVNFNSARSSLITAARTSRDFSVEG-RTINVAPSYN-----FVTGVSSALTS-DTSVELALDSADVADRDALQSVVCIDHSFNGKNSIKHTFALNSGVSTYEYKRKLGGDAALSVAAHPGKSVEIEWDEVGTTGLWTTNVRLPWGKPDRAQVSLAMDF 235          
BLAST of EWM22071.1 vs. NCBI_GenBank
Match: gi|1072235049|gb|OEU19778.1| (hypothetical protein FRACYDRAFT_224532 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 65.4698 bits (158), Expect = 2.462e-8
Identity = 53/183 (28.96%), Postives = 91/183 (49.73%), Query Frame = 0
Query:  173 ARYRLPTQVAALTATLRRNADYIRAAFNTDSVVERVEGSKRFSLP----GERQLALTPAWDQSTRAFELTVAQDIQAGKTNAVLELSQADKDGKLTLNHQVDDANTISPTLSLKRGYLTYQWTHLLGDGAKLQTTLDPFTDLDVTWSDPGKGGEWVTRANIPLKEPRTATLS----FKRKFTF 347
            +R  + T +A    T   N D    + ++ S++E V+G  + +LP    GE  + +TP+ D         +     + +T AVL L     +  L++ H +++ NTI+P +SL    + YQW   L D   ++T +DP +D+ VTW+D    G+WVT   +PL     + L+     +R+F F
Sbjct:  131 SRGSVATLMAKFGTTANSNKDAATTS-SSRSLLETVKGCYQATLPYASVGE--VRVTPSVDLIRGHVSCLLEAVTGSQRTKAVLNLEY--DNPTLSVIHNLNERNTIAPEISLYDARILYQWNIAL-DSGSIRTKVDPTSDVCVTWTDRSMNGKWVTDVRLPLTGTTLSALAADVKVRRQFNF 307          
BLAST of EWM22071.1 vs. NCBI_GenBank
Match: gi|557737770|gb|ESS33718.1| (putative transmembrane protein [Toxoplasma gondii VEG] >gi|820700202|tpe|CEL75935.1| TPA: hypothetical protein BN1205_083215 [Toxoplasma gondii VEG])

HSP 1 Score: 62.003 bits (149), Expect = 4.362e-7
Identity = 43/148 (29.05%), Postives = 69/148 (46.62%), Query Frame = 0
Query:  218 GERQLALTPAWDQSTRAFELTVAQDIQAGKTNAVLELSQADKDGKLTLNHQVDDANTI--------------SPTLSLKRGYLTYQWTHLLGDGAKLQTTLDPFTDLDVTWSDP-GKGGEWVTRANIPL---KEPRTATLSFKRKFTF 347
            GER + + P+ D  T+  EL     IQ GK     +    + + ++   H  +  +T+              +P L LK   L Y++TH L  G  ++  + P   L + W DP   GG WV +A +PL   K  R  T++F+R++TF
Sbjct:  208 GERFVKIQPSHDFQTQTSELR----IQGGKVPQEKDEQWTEVNVQVAREHPTNSWDTVVGVKQHFGGGRVTFAPFLRLKDRSLHYEYTHSLSSGGVVKVQMQPLHFLRLQWRDPSASGGSWVAQAELPLQKGKSLREGTVAFRREWTF 351          
BLAST of EWM22071.1 vs. NCBI_GenBank
Match: gi|523573163|gb|EPR59980.1| (hypothetical protein TGGT1_289360 [Toxoplasma gondii GT1] >gi|672269875|gb|KFG42608.1| putative transmembrane protein [Toxoplasma gondii GAB2-2007-GAL-DOM2] >gi|672284034|gb|KFG53307.1| putative transmembrane protein [Toxoplasma gondii FOU])

HSP 1 Score: 61.6178 bits (148), Expect = 5.046e-7
Identity = 43/148 (29.05%), Postives = 69/148 (46.62%), Query Frame = 0
Query:  218 GERQLALTPAWDQSTRAFELTVAQDIQAGKTNAVLELSQADKDGKLTLNHQVDDANTI--------------SPTLSLKRGYLTYQWTHLLGDGAKLQTTLDPFTDLDVTWSDP-GKGGEWVTRANIPL---KEPRTATLSFKRKFTF 347
            GER + + P+ D  T+  EL     IQ GK     +    + + ++   H  +  +T+              +P L LK   L Y++TH L  G  ++  + P   L + W DP   GG WV +A +PL   K  R  T++F+R++TF
Sbjct:  208 GERFVKIQPSHDFQTQTSELR----IQGGKVPQEKDEQWTEVNVQVAREHPTNSWDTVVGVKQHFGGGRVTFAPFLRLKDRSLHYEYTHSLSSGGVVKVQMQPLHFLRLQWRDPSASGGSWVAQAELPLQKGKSLREGTVAFRREWTF 351          
The following BLAST results are available for this feature:
BLAST of EWM22071.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102487|gb|EWM22071.1|0.000e+0100.00hypothetical protein Naga_100244g5 [Nannochloropsi... [more]
gi|676379321|ref|XP_009032939.1|1.329e-2029.55hypothetical protein AURANDRAFT_70645 [Aureococcus... [more]
gi|299471754|emb|CBN76975.1|1.119e-1427.64conserved unknown protein [Ectocarpus siliculosus][more]
gi|1210521623|dbj|GAX19613.1|1.255e-1327.93hypothetical protein FisN_19Hh193 [Fistulifera sol... [more]
gi|1210531756|dbj|GAX09723.1|8.156e-1327.93hypothetical protein FisN_19Lh193 [Fistulifera sol... [more]
gi|219125706|ref|XP_002183115.1|1.526e-1128.15predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|676398201|ref|XP_009042378.1|6.595e-1124.18expressed protein, partial [Aureococcus anophageff... [more]
gi|1072235049|gb|OEU19778.1|2.462e-828.96hypothetical protein FRACYDRAFT_224532 [Fragilario... [more]
gi|557737770|gb|ESS33718.1|4.362e-729.05putative transmembrane protein [Toxoplasma gondii ... [more]
gi|523573163|gb|EPR59980.1|5.046e-729.05hypothetical protein TGGT1_289360 [Toxoplasma gond... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8632rna8632Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications