EWM22081.1, cds8599 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22081.1 vs. NCBI_GenBank
Match: gi|585102498|gb|EWM22081.1| (GrpE nucleotide exchange factor [Nannochloropsis gaditana]) HSP 1 Score: 394.43 bits (1012), Expect = 8.340e-139 Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0
Query: 1 MLLFNGVPTLMLHAQHKAPEQENASGTPGEEKAAGAAEDEQGKLIEKLMAENKELKDKVLYTLAEMENVRTIARRDAASAKQFALQSFAKQLLDVADNLNRALASVPKEALEEGGEAVEGVAMTDAQLQKVFAANQIVQYGKPGDKFDPHMHDALFEYEEEGREGGSVGQVLKTGYTLNGRVIRPAQVGTVKKAA 195
MLLFNGVPTLMLHAQHKAPEQENASGTPGEEKAAGAAEDEQGKLIEKLMAENKELKDKVLYTLAEMENVRTIARRDAASAKQFALQSFAKQLLDVADNLNRALASVPKEALEEGGEAVEGVAMTDAQLQKVFAANQIVQYGKPGDKFDPHMHDALFEYEEEGREGGSVGQVLKTGYTLNGRVIRPAQVGTVKKAA
Sbjct: 1 MLLFNGVPTLMLHAQHKAPEQENASGTPGEEKAAGAAEDEQGKLIEKLMAENKELKDKVLYTLAEMENVRTIARRDAASAKQFALQSFAKQLLDVADNLNRALASVPKEALEEGGEAVEGVAMTDAQLQKVFAANQIVQYGKPGDKFDPHMHDALFEYEEEGREGGSVGQVLKTGYTLNGRVIRPAQVGTVKKAA 195
BLAST of EWM22081.1 vs. NCBI_GenBank
Match: gi|953487981|emb|CEG47998.1| (mitochondrial protein translocase family [Plasmopara halstedii]) HSP 1 Score: 174.481 bits (441), Expect = 1.195e-51 Identity = 88/154 (57.14%), Postives = 114/154 (74.03%), Query Frame = 0
Query: 45 IEKLMAENKELKDKVLYTLAEMENVRTIARRDAASAKQFALQSFAKQLLDVADNLNRALASVPKEALE--EGGEAV----EGVAMTDAQLQKVFAANQIVQYGKPGDKFDPHMHDALFEYEEEGREGGSVGQVLKTGYTLNGRVIRPAQVGTVK 192
+E+L A+NK++ D++L LA+ ENVR I+R D +A++FA+ FAK LLDV+DNL RA SV EALE + +A+ EGVAMT+ QLQKVF I Q G GDKFDP++HDALFEYE+ +E G +GQ++KTGYTLN RVIRPAQVG +K
Sbjct: 57 LEQLAAQNKDMNDRLLRALADAENVRRISRVDVNNAREFAISKFAKALLDVSDNLKRAHESVDVEALEPEKQLDAIKMLHEGVAMTETQLQKVFREFNINQVGAVGDKFDPNVHDALFEYEDATKEAGCIGQIMKTGYTLNDRVIRPAQVGVIK 210
BLAST of EWM22081.1 vs. NCBI_GenBank
Match: gi|301105118|ref|XP_002901643.1| (Mitochondrial Protein Translocase (MPT) Family [Phytophthora infestans T30-4] >gi|262100647|gb|EEY58699.1| Mitochondrial Protein Translocase (MPT) Family [Phytophthora infestans T30-4]) HSP 1 Score: 172.555 bits (436), Expect = 5.871e-51 Identity = 90/180 (50.00%), Postives = 123/180 (68.33%), Query Frame = 0
Query: 19 PEQENASGTPGEEKAAGAAEDEQGKLIEKLMAENKELKDKVLYTLAEMENVRTIARRDAASAKQFALQSFAKQLLDVADNLNRALASV------PKEALEEGGEAVEGVAMTDAQLQKVFAANQIVQYGKPGDKFDPHMHDALFEYEEEGREGGSVGQVLKTGYTLNGRVIRPAQVGTVK 192
P +E A+ T EE+ + ++ K +E+L +NK++ D++L LA+ ENVR I+R D +A++FA+ FAK LLDV+DNL RA S+ P++ L+ EGV MT+ QLQKVF +I Q G GDKFDP++HDALFEYE+ +E GS+GQ++KTGY LN RVIRPAQVG VK
Sbjct: 34 PAEETAAKTEAEEEPPLSDAEKLQKQVEELTTQNKDMNDRLLRALADAENVRRISRVDVNNAREFAISKFAKALLDVSDNLKRAHESIDVATLQPEKQLDAIEMLHEGVVMTEQQLQKVFREFKINQVGAVGDKFDPNVHDALFEYEDATKEAGSIGQLMKTGYLLNERVIRPAQVGVVK 213
BLAST of EWM22081.1 vs. NCBI_GenBank
Match: gi|325181744|emb|CCA16200.1| (Mitochondrial Protein Translocase (MPT) Family puta [Albugo laibachii Nc14]) HSP 1 Score: 169.088 bits (427), Expect = 1.605e-49 Identity = 86/179 (48.04%), Postives = 116/179 (64.80%), Query Frame = 0
Query: 20 EQENASGTPGEEKAAGAAEDEQGKLIEKLMAENKELKDKVLYTLAEMENVRTIARRDAASAKQFALQSFAKQLLDVADNLNRALASV------PKEALEEGGEAVEGVAMTDAQLQKVFAANQIVQYGKPGDKFDPHMHDALFEYEEEGREGGSVGQVLKTGYTLNGRVIRPAQVGTVK 192
E+E S TP E + K +E+L +++K++ D +L LA+ ENVR I+R+D +A+ FA+ FA+ LLDVADNL RA S+ P LE EGV MTD QLQKVF I G+ GD+FDP+MHDALFEYE++ +E G++GQ++K GY LN R+IRPAQVG +K
Sbjct: 35 EKEETSETPTESVKEEETLESLKKKVEELESDSKKINDHLLRALADAENVRRISRQDVQNARDFAISKFARNLLDVADNLQRAHESIKIEELHPDRTLEAIKSLHEGVVMTDQQLQKVFQEFNINPVGQVGDRFDPNMHDALFEYEDDTKEPGTIGQLMKRGYLLNSRIIRPAQVGVIK 213
BLAST of EWM22081.1 vs. NCBI_GenBank
Match: gi|695389983|ref|XP_009519586.1| (hypothetical protein PHYSODRAFT_311338 [Phytophthora sojae] >gi|348684483|gb|EGZ24298.1| hypothetical protein PHYSODRAFT_311338 [Phytophthora sojae]) HSP 1 Score: 168.703 bits (426), Expect = 2.181e-49 Identity = 87/156 (55.77%), Postives = 114/156 (73.08%), Query Frame = 0
Query: 43 KLIEKLMAENKELKDKVLYTLAEMENVRTIARRDAASAKQFALQSFAKQLLDVADNLNRALASVPKEAL--EEGGEAV----EGVAMTDAQLQKVFAANQIVQYGKPGDKFDPHMHDALFEYEEEGREGGSVGQVLKTGYTLNGRVIRPAQVGTVK 192
K ++ L A+NK++ D++L LA+ ENVR I+R D +A++FA+ FAK LLDV+DNL RA S+ EAL E+ +A+ EGV MT+ QLQKVF +I Q G GDKFDP++HDALFEYE+ +E GS+GQ++KTGY LN RVIRPAQVG VK
Sbjct: 61 KQVKDLEAKNKDMNDRLLRALADAENVRRISRVDVNNAREFAISKFAKALLDVSDNLKRAHESIDIEALQPEKQLDAIKVLHEGVVMTETQLQKVFREFKINQVGAIGDKFDPNVHDALFEYEDTTKEAGSIGQLMKTGYLLNERVIRPAQVGVVK 216
BLAST of EWM22081.1 vs. NCBI_GenBank
Match: gi|675195535|ref|XP_008906652.1| (hypothetical protein PPTG_12394 [Phytophthora parasitica INRA-310] >gi|566021719|gb|ETI44630.1| hypothetical protein F443_10681 [Phytophthora parasitica P1569] >gi|567959024|gb|ETK84606.1| hypothetical protein L915_10448 [Phytophthora parasitica] >gi|567987748|gb|ETL38043.1| hypothetical protein L916_10341 [Phytophthora parasitica] >gi|568016967|gb|ETL91144.1| hypothetical protein L917_10280 [Phytophthora parasitica] >gi|568047377|gb|ETM44458.1| hypothetical protein L914_10311 [Phytophthora parasitica] >gi|568093049|gb|ETN07848.1| hypothetical protein PPTG_12394 [Phytophthora parasitica INRA-310] >gi|570325314|gb|ETO73262.1| hypothetical protein F444_10785 [Phytophthora parasitica P1976] >gi|570949181|gb|ETP14438.1| hypothetical protein F441_10631 [Phytophthora parasitica CJ01A1] >gi|570982360|gb|ETP42507.1| hypothetical protein F442_10594 [Phytophthora parasitica P10297]) HSP 1 Score: 167.933 bits (424), Expect = 4.041e-49 Identity = 86/156 (55.13%), Postives = 114/156 (73.08%), Query Frame = 0
Query: 43 KLIEKLMAENKELKDKVLYTLAEMENVRTIARRDAASAKQFALQSFAKQLLDVADNLNRALASVPKEALE--EGGEAV----EGVAMTDAQLQKVFAANQIVQYGKPGDKFDPHMHDALFEYEEEGREGGSVGQVLKTGYTLNGRVIRPAQVGTVK 192
K +E+L +NK++ D++L LA+ ENVR I+R D +A++FA+ FAK LLDV+DNL RA S+ ALE + +A+ EGV MT+ QLQKVF +I Q G+ GDKFDP++HDALFEYE+ +E GS+GQ++KTGY LN RVIRPAQVG VK
Sbjct: 61 KQVEELTTQNKDMNDRLLRALADAENVRRISRVDVNNAREFAISKFAKALLDVSDNLKRAHESIDIPALEPEKQLDAIKMLHEGVVMTEQQLQKVFREFKIHQVGEVGDKFDPNVHDALFEYEDATKEAGSIGQLMKTGYLLNDRVIRPAQVGVVK 216
BLAST of EWM22081.1 vs. NCBI_GenBank
Match: gi|970631173|gb|KUF77871.1| (GrpE protein [Phytophthora nicotianae] >gi|970653043|gb|KUF91592.1| hypothetical protein AM588_10003218 [Phytophthora nicotianae]) HSP 1 Score: 167.933 bits (424), Expect = 5.303e-49 Identity = 86/156 (55.13%), Postives = 114/156 (73.08%), Query Frame = 0
Query: 43 KLIEKLMAENKELKDKVLYTLAEMENVRTIARRDAASAKQFALQSFAKQLLDVADNLNRALASVPKEALE--EGGEAV----EGVAMTDAQLQKVFAANQIVQYGKPGDKFDPHMHDALFEYEEEGREGGSVGQVLKTGYTLNGRVIRPAQVGTVK 192
K +E+L +NK++ D++L LA+ ENVR I+R D +A++FA+ FAK LLDV+DNL RA S+ ALE + +A+ EGV MT+ QLQKVF +I Q G+ GDKFDP++HDALFEYE+ +E GS+GQ++KTGY LN RVIRPAQVG VK
Sbjct: 61 KQVEELTTQNKDMNDRLLRALADAENVRRISRVDVNNAREFAISKFAKALLDVSDNLKRAHESIDIPALEPEKQLDAIKMLHEGVVMTEQQLQKVFREFKIHQVGEVGDKFDPNVHDALFEYEDATKEAGSIGQLMKTGYLLNDRVIRPAQVGVVK 216
BLAST of EWM22081.1 vs. NCBI_GenBank
Match: gi|1214713697|gb|OWZ24580.1| (Mitochondrial Protein Translocase [Phytophthora megakarya]) HSP 1 Score: 166.777 bits (421), Expect = 1.199e-48 Identity = 96/192 (50.00%), Postives = 125/192 (65.10%), Query Frame = 0
Query: 24 ASGTP---GEEKAAGAAEDEQ-----------GKL---IEKLMAENKELKDKVLYTLAEMENVRTIARRDAASAKQFALQSFAKQLLDVADNLNRALASVPKEALE--EGGEAV----EGVAMTDAQLQKVFAANQIVQYGKPGDKFDPHMHDALFEYEEEGREGGSVGQVLKTGYTLNGRVIRPAQVGTVK 192
S TP +EK+ AA+DE KL ++ L A NK++ D++L LA+ ENVR I+R D +A++FA+ FAK LLDV+DNL RA S+ ALE + +A+ EGV MT+ QLQKVF +I Q G GDKFDP++HDALFEYE+ +E GS+GQ++KTGY LN RVIRPAQVG VK
Sbjct: 21 VSQTPVRFADEKSEEAAKDESKSEEPVELSETDKLQQQVDDLTATNKDMNDRLLRALADAENVRRISRVDVNNAREFAISKFAKALLDVSDNLTRAHESIDVAALEPEKQLDAIKILHEGVVMTENQLQKVFREFKINQVGAVGDKFDPNVHDALFEYEDATKEAGSIGQLMKTGYLLNERVIRPAQVGVVK 212
BLAST of EWM22081.1 vs. NCBI_GenBank
Match: gi|347360849|emb|CCC55868.1| (RxLR effector candidate precursor, partial [Hyaloperonospora arabidopsidis Emoy2]) HSP 1 Score: 165.622 bits (418), Expect = 2.246e-48 Identity = 84/156 (53.85%), Postives = 115/156 (73.72%), Query Frame = 0
Query: 43 KLIEKLMAENKELKDKVLYTLAEMENVRTIARRDAASAKQFALQSFAKQLLDVADNLNRALASVPKEALE--EGGEAV----EGVAMTDAQLQKVFAANQIVQYGKPGDKFDPHMHDALFEYEEEGREGGSVGQVLKTGYTLNGRVIRPAQVGTVK 192
K +E+L +NK++ D++L LA+ ENVR I+R D ++A++FA+ FAK LLDV+DNL RA S+ +ALE + +A+ EGV MT++QLQKVF +I Q G GDKFDP++HDALFEY++ +E GS+GQ++K GY LN RVIRPAQVG VK
Sbjct: 46 KEVEELSVKNKDMNDRLLRALADAENVRRISRIDVSNAREFAISKFAKALLDVSDNLKRAHESIDVDALEPEKQLDAIKVLHEGVVMTESQLQKVFREFKINQVGAVGDKFDPNVHDALFEYDDATKEAGSIGQLMKPGYLLNERVIRPAQVGVVK 201
BLAST of EWM22081.1 vs. NCBI_GenBank
Match: gi|635366228|emb|CCI45419.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 164.851 bits (416), Expect = 3.894e-48 Identity = 88/182 (48.35%), Postives = 118/182 (64.84%), Query Frame = 0
Query: 17 KAPEQENASGTPGEEKAAGAAEDEQGKLIEKLMAENKELKDKVLYTLAEMENVRTIARRDAASAKQFALQSFAKQLLDVADNLNRALASVPKEALEEGG--EAV----EGVAMTDAQLQKVFAANQIVQYGKPGDKFDPHMHDALFEYEEEGREGGSVGQVLKTGYTLNGRVIRPAQVGTVK 192
+ E+E AS P E E K +++L ++K++ D +L LA+ ENVR I+R+D +A+ FA+ FAK LLDVADNL RA S + L G EA+ EGV MTD QLQKVF I G+ GD+FDP+MHDALFEYE++ +E G++GQ++K GY LN R+IRPAQVG +K
Sbjct: 11 RNSEKEEASELPNESVKEETVE-ALKKRVDELELDSKKINDHLLRALADAENVRRISRQDVQNARDFAISKFAKSLLDVADNLQRAHTSTKIDTLHPDGNLEAIKSLHEGVVMTDQQLQKVFQEFNINPVGQVGDRFDPNMHDALFEYEDDTKEPGTIGQLMKRGYLLNSRIIRPAQVGVIK 191 The following BLAST results are available for this feature:
BLAST of EWM22081.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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