EWM22106.1, cds8567 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22106.1 vs. NCBI_GenBank
Match: gi|585102524|gb|EWM22106.1| (hypothetical protein Naga_102781g1 [Nannochloropsis gaditana]) HSP 1 Score: 334.339 bits (856), Expect = 6.767e-116 Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0
Query: 1 MGPVEWKGIRGADNRCYVLDLVRLTPRDPNWIKEDEQDPGRGGTGVWERAKPVEGVPPLEEDFSAVIRPELLGLYVRSQVLALRQKAEETCVAKRRKEGKEKKEKKEGAGVEDGQGEDSGKEEEEATLDEEGKARLKEEEEELLERMKVNANAFLPLAGVRDREQKCRRGR 171
MGPVEWKGIRGADNRCYVLDLVRLTPRDPNWIKEDEQDPGRGGTGVWERAKPVEGVPPLEEDFSAVIRPELLGLYVRSQVLALRQKAEETCVAKRRKEGKEKKEKKEGAGVEDGQGEDSGKEEEEATLDEEGKARLKEEEEELLERMKVNANAFLPLAGVRDREQKCRRGR
Sbjct: 1 MGPVEWKGIRGADNRCYVLDLVRLTPRDPNWIKEDEQDPGRGGTGVWERAKPVEGVPPLEEDFSAVIRPELLGLYVRSQVLALRQKAEETCVAKRRKEGKEKKEKKEGAGVEDGQGEDSGKEEEEATLDEEGKARLKEEEEELLERMKVNANAFLPLAGVRDREQKCRRGR 171
BLAST of EWM22106.1 vs. NCBI_GenBank
Match: gi|1210511723|dbj|GAX29207.1| (protein TIF31 [Fistulifera solaris]) HSP 1 Score: 82.8037 bits (203), Expect = 2.301e-15 Identity = 58/171 (33.92%), Postives = 88/171 (51.46%), Query Frame = 0
Query: 3 PVEWKGIRGADNRCYVLDLVRLTPRDPNWIKEDEQDPGRGGTGVWERAKPVEGVPPLEED---FSAVIRPELLGLYVRSQV---LALRQKAEETCVAKRRKEGKE-----------KKEKKEGAGVEDGQGEDSGKEEEEATLDEEGKARLKEEEEELLERMKVNANAFLP 156
P+E KGI G+D R Y+LDL RLTPRD NW+ E GGTG +E + +P +D V+RPEL+ + ++++ LAL+++A ++ K E K+++K A E+ Q E EE D + +L EE+E E +K+N N F+P
Sbjct: 700 PIEAKGIMGSDKRKYLLDLGRLTPRDANWVSASE-----GGTGKFEGLQLTSNIPSTLQDDEWTMHVLRPELVTRFTQTKMARYLALKKEAADSESKKSDDEVSNEKSNDNTLSEIKEQEKTDASEENAQSETIPSNSEEK--DTQDSRKLTEEDEAYAETLKLNINVFMP 863
BLAST of EWM22106.1 vs. NCBI_GenBank
Match: gi|1210515487|dbj|GAX25566.1| (protein TIF31 [Fistulifera solaris]) HSP 1 Score: 75.485 bits (184), Expect = 9.874e-13 Identity = 51/169 (30.18%), Postives = 80/169 (47.34%), Query Frame = 0
Query: 3 PVEWKGIRGADNRCYVLDLVRLTPRDPNWIKEDEQDPGRGGTGVWERAKPVEGVPPLEED---FSAVIRPELLGLYVRSQVLALRQKAEETCVAKRRKEGKE------------KKEKKEGAGVEDGQGEDSGKEEEEATLDEEGKARLKEEEEELLERMKVNANAFLP 156
P+E KGI G+D R Y+LD RLTPRD NW+ E GGTG +E + +P D V+RPEL+ + ++++ + +E ++ +K E K EK+E A + + + G D +L EE++ E +K+N N F+P
Sbjct: 698 PIEAKGIMGSDKRKYLLDFGRLTPRDANWVPASE-----GGTGKFEGLQLTSNIPATLHDDEWTMHVLRPELVTRFTQTKMARYLESKKEVADSESKKSDDEAPSETSNDNALSKSEKQEKADKSEEKAQSEGTPSNSEEKDTPESRKLTEEDKAYAETLKLNINVFMP 861
BLAST of EWM22106.1 vs. NCBI_GenBank
Match: gi|224002356|ref|XP_002290850.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220974272|gb|EED92602.1| predicted protein [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 74.7146 bits (182), Expect = 1.624e-12 Identity = 64/173 (36.99%), Postives = 83/173 (47.98%), Query Frame = 0
Query: 2 GPVEWKGIRGADNRCYVLDLVRLTPRDPNWIKEDEQDPGRGGTGVWER-AKPVEGVPPLEED----FSAVIRPELLGLYVRSQVL-ALRQKAEETCVAKRRKEGKEKKEKKEGAGVEDGQGEDSGKE----EEEATLDEEGKARLKEEEEELLERMKVNANAFLPLAGVRDRE 164
GP E KGI G+D R YVLD RLTPRD NW+ + GGTGV++ A + P+ D V+RPEL+ Y +V LR +A KEG EK K +D G+ KE E E T + KA EEE + ++ N N F+P G+R E
Sbjct: 856 GPTEMKGILGSDKRRYVLDCTRLTPRDANWVSK-----ASGGTGVFDDGASDSNNLVPVTLDDDEWTVCVLRPELVTNYAEGKVAKFLRAQA---ATDGSDKEGSEKDSKP---AEKDPSGDTEEKEWVNVEAEKTKESNAKA-----EEEFIRSLRYNVNVFIP--GMRSIE 1010
BLAST of EWM22106.1 vs. NCBI_GenBank
Match: gi|1072235758|gb|OEU20486.1| (hypothetical protein FRACYDRAFT_180781 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 74.7146 bits (182), Expect = 1.793e-12 Identity = 55/156 (35.26%), Postives = 77/156 (49.36%), Query Frame = 0
Query: 2 GPVEWKGIRGADNRCYVLDLVRLTPRDPNWIKEDEQDPGRGGTGVWERAKPVEGVPPLEEDFSAVIR-PELLGLYVRSQVLALRQKAEETCVAKRRKEGKEKKEKKEGAGVEDGQGEDSGKEEEEATLDEEGKARLKEEEEELLERMKVNANAFLP 156
P+E KGIRG+D R YVLD+ RLTPRD NW+ +++ GGTG W+ E F + R PE LY LA+ ++E + K K +EKKE D D KE++ A D K + +++ L ++ N N FLP
Sbjct: 728 APLEAKGIRGSDQRKYVLDMTRLTPRDANWVPKND-----GGTGKWDSHLET------NEAFVSNARIPE--NLYDEEWTLAVL-RSELVSNYAQMKMAKYVQEKKEKDSTADDN--DKSKEDKPAETDSAEKKDMSKDDIAYLNSLRFNVNVFLP 867
BLAST of EWM22106.1 vs. NCBI_GenBank
Match: gi|219112103|ref|XP_002177803.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217410688|gb|EEC50617.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 71.2478 bits (173), Expect = 2.314e-11 Identity = 60/179 (33.52%), Postives = 81/179 (45.25%), Query Frame = 0
Query: 3 PVEWKGIRGADNRCYVLDLVRLTPRDPNWIKEDEQDPGRGGTGVWERAKPVEG-----VPPL----EEDFSAVIRPELLGLYVRSQVLALRQ-----KAEETCVAKRRKEGKEKK------EKKEGAGVEDGQGEDSGKEEEEATL------DEEGKARLKEEEEELLERMKVNANAFL 155
PVE KGI G+D R YVLD RLTPRD NW+ E +GGTG WE AK G PL +E V+RPEL+ Y + + Q +AE + V E K E E ED G + ++ D+ + L EE+ + L+ +++N N FL
Sbjct: 740 PVEAKGILGSDQRKYVLDFGRLTPRDANWVPEK-----KGGTGKWEAAKTENGNKRHSAIPLDIKDDEWTMCVLRPELVSRYTQVSMGKYLQDKKNTEAERSAVDNPASENKPTSKDTMPTEGDEITSKEDNIDASEGSQVDKVNFPAAKDEDQLNEQNLSEEDLKYLKSLRLNVNVFL 913
BLAST of EWM22106.1 vs. NCBI_GenBank
Match: gi|397636483|gb|EJK72292.1| (hypothetical protein THAOC_06188, partial [Thalassiosira oceanica]) HSP 1 Score: 66.2402 bits (160), Expect = 1.625e-9 Identity = 56/170 (32.94%), Postives = 79/170 (46.47%), Query Frame = 0
Query: 2 GPVEWKGIRGADNRCYVLDLVRLTPRDPNWIKEDEQDPGRGGTGVWERAKPVEGVP-----PLEED--FSAVIRPELLGLYVRSQVLALRQKAEETCVAKRRKEGKEKKEKKEGAGVEDGQGEDSGKEEEEATLDEEGKARLKEEEEELLERMKVNANAFL----PLAGV 160
GP+E KGI G+D R YVLD RLT RD NW+ + RGGTG + AK P LE+D A++R EL+ Y ET +++ KE ++ K G +E ++DE + + E E ++ ++ N N FL PLAGV
Sbjct: 562 GPIEMKGILGSDKRKYVLDCTRLTGRDANWVSAE-----RGGTGKLDGAKDESSKPEVPNVDLEDDEWAVALLRSELVRSY------------SETKLSRFVKEKVDEVRAKHG---------------DEESMDEAARKLVSEAEAAYVKTLRYNVNVFLPDMRPLAGV 699
BLAST of EWM22106.1 vs. NCBI_GenBank
Match: gi|635359293|emb|CCI50622.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 64.6994 bits (156), Expect = 4.613e-9 Identity = 51/180 (28.33%), Postives = 83/180 (46.11%), Query Frame = 0
Query: 2 GPVEWKGIRGADNRCYVLDLVRLTPRDPNWIKEDEQDPGRGGTGVWERAKPVEGVPPLEED--FSAVIRPELLGLYV---RSQVLALRQKAEETCVAKRRKEGKEKKEKKEGAGVEDGQGEDSGKEEEEA--------TLDEEGKARLKEEEEELLERMKVNANAFLPLAGVRDREQKCR 168
GPVE KGI G+D R Y LDLVR+TP+D + +++ V+G+ ED + A++RPEL+ LYV R+Q+ R K + + K+ +K G+E+G+G ++E+A L+ L E ++ N N F+ D++Q +
Sbjct: 670 GPVEAKGILGSDGRMYALDLVRITPKDSTFYEQESVS-----------NMNVDGLHFQREDDTYVALLRPELINLYVLWRRNQI--RRAKRDVSSDTKKLDSNTSDDKKALEEGIENGEGTAVKTKDEQALESAKSPSDLENTKDVSLANTNENEPAPIQFNPNVFMKYDACVDKDQAVK 836
BLAST of EWM22106.1 vs. NCBI_GenBank
Match: gi|813133605|ref|XP_012197876.1| (hypothetical protein SPRG_03892 [Saprolegnia parasitica CBS 223.65] >gi|641537424|gb|KDO31277.1| hypothetical protein SPRG_03892 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 63.929 bits (154), Expect = 9.682e-9 Identity = 48/157 (30.57%), Postives = 71/157 (45.22%), Query Frame = 0
Query: 2 GPVEWKGIRGADNRCYVLDLVRLTPRDPNWIKEDEQDPGRGGTGVWERAKPVEGVPPLEEDFSAVIRPELLGLYVRSQVLALRQKAEETCVAKRRKEGKEKKEKKEGAGVEDGQGEDSGKEEEEATLDEEGKARLKEEEEELLERMKVNANAFLPLA 158
GPVE KGI G+DNR Y+LDLVR+TP+D + + V E ++ ++A++RPEL+ LY R + +Q A++T + E K D KE+E DEE +A ++ NAN +P A
Sbjct: 510 GPVEAKGILGSDNRHYILDLVRITPKDYTFYNPESDT-------VTEASRASLLADADAGKYTALLRPELVQLYARWKANQAKQAAKKTTDEDKADEAKA----------------DEAKEDEAKADDEEVEA----------ASLRFNANVLMPYA 633
BLAST of EWM22106.1 vs. NCBI_GenBank
Match: gi|325180398|emb|CCA14802.1| (eukaryotic translation initiation factor 3 subunit p [Albugo laibachii Nc14]) HSP 1 Score: 60.4622 bits (145), Expect = 1.459e-7 Identity = 49/176 (27.84%), Postives = 76/176 (43.18%), Query Frame = 0
Query: 2 GPVEWKGIRGADNRCYVLDLVRLTPRDPNWIKEDEQDPGRGGTGVWERAKPVEGVPPLEEDFSAVIRPELLGLYV---RSQVLALRQKAEETCVAKRRKEG------KEKKEKKEGAGVEDGQGEDSGKEEEEATLDEEGKARLKEEEEELLERMKVNANAFLPLAGVRDREQKCR 168
GPVE KGI G+D R Y LDLVR+TP+D + + ++R +E + A++RPEL+ LYV R+Q+ + A K K++ E E A E+ E+ +T + L +E+ ++ N N F+ D+EQ R
Sbjct: 672 GPVEAKGILGSDGRMYALDLVRITPKDSTYYEPQPLSNENADGLHFQRE---------DETYVALLRPELINLYVLWRRNQIRRANRDANNKSKELNSKASDNNNTLKKQIENSEEAPTENADEPALKPEKVPSTSESTKDVSLVSTKEDESAPIQFNPNVFMKYDACVDKEQVAR 838 The following BLAST results are available for this feature:
BLAST of EWM22106.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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