EWM22106.1, cds8567 (CDS) Nannochloropsis gaditana

Overview
NameEWM22106.1
Unique Namecds8567
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:360159..360653 -
Alignment locationKK037249.1:360062..360082 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22106.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_102781g1.7202.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:360159..360653 -
KK037249.1supercontigKK037249.1:360062..360082 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: INTERPRO
TermDefinition
IPR025697CLU_dom
Homology
BLAST of EWM22106.1 vs. NCBI_GenBank
Match: gi|585102524|gb|EWM22106.1| (hypothetical protein Naga_102781g1 [Nannochloropsis gaditana])

HSP 1 Score: 334.339 bits (856), Expect = 6.767e-116
Identity = 171/171 (100.00%), Postives = 171/171 (100.00%), Query Frame = 0
Query:    1 MGPVEWKGIRGADNRCYVLDLVRLTPRDPNWIKEDEQDPGRGGTGVWERAKPVEGVPPLEEDFSAVIRPELLGLYVRSQVLALRQKAEETCVAKRRKEGKEKKEKKEGAGVEDGQGEDSGKEEEEATLDEEGKARLKEEEEELLERMKVNANAFLPLAGVRDREQKCRRGR 171
            MGPVEWKGIRGADNRCYVLDLVRLTPRDPNWIKEDEQDPGRGGTGVWERAKPVEGVPPLEEDFSAVIRPELLGLYVRSQVLALRQKAEETCVAKRRKEGKEKKEKKEGAGVEDGQGEDSGKEEEEATLDEEGKARLKEEEEELLERMKVNANAFLPLAGVRDREQKCRRGR
Sbjct:    1 MGPVEWKGIRGADNRCYVLDLVRLTPRDPNWIKEDEQDPGRGGTGVWERAKPVEGVPPLEEDFSAVIRPELLGLYVRSQVLALRQKAEETCVAKRRKEGKEKKEKKEGAGVEDGQGEDSGKEEEEATLDEEGKARLKEEEEELLERMKVNANAFLPLAGVRDREQKCRRGR 171          
BLAST of EWM22106.1 vs. NCBI_GenBank
Match: gi|1210511723|dbj|GAX29207.1| (protein TIF31 [Fistulifera solaris])

HSP 1 Score: 82.8037 bits (203), Expect = 2.301e-15
Identity = 58/171 (33.92%), Postives = 88/171 (51.46%), Query Frame = 0
Query:    3 PVEWKGIRGADNRCYVLDLVRLTPRDPNWIKEDEQDPGRGGTGVWERAKPVEGVPPLEED---FSAVIRPELLGLYVRSQV---LALRQKAEETCVAKRRKEGKE-----------KKEKKEGAGVEDGQGEDSGKEEEEATLDEEGKARLKEEEEELLERMKVNANAFLP 156
            P+E KGI G+D R Y+LDL RLTPRD NW+   E     GGTG +E  +    +P   +D      V+RPEL+  + ++++   LAL+++A ++   K   E              K+++K  A  E+ Q E      EE   D +   +L EE+E   E +K+N N F+P
Sbjct:  700 PIEAKGIMGSDKRKYLLDLGRLTPRDANWVSASE-----GGTGKFEGLQLTSNIPSTLQDDEWTMHVLRPELVTRFTQTKMARYLALKKEAADSESKKSDDEVSNEKSNDNTLSEIKEQEKTDASEENAQSETIPSNSEEK--DTQDSRKLTEEDEAYAETLKLNINVFMP 863          
BLAST of EWM22106.1 vs. NCBI_GenBank
Match: gi|1210515487|dbj|GAX25566.1| (protein TIF31 [Fistulifera solaris])

HSP 1 Score: 75.485 bits (184), Expect = 9.874e-13
Identity = 51/169 (30.18%), Postives = 80/169 (47.34%), Query Frame = 0
Query:    3 PVEWKGIRGADNRCYVLDLVRLTPRDPNWIKEDEQDPGRGGTGVWERAKPVEGVPPLEED---FSAVIRPELLGLYVRSQVLALRQKAEETCVAKRRKEGKE------------KKEKKEGAGVEDGQGEDSGKEEEEATLDEEGKARLKEEEEELLERMKVNANAFLP 156
            P+E KGI G+D R Y+LD  RLTPRD NW+   E     GGTG +E  +    +P    D      V+RPEL+  + ++++    +  +E   ++ +K   E            K EK+E A   + + +  G        D     +L EE++   E +K+N N F+P
Sbjct:  698 PIEAKGIMGSDKRKYLLDFGRLTPRDANWVPASE-----GGTGKFEGLQLTSNIPATLHDDEWTMHVLRPELVTRFTQTKMARYLESKKEVADSESKKSDDEAPSETSNDNALSKSEKQEKADKSEEKAQSEGTPSNSEEKDTPESRKLTEEDKAYAETLKLNINVFMP 861          
BLAST of EWM22106.1 vs. NCBI_GenBank
Match: gi|224002356|ref|XP_002290850.1| (predicted protein [Thalassiosira pseudonana CCMP1335] >gi|220974272|gb|EED92602.1| predicted protein [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 74.7146 bits (182), Expect = 1.624e-12
Identity = 64/173 (36.99%), Postives = 83/173 (47.98%), Query Frame = 0
Query:    2 GPVEWKGIRGADNRCYVLDLVRLTPRDPNWIKEDEQDPGRGGTGVWER-AKPVEGVPPLEED----FSAVIRPELLGLYVRSQVL-ALRQKAEETCVAKRRKEGKEKKEKKEGAGVEDGQGEDSGKE----EEEATLDEEGKARLKEEEEELLERMKVNANAFLPLAGVRDRE 164
            GP E KGI G+D R YVLD  RLTPRD NW+ +       GGTGV++  A     + P+  D       V+RPEL+  Y   +V   LR +A         KEG EK  K      +D  G+   KE    E E T +   KA     EEE +  ++ N N F+P  G+R  E
Sbjct:  856 GPTEMKGILGSDKRRYVLDCTRLTPRDANWVSK-----ASGGTGVFDDGASDSNNLVPVTLDDDEWTVCVLRPELVTNYAEGKVAKFLRAQA---ATDGSDKEGSEKDSKP---AEKDPSGDTEEKEWVNVEAEKTKESNAKA-----EEEFIRSLRYNVNVFIP--GMRSIE 1010          
BLAST of EWM22106.1 vs. NCBI_GenBank
Match: gi|1072235758|gb|OEU20486.1| (hypothetical protein FRACYDRAFT_180781 [Fragilariopsis cylindrus CCMP1102])

HSP 1 Score: 74.7146 bits (182), Expect = 1.793e-12
Identity = 55/156 (35.26%), Postives = 77/156 (49.36%), Query Frame = 0
Query:    2 GPVEWKGIRGADNRCYVLDLVRLTPRDPNWIKEDEQDPGRGGTGVWERAKPVEGVPPLEEDFSAVIR-PELLGLYVRSQVLALRQKAEETCVAKRRKEGKEKKEKKEGAGVEDGQGEDSGKEEEEATLDEEGKARLKEEEEELLERMKVNANAFLP 156
             P+E KGIRG+D R YVLD+ RLTPRD NW+ +++     GGTG W+            E F +  R PE   LY     LA+  ++E      + K  K  +EKKE     D    D  KE++ A  D   K  + +++   L  ++ N N FLP
Sbjct:  728 APLEAKGIRGSDQRKYVLDMTRLTPRDANWVPKND-----GGTGKWDSHLET------NEAFVSNARIPE--NLYDEEWTLAVL-RSELVSNYAQMKMAKYVQEKKEKDSTADDN--DKSKEDKPAETDSAEKKDMSKDDIAYLNSLRFNVNVFLP 867          
BLAST of EWM22106.1 vs. NCBI_GenBank
Match: gi|219112103|ref|XP_002177803.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217410688|gb|EEC50617.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 71.2478 bits (173), Expect = 2.314e-11
Identity = 60/179 (33.52%), Postives = 81/179 (45.25%), Query Frame = 0
Query:    3 PVEWKGIRGADNRCYVLDLVRLTPRDPNWIKEDEQDPGRGGTGVWERAKPVEG-----VPPL----EEDFSAVIRPELLGLYVRSQVLALRQ-----KAEETCVAKRRKEGKEKK------EKKEGAGVEDGQGEDSGKEEEEATL------DEEGKARLKEEEEELLERMKVNANAFL 155
            PVE KGI G+D R YVLD  RLTPRD NW+ E      +GGTG WE AK   G       PL    +E    V+RPEL+  Y +  +    Q     +AE + V     E K         E  E    ED      G + ++         D+  +  L EE+ + L+ +++N N FL
Sbjct:  740 PVEAKGILGSDQRKYVLDFGRLTPRDANWVPEK-----KGGTGKWEAAKTENGNKRHSAIPLDIKDDEWTMCVLRPELVSRYTQVSMGKYLQDKKNTEAERSAVDNPASENKPTSKDTMPTEGDEITSKEDNIDASEGSQVDKVNFPAAKDEDQLNEQNLSEEDLKYLKSLRLNVNVFL 913          
BLAST of EWM22106.1 vs. NCBI_GenBank
Match: gi|397636483|gb|EJK72292.1| (hypothetical protein THAOC_06188, partial [Thalassiosira oceanica])

HSP 1 Score: 66.2402 bits (160), Expect = 1.625e-9
Identity = 56/170 (32.94%), Postives = 79/170 (46.47%), Query Frame = 0
Query:    2 GPVEWKGIRGADNRCYVLDLVRLTPRDPNWIKEDEQDPGRGGTGVWERAKPVEGVP-----PLEED--FSAVIRPELLGLYVRSQVLALRQKAEETCVAKRRKEGKEKKEKKEGAGVEDGQGEDSGKEEEEATLDEEGKARLKEEEEELLERMKVNANAFL----PLAGV 160
            GP+E KGI G+D R YVLD  RLT RD NW+  +     RGGTG  + AK     P      LE+D    A++R EL+  Y             ET +++  KE  ++   K G               +E ++DE  +  + E E   ++ ++ N N FL    PLAGV
Sbjct:  562 GPIEMKGILGSDKRKYVLDCTRLTGRDANWVSAE-----RGGTGKLDGAKDESSKPEVPNVDLEDDEWAVALLRSELVRSY------------SETKLSRFVKEKVDEVRAKHG---------------DEESMDEAARKLVSEAEAAYVKTLRYNVNVFLPDMRPLAGV 699          
BLAST of EWM22106.1 vs. NCBI_GenBank
Match: gi|635359293|emb|CCI50622.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 64.6994 bits (156), Expect = 4.613e-9
Identity = 51/180 (28.33%), Postives = 83/180 (46.11%), Query Frame = 0
Query:    2 GPVEWKGIRGADNRCYVLDLVRLTPRDPNWIKEDEQDPGRGGTGVWERAKPVEGVPPLEED--FSAVIRPELLGLYV---RSQVLALRQKAEETCVAKRRKEGKEKKEKKEGAGVEDGQGEDSGKEEEEA--------TLDEEGKARLKEEEEELLERMKVNANAFLPLAGVRDREQKCR 168
            GPVE KGI G+D R Y LDLVR+TP+D  + +++                 V+G+    ED  + A++RPEL+ LYV   R+Q+   R K + +   K+        +K    G+E+G+G     ++E+A         L+      L    E     ++ N N F+      D++Q  +
Sbjct:  670 GPVEAKGILGSDGRMYALDLVRITPKDSTFYEQESVS-----------NMNVDGLHFQREDDTYVALLRPELINLYVLWRRNQI--RRAKRDVSSDTKKLDSNTSDDKKALEEGIENGEGTAVKTKDEQALESAKSPSDLENTKDVSLANTNENEPAPIQFNPNVFMKYDACVDKDQAVK 836          
BLAST of EWM22106.1 vs. NCBI_GenBank
Match: gi|813133605|ref|XP_012197876.1| (hypothetical protein SPRG_03892 [Saprolegnia parasitica CBS 223.65] >gi|641537424|gb|KDO31277.1| hypothetical protein SPRG_03892 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 63.929 bits (154), Expect = 9.682e-9
Identity = 48/157 (30.57%), Postives = 71/157 (45.22%), Query Frame = 0
Query:    2 GPVEWKGIRGADNRCYVLDLVRLTPRDPNWIKEDEQDPGRGGTGVWERAKPVEGVPPLEEDFSAVIRPELLGLYVRSQVLALRQKAEETCVAKRRKEGKEKKEKKEGAGVEDGQGEDSGKEEEEATLDEEGKARLKEEEEELLERMKVNANAFLPLA 158
            GPVE KGI G+DNR Y+LDLVR+TP+D  +   +          V E ++           ++A++RPEL+ LY R +    +Q A++T    +  E K                 D  KE+E    DEE +A            ++ NAN  +P A
Sbjct:  510 GPVEAKGILGSDNRHYILDLVRITPKDYTFYNPESDT-------VTEASRASLLADADAGKYTALLRPELVQLYARWKANQAKQAAKKTTDEDKADEAKA----------------DEAKEDEAKADDEEVEA----------ASLRFNANVLMPYA 633          
BLAST of EWM22106.1 vs. NCBI_GenBank
Match: gi|325180398|emb|CCA14802.1| (eukaryotic translation initiation factor 3 subunit p [Albugo laibachii Nc14])

HSP 1 Score: 60.4622 bits (145), Expect = 1.459e-7
Identity = 49/176 (27.84%), Postives = 76/176 (43.18%), Query Frame = 0
Query:    2 GPVEWKGIRGADNRCYVLDLVRLTPRDPNWIKEDEQDPGRGGTGVWERAKPVEGVPPLEEDFSAVIRPELLGLYV---RSQVLALRQKAEETCVAKRRKEG------KEKKEKKEGAGVEDGQGEDSGKEEEEATLDEEGKARLKEEEEELLERMKVNANAFLPLAGVRDREQKCR 168
            GPVE KGI G+D R Y LDLVR+TP+D  + +             ++R          +E + A++RPEL+ LYV   R+Q+    + A         K        K++ E  E A  E+        E+  +T +      L   +E+    ++ N N F+      D+EQ  R
Sbjct:  672 GPVEAKGILGSDGRMYALDLVRITPKDSTYYEPQPLSNENADGLHFQRE---------DETYVALLRPELINLYVLWRRNQIRRANRDANNKSKELNSKASDNNNTLKKQIENSEEAPTENADEPALKPEKVPSTSESTKDVSLVSTKEDESAPIQFNPNVFMKYDACVDKEQVAR 838          
The following BLAST results are available for this feature:
BLAST of EWM22106.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102524|gb|EWM22106.1|6.767e-116100.00hypothetical protein Naga_102781g1 [Nannochloropsi... [more]
gi|1210511723|dbj|GAX29207.1|2.301e-1533.92protein TIF31 [Fistulifera solaris][more]
gi|1210515487|dbj|GAX25566.1|9.874e-1330.18protein TIF31 [Fistulifera solaris][more]
gi|224002356|ref|XP_002290850.1|1.624e-1236.99predicted protein [Thalassiosira pseudonana CCMP13... [more]
gi|1072235758|gb|OEU20486.1|1.793e-1235.26hypothetical protein FRACYDRAFT_180781 [Fragilario... [more]
gi|219112103|ref|XP_002177803.1|2.314e-1133.52predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|397636483|gb|EJK72292.1|1.625e-932.94hypothetical protein THAOC_06188, partial [Thalass... [more]
gi|635359293|emb|CCI50622.1|4.613e-928.33unnamed protein product [Albugo candida][more]
gi|813133605|ref|XP_012197876.1|9.682e-930.57hypothetical protein SPRG_03892 [Saprolegnia paras... [more]
gi|325180398|emb|CCA14802.1|1.459e-727.84eukaryotic translation initiation factor 3 subunit... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8594rna8594Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications