EWM22112.1, cds8551 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22112.1 vs. NCBI_GenBank
Match: gi|585102532|gb|EWM22112.1| (ubiquitin fusion degradaton [Nannochloropsis gaditana]) HSP 1 Score: 700.279 bits (1806), Expect = 0.000e+0 Identity = 345/345 (100.00%), Postives = 345/345 (100.00%), Query Frame = 0
Query: 1 MLFQLSLLPAEGNKSKQLPAGARVTHAGVLEFSAEDGRIGLPLKVRKSLEAEPEETREDGSRGMEKRMEGPGGEEGDSRESSAWGSGWKVRVKYVRLEKGTYAKVQPRTGNLWHVPELKGMLEMNLQNHATLSEGDVLQVWYRGRCFDLRVIGLEPTQAVTVIDTDLTVDVEVPEEQTERERVEKRLSTDAGGVKGQVVGGGGPPPRVSQSCESRGQEAGMEESSVNSGAKEEERRKSMIAAQLSKLAPEPDEGNGDWIALVVRKPDGSMISRRFLRSQPFQDVFRFVEATSVSSDHDRLHMTYRLVTRFPRRVFTVGETAAQSVGEVLGSEAGKRETLMYEACA 345
MLFQLSLLPAEGNKSKQLPAGARVTHAGVLEFSAEDGRIGLPLKVRKSLEAEPEETREDGSRGMEKRMEGPGGEEGDSRESSAWGSGWKVRVKYVRLEKGTYAKVQPRTGNLWHVPELKGMLEMNLQNHATLSEGDVLQVWYRGRCFDLRVIGLEPTQAVTVIDTDLTVDVEVPEEQTERERVEKRLSTDAGGVKGQVVGGGGPPPRVSQSCESRGQEAGMEESSVNSGAKEEERRKSMIAAQLSKLAPEPDEGNGDWIALVVRKPDGSMISRRFLRSQPFQDVFRFVEATSVSSDHDRLHMTYRLVTRFPRRVFTVGETAAQSVGEVLGSEAGKRETLMYEACA
Sbjct: 1 MLFQLSLLPAEGNKSKQLPAGARVTHAGVLEFSAEDGRIGLPLKVRKSLEAEPEETREDGSRGMEKRMEGPGGEEGDSRESSAWGSGWKVRVKYVRLEKGTYAKVQPRTGNLWHVPELKGMLEMNLQNHATLSEGDVLQVWYRGRCFDLRVIGLEPTQAVTVIDTDLTVDVEVPEEQTERERVEKRLSTDAGGVKGQVVGGGGPPPRVSQSCESRGQEAGMEESSVNSGAKEEERRKSMIAAQLSKLAPEPDEGNGDWIALVVRKPDGSMISRRFLRSQPFQDVFRFVEATSVSSDHDRLHMTYRLVTRFPRRVFTVGETAAQSVGEVLGSEAGKRETLMYEACA 345
BLAST of EWM22112.1 vs. NCBI_GenBank
Match: gi|298709434|emb|CBJ31340.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 115.546 bits (288), Expect = 6.472e-25 Identity = 125/423 (29.55%), Postives = 175/423 (41.37%), Query Frame = 0
Query: 1 MLFQLSLL-----PAEGNKSKQLPA-------GARVTHAGVLEFSAEDGRIGLPLKVRKSLEAEPEETREDGSRGMEKRMEGPGGEEGDSRESSAWGSGWKVRVKYVRLEKGTYAKVQPRTGNLWHVPELKGMLEMNLQNHATLSEGDVLQVWYRGRCFDLR-------------------VIGLEPTQAVTVIDTDLTVDVEVPE---EQTERERVEKRLSTDAGGVKGQVVG--GGGPPPRVSQSCESRGQEAGMEESSVNSGAKEE--------------------------------------ERRKSMIAAQLSKLAPEPDEGNGDWIALVVRKPDGSMISRRFLRSQPFQDVFRFVEATSVSSDHDRLH----MTYRLVTRFPRRVFTVGETAAQSVGEVLGSEAG---KRETLMYE 342
MLF+L+ P + ++ PA R THAGVLEF A++G IGLP KV SL + SR ++ + E E A V V+YVRL K T+A+V P T L V EL+ MLE N++NHATL+ GD L VW RG+ F L+ V+ L P VTVIDTD+ +++++PE EQ + + + R T + + G P +S RG G + SSV +G ++ E+ + QL + P +EG +R +G R FRF +A V D YRLV FPRRV T + +A G L EAG K+E+++ E
Sbjct: 117 MLFELTCTTSGAAPTSQQQPEKAPALQGGTITTTRTTHAGVLEFVADEGTIGLPRKVVLSLLGA--AAHQVPSRTSDENISANDDPENAKAERPAVEGLENVVVRYVRLAKATFARVVPETVGLSQVSELRAMLEHNMRNHATLTVGDHLSVWRRGKEFSLKSEDSHSPLTPEREPPLTMQVVELRPEPQVTVIDTDMEIELDLPEKAREQLQEKGAQDRAKTLRAHMGAATISSRGSSPTQSLSPPPSGRGYAVGGKGSSVAAGGRDTSTTGLSPMDDSESDDDSDLDSDDERSTPGGPKKGAFDLEKHRLAKFQQLPEEPPRDEEG---VFTCQLRTTEGKFTRR-----------FRFADALGVLLDFCEAQGGVPGQYRLVMPFPRRVLTRDDASA---GTTL-HEAGLTSKQESVILE 519
BLAST of EWM22112.1 vs. NCBI_GenBank
Match: gi|551675560|ref|XP_005840534.1| (hypothetical protein GUITHDRAFT_160865 [Guillardia theta CCMP2712] >gi|428184700|gb|EKX53554.1| hypothetical protein GUITHDRAFT_160865 [Guillardia theta CCMP2712]) HSP 1 Score: 109.383 bits (272), Expect = 2.367e-23 Identity = 91/316 (28.80%), Postives = 136/316 (43.04%), Query Frame = 0
Query: 25 THAGVLEFSAEDGRIGLPLKVRKSLEAEPEETREDGSRGMEKRMEGPGGEEGDSRESSAWGSGWKVRVKYVRLEKGTYAKVQPRTGNL----------------------WHVPELKGMLEMNLQNHATLSEGDVLQVWYRGRCFDLRVIGLEPTQAVTVIDTDLTVDV-----EVPEEQTERERVEKRLSTDAGGVKGQVVGGGGPPPRVSQSCESRGQEAGMEESSVNSGAKEEERRKSMIAAQLSKLAPEPDEGNGDWIALVVRKPDGSMISRRFLRSQPFQDVFRFVEATSVSSDHDRLHMTYRLVTRFPRR 313
TH GVLEF AE+ IG+P KV+ L G ++ E+ G +++ KYVRL KG +QPR + W +P L+G+L LQ +TL+ GDV++V + + F+L+V+ L+P AV ++DTD+ VD+ EV E + E R KR + K +++ + + E G EA EE + S+IA +L P+G I RRFLRS Q++F F++A S D Y + T FPR+
Sbjct: 132 THCGVLEFVAEEETIGIPPKVQMCL-----------------------GAVTEANETIEGGFSTRIQTKYVRLPKGESVSLQPRNKSFSDYMSSLDMKQSKPVYDSSRGKWVLPGLEGVLHTALQGLSTLTVGDVVKVVHNDKEFELQVLQLQPEDAVMLVDTDIQVDITPSKAEVDEMEAEEAR--KRREAEENEKKERIIADRKKSAQSRLTPEPAGNEA------------EEACQMSLIAVKL---------------------PNGKRIQRRFLRSSTLQNLFDFIDAES-----DFACPKYNVCTAFPRK 384
BLAST of EWM22112.1 vs. NCBI_GenBank
Match: gi|1117576501|ref|XP_019456777.1| (PREDICTED: uncharacterized protein LOC109357329 [Lupinus angustifolius] >gi|1102705158|gb|OIW04145.1| hypothetical protein TanjilG_00705 [Lupinus angustifolius]) HSP 1 Score: 108.227 bits (269), Expect = 2.493e-22 Identity = 69/182 (37.91%), Postives = 101/182 (55.49%), Query Frame = 0
Query: 1 MLFQLSLLPAEGNKSKQLPAGAR--VTHAGVLEFSAEDGRIGLPLKVRKSLEAEPEETREDGSRGMEKRMEGPGGEEGDSRESSAWGSGWKVRVKYVRLEKGTYAKVQPRTGNLWHVPELKGMLEMNLQNHATLSEGDVLQVWYRGRCFDLRVIGLEPTQAVTVIDTDLTVDVEVPEEQTER 180
+ FQLSL+ AEG+ Q + TH+GVLEF+A+DG +G+P V +L +E GS +E P V V+YV L KGTYAK+QP +P K +LE +L+ HATLS GD+L V Y + LRV+ L+P+ V+V++TD+ VD+ P++ +E+
Sbjct: 115 LYFQLSLVHAEGSSVTQGNYRDKQGTTHSGVLEFTADDGSVGIPPHVWNNLFSE-------GS------IESP-----------------LVEVRYVWLPKGTYAKLQPERVGFSDLPNHKAILETSLRQHATLSRGDILTVNYGELAYKLRVLELKPSSTVSVLETDIEVDIVDPDKASEK 266
BLAST of EWM22112.1 vs. NCBI_GenBank
Match: gi|357493375|ref|XP_003616976.1| (ubiquitin fusion degradation protein (UFD1), putative [Medicago truncatula] >gi|355518311|gb|AES99934.1| ubiquitin fusion degradation protein (UFD1), putative [Medicago truncatula]) HSP 1 Score: 106.301 bits (264), Expect = 1.255e-21 Identity = 70/186 (37.63%), Postives = 100/186 (53.76%), Query Frame = 0
Query: 1 MLFQLSLLPAEGNKSKQLPAGARV--THAGVLEFSAEDGRIGLPLKVRKSLEAEPEETREDGSRGMEKRMEGPGGEEGDSRESSAWGSGWKVRVKYVRLEKGTYAKVQPRTGNLWHVPELKGMLEMNLQNHATLSEGDVLQVWYRGRCFDLRVIGLEPTQAVTVIDTDLTVDVEVP---EEQTERE 181
M FQLSL EG+ S Q ++ TH+GVLEF+A++G +GLP V +L +E ME P + V+YV L KGTYAK+QP G +P K +LE +L+ HATLS+GD+ V Y LRV+ L+P+ +V+V++TD+ VD+ P EQT++
Sbjct: 115 MYFQLSLTHKEGSSSTQDTDKEKMGTTHSGVLEFTADEGSVGLPPHVWNNLFSEG------------CIMESP-----------------LIEVRYVWLPKGTYAKLQPERGGFSDLPNHKAILETSLRQHATLSQGDIFTVNYGKLEHKLRVLELKPSSSVSVLETDIEVDIVDPIDFSEQTDQH 271
BLAST of EWM22112.1 vs. NCBI_GenBank
Match: gi|1021548965|ref|XP_016165885.1| (uncharacterized protein LOC107608692 [Arachis ipaensis]) HSP 1 Score: 105.916 bits (263), Expect = 1.590e-21 Identity = 69/176 (39.20%), Postives = 98/176 (55.68%), Query Frame = 0
Query: 1 MLFQLSLLPAEGNKSKQLPAGAR--VTHAGVLEFSAEDGRIGLPLKVRKSLEAEPEETREDGSRGMEKRMEGPGGEEGDSRESSAWGSGWKVRVKYVRLEKGTYAKVQPRTGNLWHVPELKGMLEMNLQNHATLSEGDVLQVWYRGRCFDLRVIGLEPTQAVTVIDTDLTVDVEVP 174
M FQLSL+ EG+ S + + TH+GVLEF+AE+G +GLP V +L +E GM K P V V+YV L KGTYAK+QP +P K +LE +L+ HATLS+GD+L V Y + LRV+ L+P+++V+V++TD+ VD+ P
Sbjct: 115 MYFQLSLVHTEGSSSIEDIDKEKQGTTHSGVLEFTAEEGSVGLPPHVWSNLFSE----------GMVK---SP-----------------LVEVRYVWLPKGTYAKLQPERVGFSDLPNHKAILETSLRQHATLSQGDILTVNYGELVYKLRVLELKPSKSVSVLETDIEVDIVDP 260
BLAST of EWM22112.1 vs. NCBI_GenBank
Match: gi|356501298|ref|XP_003519462.1| (PREDICTED: uncharacterized protein LOC100777384 [Glycine max] >gi|734416590|gb|KHN38469.1| Ubiquitin fusion degradation protein 1 like [Glycine soja] >gi|947125189|gb|KRH73395.1| hypothetical protein GLYMA_02G271100 [Glycine max] >gi|1179666405|dbj|BAX25321.1| WBb98N11.19 [Glycine max]) HSP 1 Score: 105.531 bits (262), Expect = 2.206e-21 Identity = 66/183 (36.07%), Postives = 97/183 (53.01%), Query Frame = 0
Query: 1 MLFQLSLLPAEGNKSKQLP---AGARVTHAGVLEFSAEDGRIGLPLKVRKSLEAEPEETREDGSRGMEKRMEGPGGEEGDSRESSAWGSGWKVRVKYVRLEKGTYAKVQPRTGNLWHVPELKGMLEMNLQNHATLSEGDVLQVWYRGRCFDLRVIGLEPTQAVTVIDTDLTVDVEVPEEQTER 180
+ FQLSL+ E S Q R TH+GVLEF+A++G +GLP V +L +E ++ P V V+YV L KGTYAK+QP +P K +LE L+ HATLS+GD+L V Y + LRV+ L+P+ +V+V++TD+ VD+ P+ +E+
Sbjct: 117 LYFQLSLVHEESTSSIQTTDKEKQGRTTHSGVLEFTADEGSVGLPPHVWNNLFSE-------------GTLKAP-----------------LVEVRYVWLPKGTYAKLQPERVGFSDLPNHKAILETCLRQHATLSQGDILTVNYGELAYKLRVLELKPSSSVSVLETDIEVDIVDPDTSSEK 269
BLAST of EWM22112.1 vs. NCBI_GenBank
Match: gi|828296198|ref|XP_012568593.1| (PREDICTED: uncharacterized protein LOC101492821 [Cicer arietinum]) HSP 1 Score: 105.531 bits (262), Expect = 2.218e-21 Identity = 69/182 (37.91%), Postives = 98/182 (53.85%), Query Frame = 0
Query: 1 MLFQLSLLPAEGNKSKQLPAGAR--VTHAGVLEFSAEDGRIGLPLKVRKSLEAEPEETREDGSRGMEKRMEGPGGEEGDSRESSAWGSGWKVRVKYVRLEKGTYAKVQPRTGNLWHVPELKGMLEMNLQNHATLSEGDVLQVWYRGRCFDLRVIGLEPTQAVTVIDTDLTVDVEVPEEQTER 180
M FQLSL+ EG+ Q + TH+GVLEF+A++G +GLP V +L +E G ME P V V+YV L KGTYAK+QP +P K +LE +L+ HATLS+GD+ V Y + LRV+ L+P+ +V+V++TD+ VD+ P E E+
Sbjct: 137 MYFQLSLIQKEGSSGIQGTDEDKRGTTHSGVLEFTADEGSVGLPPHVWNNLFSE----------GF---MESP-----------------LVEVRYVWLPKGTYAKLQPERAGFSDLPNHKAILETSLRQHATLSKGDIFTVNYGELEYKLRVLELKPSSSVSVLETDIEVDIVDPIESLEK 288
BLAST of EWM22112.1 vs. NCBI_GenBank
Match: gi|1045405017|dbj|GAU14467.1| (hypothetical protein TSUD_250070 [Trifolium subterraneum]) HSP 1 Score: 104.76 bits (260), Expect = 3.796e-21 Identity = 67/182 (36.81%), Postives = 97/182 (53.30%), Query Frame = 0
Query: 1 MLFQLSLLPAEGNKSKQLPAG--ARVTHAGVLEFSAEDGRIGLPLKVRKSLEAEPEETREDGSRGMEKRMEGPGGEEGDSRESSAWGSGWKVRVKYVRLEKGTYAKVQPRTGNLWHVPELKGMLEMNLQNHATLSEGDVLQVWYRGRCFDLRVIGLEPTQAVTVIDTDLTVDVEVPEEQTER 180
M FQLSL+ + Q G A TH+GVLEF+A++G +GLP V +L +E +E P V V+YV L KGTYAK+QP +P K +LE +L+ HATLS+GD+ V Y + LRV+ L+P+ +V+V++TD+ VD+ P E +E+
Sbjct: 115 MYFQLSLIQKNDSSRIQGTDGEKAGTTHSGVLEFTADEGSVGLPPHVWNNLFSEA------------SIVESP-----------------MVEVRYVWLPKGTYAKLQPERAGFSDLPNHKAILETSLRQHATLSQGDIFTVNYGEHEYKLRVLELKPSASVSVLETDIEVDIVDPIETSEQ 267
BLAST of EWM22112.1 vs. NCBI_GenBank
Match: gi|593489493|ref|XP_007141614.1| (hypothetical protein PHAVU_008G210900g [Phaseolus vulgaris] >gi|561014747|gb|ESW13608.1| hypothetical protein PHAVU_008G210900g [Phaseolus vulgaris]) HSP 1 Score: 103.99 bits (258), Expect = 6.884e-21 Identity = 66/182 (36.26%), Postives = 98/182 (53.85%), Query Frame = 0
Query: 1 MLFQLSLLPAEGNKSKQLPAGAR--VTHAGVLEFSAEDGRIGLPLKVRKSLEAEPEETREDGSRGMEKRMEGPGGEEGDSRESSAWGSGWKVRVKYVRLEKGTYAKVQPRTGNLWHVPELKGMLEMNLQNHATLSEGDVLQVWYRGRCFDLRVIGLEPTQAVTVIDTDLTVDVEVPEEQTER 180
+ FQLSL+ E + S Q + TH+GVLEF+A++G +GLP V +L +E E P V V+YV L KGTYAK+QP +P K +LE +L+ HATLS+GD+L V Y + LRV+ L+P+ +V+V++TD+ VD+ P+ +E+
Sbjct: 115 IYFQLSLVHKESSSSIQDIDKEKQGTTHSGVLEFTADEGSVGLPPHVWNNLFSEGTS-------------ESP-----------------LVEVRYVWLPKGTYAKLQPERAGFSDLPNHKAILETSLRQHATLSQGDILIVNYGELAYKLRVLELKPSSSVSVLETDIEVDIVDPDTSSEK 266 The following BLAST results are available for this feature:
BLAST of EWM22112.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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