EWM22140.1, cds8522 (CDS) Nannochloropsis gaditana

Overview
NameEWM22140.1
Unique Namecds8522
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:240841..240928 -
Alignment locationKK037249.1:240292..240721 -
Alignment locationKK037249.1:239765..240203 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22140.1
Productcytochrome b5 domain-containing
Orig transcript idgnl|cribi|Naga_100064g17.4097.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:240841..240928 -
KK037249.1supercontigKK037249.1:240292..240721 -
KK037249.1supercontigKK037249.1:239765..240203 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: INTERPRO
TermDefinition
IPR001199Cyt_B5-like_heme/steroid-bd
Homology
BLAST of EWM22140.1 vs. NCBI_GenBank
Match: gi|585102561|gb|EWM22140.1| (cytochrome b5 domain-containing [Nannochloropsis gaditana])

HSP 1 Score: 647.506 bits (1669), Expect = 0.000e+0
Identity = 318/318 (100.00%), Postives = 318/318 (100.00%), Query Frame = 0
Query:    1 MRKRTAGQRSLDYMVLPTAEELVEELKKKQKGPSSRDILGRAMFGVAAFLVMITIGWQLGKLHRHKKGYSPSDLVKSRSAAKKAAASTLSPEPSRQSILSMVEAEEEALAPVPRLFTAADLQRAKDAYTTASPSTHPILLAIVGHVFDVSKGAQFYAPPPVEEAGGEGGGEGGEEGLREDVDGLSEEECRGVWRWVNFFKEKEDYPFVGRLVGMYFDGDGRPTRNYLNFRACVGRAGQGEGEEACATSWEKGKGHTVWCEGAGKVPRRRVKEGGREGQEARGRCVCVDLKDGEAHAEEGDGSLVVYPGCEPRSSLCTF 318
            MRKRTAGQRSLDYMVLPTAEELVEELKKKQKGPSSRDILGRAMFGVAAFLVMITIGWQLGKLHRHKKGYSPSDLVKSRSAAKKAAASTLSPEPSRQSILSMVEAEEEALAPVPRLFTAADLQRAKDAYTTASPSTHPILLAIVGHVFDVSKGAQFYAPPPVEEAGGEGGGEGGEEGLREDVDGLSEEECRGVWRWVNFFKEKEDYPFVGRLVGMYFDGDGRPTRNYLNFRACVGRAGQGEGEEACATSWEKGKGHTVWCEGAGKVPRRRVKEGGREGQEARGRCVCVDLKDGEAHAEEGDGSLVVYPGCEPRSSLCTF
Sbjct:    1 MRKRTAGQRSLDYMVLPTAEELVEELKKKQKGPSSRDILGRAMFGVAAFLVMITIGWQLGKLHRHKKGYSPSDLVKSRSAAKKAAASTLSPEPSRQSILSMVEAEEEALAPVPRLFTAADLQRAKDAYTTASPSTHPILLAIVGHVFDVSKGAQFYAPPPVEEAGGEGGGEGGEEGLREDVDGLSEEECRGVWRWVNFFKEKEDYPFVGRLVGMYFDGDGRPTRNYLNFRACVGRAGQGEGEEACATSWEKGKGHTVWCEGAGKVPRRRVKEGGREGQEARGRCVCVDLKDGEAHAEEGDGSLVVYPGCEPRSSLCTF 318          
BLAST of EWM22140.1 vs. NCBI_GenBank
Match: gi|762160798|ref|XP_011418616.1| (PREDICTED: neuferricin-like [Crassostrea gigas])

HSP 1 Score: 98.5969 bits (244), Expect = 2.058e-20
Identity = 71/264 (26.89%), Postives = 128/264 (48.48%), Query Frame = 0
Query:   92 EPSRQSILSMV--EAEEEALAPVP-----RLFTAADLQRAKDAYTTASPSTHPILLAIVGHVFDVSKGAQFYAPPPVEE--AGGEG-----GGEGGEEGLREDVDGLSEEECRGVWRWVNFFKEKEDYPFVGRLVGMYFDGDGRPTRNYLNFRACVGRAGQGEGEE--------ACATSWEKGKGHTVWC-EGAG-------KVPRRRVKEGGREGQEARGRCVCVDLK-------DGEAHAEEGDGSLVVYPGCEPRSSLCTF 318
            +P R+ ++S++    ++   + +      RLFT  +L++ +          + I LAI+G VFDV+KG + Y P        G  G      G+  ++GL+E++DGLS ++ +G+  WV+F+ ++  Y ++G+LVG ++D +G PT     F   + +A Q + E+         C +  + G    +WC E +G        VPR+  + G      ++ RC CV  K           + +  + ++ VY GCEP ++ C F
Sbjct:   27 KPQREKLISLIPTNIKDRVFSDISAHSKDRLFTLDELEKYR------GQDGNDIYLAILGQVFDVTKGRKHYGPGGTYHFFTGNAGTRAFVSGDFSQQGLKENLDGLSLKDIQGISGWVDFYHQQ--YTYIGKLVGHFYDENGNPTAAMDEFENLLEQAKQKQKEDDEDLKRFPPCNSETKVGVSRRIWCSENSGGIKRDWTGVPRQYFQPG-----NSQARCACVRDKGPPSSGGSSSNNGDLNNPNMKVYDGCEPTATSCNF 277          
BLAST of EWM22140.1 vs. NCBI_GenBank
Match: gi|762160800|ref|XP_011418617.1| (PREDICTED: neuferricin-like [Crassostrea gigas])

HSP 1 Score: 98.5969 bits (244), Expect = 3.608e-20
Identity = 74/257 (28.79%), Postives = 120/257 (46.69%), Query Frame = 0
Query:   92 EPSRQSILSMVEAE-------EEALAPVPRLFTAADLQRAKDAYTTASPSTHPILLAIVGHVFDVSKGAQFYAP-----PPVEEAGGEG--GGEGGEEGLREDVDGLSEEECRGVWRWVNFFKEKEDYPFVGRLVGMYFDGDGRPTRNYLNFRACVGRAGQGEGEEA--------CATSWEKGKGHTVWCEGAGKVPRRR---VKEGGREGQEARGRCVCVDLK----DGEAHAEEGDGS---LVVYPGCEPRSSLC 316
            +P R+ ++S++ A        +    P  RLFT  +L+R +            + LAI+G VFDV+KG++ Y P        E AG      G+   +GL E++DGLS E+ + +  WVNF+ +K  Y + G+L G ++D +G PT+   NF   + +A +              C T +E G G  + C       +R    V     +  ++  RC CV  K     G++ +  GD +   L VY GC+P ++ C
Sbjct:   39 KPQREKLISLLPANLKDRVFGDLGATPKDRLFTLNELERYRGQ----------VYLAILGQVFDVTKGSKHYGPGGTYHFFTEYAGTRAFASGDFSPQGLTENLDGLSLEDIQKISDWVNFYHKK--YTYKGKLTGHFYDKNGNPTKAMNNFERLLEQANKKPKYRDEDRKRFPRCITHYEVGFGRKMMCSKNSHGIKRDWIGVLRQYYQPGDSHTRCACVRDKGRPFSGDSSSNNGDLNHPYLKVYEGCKPTATSC 283          
BLAST of EWM22140.1 vs. NCBI_GenBank
Match: gi|298709278|emb|CBJ31216.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 97.8265 bits (242), Expect = 1.631e-19
Identity = 85/290 (29.31%), Postives = 116/290 (40.00%), Query Frame = 0
Query:   92 EPSRQSILSMVEAEEEALAPVPRLFTAADLQRAKDAYTTASPSTHPILLAIVGHVFDVSKGAQFYAPPPVEEAGGEGG----------------GEGGEEGLREDVDGLSEEECRGVWRWVNFFKEKEDYPFVGRLVGMYFDGDGRPTRNYLNFRACVGRAGQGEGEE---------ACATSWEKGKGHTVWCEGAGKVPRRRVKE-----GGREGQE-----------------------------------ARGRCVCVDLKDGEAHAEEGDGSLVVYPGCEPRSSLC 316
            EP R       +A   AL   PR+F+AA+L+        A  S    +L+I+G VFDVSKGA+ Y         G+GG                G   E GL +D+ GL   +C G+  W  F++  E Y   G L G ++D +G+PTR    F  C  R G  E E          +C + W   +G  VWCE   KVPR+   E     G RE  E                                    +GRC C D+     +A+  +  L+ Y GC P S+ C
Sbjct:   73 EPPRPMAEHTWDAAMLALGRGPRVFSAAELK--------AKGSGSRPMLSILGEVFDVSKGAKHY---------GKGGAYESFTGKDASRSFVSGNFTEAGLTDDLSGLEPSKCLGIKDWHEFYQNHEQYKKRGLLAGRFYDANGKPTRELAPFHKCP-RKGTKEKEREAAEKLLYPSCNSRWSAPEGGRVWCEDEKKVPRKFAPENVHGAGIREQGEGSSQPKSGATTQAAEAAGGGSGLSGEAEASTDAAKVKGRCSCFDVD----YAKANEHRLLSYGGCAPESNSC 340          
BLAST of EWM22140.1 vs. NCBI_GenBank
Match: gi|405977708|gb|EKC42144.1| (Cytochrome b5 domain-containing protein 2 [Crassostrea gigas])

HSP 1 Score: 96.6709 bits (239), Expect = 8.366e-19
Identity = 70/262 (26.72%), Postives = 127/262 (48.47%), Query Frame = 0
Query:   92 EPSRQSILSMV--EAEEEALAPVP-----RLFTAADLQRAKDAYTTASPSTHPILLAIVGHVFDVSKGAQFYAPPPVEE--AGGEG-----GGEGGEEGLREDVDGLSEEECRGVWRWVNFFKEKEDYPFVGRLVGMYFDGDGRPTRNYLNFRACVGRAGQGEGEE--------ACATSWEKGKGHTVWC-EGAG-------KVPRRRVKEGGREGQEARGRCVCVDLK-------DGEAHAEEGDGSLVVYPGCEPRSSLC 316
            +P R+ ++S++    ++   + +      RLFT  +L++ +          + I LAI+G VFDV+KG + Y P        G  G      G+  ++GL+E++DGLS ++ +G+  WV+F+ ++  Y ++G+LVG ++D +G PT     F   + +A Q + E+         C +  + G    +WC E +G        VPR+  + G      ++ RC CV  K           + +  + ++ VY GCEP ++ C
Sbjct:   27 KPQREKLISLIPTNIKDRVFSDISAHSKDRLFTLDELEKYR------GQDGNDIYLAILGQVFDVTKGRKHYGPGGTYHFFTGNAGTRAFVSGDFSQQGLKENLDGLSLKDIQGISGWVDFYHQQ--YTYIGKLVGHFYDENGNPTAAMDEFENLLEQAKQKQKEDDEDLKRFPPCNSETKVGVSRRIWCSENSGGIKRDWTGVPRQYFQPG-----NSQARCACVRDKGPPSSGGSSSNNGDLNNPNMKVYDGCEPTATSC 275          

HSP 2 Score: 80.4925 bits (197), Expect = 2.889e-13
Identity = 53/165 (32.12%), Postives = 81/165 (49.09%), Query Frame = 0
Query:  110 APVPRLFTAADLQRAKDAYTTASPSTHPILLAIVGHVFDVSKGAQFYAP-----PPVEEAGGEG--GGEGGEEGLREDVDGLSEEECRGVWRWVNFFKEKEDYPFVGRLVGMYFDGDGRPTRNYLNFRACVGRAGQGEGEEA--------CATSWEKGKGHTVWC 259
             P  RLFT  +L+R +            + LAI+G VFDV+KG++ Y P        E AG      G+   +GL E++DGLS E+ + +  WVNF+ +K  Y + G+L G ++D +G PT+   NF   + +A +              C T +E G G  + C
Sbjct:  277 TPKDRLFTLNELERYRGQ----------VYLAILGQVFDVTKGSKHYGPGGTYHFFTEYAGTRAFASGDFSPQGLTENLDGLSLEDIQKISDWVNFYHKK--YTYKGKLTGHFYDKNGNPTKAMNNFERLLEQANKKPKYRDEDRKRFPRCITHYEVGFGRKMMC 429          
BLAST of EWM22140.1 vs. NCBI_GenBank
Match: gi|241248528|ref|XP_002402930.1| (cytochrome b5 domain-containing protein, putative [Ixodes scapularis] >gi|215496427|gb|EEC06067.1| cytochrome b5 domain-containing protein, putative, partial [Ixodes scapularis])

HSP 1 Score: 93.5893 bits (231), Expect = 8.400e-19
Identity = 75/230 (32.61%), Postives = 107/230 (46.52%), Query Frame = 0
Query:  115 LFTAADLQRAKDAYTTASPSTHPILLAIVGHVFDVSKGAQFYAPP--PVEEAGGEGG-----GEGGEEGLREDVDGLSEEECRGVWRWVNFFKEKEDYPFVGRLVGMYFDGDGRPTRNYLNFRACVGRAGQGE--GEEA------CATSWEKGKGHTVWCEG-AGKVPRRR--VKEGGREGQEARGRCVCV-------DLKDGEAHAEEGD---GSLVVYPGCEPRSSLC 316
            +FTA +L++        +   H + LA++G ++DV KGA+ Y P       AG +       G+  E GL +D+ GLS+E      +WV+F+++  DY FVG+L G Y+  +G PT       A V RA + E   +EA      C + W +  G  VWC   +G + R    V     E +    RCVCV       D   G  H   GD     L  YPGC+P S  C
Sbjct:   17 VFTAEELRKYD-----GTSDVHGLYLALLGRIYDVQKGAEHYRPGGGYAHFAGRDASRAYVTGDFSEAGLTDDLQGLSDESLHTFTQWVDFYEK--DYRFVGKLAGRYYTNEGEPTEELQRVLAAVERAKEKEYLTKEASKVFPPCNSEWTQEGGTKVWCSTQSGGIQRSWAGVPRQFFEPETQVKRCVCVRTTGPPSDAAVGAKHNNRGDLDHPQLKEYPGCQPTSDTC 239          
BLAST of EWM22140.1 vs. NCBI_GenBank
Match: gi|961110374|ref|XP_014778686.1| (PREDICTED: neuferricin-like [Octopus bimaculoides] >gi|918308111|gb|KOF79604.1| hypothetical protein OCBIM_22029240mg [Octopus bimaculoides])

HSP 1 Score: 94.7449 bits (234), Expect = 1.055e-18
Identity = 67/220 (30.45%), Postives = 107/220 (48.64%), Query Frame = 0
Query:  115 LFTAADLQRAKDAYTTASPSTHPILLAIVGHVFDVSKGAQFYAP-PPV------EEAGGEGGGEGGEEGLREDVDGLSEEECRGVWRWVNFFKEKEDYPFVGRLVGMYFDGDGRPTRNYLNFRACVGRAGQGE-------GEEACATSWEKGKGHTVWC-EGAGKVPRRRV---KEGGREGQEARGRCVCVDLKDGEAHAEEGDGSLVVYPGCEPRSSLC 316
            +FT ++L +      T    + PI LA++G VFDVS G +FY P  P       + +G    G+  E+GL +D++G +  +  G+  WV+F+  KE+Y  +G + G ++  DG+PT+      A V +  + +           C    +   G  VWC + +G V R  V   +   R G ++   CVCV L     H E+   ++  YPGCEP S+ C
Sbjct:   92 VFTKSELSKY-----TGERESAPIYLAVLGQVFDVSSGRKFYGPGNPYSFFSGRDASGAFVTGDFTEKGLTDDIEGFTGNQLIGIGEWVDFY--KENYKHIGYVSGKFYTNDGKPTKVLERINAKVAKFNKQQEMDKLRASRPPCNIETDHKTGTKVWCTQKSGGVLRNWVGVPRLMYRPG-DSTLSCVCVQLSSLTEH-EKRSSAIRSYPGCEPTSTSC 302          
BLAST of EWM22140.1 vs. NCBI_GenBank
Match: gi|926635331|ref|XP_013783549.1| (PREDICTED: neuferricin-like [Limulus polyphemus])

HSP 1 Score: 93.2041 bits (230), Expect = 2.228e-18
Identity = 74/242 (30.58%), Postives = 102/242 (42.15%), Query Frame = 0
Query:  115 LFTAADLQRAKDAYTTASPSTHPILLAIVGHVFDVSKGAQFYAPPPVEEAGGEG------------GGEGGEEGLREDVDGLSEEECRGVWRWVNFFKEKEDYPFVGRLVGMYFDGDGRPTRNYLNFRACVGRAGQGEGEEA--------CATSWEKGKGHTVWCEGAG--------KVPRRRVKEGGREGQEARGRCVCVDL-------KDGEAHAEEGDGS---LVVYPGCEPRSSLCTF 318
            LFT  +LQ       +       + LA +G V+DV +GAQ Y P     +GG               G+  +EGL +DV GLS EE  G+  W+ F+    +Y +VG++VG Y+D DG PT+   +  A + +A   + +EA        C + W   KG  VWC             VPR+  + G     E   RC CV          D   H   GD     L  YP C P S  C+ 
Sbjct:   54 LFTPEELQLYDGGLDSKG-----LYLAFLGKVYDVREGAQHYKP-----SGGYSFFAGRDATRAYVTGDFSDEGLIDDVKGLSNEEMMGINNWMEFYDS--EYVYVGKVVGRYYDKDGHPTQALQDALAAIEKAKANKRDEAEEKQIFPPCNSEWSAEKGGRVWCSNKSGGIDRNWIGVPRKLYRPG-----ETEPRCACVRTSGPPSGSSDTTEHENRGDLDSPLLKEYPNCSPESVTCSL 278          
BLAST of EWM22140.1 vs. NCBI_GenBank
Match: gi|527207401|gb|EPS72689.1| (hypothetical protein M569_02068, partial [Genlisea aurea])

HSP 1 Score: 91.6633 bits (226), Expect = 3.140e-18
Identity = 77/224 (34.38%), Postives = 102/224 (45.54%), Query Frame = 0
Query:  113 PRLFTAADLQRAKDAYTTASPSTHPILLAIVGHVFDVSKGAQFYAPPPVEEAGGEG------------GGEGGEEGLREDVDGLSEEECRGVWRWVNFFKEKEDYPFVGRLVGMYFDGDGRPTRNYLNFRACVGRAGQ----GEGEEACATS----WEKGKGHTVWCEGAGKVPRRRVKEGGREGQEARGRCVCVDLKDGEAHAEEGDGSLVVYPGCEPRSSLC 316
            PRLFTA +L     +    + S  PILL I+G VFDVSKG   YA       GG               G   EEGL +D+ GL+  E + V  W +F+     Y + G+L G Y+D  G PT+      +   R  Q     + EEA ATS    W +  G  VWC+       +R  E    G+ ++ RC+C+  KD E     G   L VY GCEP  + C
Sbjct:   30 PRLFTAEEL-----SLYNGTDSRLPILLGIMGSVFDVSKGNTHYAI-----GGGYNHFSGRDASRAFVSGNFKEEGLTDDLTGLTSSEVKSVLDWRDFY--FRSYEYAGKLEGRYYDRYGNPTKFLKGAESKAARGAQLLEKQKIEEAKATSCNSKWSQEDGSEVWCDEGYPRLVQRPHEIAITGKASK-RCICI--KDDEL----GRPGLEVYNGCEPHETKC 234          
BLAST of EWM22140.1 vs. NCBI_GenBank
Match: gi|970890092|ref|XP_015110289.1| (PREDICTED: neuferricin [Diachasma alloeum])

HSP 1 Score: 91.2781 bits (225), Expect = 1.363e-17
Identity = 65/203 (32.02%), Postives = 95/203 (46.80%), Query Frame = 0
Query:  138 ILLAIVGHVFDVSKGAQFYAPPPVEEAGGEGG------------GEGGEEGLREDVDGLSEEECRGVWRWVNFFKEKEDYPFVGRLVGMYFDGDGRPTRNYLNFRACVGRAGQGEG--EEA------CATSWEKGKGHTVWCE-GAGKVPRRRV---KEGGREGQEARGRCVCVDLKDGEAHAEEGDGSLVVYPGCEPRSSLC 316
            + LAI+G V+DV++GA+ YAP      GG  G            GE  EE L +DV  L+  + + +  WV F+ EK  Y + G+LVG ++D +G PT  Y  F   V RA + +   EE       C   W+   G  VWC   +G + R      ++   +   A+ RC CV+L++ +    E  G    Y  C   SS C
Sbjct:   90 LYLAILGRVYDVTEGAKHYAP-----GGGYHGFIGKDATLAFITGEFNEENLSDDVSTLTNSQAKSIINWVKFYDEK--YVYKGKLVGRFYDKNGDPTAEYHEFMDKVERADEADTIQEEMKRKFPPCNVEWKPEDGTRVWCSPQSGGISRDWTGVPRQFFEKPSSAKNRCACVNLENSDFR--EHQGKFREYENCARLSSTC 283          
The following BLAST results are available for this feature:
BLAST of EWM22140.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102561|gb|EWM22140.1|0.000e+0100.00cytochrome b5 domain-containing [Nannochloropsis g... [more]
gi|762160798|ref|XP_011418616.1|2.058e-2026.89PREDICTED: neuferricin-like [Crassostrea gigas][more]
gi|762160800|ref|XP_011418617.1|3.608e-2028.79PREDICTED: neuferricin-like [Crassostrea gigas][more]
gi|298709278|emb|CBJ31216.1|1.631e-1929.31conserved unknown protein [Ectocarpus siliculosus][more]
gi|405977708|gb|EKC42144.1|8.366e-1926.72Cytochrome b5 domain-containing protein 2 [Crassos... [more]
gi|241248528|ref|XP_002402930.1|8.400e-1932.61cytochrome b5 domain-containing protein, putative ... [more]
gi|961110374|ref|XP_014778686.1|1.055e-1830.45PREDICTED: neuferricin-like [Octopus bimaculoides]... [more]
gi|926635331|ref|XP_013783549.1|2.228e-1830.58PREDICTED: neuferricin-like [Limulus polyphemus][more]
gi|527207401|gb|EPS72689.1|3.140e-1834.38hypothetical protein M569_02068, partial [Genlisea... [more]
gi|970890092|ref|XP_015110289.1|1.363e-1732.02PREDICTED: neuferricin [Diachasma alloeum][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8549rna8549Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications