EWM22148.1, cds8516 (CDS) Nannochloropsis gaditana
|
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22148.1 vs. NCBI_GenBank
Match: gi|585102569|gb|EWM22148.1| (rwp-rk domain-containing protein [Nannochloropsis gaditana]) HSP 1 Score: 2071.97 bits (5367), Expect = 0.000e+0 Identity = 1035/1035 (100.00%), Postives = 1035/1035 (100.00%), Query Frame = 0
Query: 1 MYTGQVLPAAPRQSLSCASDSTISITPDANTYSNPNIDASDCKTHSPPAAAAATACGKTTVSSMGCDTGGVKAAASSPAGAVTGTNTTSVDMLASEWLLSLAAGPVHQHPPQKSPRTSTLGSPSGVRAAASSAIGSTSDKVSSGAPGPVSSPTAQTKCSRFPLSPSGVHGPLSSASPSTVPSLCSTSPISSSPSLPQASTTMDVGVENEPLKSLRASGAANTASQPSSDGQTTRVRRTRKSRTSPDRIALPSPGTLPASPRSHTGPGLPLARPSLPSDPIDQTNAYGATTTRKEATGRVAPAVERSHGGFSPVPVQEKELQLLQSLQGRRPGCGGGEGGRVTPLQSVGLVRPIQPLKSQPSPTSPPDAKSPRPSTSTLASGGSSRSLKSVSLVELRRYFDRPIEDAARALGICSTLLKKICRRYHIKRWPYRQVKSLDRTLECLKVAMTTARASAGQPGHDPKEEARLCQQIRVLEARKVELIESSTTLGSVPVAMEGEDSTEGKGRRTEGGAEDGRSFQLPSPAFLAWSEGPSPPHAPLSAPSPIAPWTPVGATTTGGHKRKCSDGVGDGEGSRHRDATPDESTDDTNDVNNKSSGDFGHGLARAPSTTSMLHLMSINSPTFEKPASPALSVPSSVPPSFPSSVPPSFPSSFTTGPPGGYTGASGAISAPLQDSLPPSMPFHVFLPQATAAQQVSTHLHQGDAAAAAPAPPAAAVASLGAAAGTTTCGIGTSFAPPSFPPSFPPSFPPSFNPSCFYSIPNLYGGFNEGFPASAAVTQAGIQGGDKAGLSMDTLRAAYIQHMALARAQMRNMYPSPLPYVPSSQATSSGTAGGLGGQAPFLHEQQTFQLQQQQQLYQQQYYMLWLQQKRQLPMPMPAFAFPQTLTTDLTRPKTDTAAIAKEEPGSTGAQCETAVKTERGKEGFEEKAKAATDPVPARQARAPPPTIAAAGKGLGSPCTPQGEGGSNLGRSTTVHTSPQPEDDKEREQEEGERLVSKAKLDACPCPTDLGWKETGSAGKGVGEGVTDSAALPSQRQ 1035
MYTGQVLPAAPRQSLSCASDSTISITPDANTYSNPNIDASDCKTHSPPAAAAATACGKTTVSSMGCDTGGVKAAASSPAGAVTGTNTTSVDMLASEWLLSLAAGPVHQHPPQKSPRTSTLGSPSGVRAAASSAIGSTSDKVSSGAPGPVSSPTAQTKCSRFPLSPSGVHGPLSSASPSTVPSLCSTSPISSSPSLPQASTTMDVGVENEPLKSLRASGAANTASQPSSDGQTTRVRRTRKSRTSPDRIALPSPGTLPASPRSHTGPGLPLARPSLPSDPIDQTNAYGATTTRKEATGRVAPAVERSHGGFSPVPVQEKELQLLQSLQGRRPGCGGGEGGRVTPLQSVGLVRPIQPLKSQPSPTSPPDAKSPRPSTSTLASGGSSRSLKSVSLVELRRYFDRPIEDAARALGICSTLLKKICRRYHIKRWPYRQVKSLDRTLECLKVAMTTARASAGQPGHDPKEEARLCQQIRVLEARKVELIESSTTLGSVPVAMEGEDSTEGKGRRTEGGAEDGRSFQLPSPAFLAWSEGPSPPHAPLSAPSPIAPWTPVGATTTGGHKRKCSDGVGDGEGSRHRDATPDESTDDTNDVNNKSSGDFGHGLARAPSTTSMLHLMSINSPTFEKPASPALSVPSSVPPSFPSSVPPSFPSSFTTGPPGGYTGASGAISAPLQDSLPPSMPFHVFLPQATAAQQVSTHLHQGDAAAAAPAPPAAAVASLGAAAGTTTCGIGTSFAPPSFPPSFPPSFPPSFNPSCFYSIPNLYGGFNEGFPASAAVTQAGIQGGDKAGLSMDTLRAAYIQHMALARAQMRNMYPSPLPYVPSSQATSSGTAGGLGGQAPFLHEQQTFQLQQQQQLYQQQYYMLWLQQKRQLPMPMPAFAFPQTLTTDLTRPKTDTAAIAKEEPGSTGAQCETAVKTERGKEGFEEKAKAATDPVPARQARAPPPTIAAAGKGLGSPCTPQGEGGSNLGRSTTVHTSPQPEDDKEREQEEGERLVSKAKLDACPCPTDLGWKETGSAGKGVGEGVTDSAALPSQRQ
Sbjct: 1 MYTGQVLPAAPRQSLSCASDSTISITPDANTYSNPNIDASDCKTHSPPAAAAATACGKTTVSSMGCDTGGVKAAASSPAGAVTGTNTTSVDMLASEWLLSLAAGPVHQHPPQKSPRTSTLGSPSGVRAAASSAIGSTSDKVSSGAPGPVSSPTAQTKCSRFPLSPSGVHGPLSSASPSTVPSLCSTSPISSSPSLPQASTTMDVGVENEPLKSLRASGAANTASQPSSDGQTTRVRRTRKSRTSPDRIALPSPGTLPASPRSHTGPGLPLARPSLPSDPIDQTNAYGATTTRKEATGRVAPAVERSHGGFSPVPVQEKELQLLQSLQGRRPGCGGGEGGRVTPLQSVGLVRPIQPLKSQPSPTSPPDAKSPRPSTSTLASGGSSRSLKSVSLVELRRYFDRPIEDAARALGICSTLLKKICRRYHIKRWPYRQVKSLDRTLECLKVAMTTARASAGQPGHDPKEEARLCQQIRVLEARKVELIESSTTLGSVPVAMEGEDSTEGKGRRTEGGAEDGRSFQLPSPAFLAWSEGPSPPHAPLSAPSPIAPWTPVGATTTGGHKRKCSDGVGDGEGSRHRDATPDESTDDTNDVNNKSSGDFGHGLARAPSTTSMLHLMSINSPTFEKPASPALSVPSSVPPSFPSSVPPSFPSSFTTGPPGGYTGASGAISAPLQDSLPPSMPFHVFLPQATAAQQVSTHLHQGDAAAAAPAPPAAAVASLGAAAGTTTCGIGTSFAPPSFPPSFPPSFPPSFNPSCFYSIPNLYGGFNEGFPASAAVTQAGIQGGDKAGLSMDTLRAAYIQHMALARAQMRNMYPSPLPYVPSSQATSSGTAGGLGGQAPFLHEQQTFQLQQQQQLYQQQYYMLWLQQKRQLPMPMPAFAFPQTLTTDLTRPKTDTAAIAKEEPGSTGAQCETAVKTERGKEGFEEKAKAATDPVPARQARAPPPTIAAAGKGLGSPCTPQGEGGSNLGRSTTVHTSPQPEDDKEREQEEGERLVSKAKLDACPCPTDLGWKETGSAGKGVGEGVTDSAALPSQRQ 1035
BLAST of EWM22148.1 vs. NCBI_GenBank
Match: gi|553186882|ref|XP_005854508.1| (rwp-rk domain-containing protein [Nannochloropsis gaditana CCMP526] >gi|422294552|gb|EKU21852.1| rwp-rk domain-containing protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 1224.54 bits (3167), Expect = 0.000e+0 Identity = 621/635 (97.80%), Postives = 624/635 (98.27%), Query Frame = 0
Query: 64 MGCDTGGVKAAASSPAGAVTGTNTTSVDMLASEWLLSLAAGPVHQHPPQKSPRTSTLGSPSGVRAAASSAIGSTSDKVSSGAPGPVSSPTAQTKCSRFPLSPSGVHGPLSSASPSTVPSLCSTSPISSSPSLPQASTTMDVGVENEPLKSLRASGAANTASQPSSDGQTTRVRRTRKSRTSPDRIALPSPGTLPASPRSHTGPGLPLARPSLPSDPIDQTNAYGATTTRKEATGRVAPAVERSHGGFSPVPVQEKELQLLQSLQGRRPGCGGGEGGRVTPLQSVGLVRPIQPLKSQPSPTSPPDAKSPRPSTSTLASGGSSRSLKSVSLVELRRYFDRPIEDAARALGICSTLLKKICRRYHIKRWPYRQVKSLDRTLECLKVAMTTARASAGQPGHDPKEEARLCQQIRVLEARKVELIESSTTLGSVPVAMEGEDSTEGKGRRTEGGAEDGRSFQLPSPAFLAWSEGPSPPHAPLSAPSPIAPWTPVGATTTGGHKRKCSDGVGDGEGSRHRDATPDESTDDTNDVNNKSSGDFGHGLARAPSTTSMLHLMSINSPTFEKPASPALSVPSSVPPSFPSSVPPSFPSSFTTGPPGGYTGASGAISAPLQDSLPPSMPFHVFLPQATAAQQVSTH 698
MGCDTGGVKAAASSPAGAVTGTNTTSVDMLASEWLLSLAAGPVHQHPPQKSPRTSTLGSPSGVRAAASSAIGS SDK SSGAPGPVSSPTAQTKCSRFPLSPSGVHGPLSSASPSTVPSLCSTSPISSSPS PQASTTMDVGVENEPLKSLRASGAANTASQPSSDGQTTRVRRTRKSRTSPDRIALPSPGTLPASPRSH GPGLPLARPSLPSDPIDQT+AYGATTTRKEATGRVAPAVERSHGGFSPVPVQEKELQLLQSLQGRRPGCGGGEGGRVTPLQSVGLVRPIQPLKSQP PTSPP KSPRPS STLASGGSSRSLKSVSLVELRRYFDRPIEDAARALGICSTLLKKICRRYHIKRWPYRQVKSLDRTLECLKVAMTTARASAGQPGHDPKEEARLCQQIRVLEARKVELIESSTTLGSVP+A+EGEDSTEGKGRRTEGGAEDGRSFQLPSPAFLAWSEGPSPPHAPLSAPSPIAPWTPVGATTTGGHKRKCSDGVGDGEGSRHRDATPDESTDDTNDVNNKSSGDFGHGLARAPSTTSMLHLMSINSPTFEKPASPALSVPSSVPPSFPSSVPPSFPSSFTTGPPGGYTGASGAISAPLQDSLPPSMPFHVFLPQATAAQQ H
Sbjct: 1 MGCDTGGVKAAASSPAGAVTGTNTTSVDMLASEWLLSLAAGPVHQHPPQKSPRTSTLGSPSGVRAAASSAIGSMSDKASSGAPGPVSSPTAQTKCSRFPLSPSGVHGPLSSASPSTVPSLCSTSPISSSPSFPQASTTMDVGVENEPLKSLRASGAANTASQPSSDGQTTRVRRTRKSRTSPDRIALPSPGTLPASPRSHPGPGLPLARPSLPSDPIDQTDAYGATTTRKEATGRVAPAVERSHGGFSPVPVQEKELQLLQSLQGRRPGCGGGEGGRVTPLQSVGLVRPIQPLKSQPFPTSPPGTKSPRPSASTLASGGSSRSLKSVSLVELRRYFDRPIEDAARALGICSTLLKKICRRYHIKRWPYRQVKSLDRTLECLKVAMTTARASAGQPGHDPKEEARLCQQIRVLEARKVELIESSTTLGSVPLAVEGEDSTEGKGRRTEGGAEDGRSFQLPSPAFLAWSEGPSPPHAPLSAPSPIAPWTPVGATTTGGHKRKCSDGVGDGEGSRHRDATPDESTDDTNDVNNKSSGDFGHGLARAPSTTSMLHLMSINSPTFEKPASPALSVPSSVPPSFPSSVPPSFPSSFTTGPPGGYTGASGAISAPLQDSLPPSMPFHVFLPQATAAQQGFPH 635
BLAST of EWM22148.1 vs. NCBI_GenBank
Match: gi|635361259|emb|CCI10645.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 92.8189 bits (229), Expect = 6.027e-16 Identity = 55/147 (37.41%), Postives = 83/147 (56.46%), Query Frame = 0
Query: 367 DAKSPRPSTSTLASGGSSRSL-KSVSLVELRRYFDRPIEDAARALGICSTLLKKICRRYHIKRWPYRQVKSLDRTLECLKVAMTTARASAGQPGHDPKEEARLCQQIRVLEARKVELIES------STTLGSVPVAMEG-EDSTEGK 505
D + + ++ SG S SL K +SL ELR +FDRPI + A+ GIC TL+KKICRR IKRWP+RQ++SL +++ L+ AM +A + E+ R QI L R+ +I + + TLG A++ ED++ +
Sbjct: 85 DIRGEQDTSVCTESGRSKNSLTKQISLDELRAHFDRPIIEVAKKFGICITLMKKICRRNGIKRWPHRQIRSLTKSIAALEAAMLSA---------NETEQERYQDQIMNLRRRRESVIANPNKFSMAQTLGDQQYAVQNKEDASRSR 222
BLAST of EWM22148.1 vs. NCBI_GenBank
Match: gi|669166402|ref|XP_008618763.1| (hypothetical protein SDRG_14417 [Saprolegnia diclina VS20] >gi|530729591|gb|EQC27833.1| hypothetical protein SDRG_14417 [Saprolegnia diclina VS20]) HSP 1 Score: 91.2781 bits (225), Expect = 1.691e-15 Identity = 49/124 (39.52%), Postives = 72/124 (58.06%), Query Frame = 0
Query: 388 KSVSLVELRRYFDRPIEDAARALGICSTLLKKICRRYHIKRWPYRQVKSLDRTLECLKVAMTTARASAGQPGHDPKEEARLCQQIRVLEARKVELIESSTTLGSVPVAMEGEDSTEGKGRRTEG 511
K +S+ ELR +FD+PI + AR GIC TL+KK+CRR IKRWP+RQ++SL +++ ++ AM TA S E + +QIR L ++ +I SV VA + E + RT+G
Sbjct: 96 KLISIDELRDHFDQPIVEVARHFGICITLMKKVCRRNGIKRWPHRQIRSLTKSISSMEAAMMTANVS---------EREKYEEQIRSLVLKRDAVIADPNKEVSVSVA-KASAKDEKRSPRTDG 209
BLAST of EWM22148.1 vs. NCBI_GenBank
Match: gi|570938217|gb|ETP03474.1| (hypothetical protein F441_19545 [Phytophthora parasitica CJ01A1]) HSP 1 Score: 91.6633 bits (226), Expect = 1.780e-15 Identity = 41/96 (42.71%), Postives = 60/96 (62.50%), Query Frame = 0
Query: 388 KSVSLVELRRYFDRPIEDAARALGICSTLLKKICRRYHIKRWPYRQVKSLDRTLECLKVAMTTARASAGQPGHDPKEEARLCQQIRVLEARKVELI 483
K +S+ ELR +FDRPI D A+ GIC TL+KKICRR IKRWP+RQ++SL +++ ++ AM +A S E + QI L+ ++ +I
Sbjct: 137 KHISIEELRAHFDRPIIDVAKDFGICITLMKKICRRNGIKRWPHRQIRSLSKSIASMEAAMLSAHGS---------EREKYRDQIVNLKMKRESVI 223
BLAST of EWM22148.1 vs. NCBI_GenBank
Match: gi|675209641|ref|XP_008913705.1| (hypothetical protein PPTG_17267 [Phytophthora parasitica INRA-310] >gi|568006410|gb|ETL80669.1| hypothetical protein L917_18855 [Phytophthora parasitica] >gi|568086043|gb|ETN00939.1| hypothetical protein PPTG_17267 [Phytophthora parasitica INRA-310] >gi|970646219|gb|KUF86460.1| NLP2 protein [Phytophthora nicotianae] >gi|970649356|gb|KUF88653.1| NLP2 protein [Phytophthora nicotianae]) HSP 1 Score: 91.6633 bits (226), Expect = 1.828e-15 Identity = 41/96 (42.71%), Postives = 60/96 (62.50%), Query Frame = 0
Query: 388 KSVSLVELRRYFDRPIEDAARALGICSTLLKKICRRYHIKRWPYRQVKSLDRTLECLKVAMTTARASAGQPGHDPKEEARLCQQIRVLEARKVELI 483
K +S+ ELR +FDRPI D A+ GIC TL+KKICRR IKRWP+RQ++SL +++ ++ AM +A S E + QI L+ ++ +I
Sbjct: 137 KHISIEELRAHFDRPIIDVAKDFGICITLMKKICRRNGIKRWPHRQIRSLSKSIASMEAAMLSAHGS---------EREKYRDQIVNLKMKRESVI 223
BLAST of EWM22148.1 vs. NCBI_GenBank
Match: gi|570314465|gb|ETO62413.1| (hypothetical protein F444_19674 [Phytophthora parasitica P1976]) HSP 1 Score: 91.6633 bits (226), Expect = 1.844e-15 Identity = 41/96 (42.71%), Postives = 60/96 (62.50%), Query Frame = 0
Query: 388 KSVSLVELRRYFDRPIEDAARALGICSTLLKKICRRYHIKRWPYRQVKSLDRTLECLKVAMTTARASAGQPGHDPKEEARLCQQIRVLEARKVELI 483
K +S+ ELR +FDRPI D A+ GIC TL+KKICRR IKRWP+RQ++SL +++ ++ AM +A S E + QI L+ ++ +I
Sbjct: 137 KHISIEELRAHFDRPIIDVAKDFGICITLMKKICRRNGIKRWPHRQIRSLSKSIASMEAAMLSAHGS---------EREKYRDQIVNLKMKRESVI 223
BLAST of EWM22148.1 vs. NCBI_GenBank
Match: gi|567976898|gb|ETL27412.1| (hypothetical protein L916_19037 [Phytophthora parasitica]) HSP 1 Score: 91.6633 bits (226), Expect = 1.844e-15 Identity = 41/96 (42.71%), Postives = 60/96 (62.50%), Query Frame = 0
Query: 388 KSVSLVELRRYFDRPIEDAARALGICSTLLKKICRRYHIKRWPYRQVKSLDRTLECLKVAMTTARASAGQPGHDPKEEARLCQQIRVLEARKVELI 483
K +S+ ELR +FDRPI D A+ GIC TL+KKICRR IKRWP+RQ++SL +++ ++ AM +A S E + QI L+ ++ +I
Sbjct: 137 KHISIEELRAHFDRPIIDVAKDFGICITLMKKICRRNGIKRWPHRQIRSLSKSIASMEAAMLSAHGS---------EREKYRDQIVNLKMKRESVI 223
BLAST of EWM22148.1 vs. NCBI_GenBank
Match: gi|567948226|gb|ETK73979.1| (hypothetical protein L915_19144 [Phytophthora parasitica]) HSP 1 Score: 91.6633 bits (226), Expect = 1.844e-15 Identity = 41/96 (42.71%), Postives = 60/96 (62.50%), Query Frame = 0
Query: 388 KSVSLVELRRYFDRPIEDAARALGICSTLLKKICRRYHIKRWPYRQVKSLDRTLECLKVAMTTARASAGQPGHDPKEEARLCQQIRVLEARKVELI 483
K +S+ ELR +FDRPI D A+ GIC TL+KKICRR IKRWP+RQ++SL +++ ++ AM +A S E + QI L+ ++ +I
Sbjct: 137 KHISIEELRAHFDRPIIDVAKDFGICITLMKKICRRNGIKRWPHRQIRSLSKSIASMEAAMLSAHGS---------EREKYRDQIVNLKMKRESVI 223
BLAST of EWM22148.1 vs. NCBI_GenBank
Match: gi|566007177|gb|ETI30088.1| (hypothetical protein F443_22790 [Phytophthora parasitica P1569] >gi|566010721|gb|ETI33632.1| hypothetical protein F443_19709 [Phytophthora parasitica P1569]) HSP 1 Score: 91.6633 bits (226), Expect = 1.894e-15 Identity = 41/96 (42.71%), Postives = 60/96 (62.50%), Query Frame = 0
Query: 388 KSVSLVELRRYFDRPIEDAARALGICSTLLKKICRRYHIKRWPYRQVKSLDRTLECLKVAMTTARASAGQPGHDPKEEARLCQQIRVLEARKVELI 483
K +S+ ELR +FDRPI D A+ GIC TL+KKICRR IKRWP+RQ++SL +++ ++ AM +A S E + QI L+ ++ +I
Sbjct: 137 KHISIEELRAHFDRPIIDVAKDFGICITLMKKICRRNGIKRWPHRQIRSLSKSIASMEAAMLSAHGS---------EREKYRDQIVNLKMKRESVI 223 The following BLAST results are available for this feature:
BLAST of EWM22148.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
|