EWM22164.1, cds8506 (CDS) Nannochloropsis gaditana

Overview
NameEWM22164.1
Unique Namecds8506
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:191219..191227 -
Alignment locationKK037249.1:189919..190777 -
Alignment locationKK037249.1:189602..189764 -
Alignment locationKK037249.1:189131..189371 -

Link to JBrowse

Properties
Property NameValue
Start range189131
Start range.
Protein idEWM22164.1
Productsterol esterase tgl1
Partialtrue
Orig transcript idgnl|cribi|Naga_100434g5.2380.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:191219..191227 -
KK037249.1supercontigKK037249.1:189919..190777 -
KK037249.1supercontigKK037249.1:189602..189764 -
KK037249.1supercontigKK037249.1:189131..189371 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006629lipid metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR006693AB_hydrolase_lipase
IPR029058AB_hydrolase
IPR000073AB_hydrolase_1
Homology
BLAST of EWM22164.1 vs. NCBI_GenBank
Match: gi|585102587|gb|EWM22164.1| (sterol esterase tgl1, partial [Nannochloropsis gaditana])

HSP 1 Score: 863.988 bits (2231), Expect = 0.000e+0
Identity = 424/424 (100.00%), Postives = 424/424 (100.00%), Query Frame = 0
Query:    1 MHKTRTHTHALARPSAPFKPLVLYLHLLRPHSETMVYTDVLVDWAHLLYLVCFLTAAKAVGFFIVTVYAYFPFPALLDRFYLASQGLQSWFSYQLGGAAPGSAGKASPNGNRERLLAESLVEGTPFILETHTALTRDGFVLVLHRLVPKTSGQDGPGAPGQATSSSTSETYVEDRGPQRARSWRKASGENNGRKSGGGSQSLQQHIPTSSFFSKGPGSAAAPAVAPALPSAAVPTATGTGSNAVTPSTLRRPPLLMVHALMQDSESFLCGGEEHSLALVLAKAGFDVWLGNNRGNRYSHKHVSLSPSQDAYWNFSIDELARFDVPAMVDYVLRATGQEKLAYVGFSQGSAQAFAAFTTDLAMAKKVSIFLALAAPPRAKGLSSSYLSALVESNPRFIYLVFGRHSMLSSTLMWMKVGEGREGGR 424
            MHKTRTHTHALARPSAPFKPLVLYLHLLRPHSETMVYTDVLVDWAHLLYLVCFLTAAKAVGFFIVTVYAYFPFPALLDRFYLASQGLQSWFSYQLGGAAPGSAGKASPNGNRERLLAESLVEGTPFILETHTALTRDGFVLVLHRLVPKTSGQDGPGAPGQATSSSTSETYVEDRGPQRARSWRKASGENNGRKSGGGSQSLQQHIPTSSFFSKGPGSAAAPAVAPALPSAAVPTATGTGSNAVTPSTLRRPPLLMVHALMQDSESFLCGGEEHSLALVLAKAGFDVWLGNNRGNRYSHKHVSLSPSQDAYWNFSIDELARFDVPAMVDYVLRATGQEKLAYVGFSQGSAQAFAAFTTDLAMAKKVSIFLALAAPPRAKGLSSSYLSALVESNPRFIYLVFGRHSMLSSTLMWMKVGEGREGGR
Sbjct:    1 MHKTRTHTHALARPSAPFKPLVLYLHLLRPHSETMVYTDVLVDWAHLLYLVCFLTAAKAVGFFIVTVYAYFPFPALLDRFYLASQGLQSWFSYQLGGAAPGSAGKASPNGNRERLLAESLVEGTPFILETHTALTRDGFVLVLHRLVPKTSGQDGPGAPGQATSSSTSETYVEDRGPQRARSWRKASGENNGRKSGGGSQSLQQHIPTSSFFSKGPGSAAAPAVAPALPSAAVPTATGTGSNAVTPSTLRRPPLLMVHALMQDSESFLCGGEEHSLALVLAKAGFDVWLGNNRGNRYSHKHVSLSPSQDAYWNFSIDELARFDVPAMVDYVLRATGQEKLAYVGFSQGSAQAFAAFTTDLAMAKKVSIFLALAAPPRAKGLSSSYLSALVESNPRFIYLVFGRHSMLSSTLMWMKVGEGREGGR 424          
BLAST of EWM22164.1 vs. NCBI_GenBank
Match: gi|298711375|emb|CBJ32519.1| (lipase [Ectocarpus siliculosus])

HSP 1 Score: 202.216 bits (513), Expect = 2.999e-57
Identity = 99/167 (59.28%), Postives = 129/167 (77.25%), Query Frame = 0
Query:  251 RPPLLMVHALMQDSESFLCGGEEHSLALVLAKAGFDVWLGNNRGNRYSHKHVSLSP-SQDAYWNFSIDELARFDVPAMVDYVLRATGQEKLAYVGFSQGSAQAFAAFTTDLAMAKKVSIFLALAAPPRAKGLSSSYLSALVESNPRFIYLVFGRHSMLSSTLMWMKV 416
            RP +L++H LMQDSE+ LCGG +H+L L LA AGFDV+LGN RGNRYSHKH+  SP + DAYW+FSIDELAR+D P M+D+VL+ +GQ +L Y+GFSQG+AQAFAAF++D  +  KV +F+AL+   RA  LS S L +LV++N RFIYL+FGR  ML   L W ++
Sbjct:   67 RPAVLLMHGLMQDSEALLCGGRDHALGLRLAAAGFDVFLGNARGNRYSHKHLRRSPVTSDAYWDFSIDELARYDTPTMIDHVLKVSGQTQLCYIGFSQGTAQAFAAFSSDPDLQAKVFLFVALSPAVRANHLSKSLLLSLVQANLRFIYLLFGRRRMLPVALTWQRM 233          
BLAST of EWM22164.1 vs. NCBI_GenBank
Match: gi|873228987|emb|CEM14629.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 187.963 bits (476), Expect = 6.166e-50
Identity = 136/384 (35.42%), Postives = 182/384 (47.40%), Query Frame = 0
Query:   50 LVCFLTAAKAVGFFIVTVYAYFPFPALLDRFYLAS-QGLQSWFSYQLGGAAPGSAGKASPNGNRERLLAES---LVEGTPFILETHTALTRDGFVLVLHRLVPKTSGQDGPG-------APGQATSSSTSETYVEDRGPQRARSWRKASGENNGRKSGGGSQSLQQHIPTSSFFSKGPGSAAAPAVAPALPSAAVPTATGTGSNAVTPSTLRRPPLLMVHALMQDSESFLCGGEEHSLALVLAKAGFDVWLGNNRGNRYSHKHVSLSPSQDAYWNFSIDELARFDVPAMVDYVLRATGQEKLAYVGFSQGSAQAFAAFTTDLAMAKKVSIFLALAAPPRAKGLSS------SYLSALVESNPRFIYLVFGRHSMLSSTLMWMKV 416
            + C L+    V   ++T Y  FPF  LLD  Y  S  G+   FS +L              G R+  L+ S   L+E     +E H A T DGFVLVLHR+VP   G + P         PG  +S STS        P R                           P +     GPG+AA   V     S       G G            PLL +H LM   E ++C  +E SL + LA+ G+DVWL NNRGN+YS KH         YW+FSIDELAR+DVP  VD VLR T   +  YVGFS G+AQ FAA +T  A+ ++++ F+ALA   R K LS+      + +  L+  + R  +LVFG+ +MLS+T +W ++
Sbjct:   28 IFCLLSFEFVVRTLVLTFYKLFPFRRLLDILYDQSVSGVSMLFSKRL-------------EGPRQPQLSSSTVELLEDAGLNVEDHFAETPDGFVLVLHRIVPPNQGINTPTNTNMHGLQPGWGSSRSTSL-------PSRTD-------------------------PFADLL--GPGTAAVTNVTTESDSLVSRRRGGDGG----------LPLLFMHGLMMSDECWVCN-KEISLPIYLARKGYDVWLANNRGNKYSWKHRFFKRDDKHYWDFSIDELARYDVPTCVDLVLRETRATQCIYVGFSNGTAQMFAALSTQPALNRRIATFIALAPACRLKTLSTKEGSHIALVYPLLTFSKRAFFLVFGKKAMLSTTDVWKRM 353          
BLAST of EWM22164.1 vs. NCBI_GenBank
Match: gi|831789161|ref|XP_012758971.1| (hypothetical protein SAMD00019534_000840, partial [Acytostelium subglobosum LB1] >gi|735859603|dbj|GAM16909.1| hypothetical protein SAMD00019534_000840, partial [Acytostelium subglobosum LB1])

HSP 1 Score: 184.496 bits (467), Expect = 6.185e-50
Identity = 91/201 (45.27%), Postives = 132/201 (65.67%), Query Frame = 0
Query:  215 GPGSAAAPAVAPALPSAAVPTATGTG-SNAVTPSTLRRPPLLMVHALMQDSESFLCGGE-EHSLALVLAKAGFDVWLGNNRGNRYSHKHVSLSPSQDAYWNFSIDELARFDVPAMVDYVLRATGQEKLAYVGFSQGSAQAFAAFTTDLAMAKKVSIFLALAAPPRAKGLSSSYLSALVESNPRFIYLVFGRHSMLSSTLMW 413
            GP +  +P  +P     A P   G   S    PS   +P +L++H  MQ SE++LC  +   SL  +LA AG+DVWLGNNRGN+YS KH +LSP Q+ +WN+S+DEL R+D+P++VD+++  T  + L Y+GFSQG+AQ +AA +T+ ++A KV +F+ALA     KG S+  + +L  S P FI+L+FG+ SML ST  W
Sbjct:   77 GPRAFTSPLDSPP----ASPRDLGVSHSELFEPSG--KPAVLIMHGFMQTSEAWLCRSDPNDSLPFILADAGYDVWLGNNRGNKYSFKHTTLSPDQEKFWNWSLDELVRYDLPSIVDFIIDRTKLKSLTYIGFSQGTAQGWAALSTNTSLASKVDLFIALAPVATVKGFSNPMIDSLARSRPDFIFLLFGKKSMLPSTTFW 271          
BLAST of EWM22164.1 vs. NCBI_GenBank
Match: gi|330799986|ref|XP_003288021.1| (hypothetical protein DICPUDRAFT_92027 [Dictyostelium purpureum] >gi|325081980|gb|EGC35478.1| hypothetical protein DICPUDRAFT_92027 [Dictyostelium purpureum])

HSP 1 Score: 184.882 bits (468), Expect = 1.767e-49
Identity = 79/164 (48.17%), Postives = 122/164 (74.39%), Query Frame = 0
Query:  251 RPPLLMVHALMQDSESFLCGGE-EHSLALVLAKAGFDVWLGNNRGNRYSHKHVSLSPSQDAYWNFSIDELARFDVPAMVDYVLRATGQEKLAYVGFSQGSAQAFAAFTTDLAMAKKVSIFLALAAPPRAKGLSSSYLSALVESNPRFIYLVFGRHSMLSSTLMW 413
            +P ++++H  MQ SE++LC  + + SL  +LA AGFDVWLGNNRGN+YS KH   +P+Q+ +WN+S+DEL R+D P++V+++   TG + ++Y+GFSQG+AQ +AA +T+ A+AKK+++F+ALA     KG S+  + +L  S P FI+L+FG+ SML ST+ W
Sbjct:  173 KPVVVIMHGFMQTSEAWLCRSDPKDSLPFILADAGFDVWLGNNRGNKYSFKHTQYTPNQEGFWNWSLDELVRYDFPSIVNFICDRTGAKSISYIGFSQGTAQGWAALSTNTAVAKKINLFIALAPVSTVKGFSNPMIDSLARSRPDFIFLLFGKKSMLPSTIFW 336          
BLAST of EWM22164.1 vs. NCBI_GenBank
Match: gi|1013935721|gb|KYQ89423.1| (carboxylic ester hydrolase [Dictyostelium lacteum])

HSP 1 Score: 183.341 bits (464), Expect = 2.969e-49
Identity = 80/168 (47.62%), Postives = 117/168 (69.64%), Query Frame = 0
Query:  250 RRPPLLMVHALMQDSESFLC-GGEEHSLALVLAKAGFDVWLGNNRGNRYSHKHVSLSPSQDAYWNFSIDELARFDVPAMVDYVLRATGQEKLAYVGFSQGSAQAFAAFTTDLAMAKKVSIFLALAAPPRAKGLSSSYLSALVESNPRFIYLVFGRHSMLSSTLMWMKV 416
             RP +L++H  MQ SE++LC    E SL  +LA AGFDVWLGNNRGN+YS KH   +P+Q+ +WN+S+DEL R+D P++VD++   T    + Y+GFSQG+AQ +A  +T+  +AKK+++F+ALA     KG S+  + +L  S P FI+L+FG+ SML ST+ W  +
Sbjct:  148 NRPVVLIMHGFMQTSEAWLCRSNPEDSLPFILADAGFDVWLGNNRGNKYSFKHTKYAPNQEGFWNWSLDELVRYDFPSIVDFITDRTQARSITYIGFSQGTAQGWATLSTNTNIAKKINLFIALAPVSTVKGFSNPMIDSLARSRPDFIFLLFGKKSMLPSTIFWRNI 315          
BLAST of EWM22164.1 vs. NCBI_GenBank
Match: gi|1160558935|ref|XP_020432019.1| (carboxylic ester hydrolase [Polysphondylium pallidum PN500] >gi|281205709|gb|EFA79898.1| carboxylic ester hydrolase [Polysphondylium pallidum PN500])

HSP 1 Score: 181.03 bits (458), Expect = 1.692e-48
Identity = 78/164 (47.56%), Postives = 119/164 (72.56%), Query Frame = 0
Query:  251 RPPLLMVHALMQDSESFLC-GGEEHSLALVLAKAGFDVWLGNNRGNRYSHKHVSLSPSQDAYWNFSIDELARFDVPAMVDYVLRATGQEKLAYVGFSQGSAQAFAAFTTDLAMAKKVSIFLALAAPPRAKGLSSSYLSALVESNPRFIYLVFGRHSMLSSTLMW 413
            +P +L++H  MQ SE++LC     +SL  +LA AGFDVWLGNNRGN+YS KH + +P Q+ +WN+S+DEL R+D+P+MV+++   T  + ++Y+GFSQG+AQ +AA +T+  +A K+++F+ALA     KG S+  + +L  S P FI+L+FG+ SML ST+ W
Sbjct:  133 KPAVLIMHGFMQTSEAWLCRSNPNNSLPFILADAGFDVWLGNNRGNKYSFKHTTYTPDQEKFWNWSLDELVRYDLPSMVNFITNRTKLQSISYIGFSQGTAQGWAALSTNTDLAAKINLFVALAPVSTVKGFSNPMIDSLARSRPDFIFLLFGKKSMLPSTIFW 296          
BLAST of EWM22164.1 vs. NCBI_GenBank
Match: gi|66817030|ref|XP_642461.1| (carboxylic ester hydrolase [Dictyostelium discoideum AX4] >gi|60470556|gb|EAL68535.1| carboxylic ester hydrolase [Dictyostelium discoideum AX4])

HSP 1 Score: 181.8 bits (460), Expect = 1.229e-47
Identity = 77/164 (46.95%), Postives = 121/164 (73.78%), Query Frame = 0
Query:  251 RPPLLMVHALMQDSESFLCGGE-EHSLALVLAKAGFDVWLGNNRGNRYSHKHVSLSPSQDAYWNFSIDELARFDVPAMVDYVLRATGQEKLAYVGFSQGSAQAFAAFTTDLAMAKKVSIFLALAAPPRAKGLSSSYLSALVESNPRFIYLVFGRHSMLSSTLMW 413
            +P ++++H  MQ SE++LC  + + SL  +LA AGFDVWLGNNRGN+YS KH + +P+Q+ +WN+S+DEL R+D P++V+++   TG   ++Y+GFSQG+AQ +AA +T+  ++KK+++F+ALA     KG S+  + +L  S P FI+L+FG+ SML ST+ W
Sbjct:  215 KPVVVIMHGFMQTSEAWLCRSDPKDSLPFILADAGFDVWLGNNRGNKYSFKHTNYTPNQEGFWNWSLDELVRYDYPSIVNFICERTGAPSISYIGFSQGTAQGWAALSTNTVISKKINLFIALAPVATVKGFSNPMIDSLARSRPDFIFLLFGKKSMLPSTIFW 378          
BLAST of EWM22164.1 vs. NCBI_GenBank
Match: gi|1149604247|gb|OON11286.1| (hypothetical protein BSLG_00085 [Batrachochytrium salamandrivorans])

HSP 1 Score: 181.03 bits (458), Expect = 2.738e-47
Identity = 106/304 (34.87%), Postives = 159/304 (52.30%), Query Frame = 0
Query:  118 ESLVEGTPFILETHTALTRDGFVLVLHRLVPKTSGQD----GPGAPGQATSSSTSETYVEDRGPQRARSWRKASGENNGRKSGGGSQSLQQHIPTSSFFSKGPGSAAAPAVAPALPSAAVPTATGTGSNAVTPSTLRRPPLLMVHALMQDSESFLCGGE-EHSLALVLAKAGFDVWLGNNRGNRYSHKHVSLSPSQDAYWNFSIDELARFDVPAMVDYVLRATGQEKLAYVGFSQGSAQAFAAFTTDLAMAKKVSIFLALAAPPRAKGLSSSYLSALVESNPRFIYLVFGRHSMLSSTLMWMKV 416
            E  V    F  +TH   T+DG++L LHR +P +  +      P +  QAT +S  ET      P  + +   ++  NNG ++                     GS    A AP                        +P +L+ H  +  SE ++C  + + SLAL LA+AG+DVWLGN RGN+YS KH  L P+ + +WNFS+D+LA  D+P  VDY+LR TG   L+Y+GFSQG+AQ F+A + +  +  ++++FLALA   +  GL +  + +LV  +P  IYL+FGR ++LSS L W  +
Sbjct:   82 EDFVSHWEFPFQTHYVTTKDGYILTLHR-IPSSKAESKAAHSPTSHFQATQTSECET-----SPNESSN-SGSTPLNNGNRTSNS------------------GSINRTAYAP------------------------KPVVLLWHGFLMCSEVWVCTPDPKGSLALTLAEAGYDVWLGNTRGNKYSCKHRKLRPTDEEFWNFSMDQLALCDLPDSVDYILRLTGVPSLSYIGFSQGTAQCFSALSLNQQLNSQINLFLALAPATKPHGLENKTIDSLVHVSPEVIYLLFGRKALLSSALFWQSI 336          
BLAST of EWM22164.1 vs. NCBI_GenBank
Match: gi|595766862|ref|XP_007261974.1| (alpha/beta-hydrolase [Fomitiporia mediterranea MF3/22] >gi|393222538|gb|EJD08022.1| alpha/beta-hydrolase [Fomitiporia mediterranea MF3/22])

HSP 1 Score: 177.563 bits (449), Expect = 5.103e-47
Identity = 85/168 (50.60%), Postives = 117/168 (69.64%), Query Frame = 0
Query:  250 RRPPLLMVHALMQDSESFLC-GGEEHSLALVLAKAGFDVWLGNNRGNRYSHKHVSLSPSQDAYWNFSIDELARFDVPAMVDYVLRATGQEKLAYVGFSQGSAQAFAAFTTDLAMAKKVSIFLALAAPPRAKGLSSSYLSALVESNPRFIYLVFGRHSMLSSTLMWMKV 416
            R+P + + H L+  SE F+C    E SL LVLA+AG+DVWLGNNRGN+YS KH SL+P   A+WNF IDE A  D+P  + Y+L ATG++ L+YVGFSQG+AQAFAA + + ++ KKV +F+ALA      GLS+  +  L++++P  +YL FGR S+L ST  W  +
Sbjct:  128 RKPVVYLHHGLLMCSEIFMCLTSAERSLPLVLAEAGYDVWLGNNRGNKYSRKHTSLNPHSQAFWNFGIDEYAMHDIPDSIAYILEATGEKSLSYVGFSQGTAQAFAALSINPSLNKKVDVFVALAPAMSPPGLSAPLVDGLMKASPALMYLFFGRRSILHSTTTWQSI 295          
The following BLAST results are available for this feature:
BLAST of EWM22164.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102587|gb|EWM22164.1|0.000e+0100.00sterol esterase tgl1, partial [Nannochloropsis gad... [more]
gi|298711375|emb|CBJ32519.1|2.999e-5759.28lipase [Ectocarpus siliculosus][more]
gi|873228987|emb|CEM14629.1|6.166e-5035.42unnamed protein product [Vitrella brassicaformis C... [more]
gi|831789161|ref|XP_012758971.1|6.185e-5045.27hypothetical protein SAMD00019534_000840, partial ... [more]
gi|330799986|ref|XP_003288021.1|1.767e-4948.17hypothetical protein DICPUDRAFT_92027 [Dictyosteli... [more]
gi|1013935721|gb|KYQ89423.1|2.969e-4947.62carboxylic ester hydrolase [Dictyostelium lacteum][more]
gi|1160558935|ref|XP_020432019.1|1.692e-4847.56carboxylic ester hydrolase [Polysphondylium pallid... [more]
gi|66817030|ref|XP_642461.1|1.229e-4746.95carboxylic ester hydrolase [Dictyostelium discoide... [more]
gi|1149604247|gb|OON11286.1|2.738e-4734.87hypothetical protein BSLG_00085 [Batrachochytrium ... [more]
gi|595766862|ref|XP_007261974.1|5.103e-4750.60alpha/beta-hydrolase [Fomitiporia mediterranea MF3... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8533rna8533Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications