EWM22180.1, cds8500 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22180.1 vs. NCBI_GenBank
Match: gi|585102607|gb|EWM22180.1| (prefoldin subunit 3 [Nannochloropsis gaditana]) HSP 1 Score: 440.654 bits (1132), Expect = 1.561e-156 Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0 Query: 1 MAARDTGTMEQNVDIQKHLSVGKNPRGIPTATFIEDVGAFLQTLGGVPVETAIGAFNELYGKCKTLENSLGRVKLSMKAKIPEIEKTLELVHVLEGKQAEGEALTTHYNLADTIYAKAEVACHGRVCLWLGANVMLEYSYEEAKGVLETSLRNAKEKLKTTNEDLEHLKNQTTTIEVNMARLFNYDVKRRKALRQEEGAADKTGGGKGRGNGNPK 215 MAARDTGTMEQNVDIQKHLSVGKNPRGIPTATFIEDVGAFLQTLGGVPVETAIGAFNELYGKCKTLENSLGRVKLSMKAKIPEIEKTLELVHVLEGKQAEGEALTTHYNLADTIYAKAEVACHGRVCLWLGANVMLEYSYEEAKGVLETSLRNAKEKLKTTNEDLEHLKNQTTTIEVNMARLFNYDVKRRKALRQEEGAADKTGGGKGRGNGNPK Sbjct: 1 MAARDTGTMEQNVDIQKHLSVGKNPRGIPTATFIEDVGAFLQTLGGVPVETAIGAFNELYGKCKTLENSLGRVKLSMKAKIPEIEKTLELVHVLEGKQAEGEALTTHYNLADTIYAKAEVACHGRVCLWLGANVMLEYSYEEAKGVLETSLRNAKEKLKTTNEDLEHLKNQTTTIEVNMARLFNYDVKRRKALRQEEGAADKTGGGKGRGNGNPK 215
BLAST of EWM22180.1 vs. NCBI_GenBank
Match: gi|553189609|ref|XP_005855038.1| (prefoldin subunit 3 [Nannochloropsis gaditana CCMP526] >gi|422294023|gb|EKU21323.1| prefoldin subunit 3 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 315.079 bits (806), Expect = 5.195e-107 Identity = 158/174 (90.80%), Postives = 158/174 (90.80%), Query Frame = 0 Query: 1 MAARDTGTMEQNVDIQKHLSVGKNPRGIPTATFI----------------EDVGAFLQTLGGVPVETAIGAFNELYGKCKTLENSLGRVKLSMKAKIPEIEKTLELVHVLEGKQAEGEALTTHYNLADTIYAKAEVACHGRVCLWLGANVMLEYSYEEAKGVLETSLRNAKEKL 158 MAARDTGTMEQNVDIQKHLSVGKNPRGIPTATFI EDVGAFLQTLGGVPVETAIGAFNELYGKCKTLENSLGRVKLSMKAKIPEIEKTLELVHVLEGKQAEGEALTTHYNLADTIYAKAEVACHGRVCLWLGANVMLEYSYEEAKGVLETSLRNAKEKL Sbjct: 1 MAARDTGTMEQNVDIQKHLSVGKNPRGIPTATFIPPQPLSTTRFLTCAQKEDVGAFLQTLGGVPVETAIGAFNELYGKCKTLENSLGRVKLSMKAKIPEIEKTLELVHVLEGKQAEGEALTTHYNLADTIYAKAEVACHGRVCLWLGANVMLEYSYEEAKGVLETSLRNAKEKL 174
BLAST of EWM22180.1 vs. NCBI_GenBank
Match: gi|298714035|emb|CBJ27267.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 215.698 bits (548), Expect = 1.181e-67 Identity = 102/173 (58.96%), Postives = 132/173 (76.30%), Query Frame = 0 Query: 19 LSVGKNPRGIPTATFIEDVGAFLQTLGGVPVETAIGAFNELYGKCKTLENSLGRVKLSMKAKIPEIEKTLELVHVLEGKQAEGEALTTHYNLADTIYAKAEVACHGRVCLWLGANVMLEYSYEEAKGVLETSLRNAKEKLKTTNEDLEHLKNQTTTIEVNMARLFNYDVKRRK 191 L KNPRGIP FI+DV FL LG VET IGAFNELY K K +E+++ + K SMK K+PEIE++LELV L+ +Q + E + T+Y+LADT++AKAE+ C GRVC+WLGA+VM+EY+Y+EA +LE +L A EK KTT EDLE L+NQ+ T+EVNMARL+NYDV RR+ Sbjct: 20 LVTRKNPRGIPEVVFIDDVVQFLARLGVEEVETPIGAFNELYSKYKLMESNMDKAKQSMKDKVPEIERSLELVRHLQERQDKEETVKTNYSLADTVFAKAELKCDGRVCIWLGASVMVEYTYKEALELLERNLATALEKKKTTQEDLEFLRNQSITVEVNMARLYNYDVLRRR 192
BLAST of EWM22180.1 vs. NCBI_GenBank
Match: gi|676386961|ref|XP_009036759.1| (hypothetical protein AURANDRAFT_26059 [Aureococcus anophagefferens] >gi|323452902|gb|EGB08775.1| hypothetical protein AURANDRAFT_26059 [Aureococcus anophagefferens]) HSP 1 Score: 186.422 bits (472), Expect = 2.061e-56 Identity = 94/182 (51.65%), Postives = 120/182 (65.93%), Query Frame = 0 Query: 19 LSVGKNPRGIPTATFIEDVGAFLQTLGGVPVETAIGAFNELYGKCKTLENSLGRVKLSMKAKIPEIEKTLELVHVLEGKQAEGEALTTHYNLADTIYAKAEVACHGRVCLWLGANVMLEYSYEEAKGVLETSLRNAKEKLKTTNEDLEHLKNQTTTIEVNMARLFNYDVKRRKALRQEEGAA 200 LS NPRGIP FI+ V + L VET IGAFNEL+ K K LE R K+SMK KIPEI KTL+LV L+ K E +HY+L++ IY +A + G VCLWLGANVM+EY Y+EA +L SL+NAK + +EDL+ L++Q T+EVNMAR+FNYDVKRR+ ++ E A Sbjct: 5 LSGNTNPRGIPHVAFIDSVESTLAATTDGTVETLIGAFNELHQKFKILEGHKARTKMSMKQKIPEITKTLQLVEHLKAKHEAEEDFMSHYSLSEMIYGRATITPTGNVCLWLGANVMVEYPYDEALDILTLSLKNAKLRKDICDEDLDMLRDQIITVEVNMARVFNYDVKRRRDEKKPEAGA 186
BLAST of EWM22180.1 vs. NCBI_GenBank
Match: gi|695369473|ref|XP_009514063.1| (hypothetical protein PHYSODRAFT_320679 [Phytophthora sojae] >gi|348686974|gb|EGZ26788.1| hypothetical protein PHYSODRAFT_320679 [Phytophthora sojae]) HSP 1 Score: 177.948 bits (450), Expect = 7.005e-53 Identity = 82/170 (48.24%), Postives = 118/170 (69.41%), Query Frame = 0 Query: 23 KNPRGIPTATFIEDVGAFLQTLGGVPVETAIGAFNELYGKCKTLENSLGRVKLSMKAKIPEIEKTLELVHVLEGKQAEGEALTTHYNLADTIYAKAEVACH-GRVCLWLGANVMLEYSYEEAKGVLETSLRNAKEKLKTTNEDLEHLKNQTTTIEVNMARLFNYDVKRRK 191 +NPRGIP+A F++ V AF+ G +E +GA ++Y K K +E SL + + + K KIP+ +K L++V L K+ EGE L T +NLAD +YAKA V C G+VC+WLGA VM+EY YE+A+ +LE ++ +A EKL EDL L++Q T EVN+AR+FN+DV+RR+ Sbjct: 28 RNPRGIPSAVFVDSVEAFMDACGVKNIEPLVGALQQMYSKYKFMETSLQKNRETFKRKIPDTQKDLDMVRHLIAKRDEGETLQTQFNLADNVYAKAAVDCSVGKVCIWLGAQVMVEYPYEDAQDLLEKNVASATEKLGQIEEDLSFLRDQIITTEVNIARIFNHDVRRRR 197
BLAST of EWM22180.1 vs. NCBI_GenBank
Match: gi|301123435|ref|XP_002909444.1| (prefoldin subunit 3, putative [Phytophthora infestans T30-4] >gi|262100206|gb|EEY58258.1| prefoldin subunit 3, putative [Phytophthora infestans T30-4]) HSP 1 Score: 176.022 bits (445), Expect = 4.401e-52 Identity = 80/170 (47.06%), Postives = 118/170 (69.41%), Query Frame = 0 Query: 23 KNPRGIPTATFIEDVGAFLQTLGGVPVETAIGAFNELYGKCKTLENSLGRVKLSMKAKIPEIEKTLELVHVLEGKQAEGEALTTHYNLADTIYAKAEVACH-GRVCLWLGANVMLEYSYEEAKGVLETSLRNAKEKLKTTNEDLEHLKNQTTTIEVNMARLFNYDVKRRK 191 +NPRGIP+A F++ V F+ G +E +GA ++Y K K +E SL + + + K KIP+ +K L++V L K+ EGE L T +NL+D +YAKA V C+ G+VC+WLGA VM+EY YEEA+ +LE ++ +A E+L EDL L++Q T EVN+AR+FN+DV+RR+ Sbjct: 28 RNPRGIPSAVFVDSVDTFMNACGVKNIEPLVGALQQMYSKYKFMETSLQKNRETFKRKIPDTQKDLDMVRHLIAKRDEGETLQTQFNLSDNVYAKASVDCNVGKVCIWLGAQVMVEYPYEEAQELLEKNVASATERLGQIEEDLSFLRDQIITTEVNIARIFNHDVRRRR 197
BLAST of EWM22180.1 vs. NCBI_GenBank
Match: gi|1214703805|gb|OWZ15759.1| (Prefoldin subunit 3 [Phytophthora megakarya]) HSP 1 Score: 176.022 bits (445), Expect = 5.750e-52 Identity = 82/170 (48.24%), Postives = 115/170 (67.65%), Query Frame = 0 Query: 23 KNPRGIPTATFIEDVGAFLQTLGGVPVETAIGAFNELYGKCKTLENSLGRVKLSMKAKIPEIEKTLELVHVLEGKQAEGEALTTHYNLADTIYAKAEVACH-GRVCLWLGANVMLEYSYEEAKGVLETSLRNAKEKLKTTNEDLEHLKNQTTTIEVNMARLFNYDVKRRK 191 +NPRGIP A F+E V AF+ G +E +GA ++Y K K +E SL + + + K KIP+ +K L++V L K+ G+ L T +NLAD +YAKA V C G+VC+WLGA VM+EY YEEA+ +LE ++ A EKL EDL L++Q T EVN+AR+FN+DV+RR+ Sbjct: 30 RNPRGIPAAVFVEAVDAFMAACGVATIEPLVGALQQMYSKYKFMETSLQKNRETFKRKIPDTQKDLDMVRHLIVKRDAGDTLNTQFNLADNVYAKAAVDCSVGKVCIWLGAQVMVEYPYEEAQDLLEKNVATATEKLAQIEEDLSFLRDQIITTEVNIARIFNHDVRRRR 199
BLAST of EWM22180.1 vs. NCBI_GenBank
Match: gi|953495843|emb|CEG42739.1| (prefoldin subunit 3 [Plasmopara halstedii]) HSP 1 Score: 174.866 bits (442), Expect = 1.143e-51 Identity = 80/170 (47.06%), Postives = 117/170 (68.82%), Query Frame = 0 Query: 23 KNPRGIPTATFIEDVGAFLQTLGGVPVETAIGAFNELYGKCKTLENSLGRVKLSMKAKIPEIEKTLELVHVLEGKQAEGEALTTHYNLADTIYAKAEVACH-GRVCLWLGANVMLEYSYEEAKGVLETSLRNAKEKLKTTNEDLEHLKNQTTTIEVNMARLFNYDVKRRK 191 +NPRGIP++ F++ V +++ G +E +GA ++Y K K +E +L + + + K KIPE +K L++V L K+ EGE L T +NLAD +YA A V C G+VC+WLGA VM+EYSYEEA+ +LE ++ A EKL EDL L++Q T EVN+AR+FN+DV+RR+ Sbjct: 24 RNPRGIPSSVFVDSVESYMTECGVKTIEPLVGALQQMYSKYKFMETNLQKNRETFKRKIPETQKDLDMVQHLMTKRDEGETLQTQFNLADNVYANASVDCSLGKVCIWLGAQVMVEYSYEEAQELLEKNMATASEKLAQIEEDLSFLRDQIITTEVNIARIFNHDVRRRR 193
BLAST of EWM22180.1 vs. NCBI_GenBank
Match: gi|675209395|ref|XP_008913582.1| (hypothetical protein PPTG_17473 [Phytophthora parasitica INRA-310] >gi|568006530|gb|ETL80786.1| hypothetical protein L917_18742 [Phytophthora parasitica] >gi|568086134|gb|ETN01027.1| hypothetical protein PPTG_17473 [Phytophthora parasitica INRA-310] >gi|570968664|gb|ETP31783.1| hypothetical protein F442_19373 [Phytophthora parasitica P10297]) HSP 1 Score: 173.711 bits (439), Expect = 3.912e-51 Identity = 79/170 (46.47%), Postives = 115/170 (67.65%), Query Frame = 0 Query: 23 KNPRGIPTATFIEDVGAFLQTLGGVPVETAIGAFNELYGKCKTLENSLGRVKLSMKAKIPEIEKTLELVHVLEGKQAEGEALTTHYNLADTIYAKAEVACH-GRVCLWLGANVMLEYSYEEAKGVLETSLRNAKEKLKTTNEDLEHLKNQTTTIEVNMARLFNYDVKRRK 191 +NPRGIP+A F++ V F+ G +E +GA ++Y K K +E SL + + + K KIP+ +K L +V L K+ EGE L T +NL+D +YAKA V C G+VC+WLGA +M+EY Y+EA+ +LE ++ A EKL EDL L++Q T EVN+AR+FN+DV+RR+ Sbjct: 28 RNPRGIPSAVFVDSVDTFMDACGVKNIEPLVGALQQMYSKYKFMETSLQKNRETFKRKIPDTQKDLNMVRHLIAKRDEGETLQTQFNLSDNVYAKASVDCSVGKVCIWLGAQIMVEYPYDEAQELLEKNVATATEKLGQIEEDLSFLRDQIITTEVNIARIFNHDVRRRR 197
BLAST of EWM22180.1 vs. NCBI_GenBank
Match: gi|566010816|gb|ETI33727.1| (hypothetical protein F443_19598 [Phytophthora parasitica P1569]) HSP 1 Score: 173.711 bits (439), Expect = 4.268e-51 Identity = 79/170 (46.47%), Postives = 115/170 (67.65%), Query Frame = 0 Query: 23 KNPRGIPTATFIEDVGAFLQTLGGVPVETAIGAFNELYGKCKTLENSLGRVKLSMKAKIPEIEKTLELVHVLEGKQAEGEALTTHYNLADTIYAKAEVACH-GRVCLWLGANVMLEYSYEEAKGVLETSLRNAKEKLKTTNEDLEHLKNQTTTIEVNMARLFNYDVKRRK 191 +NPRGIP+A F++ V F+ G +E +GA ++Y K K +E SL + + + K KIP+ +K L +V L K+ EGE L T +NL+D +YAKA V C G+VC+WLGA +M+EY Y+EA+ +LE ++ A EKL EDL L++Q T EVN+AR+FN+DV+RR+ Sbjct: 28 RNPRGIPSAVFVDSVDTFMDACGVKNIEPLVGALQQMYSKYKFMETSLQKNRETFKRKIPDTQKDLNMVRHLIAKRDEGETLQTQFNLSDNVYAKASVDCSVGKVCIWLGAQIMVEYPYDEAQELLEKNVATATEKLGQIEEDLSFLRDQIITTEVNIARIFNHDVRRRR 197 The following BLAST results are available for this feature:
BLAST of EWM22180.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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