EWM22181.1, cds8497 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22181.1 vs. NCBI_GenBank
Match: gi|553189600|ref|XP_005855035.1| (cell surface [Nannochloropsis gaditana CCMP526] >gi|422294020|gb|EKU21320.1| cell surface [Nannochloropsis gaditana CCMP526] >gi|585102608|gb|EWM22181.1| Six-bladed beta-propeller, TolB [Nannochloropsis gaditana]) HSP 1 Score: 2944.84 bits (7633), Expect = 0.000e+0 Identity = 1440/1440 (100.00%), Postives = 1440/1440 (100.00%), Query Frame = 0
Query: 1 MVEAWLQRSREPRFFAVSFSWRFGFLIAIVIFIFLAEAGKAQGETLPLYATKIASSNNEEDTVQTLAIDADGNAIVAGSFRSESVTVADTATLANQGPPGTSDVFVAHFKADGSLNWAANWGGNHDDVVVDVAMDPSGASAYVVGVFKSPKISFSPVGSETNDDVLENIIYDADTLPTNVFIVKVSSAGKVLWRTQTGDKNIASVSVDSDSQRVYVTGTFPSYLATRNDDDTWKALESSLPLGVVDDDMTDDGGPEETGPVEQAGGSPSTSIWAENPFHKEGTATPAPDDGYSTDMYVDYYSSVTGELVDGTVFTGDLDEIPTDLVLEAGTTTPFVTGFSESGRVRLAPNLALTNTDSPLPGDHYGFVAKLDPTGKLVVWGKTLGLALGSNPLRLAVDSTRTTAPWTMLYVTGTFGSPEMMALMESTAGRIGSSLFPSLVRMNANTGEIVWVKGLPPPQQVGVDYTGAITVAGTFKASVSFSYDIPNLIARSANGDMYLARMDGHSQGEVVQVERFGGGSTGKYTVNDLAVDPAGNVYWAGNFTGGAIKFADTMLSTPGSGNIDGFFGRVAHPLPGRTAAPQKVPVPTMAPTRRPTTPSPTHSPTTVEWAKAQALLTKPPTKAPTRRPTRAPTSRPTPRPTMSPTAQSNTPAPSFPPTQRPTRMPTQEPVPVRNTLSPTKAPVTPLSIDSLSSGTLPTLLDTSGSSAAVAGTNVDMVLTYAGSQTTILEFQRSLYQLFRPYATSYATFIPSVAALNRRRMAGSSPITPASTLSLQELEYQASQTRDGRSYERSLRVNRCTDTKTAKFSLPFYIEAKNRAATAKILNLLEDMINGVSAMDSGRNIFDNTVLCSVSYSALSASPLIQADDSFAAPQMVPATSGVETMGADGAACQDKKGIQAFSLIMGIVLGLLGVMLSVGVFYVVQSRRLQRPARVTEPQSQPPRSFFTGFKGLTPKTRASLSATGSGAIASPEELTRQLEAEKERWRARHQTVLAAERGRLKIEHEAALAHAVKEEADRLKLEHSEELAAVRRHVAQGKREALPFEKESWERERDRIIAAAITREKKKWQAEERMDTKEAGSDQILADAVNAERRRLEEEHESRLAEAEARWRQEQETAVAAAVARAASEAKRRQGKEEGRVDVATLLEKERKQWETEQAEALAAQKKSLKLRYATTLTEEMQKWEREKASLLASLSAASSGDLAGATTAAILTEREKLTKEHETALKAAMAAEKEKGRQEREAELFAQKNTLKQRYGQALMQEREKWRQEAQEAMEEKRAAWEKEHAQSLNVQRSILDPNHPAGIRAVIDVEREKWVAEHAASLAAALASEREVAKQEHSTALQASLAAQRKKLTEEHAKSLAQALSGAGVDSTSLVDARAQWETELDGERVRWQQEHEAAMLAQKNELKLRYATVLAQEKEKWMQGSSPPHAPSRPSR 1440
MVEAWLQRSREPRFFAVSFSWRFGFLIAIVIFIFLAEAGKAQGETLPLYATKIASSNNEEDTVQTLAIDADGNAIVAGSFRSESVTVADTATLANQGPPGTSDVFVAHFKADGSLNWAANWGGNHDDVVVDVAMDPSGASAYVVGVFKSPKISFSPVGSETNDDVLENIIYDADTLPTNVFIVKVSSAGKVLWRTQTGDKNIASVSVDSDSQRVYVTGTFPSYLATRNDDDTWKALESSLPLGVVDDDMTDDGGPEETGPVEQAGGSPSTSIWAENPFHKEGTATPAPDDGYSTDMYVDYYSSVTGELVDGTVFTGDLDEIPTDLVLEAGTTTPFVTGFSESGRVRLAPNLALTNTDSPLPGDHYGFVAKLDPTGKLVVWGKTLGLALGSNPLRLAVDSTRTTAPWTMLYVTGTFGSPEMMALMESTAGRIGSSLFPSLVRMNANTGEIVWVKGLPPPQQVGVDYTGAITVAGTFKASVSFSYDIPNLIARSANGDMYLARMDGHSQGEVVQVERFGGGSTGKYTVNDLAVDPAGNVYWAGNFTGGAIKFADTMLSTPGSGNIDGFFGRVAHPLPGRTAAPQKVPVPTMAPTRRPTTPSPTHSPTTVEWAKAQALLTKPPTKAPTRRPTRAPTSRPTPRPTMSPTAQSNTPAPSFPPTQRPTRMPTQEPVPVRNTLSPTKAPVTPLSIDSLSSGTLPTLLDTSGSSAAVAGTNVDMVLTYAGSQTTILEFQRSLYQLFRPYATSYATFIPSVAALNRRRMAGSSPITPASTLSLQELEYQASQTRDGRSYERSLRVNRCTDTKTAKFSLPFYIEAKNRAATAKILNLLEDMINGVSAMDSGRNIFDNTVLCSVSYSALSASPLIQADDSFAAPQMVPATSGVETMGADGAACQDKKGIQAFSLIMGIVLGLLGVMLSVGVFYVVQSRRLQRPARVTEPQSQPPRSFFTGFKGLTPKTRASLSATGSGAIASPEELTRQLEAEKERWRARHQTVLAAERGRLKIEHEAALAHAVKEEADRLKLEHSEELAAVRRHVAQGKREALPFEKESWERERDRIIAAAITREKKKWQAEERMDTKEAGSDQILADAVNAERRRLEEEHESRLAEAEARWRQEQETAVAAAVARAASEAKRRQGKEEGRVDVATLLEKERKQWETEQAEALAAQKKSLKLRYATTLTEEMQKWEREKASLLASLSAASSGDLAGATTAAILTEREKLTKEHETALKAAMAAEKEKGRQEREAELFAQKNTLKQRYGQALMQEREKWRQEAQEAMEEKRAAWEKEHAQSLNVQRSILDPNHPAGIRAVIDVEREKWVAEHAASLAAALASEREVAKQEHSTALQASLAAQRKKLTEEHAKSLAQALSGAGVDSTSLVDARAQWETELDGERVRWQQEHEAAMLAQKNELKLRYATVLAQEKEKWMQGSSPPHAPSRPSR
Sbjct: 1 MVEAWLQRSREPRFFAVSFSWRFGFLIAIVIFIFLAEAGKAQGETLPLYATKIASSNNEEDTVQTLAIDADGNAIVAGSFRSESVTVADTATLANQGPPGTSDVFVAHFKADGSLNWAANWGGNHDDVVVDVAMDPSGASAYVVGVFKSPKISFSPVGSETNDDVLENIIYDADTLPTNVFIVKVSSAGKVLWRTQTGDKNIASVSVDSDSQRVYVTGTFPSYLATRNDDDTWKALESSLPLGVVDDDMTDDGGPEETGPVEQAGGSPSTSIWAENPFHKEGTATPAPDDGYSTDMYVDYYSSVTGELVDGTVFTGDLDEIPTDLVLEAGTTTPFVTGFSESGRVRLAPNLALTNTDSPLPGDHYGFVAKLDPTGKLVVWGKTLGLALGSNPLRLAVDSTRTTAPWTMLYVTGTFGSPEMMALMESTAGRIGSSLFPSLVRMNANTGEIVWVKGLPPPQQVGVDYTGAITVAGTFKASVSFSYDIPNLIARSANGDMYLARMDGHSQGEVVQVERFGGGSTGKYTVNDLAVDPAGNVYWAGNFTGGAIKFADTMLSTPGSGNIDGFFGRVAHPLPGRTAAPQKVPVPTMAPTRRPTTPSPTHSPTTVEWAKAQALLTKPPTKAPTRRPTRAPTSRPTPRPTMSPTAQSNTPAPSFPPTQRPTRMPTQEPVPVRNTLSPTKAPVTPLSIDSLSSGTLPTLLDTSGSSAAVAGTNVDMVLTYAGSQTTILEFQRSLYQLFRPYATSYATFIPSVAALNRRRMAGSSPITPASTLSLQELEYQASQTRDGRSYERSLRVNRCTDTKTAKFSLPFYIEAKNRAATAKILNLLEDMINGVSAMDSGRNIFDNTVLCSVSYSALSASPLIQADDSFAAPQMVPATSGVETMGADGAACQDKKGIQAFSLIMGIVLGLLGVMLSVGVFYVVQSRRLQRPARVTEPQSQPPRSFFTGFKGLTPKTRASLSATGSGAIASPEELTRQLEAEKERWRARHQTVLAAERGRLKIEHEAALAHAVKEEADRLKLEHSEELAAVRRHVAQGKREALPFEKESWERERDRIIAAAITREKKKWQAEERMDTKEAGSDQILADAVNAERRRLEEEHESRLAEAEARWRQEQETAVAAAVARAASEAKRRQGKEEGRVDVATLLEKERKQWETEQAEALAAQKKSLKLRYATTLTEEMQKWEREKASLLASLSAASSGDLAGATTAAILTEREKLTKEHETALKAAMAAEKEKGRQEREAELFAQKNTLKQRYGQALMQEREKWRQEAQEAMEEKRAAWEKEHAQSLNVQRSILDPNHPAGIRAVIDVEREKWVAEHAASLAAALASEREVAKQEHSTALQASLAAQRKKLTEEHAKSLAQALSGAGVDSTSLVDARAQWETELDGERVRWQQEHEAAMLAQKNELKLRYATVLAQEKEKWMQGSSPPHAPSRPSR 1440
BLAST of EWM22181.1 vs. NCBI_GenBank
Match: gi|585102605|gb|EWM22178.1| (hypothetical protein Naga_100153g8 [Nannochloropsis gaditana]) HSP 1 Score: 236.113 bits (601), Expect = 6.947e-60 Identity = 181/581 (31.15%), Postives = 291/581 (50.09%), Query Frame = 0
Query: 26 LIAIVIFIFLAEAGKAQGETLPLYATKIASSNNEEDTVQTLAIDADGNAIVAGSFRSESVTVADTATLANQGPPGTS-----DVFVAHFKADGSLNWAANWGGNHDDVVVDVAMDPSGASAYVVGVFKSPKISFSPVGSETNDDVLENIIYD-ADTLPTNVFIVKVSSAGKVLWRTQTGDKNIASVSVDSDSQRVYVTGTFPSYLATRNDDDTWKALESSLPLGVVDDDMTDDGGPEETGPVEQAGGSPSTSIWAENPFHKEGTATPAPDDGYSTDMYVDYYSSVTGELVDGTVFTGDLDEIPTDLVLEAGTTTPFVTGFSESGRVRLAPNLALTNTDSPLP--GDHYGFVAKLDPTGKLVVWGKTLGLALGSNPLRLAVDSTRTTAPWTMLYVTGTFGSPEMMALMESTAGRIGSSLFPSLVRMNANTGEIVWVKGLPPPQQVGVDYTGAITVAGTFKASVSFSYDIPNLIARSANGDMYLARMDGHSQGEVVQVERFGG-GSTGKYTVNDLAVDPAGNVYWAGNFTGGAIKFADTMLSTPGSGNIDGFFGRVAHPLPGRTAAPQKVPVPTMAPTRRPTT 597
LIA V FI + G Q + + YA +I S +DT + +A+D GNA V G F +ES+ + + T NQG G S D F+A + G L WA +GG+ DDVV DV +DP G + ++ G F+S ++F G + N+IY AD N ++++V + G V+W TQTGD ++ S+ VD+ ++++G+FP ++++ S G+ DDD D G E ++ G + K+G S D+YVD+YS TG+L+ G FTGD D++ TD+ + ++ +TG+ S + L +++ +++P D GF+A+LD V+WG+ +G S PL++A D + L++TG F ++A + + L+ ++ TG I WVK +P P + VDY G + ++GT F + + S GD+Y+AR+ G ++ FGG G G Y+V + VD NVY AGN++ G++ L +PG+ ++DGF GR + PV T+A +P T
Sbjct: 52 LIASV-FILVLGLGATQAQAVAGYALRI-SGKKWDDTAKAMAVDKVGNAYVVGDFHAESIQIGNM-TFKNQGKTGQSADPSADSFLAKIDSSGDLEWAFVFGGDMDDVVQDVVVDPDGGNVFLTGTFQSEVLTFGDAGPP-----VYNLIYGLADEPEYNTYLMRVDAEGTVIWVTQTGDSDVGSIVVDAARDCLFLSGSFPGEPPVSEENES--NFGSKFSAGLEDDDTDDGRGSGELMGKKKGG----------DGLFKKG----------SLDIYVDHYSYRTGDLMSGVTFTGDRDDVNTDMAILPKSSALLITGYFYSDVLTLD-EMSVLRSENPNKRRADPTGFLARLDSIYGHVMWGQEVGEIASSPPLQVAADEASES-----LFITGNFLGRSILARSDGKSA--------GLISLSLKTGSIQWVKAVPAPASIVVDYLGFLYISGTTTKDTPFGANGGLISIGSDAGDIYVARLQAE-DGTILFDRSFGGEGKRGAYSVATVGVDAENNVYLAGNYSKGSLVLGGQALDSPGT-DVDGFVGRAVM--------GSEAPVSTLAGPNQPAT 578
BLAST of EWM22181.1 vs. NCBI_GenBank
Match: gi|553189603|ref|XP_005855036.1| (exported nucleotide-binding protein [Nannochloropsis gaditana CCMP526] >gi|422294021|gb|EKU21321.1| exported nucleotide-binding protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 203.371 bits (516), Expect = 1.067e-49 Identity = 157/515 (30.49%), Postives = 255/515 (49.51%), Query Frame = 0
Query: 92 TLANQGPPGTS-----DVFVAHFKADGSLNWAANWGGNHDDVVVDVAMDPSGASAYVVGVFKSPKISFSPVGSETNDDVLENIIYD-ADTLPTNVFIVKVSSAGKVLWRTQTGDKNIASVSVDSDSQRVYVTGTFPSYLATRNDDDTWKALESSLPLGVVDDDMTDDGGPEETGPVEQAGGSPSTSIWAENPFHKEGTATPAPDDGYSTDMYVDYYSSVTGELVDGTVFTGDLDEIPTDLVLEAGTTTPFVTGFSESGRVRLAPNLALTNTDSPLP--GDHYGFVAKLDPTGKLVVWGKTLGLALGSNPLRLAVDSTRTTAPWTMLYVTGTFGSPEMMALMESTAGRIGSSLFPSLVRMNANTGEIVWVKGLPPPQQVGVDYTGAITVAGTFKASVSFSYDIPNLIARSANGDMYLARMDGHSQGEVVQVERFGG-GSTGKYTVNDLAVDPAGNVYWAGNFTGGAIKFADTMLSTPGSGNIDGFFGRVAHPLPGRTAAPQKVPVPTMAPTRRPTT 597
T NQG G S D F+A + G L WA +GG+ DDVV DV +DP G + ++ G F+S ++F G + N+IY AD N ++++V + G V+W TQTGD ++ S+ VD+ ++++G+FP ++++ S G+ DDD D G E ++ G + K+G S D+YVD+YS TG+L+ G FTGD D++ TD+ + ++ +TG+ S + L +++ +++P D GF+A+LD V+WG+ +G S PL++A D + L++TG F ++A + + L+ ++ TG I WVK +P P + VDY G + ++GT F + + S GD+Y+AR+ G ++ FGG G G Y+V + VD NVY AGN++ G++ L +PG+ ++DGF GR + PV T+A +P T
Sbjct: 2 TFKNQGKTGQSADPSADSFLAKIDSSGDLEWAFVFGGDMDDVVQDVVVDPDGGNVFLTGTFQSEVLTFGDAGPP-----VYNLIYGLADEPEYNTYLMRVDAEGTVIWVTQTGDSDVGSIVVDAARDCLFLSGSFPGEPPVSEENES--NFGSKFSAGLEDDDTDDGRGSGELMGKKKGG----------DGLFKKG----------SLDIYVDHYSYRTGDLMSGVTFTGDRDDVNTDMAILPKSSALLITGYFYSDVLTLD-EMSVLRSENPNKRRADPTGFLARLDSIYGHVMWGQEVGEIASSPPLQVAADEASES-----LFITGNFLGRSILARSDGKSA--------GLISLSLKTGSIQWVKAVPAPASIVVDYLGFLYISGTTTKDTPFGANGGLISIGSDAGDIYVARLQAE-DGTILFDRSFGGEGKRGAYSVATVGVDAENNVYLAGNYSKGSLVLGGQALDSPGT-DVDGFVGRAVM--------GSEAPVSTLAGPNQPAT 465
BLAST of EWM22181.1 vs. NCBI_GenBank
Match: gi|1173294740|ref|WP_081153328.1| (hypothetical protein [Niastella vici] >gi|1172823914|gb|OQP60372.1| hypothetical protein A3860_33880 [Niastella vici]) HSP 1 Score: 75.485 bits (184), Expect = 7.942e-10 Identity = 137/523 (26.20%), Postives = 213/523 (40.73%), Query Frame = 0
Query: 61 DTVQTLAIDADGNAIVAGSFRSESVTVADTATLANQGPP------GTSDVFVAHFKADGSLNWAANWGGNHDDVVVDVAMDPSGASAYVVGVFKSPKISF-SPVGSETNDDVLENIIYDADTLPTNVFIVKVSSAGKV---LWRTQTGDKNIASVSVDSDSQRVYVTGTFPSYLATRNDDDTWKALESSLPLGVVDDDMT---DDGGPEETGPVEQAGGSPSTSIWA-ENPFHKEGTATPA-----------PDDGYSTDMYVDYYSSVTGELVDGTVFTGDLDEIPTDLVLEAGTTTPFVTGFSESGRVRL--APNLALTNTDSPLPGDHYGFVAKLDPTGKLVVWGKTLGLALGSNPLRLAVDSTRTTAPWTMLYVTGTFGSPEMMALMESTAGRIGSSLFPSLVRMNANTGEIVWVKGLPP-------PQQVGVDYTGAITVAGTFKASVSF--SYDIPNLIARSANG--DMYLARMDGHSQGEVVQVERFGGGSTGKYTVNDLAVDPAGNVYWAGNFTG 545
D+ +++DA GN + GSF TA L P G +D+F A + G+ WA GG DD+ + +D +G + ++ G F S + F + VG+ + T+ ++ K ++G + TGD S++ D+ +Y+ T+ S ND + K + P + +D+T DD G T V+ G S ST ++ F GT T A D Y + Y +V + G ++ D G+ +VTG+ +G V L P A + G + F+AK D G + WGK +G + + +AVD+T YVTGTF TA + S F + + G VW KG P P + +D +G + V G+ +V F S NL ++NG D++ R D + G R GG TG V+ + D +GNVY +G F G
Sbjct: 256 DSALAVSLDASGNIYITGSFSG-------TADLDGDAPAVSYTSVGNADIFWAKYDVSGTFAWAKTIGGTGDDIGRGINVDIAG-NVFLTGSF-SGTVDFDAGVGTANY----------SSYGGTDFYLAKYDASGNYAGAVTAGDTGDDFGRSITSDA-GGNIYMIVTYSS---NNNDIEIIKFDVTGNPEWI--NDITGAGDDNGNCIT--VDGNGNSYSTGYFSGTTSFFGGGTLTNATLTNAFVAKQKSDGSYGWASQLGRYETVVSSVATGK-------KVALD-----GSGNVYVTGY-FNGSVDLDAGPGTATFTS----AGSNDIFIAKYDGNGNYL-WGKQIGGSGADAGIAIAVDATGNA------YVTGTFNGIVDFDAGTGTANQGLSGWFSTFLTKYDAAGNFVWAKGFSPVTSGNSLPYGIAIDGSGNVFVTGSLSGTVDFDASAATANL---TSNGSFDVFFVRYD--AAGNFGWANRIGG--TGLENVSGITTDASGNVYISGAFNG 720
BLAST of EWM22181.1 vs. NCBI_GenBank
Match: gi|916677985|ref|WP_051285076.1| (hypothetical protein [Nisaea denitrificans]) HSP 1 Score: 75.0998 bits (183), Expect = 8.139e-10 Identity = 137/488 (28.07%), Postives = 201/488 (41.19%), Query Frame = 0
Query: 59 EEDTVQTLAIDADGNAIVAGSFRSESVTVADTATLANQGPPGTSDVFVAHFKADGSLNWAANWGGNHDDVVVDVAMDPSGASAYVVGVFKSPKISFSPVGSETNDDVLENIIYDADTLPTNVFIVKVSSAGKVLWRTQTGD---KNIASVSVDSDSQRVYVTGTF-------PSYL-----ATRNDD------DTWKALESSLPLGVVDDDMTDDGGPEETGPVEQAGGSPSTSIWAENPFHKEGTATPAPDDGYSTDMYVDYYSSVTGEL-----VDGTVFTGDLDEIPTDLVLEAGTTTPFVTGFSESGRVRLAPNLALTNTDSPLPGDHYGFVAKLDPTGKLVVWGKTLGLALGSNPLRLAVDSTRTTAPWTMLYVTGTFGSPEMMALMESTAGRIGSSLFPSLVRMNANTGEIVWVK---GLPPPQ--QVGVDYTGAITVAGTFKASVSF--SYDIPNLIARSANGDMYLARMDGHSQGEVVQV 513
+ D++Q +D+ GN+ V G F +V A N G D+F+A + + G L WA GG D + +D SG S YV G F+ F P G V +N+ +++FI K +G ++W G + S+ VDS S YVTG F PS + +T +D D+ L + LG D D + +G AG TS F G G S D ++ Y S +G L V GT D D + + V +G + +VTG + G P+ +TN S G + F+AK D +G L VW K +G L +AVDS+ + YVTG F T + + ++G +VWVK G Q V VD +G + V G F+ +V F NL + + D +L ++D S G +V V
Sbjct: 14 QGDSIQ---VDSSGNSYVTGYFGG-TVDFDPGAGTVNLTSAGNQDIFIAKYDSSGGLVWAKGVGGTSSDYGRSIEIDSSGNS-YVTGQFQGTA-DFDPSG------VTQNLTSAG---SSDIFIAKYDGSGDLVWAKSVGGTSADDSKSIQVDS-SGNSYVTGYFDGTVDFDPSGVTQNLTSTGGNDIFIAKYDSNGGLVWAKNLGGTGGDQGDSIQVDSSGNSYAAGNFQGTS-----DFDPSGVTQNLTSAG-SNDAFIAKYDS-SGALVWAKNVGGT----DYDAVNSIQVDSSGNS--YVTGIFQ-GTADFDPDAGVTNLTS--AGLYDTFIAKYDSSGGL-VWAKNIGGTENDIGLSVAVDSSGNS------YVTGDFKGTADFDPGAGTTNLTSAGARDIFIAQYDSSGALVWVKSFGGTSDDQGRSVQVDSSGNVHVTGVFQGTVDFDPGTGTENLTSAGSL-DAFLLKLD--SAGNLVSV 459 The following BLAST results are available for this feature:
BLAST of EWM22181.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 5
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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