EWM22174.1, cds8493 (CDS) Nannochloropsis gaditana

Overview
NameEWM22174.1
Unique Namecds8493
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:155517..155717 -
Alignment locationKK037249.1:155066..155223 -
Alignment locationKK037249.1:154419..154919 -
Alignment locationKK037249.1:154073..154223 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22174.1
Productcarbonate dehydratase
Orig transcript idgnl|cribi|Naga_100153g3.4148.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:155517..155717 -
KK037249.1supercontigKK037249.1:155066..155223 -
KK037249.1supercontigKK037249.1:154419..154919 -
KK037249.1supercontigKK037249.1:154073..154223 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005488binding
GO:0003824catalytic activity
Vocabulary: INTERPRO
TermDefinition
IPR023561Carbonic_anhydrase_a-class
IPR001148Carbonic_anhydrase_a
Homology
BLAST of EWM22174.1 vs. NCBI_GenBank
Match: gi|585102601|gb|EWM22174.1| (carbonate dehydratase [Nannochloropsis gaditana])

HSP 1 Score: 706.057 bits (1821), Expect = 0.000e+0
Identity = 336/336 (100.00%), Postives = 336/336 (100.00%), Query Frame = 0
Query:    1 MPSLSITPIDRKLSGHAPCIYLFPQNTMKIFTTSAACLALMMAPLSLIKAATSMEDLEKMESWSYIHNVNYAPCDDADAKSFGCCGKPEDGKERCGPDNWIHINETTTTTCANVKGNQQSPINIQTVGTTLTPMDKADGTMSFSGHTCEAFIEFKEGTWEVVIPDTCTFQAKIGGTDYKLLQFHFHNAEHSINFSYMPLEVHLVHAKVDSPKDIAVLSVFLAPGASSTFFETLQANEAQADPDHPDLATKNKINAYDILPEDHSFWHYVGSLTTPPCQTEKGQSVNWYLFKTPNTLSYSQLYYFTSYFRDLPLSDNGRISRDTQDLVEGTTLFTFP 336
            MPSLSITPIDRKLSGHAPCIYLFPQNTMKIFTTSAACLALMMAPLSLIKAATSMEDLEKMESWSYIHNVNYAPCDDADAKSFGCCGKPEDGKERCGPDNWIHINETTTTTCANVKGNQQSPINIQTVGTTLTPMDKADGTMSFSGHTCEAFIEFKEGTWEVVIPDTCTFQAKIGGTDYKLLQFHFHNAEHSINFSYMPLEVHLVHAKVDSPKDIAVLSVFLAPGASSTFFETLQANEAQADPDHPDLATKNKINAYDILPEDHSFWHYVGSLTTPPCQTEKGQSVNWYLFKTPNTLSYSQLYYFTSYFRDLPLSDNGRISRDTQDLVEGTTLFTFP
Sbjct:    1 MPSLSITPIDRKLSGHAPCIYLFPQNTMKIFTTSAACLALMMAPLSLIKAATSMEDLEKMESWSYIHNVNYAPCDDADAKSFGCCGKPEDGKERCGPDNWIHINETTTTTCANVKGNQQSPINIQTVGTTLTPMDKADGTMSFSGHTCEAFIEFKEGTWEVVIPDTCTFQAKIGGTDYKLLQFHFHNAEHSINFSYMPLEVHLVHAKVDSPKDIAVLSVFLAPGASSTFFETLQANEAQADPDHPDLATKNKINAYDILPEDHSFWHYVGSLTTPPCQTEKGQSVNWYLFKTPNTLSYSQLYYFTSYFRDLPLSDNGRISRDTQDLVEGTTLFTFP 336          
BLAST of EWM22174.1 vs. NCBI_GenBank
Match: gi|585100203|gb|EWM20524.1| (Alpha carbonic anhydrase [Nannochloropsis gaditana])

HSP 1 Score: 144.821 bits (364), Expect = 5.712e-37
Identity = 106/339 (31.27%), Postives = 148/339 (43.66%), Query Frame = 0
Query:   20 IYLFPQNTMKIFTTSAACLALMMAPLSLIKAATSMEDLEKMESWSYIHNVNYAPCDDADAKSFGCCGKPEDGKERCGPDNWIHINETTTTTC-ANVKGNQQSPINIQTVGTTLTPMDKADGTMSFSGHTCEAFIEFKEGTWEV-VIPDTCT--FQAKIGGTDYKLLQFHFHNAE-HSINFSYMPLEVHLVHAKVDSPKDIA-----VLSVFLAPGASSTFFETLQANEAQAD--PDHPDLATKNKINAYDILPEDHSFWHYVGSLTTP----PCQTEKGQSVN-------WYLFKTPNTLSYSQLYYFTSYFRDLPLSDNGRISRDTQDLVEGTTLFTF 335
            +++ P  T   FT       L   P    + + ++       +WSY  N  +  C+     +F  C       E CGP NW +I+     TC     G QQSPIN+         + KA G M FSG  C   +E    T+EV      C   F   + G  + L Q HFH    HS+N  Y P+EVH+ H  V      A     VL+VFL PG ++  F  L A  A     P   ++      N Y +LP+   +WHY GSL TP     CQ   G S N       WY+FK   T S SQ+ ++  Y  DLPL    R +R  Q+++  T ++++
Sbjct:    7 LFILPFATFAAFTKQKYTGGLFSDPTQKPQPSLAVN------AWSYYPNT-FGTCN---GTTFDSCPCGAGTAEPCGPLNWPYISAACFQTCLPGNGGGQQSPINLDAFEEGYEGLGKARGRMKFSGGRCAGLVEQNNLTYEVSFFGSACRKPFTLTVDGQVWVLWQIHFHGTSLHSVNGRYSPIEVHMAHLPVGKTPTTADTNALVLAVFLRPGKANRLFNILTARRADEGTVPGGEEVRMVKAGNPYWLLPKRKDYWHYQGSLGTPSFFGACQLNPGPSFNSTINNVQWYVFKHQQTASTSQIAWYADYACDLPLPYLCRNNRPLQEILPETQVYSY 335          
BLAST of EWM22174.1 vs. NCBI_GenBank
Match: gi|585100204|gb|EWM20525.1| (Carbonic anhydrase, alpha-class [Nannochloropsis gaditana])

HSP 1 Score: 144.05 bits (362), Expect = 1.379e-36
Identity = 107/338 (31.66%), Postives = 149/338 (44.08%), Query Frame = 0
Query:   20 IYLFPQNTMKIFTTSAACLALMMAPLSLIKAATSMEDLEKMESWSYIHNVNYAPCDDADAKSFGCCGKPEDGKERCGPDNWIHINETTTTTCA-NVKGNQQSPINIQTVGTTLTPMDKADGTMSFSGHTCEAFIEFKEGTWEVV-IPDTCT--FQAKIGGTDYKLLQFHFHN-AEHSINFSYMPLEVHLVHAKVDSPKDIA-----VLSVFLAPGASSTFFETLQANEAQAD--PDHPDLATKNKINAYDILPEDHSFWHYVGSLTT---PPCQTEKGQSVN-------WYLFKTPNTLSYSQLYYFTSYFRDLPLSDNGRISRDTQDLVEGTTLFTF 335
            +++ P  T   FT       L   P    + + ++       +WSY  N  +  C+     +F  C       E CGP NW +I+     TC     G QQSPIN+         + KA G M FSG  C   I+    T+EVV   D C   F   + G  + L Q H H  +EHS+N  Y P+E H+VH  V      A     VL+VFL PG ++  F  L A  A     P    +      N Y +LP+   +WHY GSLTT     CQ   G S N       WY+FK   T+S SQ+ + T Y   LPL      +R  Q+++  T ++++
Sbjct:    9 LFILPFATFAAFTKQKYTGGLFSDPTQKPQPSVAVN------AWSYYPNT-FGTCN---GTTFDSCPCGAGTAEPCGPLNWPYISAACFQTCLPGNGGGQQSPINLDAFEEGYEGLGKARGRMKFSGGRCAGLIKKGLSTYEVVFFGDACRKPFTLTVDGQVWVLWQIHLHGPSEHSVNGIYSPVEAHMVHLPVGKTPTTADTNALVLAVFLRPGKANRLFNILTARHADEGTVPGGKQVRMVKAGNPYWLLPKRKDYWHYQGSLTTVSYGGCQLNPGLSFNSTINNVQWYVFKHQQTVSASQIAWLTDYLCGLPLPYLCTSNRPLQEILPETQVYSY 336          
BLAST of EWM22174.1 vs. NCBI_GenBank
Match: gi|515885124|ref|WP_017315707.1| (hypothetical protein [Mastigocladopsis repens])

HSP 1 Score: 115.931 bits (289), Expect = 8.128e-27
Identity = 79/236 (33.47%), Postives = 126/236 (53.39%), Query Frame = 0
Query:   96 GPDNWIHINETTTTTCANVKGNQQSPINIQTVGTTLTPMDKADGTMSFSGHTCEAFIEFKEGTWEVVIPDTCTFQAK--IGGTDYKLLQFHFHN-AEHSINFSYMPLEVHLVHAKVDSPKDIAVLSVFLAPGASSTFFETLQANEAQADPDHPDLATK---NKINAYDILPEDHSFWHYVGSLTTPPCQTEKGQSVNWYLFKTPNTLSYSQLYYFTS---YFRDLPLS-DNGRISR 321
            GPDNW  +N      C   +G +QSPINI T     TP +   GT+ F  ++C   ++ K    E+ I + C    K  I   +Y+L +FHFH  +EH+++    P+E+HLVH KV +P  + V++VF+  G  ++F E + +N     P+ P    K   + ++  ++LP+ H  ++Y GSLTTPPC     ++V+W +FK     S SQ+   +S   +F   P+   N R+ R
Sbjct:   28 GPDNWAELN-PDYQKCD--QGQKQSPININTKEIVRTPWN---GTLQFQ-YSCPD-LKLKNTGREIEI-ECCDRSNKLVIAQQEYELKEFHFHTPSEHAVDLHAYPVEIHLVHEKVGNPSKLVVVAVFINQGEENSFLELIASNL----PEQPGCEIKVSNSDVSVLNLLPKTHGLYYYSGSLTTPPC----SENVHWIVFKETVFASVSQISRLSSVFPFFNTRPVQPTNSRLVR 246          
BLAST of EWM22174.1 vs. NCBI_GenBank
Match: gi|1214452606|ref|WP_088838987.1| (carbonic anhydrase [Listeria sp. ILCC801])

HSP 1 Score: 111.309 bits (277), Expect = 3.207e-25
Identity = 68/196 (34.69%), Postives = 106/196 (54.08%), Query Frame = 0
Query:  116 GNQQSPINIQTVGTTLTPM-DKADGTMSFSGHTCEAFIEFKEGTWEVVIPDTCTFQAKIGGTDYKLLQFHFH-NAEHSINFSYMPLEVHLVHAKVDSPKDIAVLSVFLAPGASSTFFETLQANEAQADPDHPDLATKNKINAYDILPEDHSFWHYVGSLTTPPCQTEKGQSVNWYLFKTPNTLSYSQLYYFTSYFR 309
            G+ QSPINI+T  T   PM D  +  + +S    +A ++  +    + + DT T  AKI G +++L QFHFH  +EH++N  + P+E H V+   D    IAV+ VF   G  +  F T+ AN  + +     +   + IN   +LPE+ S++HY+GSLTTPP      ++V WY+   P  +S  Q+  F  Y+ 
Sbjct:   55 GDSQSPINIETAKTE--PMKDSGEIELDYS----DAVVDEVDNGHSIQVDDTGT--AKINGRNFELSQFHFHAKSEHTLNGEHYPIEAHFVNQSQDGR--IAVIGVFFKEGKENAGFNTVLANIKKGEK----VKVGDTINVASMLPENKSYYHYLGSLTTPPL----SENVEWYVMANPVEVSSEQIKEFDRYYE 232          
BLAST of EWM22174.1 vs. NCBI_GenBank
Match: gi|1214456569|ref|WP_088840719.1| (carbonic anhydrase [Listeria sp. ILCC801])

HSP 1 Score: 110.923 bits (276), Expect = 5.056e-25
Identity = 68/196 (34.69%), Postives = 106/196 (54.08%), Query Frame = 0
Query:  116 GNQQSPINIQTVGTTLTPM-DKADGTMSFSGHTCEAFIEFKEGTWEVVIPDTCTFQAKIGGTDYKLLQFHFH-NAEHSINFSYMPLEVHLVHAKVDSPKDIAVLSVFLAPGASSTFFETLQANEAQADPDHPDLATKNKINAYDILPEDHSFWHYVGSLTTPPCQTEKGQSVNWYLFKTPNTLSYSQLYYFTSYFR 309
            G+ QSPINI+T  T   PM D  +  + +S    +A ++  +    + + DT T  AKI G +++L QFHFH  +EH++N  + P+E H V+   D    IAV+ VF   G  +  F T+ AN  + +     +   + IN   +LPE+ S++HY+GSLTTPP      ++V WY+   P  +S  Q+  F  Y+ 
Sbjct:   55 GDSQSPINIETAKTE--PMKDSGEIELDYS----DAVVDEVDNGHSIQVDDTGT--AKINGRNFELSQFHFHAKSEHTLNGEHYPIEAHFVNQSQDGR--IAVIGVFFKEGKENAGFNTVLANIKKGEK----VKVGDTINVASMLPENKSYYHYLGSLTTPPL----SENVEWYVMANPVEVSSEQIKEFDRYYE 232          
BLAST of EWM22174.1 vs. NCBI_GenBank
Match: gi|1214425215|ref|WP_088815751.1| (carbonic anhydrase [Listeria sp. ILCC801])

HSP 1 Score: 110.923 bits (276), Expect = 5.056e-25
Identity = 68/195 (34.87%), Postives = 106/195 (54.36%), Query Frame = 0
Query:  116 GNQQSPINIQTVGTTLTPM-DKADGTMSFSGHTCEAFIEFKEGTWEVVIPDTCTFQAKIGGTDYKLLQFHFH-NAEHSINFSYMPLEVHLVHAKVDSPKDIAVLSVFLAPGASSTFFETLQANEAQADPDHPDLATKNKINAYDILPEDHSFWHYVGSLTTPPCQTEKGQSVNWYLFKTPNTLSYSQLYYFTSYF 308
            G+ QSPINI+T  T   PM D  +  + +S    +A ++  +    + + DT T  AKI G +++L QFHFH  +EH++N  + P+E H V+   D    IAV+ VF   G  +  F T+ AN  + +     +   + IN   +LPE+ S++HY+GSLTTPP      ++V WY+   P  +S  Q+  F  Y+
Sbjct:   55 GDSQSPINIETAKTE--PMKDSGEIELDYS----DAVVDEVDNGHSIQVDDTGT--AKINGRNFELSQFHFHAKSEHTLNGEHYPIEAHFVNQSQDGR--IAVIGVFFKEGKENAGFNTVLANIKKGEK----VKVGDTINVASMLPENKSYYHYLGSLTTPPL----SENVEWYVMANPVEVSSEQIKEFDRYY 231          
BLAST of EWM22174.1 vs. NCBI_GenBank
Match: gi|1214437729|ref|WP_088825716.1| (carbonic anhydrase [Listeria sp. ILCC801])

HSP 1 Score: 110.923 bits (276), Expect = 5.436e-25
Identity = 68/195 (34.87%), Postives = 106/195 (54.36%), Query Frame = 0
Query:  116 GNQQSPINIQTVGTTLTPM-DKADGTMSFSGHTCEAFIEFKEGTWEVVIPDTCTFQAKIGGTDYKLLQFHFH-NAEHSINFSYMPLEVHLVHAKVDSPKDIAVLSVFLAPGASSTFFETLQANEAQADPDHPDLATKNKINAYDILPEDHSFWHYVGSLTTPPCQTEKGQSVNWYLFKTPNTLSYSQLYYFTSYF 308
            G+ QSPINI+T  T   PM D  +  + +S    +A ++  +    + + DT T  AKI G +++L QFHFH  +EH++N  + P+E H V+   D    IAV+ VF   G  +  F T+ AN  + +     +   + IN   +LPE+ S++HY+GSLTTPP      ++V WY+   P  +S  Q+  F  Y+
Sbjct:   55 GDSQSPINIETAKTE--PMKDSGEIELDYS----DAVVDEVDNGHSIQVDDTGT--AKINGRNFELSQFHFHAKSEHTLNGEHYPIEAHFVNQSQDGR--IAVIGVFFKEGKENAGFNTVLANIKKGEK----VKVGDTINVASMLPENKSYYHYLGSLTTPPL----SENVEWYVMANPVEVSSEQIKEFDRYY 231          
BLAST of EWM22174.1 vs. NCBI_GenBank
Match: gi|1214417182|ref|WP_088809787.1| (carbonic anhydrase [Listeria sp. ILCC801])

HSP 1 Score: 110.923 bits (276), Expect = 5.665e-25
Identity = 68/195 (34.87%), Postives = 106/195 (54.36%), Query Frame = 0
Query:  116 GNQQSPINIQTVGTTLTPM-DKADGTMSFSGHTCEAFIEFKEGTWEVVIPDTCTFQAKIGGTDYKLLQFHFH-NAEHSINFSYMPLEVHLVHAKVDSPKDIAVLSVFLAPGASSTFFETLQANEAQADPDHPDLATKNKINAYDILPEDHSFWHYVGSLTTPPCQTEKGQSVNWYLFKTPNTLSYSQLYYFTSYF 308
            G+ QSPINI+T  T   PM D  +  + +S    +A ++  +    + + DT T  AKI G +++L QFHFH  +EH++N  + P+E H V+   D    IAV+ VF   G  +  F T+ AN  + +     +   + IN   +LPE+ S++HY+GSLTTPP      ++V WY+   P  +S  Q+  F  Y+
Sbjct:   55 GDSQSPINIETAKTE--PMKDSGEIELDYS----DAVVDEVDNGHSIQVDDTGT--AKINGRNFELSQFHFHAKSEHTLNGEHYPIEAHFVNQSQDGR--IAVIGVFFKEGKENAGFNTVLANIKKGEK----VKVGDTINVASMLPENKSYYHYLGSLTTPPL----SENVEWYVMANPVEVSSEQIKEFDRYY 231          
BLAST of EWM22174.1 vs. NCBI_GenBank
Match: gi|502899196|ref|WP_013134172.1| (carbonate dehydratase [Arcobacter nitrofigilis] >gi|296096077|gb|ADG92027.1| Carbonate dehydratase [Arcobacter nitrofigilis DSM 7299])

HSP 1 Score: 108.612 bits (270), Expect = 5.326e-24
Identity = 80/222 (36.04%), Postives = 110/222 (49.55%), Query Frame = 0
Query:   96 GPDNWIHINETTTTTCANVKGNQQSPINIQTVGTTLTP------MDKADGTMSF--SGHTCEAFIEFKEGTWEVVIPDTCTFQAKIGGTDYKLLQFHFHN-AEHSINFSYMPLEVHLVHAKVDSPKDIAVLSVFLAPGASSTFFETLQANEAQADPDHPDLATKNKINAYDILPEDHSFWHYVGSLTTPPCQTEKGQSVNWYLFKTPNTLSYSQLYYFTSYF 308
            GP  W  IN  +  TC N  G +QSPINI    T  T        D  D ++S   +GHT +   + +          +  FQ    G  +KLLQFHFH+ +EH++N  Y PLE+HLVH   D   ++ V+ VF   G  ++  + +       D    +   K  IN  D LP+D  ++HY+GSLTTPPC     Q V WY+ K P TLS  QL  F + +
Sbjct:   46 GPKFWGTIN-PSFQTCEN--GERQSPINITKEATVATNSLGNLFFDYKDTSISIINNGHTIQVNSDNQ---------SSALFQ----GKKFKLLQFHFHSKSEHTVNGEYYPLELHLVHQAEDG--ELGVVGVFFKLGDYNSSLQKV-LKFMPKDAGGKNEIDKFSINPNDFLPKDRGYYHYLGSLTTPPCT----QIVEWYVMKNPITLSQKQLEQFQNLY 244          
The following BLAST results are available for this feature:
BLAST of EWM22174.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102601|gb|EWM22174.1|0.000e+0100.00carbonate dehydratase [Nannochloropsis gaditana][more]
gi|585100203|gb|EWM20524.1|5.712e-3731.27Alpha carbonic anhydrase [Nannochloropsis gaditana... [more]
gi|585100204|gb|EWM20525.1|1.379e-3631.66Carbonic anhydrase, alpha-class [Nannochloropsis g... [more]
gi|515885124|ref|WP_017315707.1|8.128e-2733.47hypothetical protein [Mastigocladopsis repens][more]
gi|1214452606|ref|WP_088838987.1|3.207e-2534.69carbonic anhydrase [Listeria sp. ILCC801][more]
gi|1214456569|ref|WP_088840719.1|5.056e-2534.69carbonic anhydrase [Listeria sp. ILCC801][more]
gi|1214425215|ref|WP_088815751.1|5.056e-2534.87carbonic anhydrase [Listeria sp. ILCC801][more]
gi|1214437729|ref|WP_088825716.1|5.436e-2534.87carbonic anhydrase [Listeria sp. ILCC801][more]
gi|1214417182|ref|WP_088809787.1|5.665e-2534.87carbonic anhydrase [Listeria sp. ILCC801][more]
gi|502899196|ref|WP_013134172.1|5.326e-2436.04carbonate dehydratase [Arcobacter nitrofigilis] >g... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8520rna8520Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications