EWM29801.1, cds849 (CDS) Nannochloropsis gaditana

Overview
NameEWM29801.1
Unique Namecds849
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:565898..566125 +
Alignment locationCM002456.1:566483..566860 +
Alignment locationCM002456.1:567101..567937 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM29801.1
Producthistone deacetylase 1
Orig transcript idgnl|cribi|Naga_100017g40.299.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:565898..566125 +
CM002456.1supercontigCM002456.1:566483..566860 +
CM002456.1supercontigCM002456.1:567101..567937 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0005654nucleoplasm
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0005488binding
GO:0004407histone deacetylase activity
Vocabulary: Biological Process
TermDefinition
GO:0006139nucleobase-containing compound metabolic process
GO:0009058biosynthetic process
GO:0006464cellular protein modification process
GO:0016043cellular component organization
GO:0016575histone deacetylation
Vocabulary: INTERPRO
TermDefinition
IPR023801His_deacetylse_dom
IPR000286His_deacetylse
IPR003084His_deacetylse_1
Homology
BLAST of EWM29801.1 vs. NCBI_GenBank
Match: gi|585112382|gb|EWM29801.1| (histone deacetylase 1 [Nannochloropsis gaditana])

HSP 1 Score: 1005.74 bits (2599), Expect = 0.000e+0
Identity = 480/480 (100.00%), Postives = 480/480 (100.00%), Query Frame = 0
Query:    1 MKKRRTTYFGERSTTWMAKDGNVPCSPSSVPHDPPHVRVPTTPGHKSQDMSSKKRVSYFYHGDVGHYYYGPGHPMKPHRLKLTHHLVLGYGLYRKMEVYRPHIATTQELQKFHSQEYVNFLSRVNPDMGRTLSSSVHSKFNVGEYTDCPIFDGMMEFCKIYTGCSIDGAQKLNHKITDVAVNWSGGLHHAKKGEASGFCYINDIVLAILELLKYHPRVLYIDIDIHHGDGVEEAFYCTDRVMTVSFHRYGDFFPGTGNIKDVGAKNGKYYSVNVPLEEGIDDASYERVFRPVMAKVMEVYQPSAVVLQCGADSLSGDRLGCFNLTLRGHAKCVEMMKGYNVPLLILGGGGYAIRNVARCWAFETSVLLEEEVSDEIPRNDYYDYYAPDYKLHLPPGTTENQNSTEGLEAIKVQILQQLSQIPGAPSVQMQEVPPDWATNERGGGEDEEDPDVRSSNRNRFGGERREHEAEFYDGGKDQDR 480
            MKKRRTTYFGERSTTWMAKDGNVPCSPSSVPHDPPHVRVPTTPGHKSQDMSSKKRVSYFYHGDVGHYYYGPGHPMKPHRLKLTHHLVLGYGLYRKMEVYRPHIATTQELQKFHSQEYVNFLSRVNPDMGRTLSSSVHSKFNVGEYTDCPIFDGMMEFCKIYTGCSIDGAQKLNHKITDVAVNWSGGLHHAKKGEASGFCYINDIVLAILELLKYHPRVLYIDIDIHHGDGVEEAFYCTDRVMTVSFHRYGDFFPGTGNIKDVGAKNGKYYSVNVPLEEGIDDASYERVFRPVMAKVMEVYQPSAVVLQCGADSLSGDRLGCFNLTLRGHAKCVEMMKGYNVPLLILGGGGYAIRNVARCWAFETSVLLEEEVSDEIPRNDYYDYYAPDYKLHLPPGTTENQNSTEGLEAIKVQILQQLSQIPGAPSVQMQEVPPDWATNERGGGEDEEDPDVRSSNRNRFGGERREHEAEFYDGGKDQDR
Sbjct:    1 MKKRRTTYFGERSTTWMAKDGNVPCSPSSVPHDPPHVRVPTTPGHKSQDMSSKKRVSYFYHGDVGHYYYGPGHPMKPHRLKLTHHLVLGYGLYRKMEVYRPHIATTQELQKFHSQEYVNFLSRVNPDMGRTLSSSVHSKFNVGEYTDCPIFDGMMEFCKIYTGCSIDGAQKLNHKITDVAVNWSGGLHHAKKGEASGFCYINDIVLAILELLKYHPRVLYIDIDIHHGDGVEEAFYCTDRVMTVSFHRYGDFFPGTGNIKDVGAKNGKYYSVNVPLEEGIDDASYERVFRPVMAKVMEVYQPSAVVLQCGADSLSGDRLGCFNLTLRGHAKCVEMMKGYNVPLLILGGGGYAIRNVARCWAFETSVLLEEEVSDEIPRNDYYDYYAPDYKLHLPPGTTENQNSTEGLEAIKVQILQQLSQIPGAPSVQMQEVPPDWATNERGGGEDEEDPDVRSSNRNRFGGERREHEAEFYDGGKDQDR 480          
BLAST of EWM29801.1 vs. NCBI_GenBank
Match: gi|325179608|emb|CCA14006.1| (histone deacetylase putative [Albugo laibachii Nc14])

HSP 1 Score: 598.201 bits (1541), Expect = 0.000e+0
Identity = 280/448 (62.50%), Postives = 345/448 (77.01%), Query Frame = 0
Query:   35 PHVRVPTTP-GHKSQDMSSKKRVSYFYHGDVGHYYYGPGHPMKPHRLKLTHHLVLGYGLYRKMEVYRPHIATTQELQKFHSQEYVNFLSRVNPDMGRTLSSSVHSKFNVGEYTDCPIFDGMMEFCKIYTGCSIDGAQKLNHKITDVAVNWSGGLHHAKKGEASGFCYINDIVLAILELLKYHPRVLYIDIDIHHGDGVEEAFYCTDRVMTVSFHRYGDFFPGTGNIKDVGAKNGKYYSVNVPLEEGIDDASYERVFRPVMAKVMEVYQPSAVVLQCGADSLSGDRLGCFNLTLRGHAKCVEMMKGYNVPLLILGGGGYAIRNVARCWAFETSVLLEEEVSDEIPRNDYYDYYAPDYKLHLPPG-TTENQNSTEGLEAIKVQILQQLSQIPGAPSVQMQEVPPDWATNERGGGEDEEDPDVRSSNRNRFGGERREHEAEFYDGGKDQDR 480
            PH+R+       +   M  K RV+YFYH D GH+YYGPGHPMKPHR+KLTHHLV+ Y LYRKM+V+ PH A+ +E++ FHS EY++FL RV P   +  S  +  KFN G++TDCP+FDG+ +FC+IY+G ++D A +LNH + D+A+NW+GGLHHAKK E SGFCY+NDIVL ILELL+YHPRVLYIDID+HHGDGVEEAFY TDRVMTVSFH+YGDFFPGTG+IKD+GAKNGKYY+VN PL  G+ D SY  +F+PV+AKVME +QPSAVVLQCGADSL+GDRLGCFN+T +GH +CVE +K Y  PLL+LGGGGY IRNVAR WA+ET+VLL EEVS+ IP NDY++YYAP +KLHL P    EN NS E +E IK++I + L  + GAPSVQM + PP   T E    ED  DPD R S  +     RR+ EAEFY+   DQD+
Sbjct:   36 PHIRILIVRFAWQYWVMGGKTRVAYFYHPDEGHFYYGPGHPMKPHRMKLTHHLVVNYDLYRKMDVFEPHWASPEEIKAFHSPEYIDFLQRVTPTNQKEFSQELQ-KFNCGDFTDCPVFDGVFDFCRIYSGGTLDAAHRLNHGLCDIAINWAGGLHHAKKSEGSGFCYVNDIVLGILELLRYHPRVLYIDIDVHHGDGVEEAFYVTDRVMTVSFHKYGDFFPGTGDIKDLGAKNGKYYAVNFPLLSGMTDESYTNIFKPVIAKVMETFQPSAVVLQCGADSLTGDRLGCFNVTTKGHGECVEFVKSYGFPLLVLGGGGYTIRNVARAWAYETAVLLGEEVSNNIPYNDYFEYYAPSFKLHLDPDPELENANSKEYMEDIKIKIFENLRALDGAPSVQMAQAPPSILTREE--DEDAVDPDTRPSEHDN----RRQPEAEFYNNENDQDQ 476          
BLAST of EWM29801.1 vs. NCBI_GenBank
Match: gi|397599110|gb|EJK57351.1| (hypothetical protein THAOC_22614 [Thalassiosira oceanica])

HSP 1 Score: 595.119 bits (1533), Expect = 0.000e+0
Identity = 285/439 (64.92%), Postives = 343/439 (78.13%), Query Frame = 0
Query:   52 SKKRVSYFYHGDVGHYYYGPGHPMKPHRLKLTHHLVLGYGLYRKMEVYRPHIATTQELQKFHSQEYVNFLSRVNPDMGRTLSSSVHSKFNVGEYTDCPIFDGMMEFCKIYTGCSIDGAQKLNHKITDVAVNWSGGLHHAKKGEASGFCYINDIVLAILELLKYHPRVLYIDIDIHHGDGVEEAFYCTDRVMTVSFHRYGDFFPGTGNIKDVGAKNGKYYSVNVPLEEGIDDASYERVFRPVMAKVMEVYQPSAVVLQCGADSLSGDRLGCFNLTLRGHAKCVEMMKGYNVPLLILGGGGYAIRNVARCWAFETSVLLEEEVSDEIPRNDYYDYYAPDYKLHLPPGTTENQNSTEGLEAIKVQILQQLSQIPGAPSVQMQEVPPDWAT--------NER--------GGGEDE--EDPDVRSSNRNRFG-GERREHEAEF 471
            SK+RVSYFY  DVGH+YYGP HPMKPHR+K+ HHL+L YGLYRKMEVYR H A+  E+  FHS++Y+NFL++V PD  R  S+ +  KFNVGEYTDCP+FDG+ EF ++YTG S+DGA KLN    DVAVNWSGGLHHAKK EASGFCYINDIVLAILELLK H RVLYIDID+HHGDGVEEAFYCTDRVMT S H+YGDFFPGTG+IKD GAK G  YSVNVPL  G+ D +YE++F+PVM K+MEV++P A+VLQCGADSL+GDRLGCFNL+L+GHA+CV   K + VP L+LGGGGY IRNVARCWA+ETSVLL+ ++ DEIP NDYY+YYAPD+KLHL P   EN N+   +E++++ +L QLS + GAPSV M EVPPD+ T        +ER        G GE++     DVR   R + G GER++HEAE 
Sbjct:    4 SKQRVSYFYQPDVGHFYYGPSHPMKPHRIKMAHHLILSYGLYRKMEVYRSHPASPAEMSAFHSEDYINFLAKVTPDNLRGYSNQMQ-KFNVGEYTDCPVFDGLYEFTQLYTGASLDGAVKLNRGDCDVAVNWSGGLHHAKKSEASGFCYINDIVLAILELLKVHARVLYIDIDVHHGDGVEEAFYCTDRVMTFSLHKYGDFFPGTGHIKDTGAKEGTGYSVNVPLTSGMTDDAYEKIFKPVMDKIMEVFRPGAIVLQCGADSLTGDRLGCFNLSLKGHAECVRYTKSFGVPTLVLGGGGYTIRNVARCWAYETSVLLDTKLPDEIPYNDYYEYYAPDFKLHLTPEQRENLNTEASMESVRIDLLTQLSGLRGAPSVGMGEVPPDFETIRESTRENDERTEAREVRDGDGENDGGSGDDVRGRGRTKDGKGERKDHEAEL 441          
BLAST of EWM29801.1 vs. NCBI_GenBank
Match: gi|953501137|emb|CEG37507.1| (histone deacetylase [Plasmopara halstedii])

HSP 1 Score: 590.112 bits (1520), Expect = 0.000e+0
Identity = 266/429 (62.00%), Postives = 342/429 (79.72%), Query Frame = 0
Query:   51 SSKKRVSYFYHGDVGHYYYGPGHPMKPHRLKLTHHLVLGYGLYRKMEVYRPHIATTQELQKFHSQEYVNFLSRVNPDMGRTLSSSVHSKFNVGEYTDCPIFDGMMEFCKIYTGCSIDGAQKLNHKITDVAVNWSGGLHHAKKGEASGFCYINDIVLAILELLKYHPRVLYIDIDIHHGDGVEEAFYCTDRVMTVSFHRYGDFFPGTGNIKDVGAKNGKYYSVNVPLEEGIDDASYERVFRPVMAKVMEVYQPSAVVLQCGADSLSGDRLGCFNLTLRGHAKCVEMMKGYNVPLLILGGGGYAIRNVARCWAFETSVLLEEEVSDEIPRNDYYDYYAPDYKLHLPPG-TTENQNSTEGLEAIKVQILQQLSQIPGAPSVQMQEVPPDWATNERGGGEDEEDPDVRSSNRNRFGGERREHEAEFYDGGKDQ 478
            ++KKRVSYFYH + GH+YYGPGHPMKPHR+KL HHLV+ Y LYRKM+++ PHIA+ +E++ FH+ +Y++FL +++P   + L+S +  K+N+GE TDCP+FDG+ +FC+IY+G ++D   +LNH   D+A+NW+GGLHHAKK E SGFCY+NDIVL ILELLKYHPRVLYIDID+HHGDGVEEAFY TDRVMTVSFH+YGDFFPGTG+IKD+GAKNGKYY+VN PL  G++D SYE VF+PV+ KVME + PSAVVLQCGADSL+GDRLGCFN+T +GH +CV  +K + +P+L+LGGGGY IRNV+R WA+ETS+LL+EEVS+ IP NDY+++YAP++KLHL P    EN NS E L+  K +I + LS + GAPS+QM + PP +   E    ED  DPD R+ N       +R+HEAEFY   KDQ
Sbjct:    4 ATKKRVSYFYHPEEGHFYYGPGHPMKPHRMKLAHHLVVNYDLYRKMDIFEPHIASAEEIKTFHAPDYIDFLQKISPSNQKELASELQ-KYNLGELTDCPVFDGIFDFCQIYSGGTLDAVSRLNHGQCDIAINWAGGLHHAKKSEGSGFCYVNDIVLGILELLKYHPRVLYIDIDVHHGDGVEEAFYVTDRVMTVSFHKYGDFFPGTGDIKDIGAKNGKYYAVNFPLLSGMNDESYESVFKPVIQKVMETFCPSAVVLQCGADSLTGDRLGCFNVTTKGHGECVRFVKSFGLPMLVLGGGGYTIRNVSRAWAYETSILLDEEVSNNIPYNDYFEFYAPNFKLHLEPDPDLENANSREYLDECKQKIFENLSALTGAPSIQMNQAPPVYMLREE--DEDAADPDSRAENDG-----KRQHEAEFYKDDKDQ 424          
BLAST of EWM29801.1 vs. NCBI_GenBank
Match: gi|223995841|ref|XP_002287594.1| (histone deactylase 1 HDAC Hda1p HDA1, partial [Thalassiosira pseudonana CCMP1335] >gi|220976710|gb|EED95037.1| histone deactylase 1 HDAC Hda1p HDA1, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 589.726 bits (1519), Expect = 0.000e+0
Identity = 267/417 (64.03%), Postives = 333/417 (79.86%), Query Frame = 0
Query:   41 TTPGHKSQDMSSKKRVSYFYHGDVGHYYYGPGHPMKPHRLKLTHHLVLGYGLYRKMEVYRPHIATTQELQKFHSQEYVNFLSRVNPDMGRTLSSSVHSKFNVGEYTDCPIFDGMMEFCKIYTGCSIDGAQKLNHKITDVAVNWSGGLHHAKKGEASGFCYINDIVLAILELLKYHPRVLYIDIDIHHGDGVEEAFYCTDRVMTVSFHRYGDFFPGTGNIKDVGAKNGKYYSVNVPLEEGIDDASYERVFRPVMAKVMEVYQPSAVVLQCGADSLSGDRLGCFNLTLRGHAKCVEMMKGYNVPLLILGGGGYAIRNVARCWAFETSVLLEEEVSDEIPRNDYYDYYAPDYKLHLPPGTTENQNSTEGLEAIKVQILQQLSQIPGAPSVQMQEVPPDW--------ATNERGGGEDEED 449
            TT    S   ++K+RVSYFY  DVGH+YYGP HPMKPHR+K+ HHL+L YG+YR+ME Y+ H A+  E+  FHS++Y+NF+++V PD  R  S+++ ++FNVGEYTDCP+FDG+ EF ++YTG S+DGA KLN    D+AVNWSGGLHHAKK EASGFCYINDIVLAILE+LK H RVLYIDID+HHGDGVEEAFYCTDRVMT S H+YGDFFPGTG+IKD GAK G  +SVN PL  G+ D +YE++F+PV++K+MEV+QP A+VLQCGADSL+GDRLGCFNL+L+GHA+CV+  K +NVP L+LGGGGY IRNVARCWA+ETSVLL+ E+ DEIP NDYY+YYAPD+KLHL P   EN N+   LE+++V +L QL  + GAPSVQM EVPPD+        A  ER   +++ D
Sbjct:    4 TTAITTSGSTANKQRVSYFYQPDVGHFYYGPSHPMKPHRIKMAHHLILSYGMYRQMECYKSHPASPSEMAAFHSEDYINFMAKVTPDNLRGFSNAM-NRFNVGEYTDCPVFDGLFEFTQLYTGASLDGAVKLNRGDCDIAVNWSGGLHHAKKSEASGFCYINDIVLAILEMLKVHARVLYIDIDVHHGDGVEEAFYCTDRVMTFSLHKYGDFFPGTGHIKDTGAKEGTGFSVNAPLTSGMTDGTYEKLFKPVLSKIMEVFQPGAIVLQCGADSLTGDRLGCFNLSLKGHAECVKFTKSFNVPTLVLGGGGYTIRNVARCWAYETSVLLDMELPDEIPYNDYYEYYAPDFKLHLTPEQRENMNTEASLESVRVDLLTQLISLKGAPSVQMMEVPPDFEVIKEDLNAEKERKSTKEDRD 419          
BLAST of EWM29801.1 vs. NCBI_GenBank
Match: gi|695405581|ref|XP_009523856.1| (hypothetical protein PHYSODRAFT_542338 [Phytophthora sojae] >gi|348681323|gb|EGZ21139.1| hypothetical protein PHYSODRAFT_542338 [Phytophthora sojae])

HSP 1 Score: 587.03 bits (1512), Expect = 0.000e+0
Identity = 268/431 (62.18%), Postives = 342/431 (79.35%), Query Frame = 0
Query:   51 SSKKRVSYFYHGDVGHYYYGPGHPMKPHRLKLTHHLVLGYGLYRKMEVYRPHIATTQELQKFHSQEYVNFLSRVNPDMGRTLSSSVHSKFNVGEYTDCPIFDGMMEFCKIYTGCSIDGAQKLNHKITDVAVNWSGGLHHAKKGEASGFCYINDIVLAILELLKYHPRVLYIDIDIHHGDGVEEAFYCTDRVMTVSFHRYGDFFPGTGNIKDVGAKNGKYYSVNVPLEEGIDDASYERVFRPVMAKVMEVYQPSAVVLQCGADSLSGDRLGCFNLTLRGHAKCVEMMKGYNVPLLILGGGGYAIRNVARCWAFETSVLLEEEVSDEIPRNDYYDYYAPDYKLHLPPG-TTENQNSTEGLEAIKVQILQQLSQIPGAPSVQMQEVPPDWATNERGGGEDE--EDPDVRSSNRNRFGGERREHEAEFYDGGKDQ 478
            ++KKRVSYFYH + GH+YYGPGHPMKPHR+KL HHLV+ Y LYRKM+++ PHIA+ +E++ FH+ +Y++FL R++P   + L++ +  K+N+GE TDCP+FDG+ +FC+IY+G ++D   +LNH   D+A+NW+GGLHHAKK E SGFCY+NDIVL ILELLKYHPRVLYIDID+HHGDGVEEAFY TDRVMTVSFH+YGDFFPGTG+IKD+G KNGKYY+VN PL  G++D SYE VF+PV+ KVME + PSAVVLQCGADSL+GDRLGCFN+T RGH +CV+ +K + +P+L+LGGGGY IRNV+R WA+ETS+LL+EEVS+ IP NDY+++YAP++KLHL P    EN NS E L+  K +I + L  + GAPSVQM + PP     E    EDE   DPD R+ N       +R+HEAEFY  GKDQ
Sbjct:    4 ATKKRVSYFYHPEEGHFYYGPGHPMKPHRMKLAHHLVVNYDLYRKMDIFEPHIASAEEIKNFHAPDYIDFLQRISPSNQKDLATELQ-KYNLGELTDCPVFDGIFDFCQIYSGGTLDAVSRLNHGQCDIAINWAGGLHHAKKSEGSGFCYVNDIVLGILELLKYHPRVLYIDIDVHHGDGVEEAFYVTDRVMTVSFHKYGDFFPGTGDIKDIGTKNGKYYAVNFPLLSGMNDESYESVFKPVIQKVMETFAPSAVVLQCGADSLTGDRLGCFNVTTRGHGECVKFVKSFGLPMLVLGGGGYTIRNVSRAWAYETSILLDEEVSNNIPYNDYFEFYAPNFKLHLEPDPDLENANSREYLDECKTKIFENLRALTGAPSVQMSQAPPTHMLRE----EDEYAADPDSRTDNDG-----KRQHEAEFYRDGKDQ 424          
BLAST of EWM29801.1 vs. NCBI_GenBank
Match: gi|301121530|ref|XP_002908492.1| (histone deacetylase, putative [Phytophthora infestans T30-4] >gi|262103523|gb|EEY61575.1| histone deacetylase, putative [Phytophthora infestans T30-4])

HSP 1 Score: 586.645 bits (1511), Expect = 0.000e+0
Identity = 267/429 (62.24%), Postives = 339/429 (79.02%), Query Frame = 0
Query:   51 SSKKRVSYFYHGDVGHYYYGPGHPMKPHRLKLTHHLVLGYGLYRKMEVYRPHIATTQELQKFHSQEYVNFLSRVNPDMGRTLSSSVHSKFNVGEYTDCPIFDGMMEFCKIYTGCSIDGAQKLNHKITDVAVNWSGGLHHAKKGEASGFCYINDIVLAILELLKYHPRVLYIDIDIHHGDGVEEAFYCTDRVMTVSFHRYGDFFPGTGNIKDVGAKNGKYYSVNVPLEEGIDDASYERVFRPVMAKVMEVYQPSAVVLQCGADSLSGDRLGCFNLTLRGHAKCVEMMKGYNVPLLILGGGGYAIRNVARCWAFETSVLLEEEVSDEIPRNDYYDYYAPDYKLHLPPG-TTENQNSTEGLEAIKVQILQQLSQIPGAPSVQMQEVPPDWATNERGGGEDEEDPDVRSSNRNRFGGERREHEAEFYDGGKDQ 478
            ++KKRVSYFYH + GH+YYGPGHPMKPHR+KL HHLV+ Y LYRKM+++ PHIA+ +E++ FH+ +Y++FL R++P   + L+S +  K+N+GE TDCP+FDG+ +FC+IY+G ++D   +LNH   D+A+NW+GGLHHAKK E SGFCY+NDIVL ILELLKYHPRVLYIDID+HHGDGVEEAFY TDRVMTVSFH+YGDFFPGTG+IKD+G KNGKYY+VN PL  G+ D SYE VF+PV+ KVME + PSAVVLQCGADSL+GDRLGCFN+T RGH +CV+ +K + +P+L+LGGGGY IRNV+R WA+ETS+LL+EEVS+ IP NDY+++YAP++KLHL P    EN NS E L+  K +I + L  + GAPSVQM + PP     E    ED  DPD R+ N       +R+HEAEFY   KDQ
Sbjct:    4 ATKKRVSYFYHPEEGHFYYGPGHPMKPHRMKLAHHLVVNYDLYRKMDIFEPHIASAEEIKAFHAPDYIDFLQRISPSNQKDLTSELQ-KYNLGELTDCPVFDGIFDFCQIYSGGTLDAVSRLNHGQCDIAINWAGGLHHAKKLEGSGFCYVNDIVLGILELLKYHPRVLYIDIDVHHGDGVEEAFYVTDRVMTVSFHKYGDFFPGTGDIKDIGTKNGKYYAVNFPLLSGMTDESYESVFKPVIQKVMETFCPSAVVLQCGADSLTGDRLGCFNVTTRGHGECVKFVKSFGLPMLVLGGGGYTIRNVSRAWAYETSILLDEEVSNNIPYNDYFEFYAPNFKLHLEPDPDLENANSREYLDECKYKIFENLRALTGAPSVQMSQAPPTHMLREE--DEDAADPDARTDNDG-----KRQHEAEFYRDDKDQ 424          
BLAST of EWM29801.1 vs. NCBI_GenBank
Match: gi|567999305|gb|ETL49347.1| (hypothetical protein L916_01156 [Phytophthora parasitica] >gi|570960996|gb|ETP25975.1| hypothetical protein F441_01217 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 586.645 bits (1511), Expect = 0.000e+0
Identity = 266/429 (62.00%), Postives = 340/429 (79.25%), Query Frame = 0
Query:   51 SSKKRVSYFYHGDVGHYYYGPGHPMKPHRLKLTHHLVLGYGLYRKMEVYRPHIATTQELQKFHSQEYVNFLSRVNPDMGRTLSSSVHSKFNVGEYTDCPIFDGMMEFCKIYTGCSIDGAQKLNHKITDVAVNWSGGLHHAKKGEASGFCYINDIVLAILELLKYHPRVLYIDIDIHHGDGVEEAFYCTDRVMTVSFHRYGDFFPGTGNIKDVGAKNGKYYSVNVPLEEGIDDASYERVFRPVMAKVMEVYQPSAVVLQCGADSLSGDRLGCFNLTLRGHAKCVEMMKGYNVPLLILGGGGYAIRNVARCWAFETSVLLEEEVSDEIPRNDYYDYYAPDYKLHLPPG-TTENQNSTEGLEAIKVQILQQLSQIPGAPSVQMQEVPPDWATNERGGGEDEEDPDVRSSNRNRFGGERREHEAEFYDGGKDQ 478
            ++KKRVSYFYH + GH+YYGPGHPMKPHR+KL HHLV+ Y LYRKM+++ PHIA+ +E++ FH+ +Y++FL +++P   + L+S +  K+N+GE TDCP+FDG+ +FC+IY+G ++D   +LNH   D+A+NW+GGLHHAKK E SGFCY+NDIVL ILELLKYHPRVLYIDID+HHGDGVEEAFY TDRVMTVSFH+YGDFFPGTG+IKD+G KNGKYY+VN PL  G++D SYE VF+PV+ KVME + PSAVVLQCGADSL+GDRLGCFN+T RGH +CV+ +K + +P+L+LGGGGY IRNV+R WA+ETS+LL+EEVS+ IP NDY+++YAP++KLHL P    EN NS E L+  K +I + L  + GAPSVQM + PP     E    ED  DPD R+ N       +R+HEAEFY   KDQ
Sbjct:    4 ATKKRVSYFYHPEEGHFYYGPGHPMKPHRMKLAHHLVVNYDLYRKMDIFEPHIASAEEIKAFHAPDYIDFLQKISPSNQKDLTSELQ-KYNLGELTDCPVFDGIFDFCQIYSGGTLDAVSRLNHGQCDIAINWAGGLHHAKKSEGSGFCYVNDIVLGILELLKYHPRVLYIDIDVHHGDGVEEAFYVTDRVMTVSFHKYGDFFPGTGDIKDIGTKNGKYYAVNFPLLSGMNDESYESVFKPVIQKVMETFCPSAVVLQCGADSLTGDRLGCFNVTTRGHGECVKFVKSFGLPMLVLGGGGYTIRNVSRAWAYETSILLDEEVSNNIPYNDYFEFYAPNFKLHLEPDPDLENANSKEYLDECKHKIFENLRALTGAPSVQMNQAPPTHMLREE--DEDAADPDSRTDNDG-----KRQHEAEFYRDDKDQ 424          
BLAST of EWM29801.1 vs. NCBI_GenBank
Match: gi|566033258|gb|ETI56169.1| (hypothetical protein F443_01243 [Phytophthora parasitica P1569] >gi|567970949|gb|ETK95966.1| hypothetical protein L915_01172 [Phytophthora parasitica] >gi|568028461|gb|ETM02402.1| hypothetical protein L917_01126 [Phytophthora parasitica] >gi|568059061|gb|ETM55647.1| hypothetical protein L914_01165 [Phytophthora parasitica] >gi|570336966|gb|ETO84914.1| hypothetical protein F444_01241 [Phytophthora parasitica P1976] >gi|570997650|gb|ETP53983.1| hypothetical protein F442_01176 [Phytophthora parasitica P10297])

HSP 1 Score: 586.26 bits (1510), Expect = 0.000e+0
Identity = 266/429 (62.00%), Postives = 340/429 (79.25%), Query Frame = 0
Query:   51 SSKKRVSYFYHGDVGHYYYGPGHPMKPHRLKLTHHLVLGYGLYRKMEVYRPHIATTQELQKFHSQEYVNFLSRVNPDMGRTLSSSVHSKFNVGEYTDCPIFDGMMEFCKIYTGCSIDGAQKLNHKITDVAVNWSGGLHHAKKGEASGFCYINDIVLAILELLKYHPRVLYIDIDIHHGDGVEEAFYCTDRVMTVSFHRYGDFFPGTGNIKDVGAKNGKYYSVNVPLEEGIDDASYERVFRPVMAKVMEVYQPSAVVLQCGADSLSGDRLGCFNLTLRGHAKCVEMMKGYNVPLLILGGGGYAIRNVARCWAFETSVLLEEEVSDEIPRNDYYDYYAPDYKLHLPPG-TTENQNSTEGLEAIKVQILQQLSQIPGAPSVQMQEVPPDWATNERGGGEDEEDPDVRSSNRNRFGGERREHEAEFYDGGKDQ 478
            ++KKRVSYFYH + GH+YYGPGHPMKPHR+KL HHLV+ Y LYRKM+++ PHIA+ +E++ FH+ +Y++FL +++P   + L+S +  K+N+GE TDCP+FDG+ +FC+IY+G ++D   +LNH   D+A+NW+GGLHHAKK E SGFCY+NDIVL ILELLKYHPRVLYIDID+HHGDGVEEAFY TDRVMTVSFH+YGDFFPGTG+IKD+G KNGKYY+VN PL  G++D SYE VF+PV+ KVME + PSAVVLQCGADSL+GDRLGCFN+T RGH +CV+ +K + +P+L+LGGGGY IRNV+R WA+ETS+LL+EEVS+ IP NDY+++YAP++KLHL P    EN NS E L+  K +I + L  + GAPSVQM + PP     E    ED  DPD R+ N       +R+HEAEFY   KDQ
Sbjct:    4 ATKKRVSYFYHPEEGHFYYGPGHPMKPHRMKLAHHLVVNYDLYRKMDIFEPHIASAEEIKAFHAPDYIDFLQKISPSNQKDLTSELQ-KYNLGELTDCPVFDGIFDFCQIYSGGTLDAVSRLNHGQCDIAINWAGGLHHAKKSEGSGFCYVNDIVLGILELLKYHPRVLYIDIDVHHGDGVEEAFYVTDRVMTVSFHKYGDFFPGTGDIKDIGTKNGKYYAVNFPLLSGMNDESYESVFKPVIQKVMETFCPSAVVLQCGADSLTGDRLGCFNVTTRGHGECVKFVKSFGLPMLVLGGGGYTIRNVSRAWAYETSILLDEEVSNNIPYNDYFEFYAPNFKLHLEPDPDLENANSKEYLDECKHKIFENLRALTGAPSVQMNQAPPTHMLREE--DEDAADPDSRTDNDG-----KRQHEAEFYRDDKDQ 424          
BLAST of EWM29801.1 vs. NCBI_GenBank
Match: gi|675164025|ref|XP_008890897.1| (hypothetical protein PPTG_01052 [Phytophthora parasitica INRA-310] >gi|568110270|gb|ETN24877.1| hypothetical protein PPTG_01052 [Phytophthora parasitica INRA-310])

HSP 1 Score: 585.104 bits (1507), Expect = 0.000e+0
Identity = 265/429 (61.77%), Postives = 340/429 (79.25%), Query Frame = 0
Query:   51 SSKKRVSYFYHGDVGHYYYGPGHPMKPHRLKLTHHLVLGYGLYRKMEVYRPHIATTQELQKFHSQEYVNFLSRVNPDMGRTLSSSVHSKFNVGEYTDCPIFDGMMEFCKIYTGCSIDGAQKLNHKITDVAVNWSGGLHHAKKGEASGFCYINDIVLAILELLKYHPRVLYIDIDIHHGDGVEEAFYCTDRVMTVSFHRYGDFFPGTGNIKDVGAKNGKYYSVNVPLEEGIDDASYERVFRPVMAKVMEVYQPSAVVLQCGADSLSGDRLGCFNLTLRGHAKCVEMMKGYNVPLLILGGGGYAIRNVARCWAFETSVLLEEEVSDEIPRNDYYDYYAPDYKLHLPPG-TTENQNSTEGLEAIKVQILQQLSQIPGAPSVQMQEVPPDWATNERGGGEDEEDPDVRSSNRNRFGGERREHEAEFYDGGKDQ 478
            ++KKRVSYFYH + GH+YYGPGHPMKPHR+KL HHLV+ Y LYRKM+++ PHIA+ +E++ FH+ +Y++FL +++P   + L+S +  K+N+G+ TDCP+FDG+ +FC+IY+G ++D   +LNH   D+A+NW+GGLHHAKK E SGFCY+NDIVL ILELLKYHPRVLYIDID+HHGDGVEEAFY TDRVMTVSFH+YGDFFPGTG+IKD+G KNGKYY+VN PL  G++D SYE VF+PV+ KVME + PSAVVLQCGADSL+GDRLGCFN+T RGH +CV+ +K + +P+L+LGGGGY IRNV+R WA+ETS+LL+EEVS+ IP NDY+++YAP++KLHL P    EN NS E L+  K +I + L  + GAPSVQM + PP     E    ED  DPD R+ N       +R+HEAEFY   KDQ
Sbjct:    4 ATKKRVSYFYHPEEGHFYYGPGHPMKPHRMKLAHHLVVNYDLYRKMDIFEPHIASAEEIKAFHAPDYIDFLQKISPSNQKDLTSELQ-KYNLGDLTDCPVFDGIFDFCQIYSGGTLDAVSRLNHGQCDIAINWAGGLHHAKKSEGSGFCYVNDIVLGILELLKYHPRVLYIDIDVHHGDGVEEAFYVTDRVMTVSFHKYGDFFPGTGDIKDIGTKNGKYYAVNFPLLSGMNDESYESVFKPVIQKVMETFCPSAVVLQCGADSLTGDRLGCFNVTTRGHGECVKFVKSFGLPMLVLGGGGYTIRNVSRAWAYETSILLDEEVSNNIPYNDYFEFYAPNFKLHLEPDPDLENANSKEYLDECKHKIFENLRALTGAPSVQMNQAPPTHMLREE--DEDAADPDSRTDNDG-----KRQHEAEFYRDDKDQ 424          
The following BLAST results are available for this feature:
BLAST of EWM29801.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112382|gb|EWM29801.1|0.000e+0100.00histone deacetylase 1 [Nannochloropsis gaditana][more]
gi|325179608|emb|CCA14006.1|0.000e+062.50histone deacetylase putative [Albugo laibachii Nc1... [more]
gi|397599110|gb|EJK57351.1|0.000e+064.92hypothetical protein THAOC_22614 [Thalassiosira oc... [more]
gi|953501137|emb|CEG37507.1|0.000e+062.00histone deacetylase [Plasmopara halstedii][more]
gi|223995841|ref|XP_002287594.1|0.000e+064.03histone deactylase 1 HDAC Hda1p HDA1, partial [Tha... [more]
gi|695405581|ref|XP_009523856.1|0.000e+062.18hypothetical protein PHYSODRAFT_542338 [Phytophtho... [more]
gi|301121530|ref|XP_002908492.1|0.000e+062.24histone deacetylase, putative [Phytophthora infest... [more]
gi|567999305|gb|ETL49347.1|0.000e+062.00hypothetical protein L916_01156 [Phytophthora para... [more]
gi|566033258|gb|ETI56169.1|0.000e+062.00hypothetical protein F443_01243 [Phytophthora para... [more]
gi|675164025|ref|XP_008890897.1|0.000e+061.77hypothetical protein PPTG_01052 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna849rna849Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications