EWM29818.1, cds848 (CDS) Nannochloropsis gaditana

Overview
NameEWM29818.1
Unique Namecds848
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:563519..565294 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29818.1
Productania-6a type cyclin
Orig transcript idgnl|cribi|Naga_100017g39.316.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:563519..565294 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Biological Process
TermDefinition
GO:0007049cell cycle
GO:0006139nucleobase-containing compound metabolic process
GO:0009058biosynthetic process
GO:0006464cellular protein modification process
GO:0006355regulation of transcription, DNA-templated
GO:0000079regulation of cyclin-dependent protein serine/threonine kinase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005575cellular_component
Vocabulary: Molecular Function
TermDefinition
GO:0030234enzyme regulator activity
GO:0005515protein binding
GO:0019901protein kinase binding
Vocabulary: INTERPRO
TermDefinition
IPR015429Cyclin_C/H/T/L
IPR013763Cyclin-like
Homology
BLAST of EWM29818.1 vs. NCBI_GenBank
Match: gi|585112399|gb|EWM29818.1| (ania-6a type cyclin [Nannochloropsis gaditana])

HSP 1 Score: 1182.16 bits (3057), Expect = 0.000e+0
Identity = 591/591 (100.00%), Postives = 591/591 (100.00%), Query Frame = 0
Query:    1 MVQASPLVPTAPAQAEEAPATKEDVSLGELDGLEDVSVDGEWHEVVLLPRHVLRESPSRRLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRALTSERAQDVPEPGPGKSPRVFLFDAFTVAMGCVFLASKLEEKPRAPRDVLFVFHHMCRRRRGLGPSLLEVTSVRYHDLREALLMIEKYVLKELGFGFYSIMDHPHKFILYYIKTLDGTPTLAQRAWNYLNDSLRLDCCVRFRAELIACTALYMASRDLGVKLPDDPPWFALFGASLEEMRHVGNVILSLYREKDEEGEEAPLRWLEPLHPGSLVAMEALRKVEGKEGKEGKGKGQGESTDSPGAMEVDGAEEGSEKHGGGGASKEGERGEGGKGFKGRRDVGEAVGARGARSMEENGDGECGEEGGISKATDQVSGARLSRSPSAPFSPPSSSSPPRLRPVSAAGGKKRSGLSSPRSNRPRRQSSSPASRSRSRSWGRDGRGRSEVQRQGHRRSRSRSRSQGKGRGRERGSGGEREYRGGSRHDKRHRRHRRDGGDKDGFHARRNREGEDLRARDWRNEPESKERRKYEDKIRERRRDHSRER 591
            MVQASPLVPTAPAQAEEAPATKEDVSLGELDGLEDVSVDGEWHEVVLLPRHVLRESPSRRLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRALTSERAQDVPEPGPGKSPRVFLFDAFTVAMGCVFLASKLEEKPRAPRDVLFVFHHMCRRRRGLGPSLLEVTSVRYHDLREALLMIEKYVLKELGFGFYSIMDHPHKFILYYIKTLDGTPTLAQRAWNYLNDSLRLDCCVRFRAELIACTALYMASRDLGVKLPDDPPWFALFGASLEEMRHVGNVILSLYREKDEEGEEAPLRWLEPLHPGSLVAMEALRKVEGKEGKEGKGKGQGESTDSPGAMEVDGAEEGSEKHGGGGASKEGERGEGGKGFKGRRDVGEAVGARGARSMEENGDGECGEEGGISKATDQVSGARLSRSPSAPFSPPSSSSPPRLRPVSAAGGKKRSGLSSPRSNRPRRQSSSPASRSRSRSWGRDGRGRSEVQRQGHRRSRSRSRSQGKGRGRERGSGGEREYRGGSRHDKRHRRHRRDGGDKDGFHARRNREGEDLRARDWRNEPESKERRKYEDKIRERRRDHSRER
Sbjct:    1 MVQASPLVPTAPAQAEEAPATKEDVSLGELDGLEDVSVDGEWHEVVLLPRHVLRESPSRRLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRALTSERAQDVPEPGPGKSPRVFLFDAFTVAMGCVFLASKLEEKPRAPRDVLFVFHHMCRRRRGLGPSLLEVTSVRYHDLREALLMIEKYVLKELGFGFYSIMDHPHKFILYYIKTLDGTPTLAQRAWNYLNDSLRLDCCVRFRAELIACTALYMASRDLGVKLPDDPPWFALFGASLEEMRHVGNVILSLYREKDEEGEEAPLRWLEPLHPGSLVAMEALRKVEGKEGKEGKGKGQGESTDSPGAMEVDGAEEGSEKHGGGGASKEGERGEGGKGFKGRRDVGEAVGARGARSMEENGDGECGEEGGISKATDQVSGARLSRSPSAPFSPPSSSSPPRLRPVSAAGGKKRSGLSSPRSNRPRRQSSSPASRSRSRSWGRDGRGRSEVQRQGHRRSRSRSRSQGKGRGRERGSGGEREYRGGSRHDKRHRRHRRDGGDKDGFHARRNREGEDLRARDWRNEPESKERRKYEDKIRERRRDHSRER 591          
BLAST of EWM29818.1 vs. NCBI_GenBank
Match: gi|553190491|ref|XP_005855202.1| (ania-6a type cyclin, partial [Nannochloropsis gaditana CCMP526] >gi|422293857|gb|EKU21157.1| ania-6a type cyclin, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 767.689 bits (1981), Expect = 0.000e+0
Identity = 375/375 (100.00%), Postives = 375/375 (100.00%), Query Frame = 0
Query:    1 MVQASPLVPTAPAQAEEAPATKEDVSLGELDGLEDVSVDGEWHEVVLLPRHVLRESPSRRLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRALTSERAQDVPEPGPGKSPRVFLFDAFTVAMGCVFLASKLEEKPRAPRDVLFVFHHMCRRRRGLGPSLLEVTSVRYHDLREALLMIEKYVLKELGFGFYSIMDHPHKFILYYIKTLDGTPTLAQRAWNYLNDSLRLDCCVRFRAELIACTALYMASRDLGVKLPDDPPWFALFGASLEEMRHVGNVILSLYREKDEEGEEAPLRWLEPLHPGSLVAMEALRKVEGKEGKEGKGKGQGESTDSPGAMEVDGAEEGSEKHGGGGASKEGE 375
            MVQASPLVPTAPAQAEEAPATKEDVSLGELDGLEDVSVDGEWHEVVLLPRHVLRESPSRRLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRALTSERAQDVPEPGPGKSPRVFLFDAFTVAMGCVFLASKLEEKPRAPRDVLFVFHHMCRRRRGLGPSLLEVTSVRYHDLREALLMIEKYVLKELGFGFYSIMDHPHKFILYYIKTLDGTPTLAQRAWNYLNDSLRLDCCVRFRAELIACTALYMASRDLGVKLPDDPPWFALFGASLEEMRHVGNVILSLYREKDEEGEEAPLRWLEPLHPGSLVAMEALRKVEGKEGKEGKGKGQGESTDSPGAMEVDGAEEGSEKHGGGGASKEGE
Sbjct:    1 MVQASPLVPTAPAQAEEAPATKEDVSLGELDGLEDVSVDGEWHEVVLLPRHVLRESPSRRLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRALTSERAQDVPEPGPGKSPRVFLFDAFTVAMGCVFLASKLEEKPRAPRDVLFVFHHMCRRRRGLGPSLLEVTSVRYHDLREALLMIEKYVLKELGFGFYSIMDHPHKFILYYIKTLDGTPTLAQRAWNYLNDSLRLDCCVRFRAELIACTALYMASRDLGVKLPDDPPWFALFGASLEEMRHVGNVILSLYREKDEEGEEAPLRWLEPLHPGSLVAMEALRKVEGKEGKEGKGKGQGESTDSPGAMEVDGAEEGSEKHGGGGASKEGE 375          
BLAST of EWM29818.1 vs. NCBI_GenBank
Match: gi|298715506|emb|CBJ28076.1| (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 292.352 bits (747), Expect = 5.239e-88
Identity = 145/285 (50.88%), Postives = 185/285 (64.91%), Query Frame = 0
Query:   39 DGEWHEVVLLPRHVLRESPSRRLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRALTSERAQDVPEPGPGKSPRVFLFDAFTVAMGCVFLASKLEEKPRAPRDVLFVFHHMCRRRRGLGPSLLEVTSVRYHDLREALLMIEKYVLKELGFGFYSIMDHPHKFILYYIKTL--DGTPTLAQRAWNYLNDSLRLDCCVRFRAELIACTALYMASRDLGVKLPDDPPWFALFGASLEEMRHVGNVILSLYREKDEEGEEAPLRWLEPLHPGSL 321
            D  WH  ++LPR +L   PS    V    E  HRI+GCEL+QEAG+LLR PQVVM TAQ L  RFFYR+ LT                    FDAF+VAMGC+ LA K+EE PR PR V+ VFH M  RR G+ P+++ +       LR+ +L +E +VLKELGFGFY+IMDHPHKFILYY++ L  D    ++QRAWNY+NDSLR D  +RFR+E+IAC A+YMASR LG+KLPD+PPW+ LF A ++EM  + N IL+LY           + +LEPL   S+
Sbjct:   58 DEAWHRTIILPRDILDNPPSGEHEVDWETESSHRIWGCELLQEAGVLLRLPQVVMCTAQNLLQRFFYRKPLTK-------------------FDAFSVAMGCMLLAMKIEEDPRQPRAVVLVFHRMFERRIGVDPAIV-IPPESLRVLRDEMLRVELHVLKELGFGFYNIMDHPHKFILYYLRVLELDIEGDVSQRAWNYVNDSLRTDLSLRFRSEVIACAAIYMASRSLGIKLPDNPPWWVLFNADMQEMGEICNTILALYHRPK-------VAFLEPLCDNSV 315          
BLAST of EWM29818.1 vs. NCBI_GenBank
Match: gi|953489021|emb|CEG47564.1| (ania-6a type cyclin [Plasmopara halstedii])

HSP 1 Score: 272.322 bits (695), Expect = 2.656e-82
Identity = 136/275 (49.45%), Postives = 181/275 (65.82%), Query Frame = 0
Query:   46 VLLPRHVLRESPSRRLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRALTSERAQDVPEPGPGKSPRVFLFDAFTVAMGCVFLASKLEEKPRAPRDVLFVFHHMCRRRR----GLGPSLLEVTSVRYHDLREALLMIEKYVLKELGFGFYSIMDHPHKFILYYIKTLDGTPTLAQRAWNYLNDSLRLDCCVRFRAELIACTALYMASRDLGVKLPDDPPWFALFGASLEEMRHVGNVILSLYREKDEEGEEAPLRWLEPL 316
            VLLP   L  SPS   GVP AVER HR FGCELIQEAG+LLR PQVVMATAQTL  RFFYR++L                     FDAF VA+ C+FLA+K+EEKP+  +DV+ VF+ M RRR+     +   L+++    +   R  L+M+E+ VL +LGF  YSI +HPHK++LYY+K LDG   LAQ+AW Y+NDSLR D CVR++A+ IAC A+++ASR L V LP++PPW+ LF  +  ++  V  VI+ LY+++        L+W+EPL
Sbjct:   10 VLLPTPSLARSPSLEDGVPPAVERMHRSFGCELIQEAGVLLRLPQVVMATAQTLLQRFFYRKSLRQ-------------------FDAFRVAVSCLFLAAKVEEKPKRIKDVVSVFYAMYRRRKWHCSTVAQQLVDLDGATFSQWRMWLIMVERQVLIDLGFSIYSITEHPHKYVLYYVKVLDGRSALAQQAWGYINDSLRTDLCVRYKAQAIACAAIFLASRFLKVALPENPPWYKLFDVNKSQLYAVSIVIMGLYKQEK-------LQWVEPL 258          
BLAST of EWM29818.1 vs. NCBI_GenBank
Match: gi|1214706197|gb|OWZ17776.1| (Cyclin-L1 [Phytophthora megakarya])

HSP 1 Score: 268.855 bits (686), Expect = 5.540e-82
Identity = 131/275 (47.64%), Postives = 181/275 (65.82%), Query Frame = 0
Query:   46 VLLPRHVLRESPSRRLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRALTSERAQDVPEPGPGKSPRVFLFDAFTVAMGCVFLASKLEEKPRAPRDVLFVFHHMCRRRR----GLGPSLLEVTSVRYHDLREALLMIEKYVLKELGFGFYSIMDHPHKFILYYIKTLDGTPTLAQRAWNYLNDSLRLDCCVRFRAELIACTALYMASRDLGVKLPDDPPWFALFGASLEEMRHVGNVILSLYREKDEEGEEAPLRWLEPL 316
            V+LP   L+ SPS   G+    ER HR FGCELIQEAG+LLR PQVV+ATAQTL HRF+YR++L                     FDAF VA+ C+FLA+K+EEKP+  +DVL VF+ M RRR+     +   L++V    +   R  L+M+E+ VL +LGF  Y++ +HPHK++LYY+K LDG+ TLAQ+AW Y+NDSLR D CVR++A++IAC A+++ASR  GV LP++PPW++LF     ++  V   I+ LY+++  E       WLEPL
Sbjct:    8 VVLPASSLQRSPSLEDGISSDTERLHRSFGCELIQEAGVLLRLPQVVLATAQTLLHRFYYRKSLRQ-------------------FDAFRVAVSCLFLAAKVEEKPKRIKDVLGVFYAMLRRRKWRRTTVTQQLVDVDGATFSQWRMWLIMVERQVLIDLGFSVYNVTEHPHKYVLYYVKVLDGSSTLAQQAWGYINDSLRTDLCVRYKAQVIACAAIFLASRFQGVALPENPPWYSLFDVEKTQLYAVSVAIMQLYKQEKVE-------WLEPL 256          
BLAST of EWM29818.1 vs. NCBI_GenBank
Match: gi|695466760|ref|XP_009539474.1| (hypothetical protein PHYSODRAFT_320213 [Phytophthora sojae] >gi|348665270|gb|EGZ05102.1| hypothetical protein PHYSODRAFT_320213 [Phytophthora sojae])

HSP 1 Score: 271.552 bits (693), Expect = 1.884e-81
Identity = 142/311 (45.66%), Postives = 189/311 (60.77%), Query Frame = 0
Query:   46 VLLPRHVLRESPSRRLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRALTSERAQDVPEPGPGKSPRVFLFDAFTVAMGCVFLASKLEEKPRAPRDVLFVFHHMCRRRR----GLGPSLLEVTSVRYHDLREALLMIEKYVLKELGFGFYSIMDHPHKFILYYIKTLDGTPTLAQRAWNYLNDSLRLDCCVRFRAELIACTALYMASRDLGVKLPDDPPWFALFGASLEEMRHVGNVILSLYREKDEEGEEAPLRWLEPLHPGSLVAMEALRKVEGKEG--KEGKGKGQGESTDSP 350
            V+LP  VL  SPSR  GV    ER HR FGCELIQEAG+LLR PQV +ATAQTL  RF+YR++L                     FDAF VA+ C+FLA+K+EEKP+  RDVL VF+ M RRR+     +   L+++    +   R  L+M+E+ VL +LGF  Y++  HPHKF+LYY+K LDG+P LAQ+AW Y+NDSLR D CVR+ A++IAC A+++ASR   V LP+ PPW+ LF     ++  V   I+ LY++   E       WLEPL   +  A++     E +EG  K    KG+ E   SP
Sbjct:    9 VVLPASVLARSPSRADGVSAETERLHRAFGCELIQEAGVLLRLPQVALATAQTLLQRFYYRKSLRQ-------------------FDAFRVAVSCLFLAAKVEEKPKRIRDVLSVFYAMLRRRKWRRTTVAQQLVDLEGATFAQWRMWLIMVERQVLIDLGFSVYNVAQHPHKFVLYYVKVLDGSPQLAQQAWGYINDSLRADLCVRYSAQVIACAAIFLASRFQRVALPERPPWYQLFDVDQAQLYAVSVAIMELYKQPKIE-------WLEPLTETNPFAVDDHPLEEEQEGEPKAVDTKGEAEMEVSP 293          
BLAST of EWM29818.1 vs. NCBI_GenBank
Match: gi|301115704|ref|XP_002905581.1| (cyclin-L1, putative [Phytophthora infestans T30-4] >gi|262110370|gb|EEY68422.1| cyclin-L1, putative [Phytophthora infestans T30-4])

HSP 1 Score: 270.011 bits (689), Expect = 1.938e-81
Identity = 147/358 (41.06%), Postives = 204/358 (56.98%), Query Frame = 0
Query:   46 VLLPRHVLRESPSRRLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRALTSERAQDVPEPGPGKSPRVFLFDAFTVAMGCVFLASKLEEKPRAPRDVLFVFHHMCRRRR----GLGPSLLEVTSVRYHDLREALLMIEKYVLKELGFGFYSIMDHPHKFILYYIKTLDGTPTLAQRAWNYLNDSLRLDCCVRFRAELIACTALYMASRDLGVKLPDDPPWFALFGASLEEMRHVGNVILSLYREKDEEGEEAPLRWLEPL----------HPGSLVAMEALRKVEGKEGKEGKGKGQGESTDSPGAMEVDGAEEGSEKHGGGGASKEGERGEGGKGF-KGRRD 388
            V+LP   L  SPS   GV    ER HR FGCELIQEAG+LLR PQVV ATAQTL  RF+YR++L                     FDAF VA+ C+FLA+K+EEKP+  +DV+ VF+ M RRR+     +   L+++    +   R  L+M+E+ VL +LGF  YS+ +HPHK++LYY+K LDG+  LAQ+AW Y+NDSLR D CVR++A++IAC A+++ASR  GV LP++PPW++LF     ++     VI+ LY+++        ++WLEPL          HP     ME    V+ K  +  K + + E        E   ++E  +K      S E  R     G  K RRD
Sbjct:   10 VVLPAPSLARSPSLEDGVTSTTERLHRSFGCELIQEAGVLLRLPQVVTATAQTLLQRFYYRKSLRQ-------------------FDAFRVAVSCLFLAAKVEEKPKRIKDVIGVFYAMFRRRKWQRSTVSQQLVDLDGATFSQWRMWLIMVERQVLIDLGFSIYSVTEHPHKYVLYYVKVLDGSSALAQQAWGYINDSLRTDLCVRYKAQVIACAAIFLASRFQGVALPENPPWYSLFDVDKTQLYAASVVIMELYKQEK-------IQWLEPLTETNPFEVDDHP-----MEEEEDVQEKVQETAKAEVEKEIAPQEPTTEEKNSQEIKQKLN----SSEKRRSRWDDGLAKSRRD 332          
BLAST of EWM29818.1 vs. NCBI_GenBank
Match: gi|970650977|gb|KUF89889.1| (hypothetical protein AM588_10005054 [Phytophthora nicotianae] >gi|970664542|gb|KUG01430.1| Cyclin-L1-1 [Phytophthora nicotianae])

HSP 1 Score: 266.544 bits (680), Expect = 4.532e-80
Identity = 129/275 (46.91%), Postives = 180/275 (65.45%), Query Frame = 0
Query:   46 VLLPRHVLRESPSRRLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRALTSERAQDVPEPGPGKSPRVFLFDAFTVAMGCVFLASKLEEKPRAPRDVLFVFHHMCRRRR----GLGPSLLEVTSVRYHDLREALLMIEKYVLKELGFGFYSIMDHPHKFILYYIKTLDGTPTLAQRAWNYLNDSLRLDCCVRFRAELIACTALYMASRDLGVKLPDDPPWFALFGASLEEMRHVGNVILSLYREKDEEGEEAPLRWLEPL 316
            V+LP   L  SPS   G+   +ER HR FGCELIQEAG+LLR PQVVMATAQTL  RF+YR++L                     FDAF VA+ C+FLA+K+EEKP+  +DV+ VF+ M RRR+     +   L+++    +   R  L+M+E+ VL +LGF  YS+ +HPHK++LYY+K LDG+  LAQ+AW Y+NDSLR D CVR++A++IAC A+++ASR  GV LP++PPW+ LF     ++  V  VI+ LY+++        ++WLEPL
Sbjct:   10 VVLPASSLARSPSLEDGIKPDIERLHRSFGCELIQEAGVLLRLPQVVMATAQTLLQRFYYRKSLRQ-------------------FDAFRVAVSCLFLAAKVEEKPKRIKDVVGVFYAMFRRRKWQRSTVSQQLVDLDGATFSQWRMWLIMVERQVLIDLGFSIYSVTEHPHKYVLYYVKVLDGSSALAQQAWGYINDSLRTDLCVRYKAQVIACAAIFLASRFQGVALPENPPWYLLFDVDKTQLYAVSVVIMELYKQEK-------IQWLEPL 258          
BLAST of EWM29818.1 vs. NCBI_GenBank
Match: gi|567953240|gb|ETK78897.1| (hypothetical protein L915_15205, partial [Phytophthora parasitica] >gi|567981909|gb|ETL32344.1| hypothetical protein L916_15097, partial [Phytophthora parasitica] >gi|568041318|gb|ETM38737.1| hypothetical protein L914_15064, partial [Phytophthora parasitica] >gi|570943347|gb|ETP08604.1| hypothetical protein F441_15482, partial [Phytophthora parasitica CJ01A1] >gi|570974190|gb|ETP36645.1| hypothetical protein F442_15503, partial [Phytophthora parasitica P10297])

HSP 1 Score: 264.233 bits (674), Expect = 4.192e-79
Identity = 128/275 (46.55%), Postives = 179/275 (65.09%), Query Frame = 0
Query:   46 VLLPRHVLRESPSRRLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRALTSERAQDVPEPGPGKSPRVFLFDAFTVAMGCVFLASKLEEKPRAPRDVLFVFHHMCRRRR----GLGPSLLEVTSVRYHDLREALLMIEKYVLKELGFGFYSIMDHPHKFILYYIKTLDGTPTLAQRAWNYLNDSLRLDCCVRFRAELIACTALYMASRDLGVKLPDDPPWFALFGASLEEMRHVGNVILSLYREKDEEGEEAPLRWLEPL 316
            V+LP   L  SPS    +   +ER HR FGCELIQEAG+LLR PQVVMATAQTL  RF+YR++L                     FDAF VA+ C+FLA+K+EEKP+  +DV+ VF+ M RRR+     +   L+++    +   R  L+M+E+ VL +LGF  YS+ +HPHK++LYY+K LDG+  LAQ+AW Y+NDSLR D CVR++A++IAC A+++ASR  GV LP++PPW+ LF     ++  V  VI+ LY+++        ++WLEPL
Sbjct:   10 VVLPASSLARSPSLEDDIKPDIERLHRSFGCELIQEAGVLLRLPQVVMATAQTLLQRFYYRKSLRQ-------------------FDAFRVAVSCLFLAAKVEEKPKRIKDVVGVFYAMFRRRKWQRSTVSQQLVDLDGATFSQWRMWLIMVERQVLIDLGFSIYSVTEHPHKYVLYYVKVLDGSSALAQQAWGYINDSLRTDLCVRYKAQVIACAAIFLASRFQGVALPENPPWYLLFDVDKTQLYAVSVVIMELYKQEK-------IQWLEPL 258          
BLAST of EWM29818.1 vs. NCBI_GenBank
Match: gi|675172645|ref|XP_008895207.1| (hypothetical protein PPTG_04693, partial [Phytophthora parasitica INRA-310] >gi|566015785|gb|ETI38696.1| hypothetical protein F443_15662, partial [Phytophthora parasitica P1569] >gi|568011409|gb|ETL85587.1| hypothetical protein L917_14927, partial [Phytophthora parasitica] >gi|568104704|gb|ETN19349.1| hypothetical protein PPTG_04693, partial [Phytophthora parasitica INRA-310] >gi|570319511|gb|ETO67459.1| hypothetical protein F444_15644, partial [Phytophthora parasitica P1976])

HSP 1 Score: 263.848 bits (673), Expect = 4.613e-79
Identity = 128/275 (46.55%), Postives = 179/275 (65.09%), Query Frame = 0
Query:   46 VLLPRHVLRESPSRRLGVPEAVERRHRIFGCELIQEAGILLRQPQVVMATAQTLFHRFFYRRALTSERAQDVPEPGPGKSPRVFLFDAFTVAMGCVFLASKLEEKPRAPRDVLFVFHHMCRRRR----GLGPSLLEVTSVRYHDLREALLMIEKYVLKELGFGFYSIMDHPHKFILYYIKTLDGTPTLAQRAWNYLNDSLRLDCCVRFRAELIACTALYMASRDLGVKLPDDPPWFALFGASLEEMRHVGNVILSLYREKDEEGEEAPLRWLEPL 316
            V+LP   L  SPS    +   +ER HR FGCELIQEAG+LLR PQVVMATAQTL  RF+YR++L                     FDAF VA+ C+FLA+K+EEKP+  +DV+ VF+ M RRR+     +   L+++    +   R  L+M+E+ VL +LGF  YS+ +HPHK++LYY+K LDG+  LAQ+AW Y+NDSLR D CVR++A++IAC A+++ASR  GV LP++PPW+ LF     ++  V  VI+ LY+++        ++WLEPL
Sbjct:   10 VVLPASSLARSPSLEDDIKPDIERLHRSFGCELIQEAGVLLRLPQVVMATAQTLLQRFYYRKSLRQ-------------------FDAFRVAVSCLFLAAKVEEKPKRIKDVVGVFYAMFRRRKWQRSTVSQQLVDLDGATFSQWRMWLIMVERQVLIDLGFSIYSVTEHPHKYVLYYVKVLDGSSALAQQAWGYINDSLRTDLCVRYKAQVIACAAIFLASRFQGVALPENPPWYLLFDVDKTQLYAVSVVIMELYKQEK-------IQWLEPL 258          
The following BLAST results are available for this feature:
BLAST of EWM29818.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112399|gb|EWM29818.1|0.000e+0100.00ania-6a type cyclin [Nannochloropsis gaditana][more]
gi|553190491|ref|XP_005855202.1|0.000e+0100.00ania-6a type cyclin, partial [Nannochloropsis gadi... [more]
gi|298715506|emb|CBJ28076.1|5.239e-8850.88conserved unknown protein [Ectocarpus siliculosus][more]
gi|953489021|emb|CEG47564.1|2.656e-8249.45ania-6a type cyclin [Plasmopara halstedii][more]
gi|1214706197|gb|OWZ17776.1|5.540e-8247.64Cyclin-L1 [Phytophthora megakarya][more]
gi|695466760|ref|XP_009539474.1|1.884e-8145.66hypothetical protein PHYSODRAFT_320213 [Phytophtho... [more]
gi|301115704|ref|XP_002905581.1|1.938e-8141.06cyclin-L1, putative [Phytophthora infestans T30-4]... [more]
gi|970650977|gb|KUF89889.1|4.532e-8046.91hypothetical protein AM588_10005054 [Phytophthora ... [more]
gi|567953240|gb|ETK78897.1|4.192e-7946.55hypothetical protein L915_15205, partial [Phytopht... [more]
gi|675172645|ref|XP_008895207.1|4.613e-7946.55hypothetical protein PPTG_04693, partial [Phytopht... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna848rna848Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications