EWM22199.1, cds8476 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22199.1 vs. NCBI_GenBank
Match: gi|585102638|gb|EWM22199.1| (Endonuclease/exonuclease/phosphatase [Nannochloropsis gaditana]) HSP 1 Score: 652.129 bits (1681), Expect = 0.000e+0 Identity = 319/319 (100.00%), Postives = 319/319 (100.00%), Query Frame = 0
Query: 1 MGTFDFEMREAFDRKDNPFKPLQDRYPALRAILCEKLTTVGQIVLLRLEEEEEDGQERLLLVGNTHLFYHPMAQHIRLMQMATLVREMTARQGEIEDKFGVRPRLVLCGDLNSTPTTATIRYLRGETIGPEDEVWEHLHVFGWGKRQGEGEEKEEGEAAATAAVLEAEEGKKGGEEGGDGKAVAVDVGRESRGRETLLSSRATPRVEAREEKEKEKNSKEKGSMASDGDVIPTLCLTRPFFSACGLPDFTNYVQGFVETLDYIFLESEAPVPLDPSGASFSVLSVGAMPTREEAGQDTALPSWQTPSDHVSILCDVRVE 319
MGTFDFEMREAFDRKDNPFKPLQDRYPALRAILCEKLTTVGQIVLLRLEEEEEDGQERLLLVGNTHLFYHPMAQHIRLMQMATLVREMTARQGEIEDKFGVRPRLVLCGDLNSTPTTATIRYLRGETIGPEDEVWEHLHVFGWGKRQGEGEEKEEGEAAATAAVLEAEEGKKGGEEGGDGKAVAVDVGRESRGRETLLSSRATPRVEAREEKEKEKNSKEKGSMASDGDVIPTLCLTRPFFSACGLPDFTNYVQGFVETLDYIFLESEAPVPLDPSGASFSVLSVGAMPTREEAGQDTALPSWQTPSDHVSILCDVRVE
Sbjct: 1 MGTFDFEMREAFDRKDNPFKPLQDRYPALRAILCEKLTTVGQIVLLRLEEEEEDGQERLLLVGNTHLFYHPMAQHIRLMQMATLVREMTARQGEIEDKFGVRPRLVLCGDLNSTPTTATIRYLRGETIGPEDEVWEHLHVFGWGKRQGEGEEKEEGEAAATAAVLEAEEGKKGGEEGGDGKAVAVDVGRESRGRETLLSSRATPRVEAREEKEKEKNSKEKGSMASDGDVIPTLCLTRPFFSACGLPDFTNYVQGFVETLDYIFLESEAPVPLDPSGASFSVLSVGAMPTREEAGQDTALPSWQTPSDHVSILCDVRVE 319
BLAST of EWM22199.1 vs. NCBI_GenBank
Match: gi|553185093|ref|XP_005854200.1| (2 -phosphodiesterase 12-like protein [Nannochloropsis gaditana CCMP526] >gi|422294864|gb|EKU22164.1| 2 -phosphodiesterase 12-like protein [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 564.303 bits (1453), Expect = 0.000e+0 Identity = 285/319 (89.34%), Postives = 286/319 (89.66%), Query Frame = 0
Query: 1 MGTFDFEMREAFDRKDNPFKPLQDRYPALRAILCEKLTTVGQIVLLRLEEEEEDGQERLLLVGNTHLFYHPMAQHIRLMQMATLVREMTARQGEIEDKFGVRPRLVLCGDLNSTPTTATIRYLRGETIGPEDEVWEHLHVFGWGKRQGEGEEKEEGEAAATAAVLEAEEGKKGGEEGGDGKAVAVDVGRESRGRETLLSSRATPRVEAREEKEKEKNSKEKGSMASDGDVIPTLCLTRPFFSACGLPDFTNYVQGFVETLDYIFLESEAPVPLDPSGASFSVLSVGAMPTREEAGQDTALPSWQTPSDHVSILCDVRVE 319
MGTFDFEMREAFDRKDNPFKPLQDRYPALRAILCEKLTTVGQIVLLRLE MATLVREMTARQGEIEDKFGVRPRLVLCGDLNSTPTTATIRYLRGETIGPEDEVWEHLHVFGWGKRQGEGEEKEEGEAAATAAVLEAEEGKKGGEEGGDGKAVAVD GRESRGRETLLSSRATPRVEAREEKEKEKNSKEKGSMASDGDVIPTLCLTRPFFSACGLPDFTNYVQGFVETLDYIFLESEAPVPLDPSGASFSVLSVGAMPTREEAGQDTALPSWQ PSDHVSILCDVRV+
Sbjct: 59 MGTFDFEMREAFDRKDNPFKPLQDRYPALRAILCEKLTTVGQIVLLRLE-------------------------------MATLVREMTARQGEIEDKFGVRPRLVLCGDLNSTPTTATIRYLRGETIGPEDEVWEHLHVFGWGKRQGEGEEKEEGEAAATAAVLEAEEGKKGGEEGGDGKAVAVDDGRESRGRETLLSSRATPRVEAREEKEKEKNSKEKGSMASDGDVIPTLCLTRPFFSACGLPDFTNYVQGFVETLDYIFLESEAPVPLDPSGASFSVLSVGAMPTREEAGQDTALPSWQAPSDHVSILCDVRVQ 346
BLAST of EWM22199.1 vs. NCBI_GenBank
Match: gi|585102639|gb|EWM22200.1| (Endonuclease/exonuclease/phosphatase [Nannochloropsis gaditana]) HSP 1 Score: 553.903 bits (1426), Expect = 0.000e+0 Identity = 272/276 (98.55%), Postives = 273/276 (98.91%), Query Frame = 0
Query: 44 VLLRLEEEEEDGQERLLLVGNTHLFYHPMAQHIRLMQMATLVREMTARQGEIEDKFGVRPRLVLCGDLNSTPTTATIRYLRGETIGPEDEVWEHLHVFGWGKRQGEGEEKEEGEAAATAAVLEAEEGKKGGEEGGDGKAVAVDVGRESRGRETLLSSRATPRVEAREEKEKEKNSKEKGSMASDGDVIPTLCLTRPFFSACGLPDFTNYVQGFVETLDYIFLESEAPVPLDPSGASFSVLSVGAMPTREEAGQDTALPSWQTPSDHVSILCDVRVE 319
VL +EEEEDGQERLLLVGNTHLFYHPMAQHIRLMQMATLVREMTARQGEIEDKFGVRPRLVLCGDLNSTPTTATIRYLRGETIGPEDEVWEHLHVFGWGKRQGEGEEKEEGEAAATAAVLEAEEGKKGGEEGGDGKAVAVDVGRESRGRETLLSSRATPRVEAREEKEKEKNSKEKGSMASDGDVIPTLCLTRPFFSACGLPDFTNYVQGFVETLDYIFLESEAPVPLDPSGASFSVLSVGAMPTREEAGQDTALPSWQTPSDHVSILCDVRVE
Sbjct: 3 VLTARQEEEEDGQERLLLVGNTHLFYHPMAQHIRLMQMATLVREMTARQGEIEDKFGVRPRLVLCGDLNSTPTTATIRYLRGETIGPEDEVWEHLHVFGWGKRQGEGEEKEEGEAAATAAVLEAEEGKKGGEEGGDGKAVAVDVGRESRGRETLLSSRATPRVEAREEKEKEKNSKEKGSMASDGDVIPTLCLTRPFFSACGLPDFTNYVQGFVETLDYIFLESEAPVPLDPSGASFSVLSVGAMPTREEAGQDTALPSWQTPSDHVSILCDVRVE 278
BLAST of EWM22199.1 vs. NCBI_GenBank
Match: gi|298711454|emb|CBJ32593.1| (conserved unknown protein [Ectocarpus siliculosus]) HSP 1 Score: 129.028 bits (323), Expect = 1.467e-29 Identity = 106/358 (29.61%), Postives = 159/358 (44.41%), Query Frame = 0
Query: 5 DFEMREAFDRKDNPFKPLQDRYPALRAILCEKLTTVGQIVLLR---------------LEEEEEDGQERLLLVGNTHLFYHPMAQHIRLMQMATLVREMTARQGEIEDKFGVRPRLVLCGDLNSTPTTATIRYLRGETIGPEDEVWEHLHVFGWGKRQGEGEEKEEGEAAATAAVLEAEEGKKGGEEGGDGKAVAVDVGRESRGRETLLSSRATPR-----VEAREEKEKEKNSKEKGSMASDGDVIPTLCLTRPFFS---ACGLPDFTNYVQGFVETLDYIFLESEAPVPLDPSGASFSVL--------------------SVGAMPTREEA---GQDTALPSWQTPSDHVSILCDV 316
DF M++A ++ F+ L + +P L AI+ ++LTTV Q+ + R E+G L+V NTHL++HP A HIRLMQ+ TLV ++ + ++ + G+RP ++L GDLNS P +RYL G+ IGP+ ++WE++ F WG R + G AA AA + +E +S A+PR E + + GS A +P + R F A G P FTN+ F +TLDY+F+E P+ A+ +VL + P EE LPS PSDHVS++ D+
Sbjct: 382 DFSMKDAIPAQEE-FRGLLEAFPTLSAIVEDRLTTVAQVAVFRPASGCDGGGMAEAGASGGAGEEGSRVRLIVANTHLYFHPNAAHIRLMQLVTLVERISRVRKDLLAR-GLRPAVILGGDLNS-PPDGPVRYLMGDLIGPDSDLWENMGTFKWGDRFFDELPTTSGAAATAAAPPPPPPTSRIPDEK---------------------ASTASPRPNNATNNNDNETARASHPSVAGSKAKPSPFLPNVPYLRTPFDLQLASGTPAFTNFTPDFTDTLDYVFIEGAGADSGTPTTAAEAVLAVEGAGGTGGGGEGGGGGAAAAAVAPMPEEGPLRATTPGLPSETFPSDHVSLVVDL 715
BLAST of EWM22199.1 vs. NCBI_GenBank
Match: gi|308811921|ref|XP_003083268.1| (Glucose-repressible alcohol dehydrogenase transcriptional effector CCR4 and related proteins (ISS) [Ostreococcus tauri]) HSP 1 Score: 113.235 bits (282), Expect = 3.246e-24 Identity = 102/353 (28.90%), Postives = 146/353 (41.36%), Query Frame = 0
Query: 36 KLTTVGQIVLLRLEEEEEDGQERLLLVGNTHLFYHPMAQHIRLMQMATLVREMTARQGEIEDKFGVRPRLVLCGDLNSTPTTATIRYLRGETIGPEDEVWEHLHVFGWGKRQ--------------GEGEEKEEGE-----------------AAATAAVLEAEEGKK---GGEEGGDGKAVAV---------------------------DVGRESRGRETLLSSRATPRVE-AREEKEKEKNSKEKGSMAS----DGD-VIP-----TLCLTRPFFSACGLPDFTNYVQGFVETLDYIFLESEAPVPLDPSGASFSVLSVGAMPTREEAGQDTALPSWQTPSDHVSILCDV 316
K+TTV Q+V ++ + +R + VGN HLF+HP A HIR++Q L+ + TA F L+LCGD N P IRY+ I D W +F WG G G E + + +A L+ G K G + GDG VAV D G E E ++ R + ++ A++E + +S + ++ S DG V+P TL + RP FSA G P++TNYV GFV LDY++ SEA F + +P Q TALP+ PSDH+ ++ DV
Sbjct: 334 KITTVAQLVKVK-----DKSTQREMCVGNCHLFFHPGAMHIRIIQAHELLTQATA--------FADGGPLMLCGDFNGEPEDGVIRYISKGKISAADSDWIRGSLFRWGGTSSREAARSLYYILDDGHGYETDRNYKVENSLELRALVERGICMSLSARTLDENWGAKCKCGSCDDGDGPIVAVKKHVKSGCTFKNCHAVAAFTLRREIGLDPGLEMSEDELAMAKRTSTMMKNAQDEGFRVVSSLQIQALESAAPIDGSTVLPVGCGATLSIPRPLFSAGGFPEWTNYVGGFVGALDYVWCSSEA----------FRPRNFAPLPPMSAVLQSTALPNAVFPSDHIPVVVDV 663
BLAST of EWM22199.1 vs. NCBI_GenBank
Match: gi|693496837|emb|CEG01749.1| (Endonuclease/exonuclease/phosphatase [Ostreococcus tauri] >gi|1199294104|gb|OUS49185.1| glucose-repressible alcohol dehydrogenase transcriptional effector CCR4 [Ostreococcus tauri]) HSP 1 Score: 113.235 bits (282), Expect = 3.663e-24 Identity = 102/353 (28.90%), Postives = 146/353 (41.36%), Query Frame = 0
Query: 36 KLTTVGQIVLLRLEEEEEDGQERLLLVGNTHLFYHPMAQHIRLMQMATLVREMTARQGEIEDKFGVRPRLVLCGDLNSTPTTATIRYLRGETIGPEDEVWEHLHVFGWGKRQ--------------GEGEEKEEGE-----------------AAATAAVLEAEEGKK---GGEEGGDGKAVAV---------------------------DVGRESRGRETLLSSRATPRVE-AREEKEKEKNSKEKGSMAS----DGD-VIP-----TLCLTRPFFSACGLPDFTNYVQGFVETLDYIFLESEAPVPLDPSGASFSVLSVGAMPTREEAGQDTALPSWQTPSDHVSILCDV 316
K+TTV Q+V ++ + +R + VGN HLF+HP A HIR++Q L+ + TA F L+LCGD N P IRY+ I D W +F WG G G E + + +A L+ G K G + GDG VAV D G E E ++ R + ++ A++E + +S + ++ S DG V+P TL + RP FSA G P++TNYV GFV LDY++ SEA F + +P Q TALP+ PSDH+ ++ DV
Sbjct: 345 KITTVAQLVKVK-----DKSTQREMCVGNCHLFFHPGAMHIRIIQAHELLTQATA--------FADGGPLMLCGDFNGEPEDGVIRYISKGKISAADSDWIRGSLFRWGGTSSREAARSLYYILDDGHGYETDRNYKVENSLELRALVERGICMSLSARTLDENWGAKCKCGSCDDGDGPIVAVKKHVKSGCTFKNCHAVAAFTLRREIGLDPGLEMSEDELAMAKRTSTMMKNAQDEGFRVVSSLQIQALESAAPIDGSTVLPVGCGATLSIPRPLFSAGGFPEWTNYVGGFVGALDYVWCSSEA----------FRPRNFAPLPPMSAVLQSTALPNAVFPSDHIPVVVDV 674
BLAST of EWM22199.1 vs. NCBI_GenBank
Match: gi|407425222|gb|EKF39341.1| (hypothetical protein MOQ_000436 [Trypanosoma cruzi marinkellei]) HSP 1 Score: 105.531 bits (262), Expect = 1.329e-21 Identity = 84/292 (28.77%), Postives = 122/292 (41.78%), Query Frame = 0
Query: 26 YPALRAILCEKLTTVGQIVLLR-LEEEEEDGQERLLLVGNTHLFYHPMAQHIRLMQMATLVREMTARQGEIEDKFGVRPRLVLCGDLNSTPTTATIRYLRGETIGPEDEVWEHLHVFGWGKRQGEGEEKEEGEAAATAAVLEAEEGKKGGEEGGDGKAVAVDVGRESRGRETLLSSRATPRVEAREEKEKEKNSKEKGSMASDGDVIPTLCLTRPFFSACGLPDFTNYVQGFVETLDYIFLESEAPVPLDPSGASFSVLSVGAMPTREEAGQDTALPSWQTPSDHVSILCDV 316
YP + L EK+T++G +VLL+ L +EE L+VGNTHLFYH A HIRL+Q+ TL+ ++ +P +VLCGD N TPTT R + E W+ +F WG + G EE E A EEG + E + + P + + + + G +P +TNY F E +DYIF S SVL +P E ++ ALP+ Q PSDH++++ D+
Sbjct: 379 YPEFKEAL-EKVTSIGALVLLKDLHTKEE------LIVGNTHLFYHANACHIRLLQVYTLLHKLKIFAAS-------QPSVVLCGDFNFTPTTGGYRLVTKGQTEAEHHSWKKGELFYWGCDRMLGLSTEEMEGVEETA-----------EEGASSSVPVTQPDKRQPPFEAFRETISAPL-------------QLRDAYSETGQELP----------------WTNYAMTFREVIDYIFF----------SPTRLSVLRTVPIPPESELSENVALPNKQYPSDHLALIADL 606
BLAST of EWM22199.1 vs. NCBI_GenBank
Match: gi|1072229860|gb|OEU14594.1| (Exo_endo_phos-domain-containing protein [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 103.99 bits (258), Expect = 5.429e-21 Identity = 86/321 (26.79%), Postives = 139/321 (43.30%), Query Frame = 0
Query: 22 LQDRYPALRAILCEKLTTVGQIVLLRLEEEEEDGQERLLLVGNTHLFYHPMAQHIRLMQMATLVREM----------TARQGEIEDKFGVRPRLVLCGDLNSTPTTATIRYLRGETIGPED-EVWEHLHVFGWGKRQGEGEEKEEGEAAATAAVLEAEEGKKGGEEGGDGKAVAVDVGRESRGRETLLSSRATPRVEAREEKEKEKNSKEKGSMASDGDVIPTLCLT-----RPFFSACG-----------LPDFTNYVQGFVETLDYIFLESEAPVPLDPSGASFSVLSVGAMPTREEAGQDTALPSWQTPSDHVSILCD 315
L + + LR ++ EKL V QI L+L+ + Q ++V NTHLFYHP+A HIR MQ+ +++++ + +E++ P + CGDLNS P + + + ++ + + W++L+ + W +G E+ A + E +E K + VG R ET+ + S+ ++ + T C T PF G +P FTNY GFV+TLDY+F S+A F MP+ ++ A+P+ PSDHVSI+CD
Sbjct: 726 LLESHNELRRVVIEKLGQVVQIATLKLKNPIKGQQPNFMIVANTHLFYHPLADHIRAMQVYVVLKKIDEVRRRRHHSCSNNSCLEEEEYSYP-FMFCGDLNSDPLSGASQLIYTRSLASDQYDCWKYLYKYQW---DWDGSHDED------AMITEHDESKYRNNDTA--------VGIIERNDETMRQDKII-------------------SIPTESKPLSTACTTGRSPLPPFIQLPGSFPILQSGCKEMPKFTNYAPGFVDTLDYVF-GSQAS---KNERFGFQPKRSAPMPSIKDVEPFFAMPNEVMPSDHVSIVCD 1005
BLAST of EWM22199.1 vs. NCBI_GenBank
Match: gi|588320623|emb|CCW60623.1| (unnamed protein product [Phytomonas sp. isolate EM1]) HSP 1 Score: 97.4413 bits (241), Expect = 8.182e-19 Identity = 80/296 (27.03%), Postives = 128/296 (43.24%), Query Frame = 0
Query: 35 EKLTTVGQIVLLRLEEEEEDGQERLLLVGNTHLFYHPMAQHIRLMQMATLVREMT------ARQGEIEDKFGVRPRLVLCGDLNSTPTTATIRYLRGETIGPEDEVWEHLHVFGWGKRQGEGEEKEEGEAAATAAVLEAEEGKKGGEEGGDGKAVAVDVGRESRGRETLLSSRATPRVEAREEKEKEKNSKEKGSMASDG--------DVIPTLCLTRPFFSACGLPDFTNYVQGFVETLDYIFLESEAPVPLDPSGASFSVLSVGAMPTREEAGQDTALPSWQTPSDHVSILCDV 316
+++T++G ++LLR E GQE +++G+THLFYH A HIR++Q L+ + ++ E+ + G R +VLCGD N T T R + + WE +F WG + G +EE A + A AVD G + + +V E+ +EK K S A+ D+ L L + +TNY F E +DY+F S+ S VL +P E ++ ALP+ + PSDH++++ D+
Sbjct: 614 QRVTSIGVVLLLR---EIATGQE--VVLGSTHLFYHANACHIRILQAYMLLHRLYQMATAGIKEAELAEGRGRRRSVVLCGDFNFTHCTGAYRLVTTGQVEATHHSWEKGRLFWWGCDRQLGCSEEELLAL-----------------NPNTPAAAVDAGDRTDAQS------GPEKVAPAEDNSQEKGEASKPSGAAKSPLEVFFKDDLHTPLALIDAYDRTDPAMQWTNYTLTFREVIDYVFFSSD----------SIDVLQTVPIPPEFELSENHALPNAKYPSDHLALIADL 871
BLAST of EWM22199.1 vs. NCBI_GenBank
Match: gi|554938412|gb|ESL08899.1| (hypothetical protein TRSC58_03390 [Trypanosoma rangeli SC58]) HSP 1 Score: 97.0561 bits (240), Expect = 1.122e-18 Identity = 97/325 (29.85%), Postives = 137/325 (42.15%), Query Frame = 0
Query: 6 FEMREAFDRKDNPFKPLQDR---------YPALRAILCEKLTTVGQIVLLR-LEEEEEDGQERLLLVGNTHLFYHPMAQHIRLMQMATLVREMTARQGEIEDKFGV-RPRLVLCGDLNSTPTTATIRYLRGETIGPEDEVWEHLHVFGWGKRQGEG---EEKEEGEAAATAAVLEAEEGKKGGEEGGDGKAVAVDVGRESRGRETLLSSRATPRVEAREEKEKEKNSKEKGSMASDGDVIPTLCLTRPFFSACGLPDFTNYVQGFVETLDYIFLESEAPVPLDPSGASFSVLSVGAMPTREEAGQDTALPSWQTPSDHVSILCDV 316
F M EA D N +D YP R L E +T++G +VLL+ L +EE LLVGNTHLFYH A HIRL+Q L++++ + F RP ++LCGD N T TT R L E W+ +F WG + EE E GE A++A E+ K TP +EA E K + K + + G+ + ++NY F E +DYIF AP L SVL +P E ++ ALP+ + PSDH++++ D+
Sbjct: 350 FCMDEALDFPLNWLTLQEDHPDLAARVSLYPEFREAL-EHVTSIGALVLLKDLHTQEE------LLVGNTHLFYHANACHIRLLQAYMLLQKL--------NNFAASRPCVLLCGDFNFTHTTGGYRLLTSGQAEAEHHSWKKGELFYWGCDRMLNVGTEETEVGEKVASSAAPATEQVK-----------------------------HQTP-LEAFRETLKAP-LQLKDAYSETGEKM----------------TWSNYTMTFREVIDYIFF---APTRL-------SVLRTVPIPPESELSENVALPNKRYPSDHLALIADL 602 The following BLAST results are available for this feature:
BLAST of EWM22199.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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