EWM22196.1, cds8473 (CDS) Nannochloropsis gaditana

Overview
NameEWM22196.1
Unique Namecds8473
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:112680..113010 -
Alignment locationKK037249.1:112526..112548 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22196.1
ProductTransferase
Orig transcript idgnl|cribi|Naga_100621g4.6225.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:112680..113010 -
KK037249.1supercontigKK037249.1:112526..112548 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0016747transferase activity, transferring acyl groups other than amino-acyl groups
Vocabulary: INTERPRO
TermDefinition
IPR023213CAT-like_dom
IPR003480Transferase
Homology
[Close]
BLAST of EWM22196.1 vs. NCBI_GenBank
Match: gi|585102635|gb|EWM22196.1| (Transferase [Nannochloropsis gaditana])

HSP 1 Score: 234.958 bits (598), Expect = 3.242e-78
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0 
Query:    1 MTVNIKVIKDSYVRPTTPPATSAGSSPPRVELAGVDVLFNRMNLRVVYFFPAPLSPHVLRSSLSKVLDKYPILGGRQRKEGKKTHYIELNGKGVLVRQQLATVKGGDKGKGGGGRDG 117
            MTVNIKVIKDSYVRPTTPPATSAGSSPPRVELAGVDVLFNRMNLRVVYFFPAPLSPHVLRSSLSKVLDKYPILGGRQRKEGKKTHYIELNGKGVLVRQQLATVKGGDKGKGGGGRDG
Sbjct:    1 MTVNIKVIKDSYVRPTTPPATSAGSSPPRVELAGVDVLFNRMNLRVVYFFPAPLSPHVLRSSLSKVLDKYPILGGRQRKEGKKTHYIELNGKGVLVRQQLATVKGGDKGKGGGGRDG 117
[Close]
BLAST of EWM22196.1 vs. NCBI_GenBank
Match: gi|553185088|ref|XP_005854199.1| (hypothetical protein NGA_0187100, partial [Nannochloropsis gaditana CCMP526] >gi|422294863|gb|EKU22163.1| hypothetical protein NGA_0187100, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 226.483 bits (576), Expect = 2.347e-74
Identity = 111/112 (99.11%), Postives = 111/112 (99.11%), Query Frame = 0 
Query:    1 MTVNIKVIKDSYVRPTTPPATSAGSSPPRVELAGVDVLFNRMNLRVVYFFPAPLSPHVLRSSLSKVLDKYPILGGRQRKEGKKTHYIELNGKGVLVRQQLATVKGGDKGKGG 112
            MTVNIKVIKDSYVRPTTPPATSAGSSPPRVELAGVDVLFNRMNLRVVYFFPAPLSPHVLRSSLSKVLDKYPILGGRQRKEGKKTHYIELNGKGVLVRQQLATVKGGDKGKG 
Sbjct:    1 MTVNIKVIKDSYVRPTTPPATSAGSSPPRVELAGVDVLFNRMNLRVVYFFPAPLSPHVLRSSLSKVLDKYPILGGRQRKEGKKTHYIELNGKGVLVRQQLATVKGGDKGKGA 112
[Close]
BLAST of EWM22196.1 vs. NCBI_GenBank
Match: gi|585106529|gb|EWM24902.1| (Transferase [Nannochloropsis gaditana])

HSP 1 Score: 67.0106 bits (162), Expect = 1.425e-10
Identity = 33/81 (40.74%), Postives = 50/81 (61.73%), Query Frame = 0 
Query:   32 LAGVDVLFNRMNLRVVYFFPAPLSPHVLRSSLSKVLDKYPILGGRQRKEGKKTHYIELNGKGVLVRQQLATVKGGDKGKGG 112
            LAG D +++   ++  +FF  PL+P +L+ SL+K LD YP+L GR R+   +  +I+  G GV V +Q+A V     GKGG
Sbjct:   35 LAGCDAIYDHFQVKAAFFFNEPLNPTLLKVSLAKALDAYPLLAGRARQGSNRDAWIDCCGSGVQVIEQIARV----TGKGG 111
The following BLAST results are available for this feature:
BLAST of EWM22196.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 3
Match NameE-valueIdentityDescription
gi|585102635|gb|EWM22196.1|3.242e-78100.00Transferase [Nannochloropsis gaditana][more]
gi|553185088|ref|XP_005854199.1|2.347e-7499.11hypothetical protein NGA_0187100, partial [Nannoch... [more]
gi|585106529|gb|EWM24902.1|1.425e-1040.74Transferase [Nannochloropsis gaditana][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8500rna8500Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications