EWM22203.1, cds8469 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22203.1 vs. NCBI_GenBank
Match: gi|585102647|gb|EWM22203.1| (glycerol-3-phosphate dehydrogenase [Nannochloropsis gaditana]) HSP 1 Score: 272.707 bits (696), Expect = 9.505e-93 Identity = 134/134 (100.00%), Postives = 134/134 (100.00%), Query Frame = 0 Query: 1 MNASAALVTRGVNEVQRLAINLGARSSTLTGLSGVGDTFGTCFGPLSRNRTLGMRLGRGETVEEILASMAEVAEGYATTFSLVEMIEKLPRAHRAERTFPIIYNVKCILDGSCTPQEGVRRLMDTKGRVELWNL 134 MNASAALVTRGVNEVQRLAINLGARSSTLTGLSGVGDTFGTCFGPLSRNRTLGMRLGRGETVEEILASMAEVAEGYATTFSLVEMIEKLPRAHRAERTFPIIYNVKCILDGSCTPQEGVRRLMDTKGRVELWNL Sbjct: 1 MNASAALVTRGVNEVQRLAINLGARSSTLTGLSGVGDTFGTCFGPLSRNRTLGMRLGRGETVEEILASMAEVAEGYATTFSLVEMIEKLPRAHRAERTFPIIYNVKCILDGSCTPQEGVRRLMDTKGRVELWNL 134
BLAST of EWM22203.1 vs. NCBI_GenBank
Match: gi|585105599|gb|EWM24210.1| (glycerol-3-phosphate dehydrogenase [Nannochloropsis gaditana]) HSP 1 Score: 188.348 bits (477), Expect = 1.347e-55 Identity = 95/133 (71.43%), Postives = 108/133 (81.20%), Query Frame = 0 Query: 2 NASAALVTRGVNEVQRLAINLGARSSTLTGLSGVGDTFGTCFGPLSRNRTLGMRLGRGETVEEILASMAEVAEGYATTFSLVEMIEKLPRAHRAERTFPIIYNVKCILDGSCTPQEGVRRLMDTKGRVELWNL 134 NA AALVTRG NE+QRLA++LGAR STLTGLSGVGDTFGTCFGPLSRNR LG+RLG+GE +E IL S EVAEG+AT FSLV++IEK RA+R E FPIIY VK IL+G TP EG+R LM RVE+WNL Sbjct: 297 NAMAALVTRGCNEMQRLALSLGARPSTLTGLSGVGDTFGTCFGPLSRNRNLGVRLGKGERLENILGSSTEVAEGHATAFSLVQLIEKTNRAYRRELEFPIIYGVKEILEGKRTPAEGLRDLMAMPVRVEMWNL 429
BLAST of EWM22203.1 vs. NCBI_GenBank
Match: gi|397582452|gb|EJK52292.1| (hypothetical protein THAOC_28450, partial [Thalassiosira oceanica]) HSP 1 Score: 149.058 bits (375), Expect = 1.459e-43 Identity = 74/132 (56.06%), Postives = 99/132 (75.00%), Query Frame = 0 Query: 2 NASAALVTRGVNEVQRLAINLGARSSTLTGLSGVGDTFGTCFGPLSRNRTLGMRLGRGETVEEILASMAEVAEGYATTFSLVEMIEKLPRAHRAERTFPIIYNVKCILDGSCTPQEGVRRLMDTKGRVELWN 133 NA + LVTRG E++RL I LGAR ST++GLSGVGDTFGTCFGPLSRNR G RLGRGET EEI ASM EVAEG T+ +LV+MI++ + +R + +PI++ V I++G+ P EG++ LM+ R+E ++ Sbjct: 16 NALSGLVTRGCGEMRRLGIYLGARPSTISGLSGVGDTFGTCFGPLSRNRQFGYRLGRGETAEEIRASMTEVAEGVDTSIALVKMIKERCKGYRLDLKYPILFGVAEIIEGNMKPLEGLKGLMNFPTRMENYD 147
BLAST of EWM22203.1 vs. NCBI_GenBank
Match: gi|1072236068|gb|OEU20796.1| (NAD-dependent glycerol-3-phosphate dehydrogenase [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 148.673 bits (374), Expect = 7.738e-41 Identity = 72/132 (54.55%), Postives = 97/132 (73.48%), Query Frame = 0 Query: 2 NASAALVTRGVNEVQRLAINLGARSSTLTGLSGVGDTFGTCFGPLSRNRTLGMRLGRGETVEEILASMAEVAEGYATTFSLVEMIEKLPRAHRAERTFPIIYNVKCILDGSCTPQEGVRRLMDTKGRVELWN 133 NA + LVTRG NE++RL + GAR ST+ GLSGVGDTFGTCFGPLSRNR G RLG+GET+EEILAS +EVAEG T ++V +IEK + +R + +PI++ + IL+G TP EG+ LM+ ++E ++ Sbjct: 219 NAMSGLVTRGCNEMRRLGLTFGARPSTIAGLSGVGDTFGTCFGPLSRNRKFGYRLGKGETMEEILASTSEVAEGVDTALAVVRLIEKECKGYRLDLKYPILFGIARILEGKSTPLEGLELLMNMPMQMENFD 350
BLAST of EWM22203.1 vs. NCBI_GenBank
Match: gi|551653989|ref|XP_005829771.1| (hypothetical protein GUITHDRAFT_73617 [Guillardia theta CCMP2712] >gi|428173892|gb|EKX42791.1| hypothetical protein GUITHDRAFT_73617 [Guillardia theta CCMP2712]) HSP 1 Score: 147.517 bits (371), Expect = 1.021e-40 Identity = 75/123 (60.98%), Postives = 94/123 (76.42%), Query Frame = 0 Query: 2 NASAALVTRGVNEVQRLAINLGARSSTLTGLSGVGDTFGTCFGPLSRNRTLGMRLGRGETVEEILASMAEVAEGYATTFSLVE-MIEKLPRAHRAERTFPIIYNVKCILDGSCTPQEGVRRLM 123 NA A LVTRG E+Q LA +GA STL GLSGVGDTFGTCFGPLSRNR LG+RLG+GE +E+IL+S EVAEGYAT SLVE ++ K+PR+ R + FPI++ V +L G +P+EG++ LM Sbjct: 220 NAVAGLVTRGCLEMQTLARAVGASPSTLMGLSGVGDTFGTCFGPLSRNRNLGIRLGQGEKLEDILSSSTEVAEGYATALSLVEFLLTKMPRSFRMDLKFPILFGVAEVLKGERSPREGMKDLM 342
BLAST of EWM22203.1 vs. NCBI_GenBank
Match: gi|397647202|gb|EJK77600.1| (hypothetical protein THAOC_00555 [Thalassiosira oceanica]) HSP 1 Score: 149.828 bits (377), Expect = 2.391e-40 Identity = 74/132 (56.06%), Postives = 99/132 (75.00%), Query Frame = 0 Query: 2 NASAALVTRGVNEVQRLAINLGARSSTLTGLSGVGDTFGTCFGPLSRNRTLGMRLGRGETVEEILASMAEVAEGYATTFSLVEMIEKLPRAHRAERTFPIIYNVKCILDGSCTPQEGVRRLMDTKGRVELWN 133 NA + LVTRG E++RL I LGAR ST++GLSGVGDTFGTCFGPLSRNR G RLGRGET EEI ASM EVAEG T+ +LV+MI++ + +R + +PI++ V I++G+ P EG++ LM+ R+E ++ Sbjct: 355 NALSGLVTRGCGEMRRLGIYLGARPSTISGLSGVGDTFGTCFGPLSRNRQFGYRLGRGETAEEIRASMTEVAEGVDTSIALVKMIKERCKGYRLDLKYPILFGVAEIIEGNMKPLEGLKGLMNFPTRMENYD 486
BLAST of EWM22203.1 vs. NCBI_GenBank
Match: gi|223994071|ref|XP_002286719.1| (predicted protein, partial [Thalassiosira pseudonana CCMP1335] >gi|220978034|gb|EED96360.1| predicted protein, partial [Thalassiosira pseudonana CCMP1335]) HSP 1 Score: 144.436 bits (363), Expect = 2.447e-39 Identity = 70/132 (53.03%), Postives = 97/132 (73.48%), Query Frame = 0 Query: 2 NASAALVTRGVNEVQRLAINLGARSSTLTGLSGVGDTFGTCFGPLSRNRTLGMRLGRGETVEEILASMAEVAEGYATTFSLVEMIEKLPRAHRAERTFPIIYNVKCILDGSCTPQEGVRRLMDTKGRVELWN 133 NA + LVTRG E++RL I LGAR ST++GLSGVGDTFGTCFGPLSRNR G RLG+GET EI SM EVAEG T+ +LV+MI++ + +R + +PI++ + I++G+ P EG++ LM+ R+E ++ Sbjct: 221 NAMSGLVTRGCGEMRRLGIYLGARPSTISGLSGVGDTFGTCFGPLSRNRRFGYRLGKGETAAEIRESMTEVAEGVDTSIALVKMIKERCKGYRLDLKYPILFGMADIIEGNMKPMEGMKALMNFPTRMENYD 352
BLAST of EWM22203.1 vs. NCBI_GenBank
Match: gi|219111117|ref|XP_002177310.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217411845|gb|EEC51773.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]) HSP 1 Score: 142.51 bits (358), Expect = 1.025e-38 Identity = 70/132 (53.03%), Postives = 95/132 (71.97%), Query Frame = 0 Query: 2 NASAALVTRGVNEVQRLAINLGARSSTLTGLSGVGDTFGTCFGPLSRNRTLGMRLGRGETVEEILASMAEVAEGYATTFSLVEMIEKLPRAHRAERTFPIIYNVKCILDGSCTPQEGVRRLMDTKGRVELWN 133 NA + LVTRG E++RL + GAR ST+ GLSGVGDTFGTCFGPLSRNR G RLG+GET+EEI AS EVAEG T +LV +I+ + +R + FPI++ V IL+G+ TP+EG+ +M+ ++E ++ Sbjct: 217 NAMSGLVTRGCGEMRRLGLTFGARPSTIAGLSGVGDTFGTCFGPLSRNRKFGYRLGKGETMEEIKASSTEVAEGVDTAIALVNLIKTECKGYRLDLKFPILFGVAAILEGNLTPREGLIGIMNMPFQMENFD 348
BLAST of EWM22203.1 vs. NCBI_GenBank
Match: gi|1210531531|dbj|GAX09887.1| (hypothetical protein FisN_11Lh132 [Fistulifera solaris]) HSP 1 Score: 143.665 bits (361), Expect = 1.117e-38 Identity = 70/132 (53.03%), Postives = 96/132 (72.73%), Query Frame = 0 Query: 2 NASAALVTRGVNEVQRLAINLGARSSTLTGLSGVGDTFGTCFGPLSRNRTLGMRLGRGETVEEILASMAEVAEGYATTFSLVEMIEKLPRAHRAERTFPIIYNVKCILDGSCTPQEGVRRLMDTKGRVELWN 133 NA + LVTRG E++RL + LGAR ST+ GLSGVGDTFGTCFGPLSRNR G RLG+GET+EEILAS +EVAEG T+ +LV I++ + +R + +PI++ V IL G TP +G++ +M+ +E ++ Sbjct: 263 NAMSGLVTRGCGEMRRLGLTLGARPSTIAGLSGVGDTFGTCFGPLSRNRQFGYRLGKGETMEEILASSSEVAEGVDTSIALVNFIKQNCKGYRLDLKYPILFGVADILQGKLTPLDGLKGIMNMPFLMENFD 394
BLAST of EWM22203.1 vs. NCBI_GenBank
Match: gi|1210526761|dbj|GAX14409.1| (hypothetical protein FisN_11Hh132 [Fistulifera solaris]) HSP 1 Score: 143.665 bits (361), Expect = 1.129e-38 Identity = 70/132 (53.03%), Postives = 96/132 (72.73%), Query Frame = 0 Query: 2 NASAALVTRGVNEVQRLAINLGARSSTLTGLSGVGDTFGTCFGPLSRNRTLGMRLGRGETVEEILASMAEVAEGYATTFSLVEMIEKLPRAHRAERTFPIIYNVKCILDGSCTPQEGVRRLMDTKGRVELWN 133 NA + LVTRG E++RL + LGAR ST+ GLSGVGDTFGTCFGPLSRNR G RLG+GET+EEILAS +EVAEG T+ +LV I++ + +R + +PI++ V IL G TP +G++ +M+ +E ++ Sbjct: 263 NAMSGLVTRGCGEMRRLGLTLGARPSTIAGLSGVGDTFGTCFGPLSRNRQFGYRLGKGETMEEILASSSEVAEGVDTSIALVNFIKQNCKGYRLDLKYPILFGVADILQGKLTPLDGLKGIMNMPFLMENFD 394 The following BLAST results are available for this feature:
BLAST of EWM22203.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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