EWM22205.1, cds8468 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM22205.1 vs. NCBI_GenBank
Match: gi|585102650|gb|EWM22205.1| (hypothetical protein Naga_100291g6 [Nannochloropsis gaditana]) HSP 1 Score: 568.926 bits (1465), Expect = 0.000e+0 Identity = 276/276 (100.00%), Postives = 276/276 (100.00%), Query Frame = 0
Query: 1 MQAASLYSSTVLLVILAVFMGCTVHAQEHDRSSRPFSRLQSTTGASSSSSSSVNSKQESSDKQTDDDFTKPSSRAGYLLNLTKNTFNPVQVFKDAMNTKGFKAILDNPDIQHRVLKDFPLLGALTGFSTIKDNRRLSAEETKNSFSTGMNTLLNLADDAFFNKVNEPDKVSATLAKMAASSDPGIQNLFKRARAGEQGAVEELQDEFVNQHYSGMDGKAFREISKQHNGDKFKQMPEMMHFIQKDASLAKAFEDLSRMRDSDFPPTEEEMMATVEL 276
MQAASLYSSTVLLVILAVFMGCTVHAQEHDRSSRPFSRLQSTTGASSSSSSSVNSKQESSDKQTDDDFTKPSSRAGYLLNLTKNTFNPVQVFKDAMNTKGFKAILDNPDIQHRVLKDFPLLGALTGFSTIKDNRRLSAEETKNSFSTGMNTLLNLADDAFFNKVNEPDKVSATLAKMAASSDPGIQNLFKRARAGEQGAVEELQDEFVNQHYSGMDGKAFREISKQHNGDKFKQMPEMMHFIQKDASLAKAFEDLSRMRDSDFPPTEEEMMATVEL
Sbjct: 1 MQAASLYSSTVLLVILAVFMGCTVHAQEHDRSSRPFSRLQSTTGASSSSSSSVNSKQESSDKQTDDDFTKPSSRAGYLLNLTKNTFNPVQVFKDAMNTKGFKAILDNPDIQHRVLKDFPLLGALTGFSTIKDNRRLSAEETKNSFSTGMNTLLNLADDAFFNKVNEPDKVSATLAKMAASSDPGIQNLFKRARAGEQGAVEELQDEFVNQHYSGMDGKAFREISKQHNGDKFKQMPEMMHFIQKDASLAKAFEDLSRMRDSDFPPTEEEMMATVEL 276
BLAST of EWM22205.1 vs. NCBI_GenBank
Match: gi|553185077|ref|XP_005854196.1| (hypothetical protein NGA_0186800 [Nannochloropsis gaditana CCMP526] >gi|422294860|gb|EKU22160.1| hypothetical protein NGA_0186800 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 546.199 bits (1406), Expect = 0.000e+0 Identity = 271/306 (88.56%), Postives = 274/306 (89.54%), Query Frame = 0
Query: 1 MQAASLYSSTVLLVILAVFMGCTVHAQEHDRSSRPFSRLQSTTGASSSSSSSVNSKQESSDKQTDDDFTKPSSRAGYLLNLTKNTFNPVQVFKDAMNTKGFKAILDNPDIQHRVLKDFPLLGALTGFSTIKDNRRLSAEE------------------------------TKNSFSTGMNTLLNLADDAFFNKVNEPDKVSATLAKMAASSDPGIQNLFKRARAGEQGAVEELQDEFVNQHYSGMDGKAFREISKQHNGDKFKQMPEMMHFIQKDASLAKAFEDLSRMRDSDFPPTEEEMMATVEL 276
MQA SLYSSTVLLV+LAVFMGCTVHAQEHDRSSRPFSRLQSTTGASSSSSSSV SKQESSDKQTDDDFTKPSSRAGYLLNLTKNTFNPVQVFKDAMNTKGFKAILDNPDIQHRVLKDFPLLGALTGFSTIKDNRRLSAEE TKNSFSTGMNTLLNLADDAFFNKVNEPDKVSATLAKMAASSDPGIQNLFKRARAGEQGAVEELQDEFVNQHYSGMDGKAFREI+KQHNGDKFKQMPEMMHFIQKDASLAKAFEDLSRMRDSDFPPTE+EMMATVEL
Sbjct: 1 MQAVSLYSSTVLLVVLAVFMGCTVHAQEHDRSSRPFSRLQSTTGASSSSSSSVTSKQESSDKQTDDDFTKPSSRAGYLLNLTKNTFNPVQVFKDAMNTKGFKAILDNPDIQHRVLKDFPLLGALTGFSTIKDNRRLSAEEVRWQIRGKRRRKREGNLIYGRGNDETLNAQTKNSFSTGMNTLLNLADDAFFNKVNEPDKVSATLAKMAASSDPGIQNLFKRARAGEQGAVEELQDEFVNQHYSGMDGKAFREITKQHNGDKFKQMPEMMHFIQKDASLAKAFEDLSRMRDSDFPPTEKEMMATVEL 306
BLAST of EWM22205.1 vs. NCBI_GenBank
Match: gi|585107197|gb|EWM25436.1| (hypothetical protein Naga_100005g87 [Nannochloropsis gaditana]) HSP 1 Score: 168.318 bits (425), Expect = 1.703e-46 Identity = 87/238 (36.55%), Postives = 137/238 (57.56%), Query Frame = 0
Query: 33 SRPFSRLQSTTG-ASSSSSSSVNSKQESSDKQTDDDFT------------------------KPSSRAGYLLNLTKNTFNPVQVFKDAMNTKGFKAILDNPDIQHRVLKDFPLLGALTGFSTIKDNRRLSAEETKNSFSTGMNTLLNLADDAFFNKVNEPDKVSATLAKMAASSDPGIQNLFKRARAGEQGAVEELQDEFVNQHYSGMDGKAFREISKQHNGDKFKQMPEMMHFIQKD 245
+RPF+RLQSTTG + ++ ++ +++T DD +P+ + +L + K +P+++F + +K F+A+L N +IQHR+LK+ PLL A GF I RRLSA ET F+ G+ +++ A AF KV +P + +AT+AKMAA +P IQ+LF+RA+ G+ AVEELQD F + H+ G+D + RE+ + H +K MPE+M FI ++
Sbjct: 56 ARPFTRLQSTTGNVVDTHGQQLDHNEQQRNQETLDDRNGKERQQAKRKRRLQQAASGFDQPLRPNDKVAFLQKIAKGNVDPLELFTRGVKSKAFQAVLKNVEIQHRILKEMPLLAAFDGFRQIT-GRRLSARETMEGFAIGVQNVIDFAKVAFI-KVKDPQQTAATIAKMAADPNPAIQSLFRRAQEGDPAAVEELQDVFNDLHFPGVDMRVLREVRRNHTFEKLLSMPEIMRFIDRN 291
BLAST of EWM22205.1 vs. NCBI_GenBank
Match: gi|585104564|gb|EWM23494.1| (hypothetical protein Naga_100198g11 [Nannochloropsis gaditana]) HSP 1 Score: 104.375 bits (259), Expect = 1.186e-22 Identity = 55/179 (30.73%), Postives = 105/179 (58.66%), Query Frame = 0
Query: 74 RAGYLLNLTKNTFNPVQVFKDAMNTKGFKAILDNPDIQHRVLKDFPLLGALTGFSTIKDNRRLSAEETKNSFSTGMNTLLNLADDAFFNKVNEPDKVSATLAKMAASSDPGIQNLFKRARAGEQGAVEELQDEFVNQHYSGMDGKAFREISKQHNGDKFKQMPEMMHFIQKDASLAKAF 252
++ + + K+ + V++F+ +K F++IL+N +IQHR+++ P+LGA++GF + RRL+ +ET FS G+ LL + + + +N P ++ +A+++ S DP IQ+LFK A ++ +V EL++ Y G+D + +++ DK +PEM FI +D +++ F
Sbjct: 131 KSAFFQKVKKDGIDSVELFETLFKSKAFESILENVEIQHRIIEGVPILGAVSGFREAR-GRRLTDQETTAGFSKGVRNLLEMFKTSAKHALN-PTLMNERIAELSKSDDPEIQDLFKGASENDEASVLELKNLAARDLYPGVDLEILQDVMNSLTFDKLLDIPEMARFIDQDPYISRVF 307
BLAST of EWM22205.1 vs. NCBI_GenBank
Match: gi|553183764|ref|XP_005853961.1| (hypothetical protein NGA_0461700 [Nannochloropsis gaditana CCMP526] >gi|422295096|gb|EKU22395.1| hypothetical protein NGA_0461700 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 68.1662 bits (165), Expect = 9.080e-10 Identity = 56/218 (25.69%), Postives = 98/218 (44.95%), Query Frame = 0
Query: 35 PFSRLQSTTGASSSSSSSVNSKQESSDKQTDDDFTKPSSRAGYLLNLTKNTFNPVQVFKDAMNTKGFKAILDNPDIQHRVLKDFPLLGALTGFSTIKDNRRLSAEETKNSFSTGMNTLLNLADDAFFNKVNEPDKVSATLAKMAASSDPGIQNLFKRARAGEQGAVEELQDEFVNQHYSGMDGKAFREISKQHNGDKFKQMPEMMHFIQKDASLAKAF 252
P R+QS TG S ++ V + KP + + KN + +++F+ + + G KAILD+ + QH+++++ PLL A GF I RRL T F+ G+N++L D + +P + L+++ A I F A AG+ GA++ + + + Y G++ + +S K E+M I D + A
Sbjct: 25 PMRRMQSLTGVLSGAAKDVMEDTLPA--------YKPDGELTMMQDTWKNGLDIMKLFETSFASPGMKAILDDVETQHKIMENLPLLAAFDGFKEIT-GRRLDDAGTTAGFTAGLNSILKTLPD-MLKTMKDPSISTRALSELLAEDANNISEAFAAASAGDGGAMDTVNEALNKKLYPGVNTDVLKTVSASDPLSKVTGNNEIMRLINDDPIVTAAL 232
BLAST of EWM22205.1 vs. NCBI_GenBank
Match: gi|585105441|gb|EWM24107.1| (hypothetical protein Naga_100286g4 [Nannochloropsis gaditana]) HSP 1 Score: 67.781 bits (164), Expect = 2.407e-9 Identity = 56/220 (25.45%), Postives = 100/220 (45.45%), Query Frame = 0
Query: 35 PFSRLQSTTGASSSSSSSVNSKQESSDKQTDDDFTKPSSRAGYLLNLTKNTFNPVQVFKDAMNTKGFKAILDNPDIQHRVLKDFPLLGALTGFSTIKDNRRLSAEETKNSFSTGMNTLLNLADDAFFNKVNEPDKVSATLAKMAASSDPGIQNLFKRARAGEQGAVEELQDEFVNQHYSGMDGKAFREISKQHNGDKFKQMPEMMHFIQKDASLAKAFED 254
P R+QS TG S ++ V + KP + + + KN + +++F+ + + G KAILD+ + QH+++++ PLL A GF I RRL T F+ G+N++L D + +P + L+++ A I F A AG+ GA++ + + + Y G++ + +S K E+M I D + A +
Sbjct: 25 PMRRMQSLTGVLSGAAKDVMEDTLPA--------YKPDAELTMMQDTWKNGLDIMKLFETSFASPGMKAILDDVETQHKIMENLPLLAAFDGFKEIT-GRRLDDAGTTAGFTAGLNSILKTLPD-MLKTMKDPSISTRALSELLAEDANNISEAFAAASAGDGGAMDTVNEALNKKLYPGVNTDVLKTVSASDPLSKVTGNNEIMRLINDDPIVTAALTE 234
BLAST of EWM22205.1 vs. NCBI_GenBank
Match: gi|553185360|ref|XP_005854240.1| (hypothetical protein NGA_0024302 [Nannochloropsis gaditana CCMP526] >gi|422294820|gb|EKU22120.1| hypothetical protein NGA_0024302 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 64.6994 bits (156), Expect = 4.043e-9 Identity = 28/83 (33.73%), Postives = 53/83 (63.86%), Query Frame = 0
Query: 73 SRAGYLLNLTKNTFNPVQVFKDAMNTKGFKAILDNPDIQHRVLKDFPLLGALTGFSTIKDNRRLSAEETKNSFSTGMNTLLNL 155
++ + + K+ + V++F+ +K F++IL+N +IQHR+++ P+LGA++GF + RRL+ +ET FS G+ LL +
Sbjct: 76 GKSAFFQKVKKDGIDSVELFETLFKSKAFESILENVEIQHRIIEGVPILGAVSGFREAR-GRRLTDQETTAGFSKGVRNLLEM 157 The following BLAST results are available for this feature:
BLAST of EWM22205.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 7
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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