EWM22207.1, cds8463 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22207.1 vs. NCBI_GenBank
Match: gi|585102652|gb|EWM22207.1| (abc transporter g family member 7 [Nannochloropsis gaditana]) HSP 1 Score: 593.964 bits (1530), Expect = 0.000e+0 Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 0
Query: 1 MEQKEDCNDWEQPLLKKETDVAAEMAGQQLALKPIKPVGLSWRGVSLSIPLKGKKNKGKTKEILHQVSGTAPAGRVTAIMGPTGSGKSSLLNALAGRVSFIKGATLEGELSVNGMPVEYGVVRRLCAYVVQDDVLYSFLTVQETLTLATHFYLPSALSEQEKATYVRDVINALGLAKARNTIIGDGQVRGVSGGERKRVSVGVELISNPSLLFLDEPTSGLDSFQAQSVMSAMGSLAQSGRTVVAAIHQPRSSIFDLLDMLVLVSEGRIIYAGSRRGLILRLPGMVLPPSVLPQ 294
MEQKEDCNDWEQPLLKKETDVAAEMAGQQLALKPIKPVGLSWRGVSLSIPLKGKKNKGKTKEILHQVSGTAPAGRVTAIMGPTGSGKSSLLNALAGRVSFIKGATLEGELSVNGMPVEYGVVRRLCAYVVQDDVLYSFLTVQETLTLATHFYLPSALSEQEKATYVRDVINALGLAKARNTIIGDGQVRGVSGGERKRVSVGVELISNPSLLFLDEPTSGLDSFQAQSVMSAMGSLAQSGRTVVAAIHQPRSSIFDLLDMLVLVSEGRIIYAGSRRGLILRLPGMVLPPSVLPQ
Sbjct: 1 MEQKEDCNDWEQPLLKKETDVAAEMAGQQLALKPIKPVGLSWRGVSLSIPLKGKKNKGKTKEILHQVSGTAPAGRVTAIMGPTGSGKSSLLNALAGRVSFIKGATLEGELSVNGMPVEYGVVRRLCAYVVQDDVLYSFLTVQETLTLATHFYLPSALSEQEKATYVRDVINALGLAKARNTIIGDGQVRGVSGGERKRVSVGVELISNPSLLFLDEPTSGLDSFQAQSVMSAMGSLAQSGRTVVAAIHQPRSSIFDLLDMLVLVSEGRIIYAGSRRGLILRLPGMVLPPSVLPQ 294
BLAST of EWM22207.1 vs. NCBI_GenBank
Match: gi|971515294|dbj|GAQ82936.1| (ABC transporter G family [Klebsormidium nitens]) HSP 1 Score: 266.929 bits (681), Expect = 5.073e-81 Identity = 147/271 (54.24%), Postives = 190/271 (70.11%), Query Frame = 0
Query: 7 CNDWEQPLLKKETDVAAEMAGQQLALKPIKPVGLSWRGVSLSIPLK---GKKNKGK-TKEILHQVSGTAPAGRVTAIMGPTGSGKSSLLNALAGRVSFIKGATLEGELSVNGMPVEYGVVRRLCAYVVQDDVLYSFLTVQETLTLATHFYLPSALSEQEKATYVRDVINALGLAKARNTIIGDGQVRGVSGGERKRVSVGVELISNPSLLFLDEPTSGLDSFQAQSVMSAMGSLAQSGRTVVAAIHQPRSSIFDLLDMLVLVSEGRIIYAG 273
+D E+ +K D ++ Q + V L WR ++ SI +K GK +GK TK IL +SGT AG AIMGPTGSGK+SLLNALAGR+ + TL+GE+ VNG P E +R+ AYV+QDDVLYS LTVQETLT A LPS +S Q+K V +++ LGL KARNTIIG+ RGVSGGERKR ++ VE++SNPS++FLDEPTSGLDSFQA +VMS++G+LA GRT+++ IHQPRSSI+ L + L+L+SEG +IY G
Sbjct: 34 AHDLEKGHSRKLKDATLSLSAQTVR------VSLEWRQLNYSIVVKKGKGKAEEGKVTKRILKNLSGTVRAGTFVAIMGPTGSGKTSLLNALAGRLQRV--GTLDGEILVNGKPRE-NTFKRITAYVMQDDVLYSSLTVQETLTTAALLRLPSKMSPQKKMERVDSIVSELGLGKARNTIIGNAFRRGVSGGERKRANIAVEMLSNPSMIFLDEPTSGLDSFQALNVMSSLGALADKGRTIISTIHQPRSSIYALFEDLLLLSEGEMIYFG 295
BLAST of EWM22207.1 vs. NCBI_GenBank
Match: gi|585113050|gb|EWM30390.1| (atp-binding cassette superfamily [Nannochloropsis gaditana]) HSP 1 Score: 254.218 bits (648), Expect = 3.176e-76 Identity = 129/239 (53.97%), Postives = 170/239 (71.13%), Query Frame = 0
Query: 35 IKPVGLSWRGVSLSIPLKGKKNKGKTKEILHQVSGTAPAGRVTAIMGPTGSGKSSLLNALAGRVSFIKGATLEGELSVNGMPVEYGVVRRLCAYVVQDDVLYSFLTVQETLTLATHFYLPSALSEQEKATYVRDVINALGLAKARNTIIGDGQVRGVSGGERKRVSVGVELISNPSLLFLDEPTSGLDSFQAQSVMSAMGSLAQSGRTVVAAIHQPRSSIFDLLDMLVLVSEGRIIYAG 273
+ V L W ++++ +K K +K++L SG A +G + AIMGP+GSGK+SLLNALAGR+ + K A+L G + NG P +R+ AYV QDDVLY+FLTV ET+ L+ +LP +S +EK V +I LGL KA+ TIIG+ + RGVSGGER+RV + VELIS PS++FLDEPTSGLDSFQAQSV+SA+ +LA+ GRT+V IHQPRSSIF + D L L+S+GR IY G
Sbjct: 30 FEKVDLQW--ININYTVKDGKKGCTSKKVLTWQSGRARSGEILAIMGPSGSGKTSLLNALAGRILYAKEASLSGLVLTNGQPRNGSDFKRISAYVTQDDVLYAFLTVWETIWLSAQLHLPPTISHEEKKREVDAIIQELGLVKAQQTIIGNERTRGVSGGERRRVMIAVELISGPSIIFLDEPTSGLDSFQAQSVVSALKTLAEEGRTIVTVIHQPRSSIFQMFDRLHLLSDGRTIYFG 266
BLAST of EWM22207.1 vs. NCBI_GenBank
Match: gi|1004145289|gb|KXZ53267.1| (hypothetical protein GPECTOR_7g1161 [Gonium pectorale]) HSP 1 Score: 254.218 bits (648), Expect = 6.262e-76 Identity = 131/246 (53.25%), Postives = 176/246 (71.54%), Query Frame = 0
Query: 28 QQLALKPIKPVGLSWRGVSLSIPLKGKKNKGKTKEILHQVSGTAPAGRVTAIMGPTGSGKSSLLNALAGRVSFIKGATLEGELSVNGMPVEYGVVRRLCAYVVQDDVLYSFLTVQETLTLATHFYLPSALSEQEKATYVRDVINALGLAKARNTIIGDGQVRGVSGGERKRVSVGVELISNPSLLFLDEPTSGLDSFQAQSVMSAMGSLAQSGRTVVAAIHQPRSSIFDLLDMLVLVSEGRIIYAG 273
Q LA ++PV LSW+ + ++ LK G TK IL VSG A GR+ +MGP+GSGK+SLL ALAGRV G L G L+VNG P R+ A+V Q+D+ YS L+VQETL+LA LP+A+S + ++ YV ++ LGLAKA T++GD + RG+SGGE+KR+S+G EL+ +PSL+F DEPT+GLDSFQA+ VM+ + SLA+SG TVVA+IHQPRSSIF + D LVL+SEG+ +Y+G
Sbjct: 60 QHLAADIVEPVTLSWQDLHCTLKLK----DGSTKPILQGVSGVARPGRLVGLMGPSGSGKTSLLTALAGRVPAGSGLALRGGLTVNGAPAAEAGHRQ--AFVAQEDLFYSMLSVQETLSLAAELRLPAAMSAEARSAYVSHLVAVLGLAKAMGTLVGDEKTRGLSGGEKKRLSIGCELVGSPSLVFADEPTTGLDSFQAEKVMATLASLARSGHTVVASIHQPRSSIFAMFDDLVLLSEGQPVYSG 299
BLAST of EWM22207.1 vs. NCBI_GenBank
Match: gi|585101850|gb|EWM21595.1| (abc transporter [Nannochloropsis gaditana]) HSP 1 Score: 261.536 bits (667), Expect = 9.024e-76 Identity = 139/252 (55.16%), Postives = 179/252 (71.03%), Query Frame = 0
Query: 22 AAEMAGQQLALKPIKPVGLSWRGVSLSIPLKGKKNKGKTKEILHQVSGTAPAGRVTAIMGPTGSGKSSLLNALAGRVSFIKGATLEGELSVNGMPVEYGVVRRLCAYVVQDDVLYSFLTVQETLTLATHFYLPSALSEQEKATYVRDVINALGLAKARNTIIGDGQVRGVSGGERKRVSVGVELISNPSLLFLDEPTSGLDSFQAQSVMSAMGSLAQSGRTVVAAIHQPRSSIFDLLDMLVLVSEGRIIYAG 273
A EMA + V +SW+ ++L + G + K +L+ VSG +G +TAIMGPTGSGKSSLL LAGRV+ KGATL G L NG+ + +++ +V QDD+L+ LTV+ETLTLA HF L S+ + +KA+ V VIN +GL K +TIIGD + RGVSGGERKRVS+GVELISNP++L LDEPTSGLD+ QA +VM+A+ LAQ+ RT+VA IHQPRSSIF +LD+LVL+SEGR IY G
Sbjct: 697 AGEMAN-------VAAVNVSWQNITLKV---GARKGHAPKIVLNDVSGEVRSGALTAIMGPTGSGKSSLLMVLAGRVAQTKGATLTGTLLTNGICRDAAAFKKIATFVTQDDLLFGHLTVKETLTLAAHFALGSSKNPAQKASLVTSVINDMGLGKTVHTIIGDERARGVSGGERKRVSIGVELISNPAVLLLDEPTSGLDAHQANAVMAALKKLAQAKRTIVAVIHQPRSSIFAMLDVLVLISEGRTIYLG 938 HSP 2 Score: 258.07 bits (658), Expect = 1.322e-74 Identity = 139/244 (56.97%), Postives = 173/244 (70.90%), Query Frame = 0
Query: 32 LKPIKPVGLSWRGVSLSIPLKGKKNKGKTKEILHQVSGTAPAGRVTAIMGPTGSGKSSLLNALAGRVSFIKGATLEGELSVNG-MPVEYGVVRRLCAYVVQDDVLYSFLTVQETLTLATHFYLPSAL-SEQEKATYVRDVINALGLAKARNTIIGDGQVRGVSGGERKRVSVGVELISNPSLLFLDEPTSGLDSFQAQSVMSAMGSLAQSGRTVVAAIHQPRSSIFDLLDMLVLVSEGRIIYAG 273
+ + P+ +SW VSL +P+KG K K K +L VSG AG ++AIMG +G GK+SLLN LAGRV +KG L+G L NG M VE R++ YV Q+D LY+ LTV ETL L F L +++ S Q YV VIN +GL K R+T IGD ++GVSGGERKRVS+ VELISNPS+LFLDEPT+GLDSFQA +VMS++ SLA + RT+V IHQPRSSIF +LD LVL+SEGR IYAG
Sbjct: 31 MASVDPINISWENVSLRVPVKGSKMK---KNVLANVSGRLQAGHISAIMGASGCGKTSLLNVLAGRVLAVKGGELDGRLLTNGKMRVENDF-RKVTGYVTQEDTLYACLTVYETLLLTAFFKLGNSMGSRQILEDYVSSVINDMGLKKCRDTAIGDEMIKGVSGGERKRVSIAVELISNPSVLFLDEPTTGLDSFQALAVMSSLKSLAGTQRTIVTVIHQPRSSIFAMLDRLVLLSEGRTIYAG 270
BLAST of EWM22207.1 vs. NCBI_GenBank
Match: gi|553179930|ref|XP_005852789.1| (white-brown-complex abc transporter family [Nannochloropsis gaditana CCMP526] >gi|422295745|gb|EKU23044.1| white-brown-complex abc transporter family [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 234.958 bits (598), Expect = 1.279e-74 Identity = 134/183 (73.22%), Postives = 140/183 (76.50%), Query Frame = 0
Query: 1 MEQKEDCNDWEQPLLKKETDVAAEMAGQQLALKPIKPVGLSWRGVSLSIPLKGKKNKGKTKEILHQVSGTAPAGRVTAIMGPTGSGKSSLLNALAGRVSFIKGATLEGELSVNGMPVEYGVVRRLCAYVVQDDVLYSFLTVQETLTLATHFYLPSALSEQEKATYVRDVINALGLAKARNTII 183
MEQKEDCNDWEQPLLKKETDVAAEMAGQQLALKPIKPVGLSWR VSLSIPLKGKKNKGKTKEILHQVSGTAPAGRVTAIMGPTG ++ + + QDDVLYSFLTVQETLTLATHFYLPSALSE+EKA+YVRDVINALGLAKARNTII
Sbjct: 1 MEQKEDCNDWEQPLLKKETDVAAEMAGQQLALKPIKPVGLSWREVSLSIPLKGKKNKGKTKEILHQVSGTAPAGRVTAIMGPTGV-----------------------HVAWSCASQPSFSSLLPSSLPFQDDVLYSFLTVQETLTLATHFYLPSALSEEEKASYVRDVINALGLAKARNTII 160
BLAST of EWM22207.1 vs. NCBI_GenBank
Match: gi|159471658|ref|XP_001693973.1| (predicted protein [Chlamydomonas reinhardtii] >gi|158277140|gb|EDP02909.1| predicted protein, partial [Chlamydomonas reinhardtii]) HSP 1 Score: 245.743 bits (626), Expect = 9.397e-73 Identity = 135/272 (49.63%), Postives = 182/272 (66.91%), Query Frame = 0
Query: 2 EQKEDCNDWEQPLLKKETDVAAEMAGQQLALKPIKPVGLSWRGVSLSIPLKGKKNKGKTKEILHQVSGTAPAGRVTAIMGPTGSGKSSLLNALAGRVSFIKGATLEGELSVNGMPVEYGVVRRLCAYVVQDDVLYSFLTVQETLTLATHFYLPSALSEQEKATYVRDVINALGLAKARNTIIGDGQVRGVSGGERKRVSVGVELISNPSLLFLDEPTSGLDSFQAQSVMSAMGSLAQSGRTVVAAIHQPRSSIFDLLDMLVLVSEGRIIYAG 273
+ K +D EQ L K V LA + ++PV LSW G++ ++ LK G TK+IL VSG A GR+ +MGP+GSGK+SLL ALAGRV +L G L VNGMP + R+ A+V Q+D+ YS L+V+ETL +A LP +S + + YV ++ LGLAKA +T +GD + RG+SGGE+KR+S+G EL+ +PSL+F DEPT+GLDSFQA+ VMS + LA SG TVVA+IHQPRSSIF + D LVL+SEG+ +Y+G
Sbjct: 40 QAKLHSSDSEQKLEAKFEKV--------LASEVVEPVELSWTGLNQTLKLK----DGSTKQILKGVSGVARPGRLVGLMGPSGSGKTSLLTALAGRVPAGSKMSLTGSLLVNGMPADEAGHRQ--AFVQQEDLFYSMLSVKETLQMAADLRLPQQMSAEAREAYVNQLVGVLGLAKAIDTCVGDEKTRGLSGGEKKRLSIGCELVGSPSLIFCDEPTTGLDSFQAEKVMSTLKGLAASGHTVVASIHQPRSSIFAMFDDLVLLSEGQPVYSG 297
BLAST of EWM22207.1 vs. NCBI_GenBank
Match: gi|302856008|ref|XP_002959452.1| (ATP-binding cassette transporter [Volvox carteri f. nagariensis] >gi|300255086|gb|EFJ39486.1| ATP-binding cassette transporter [Volvox carteri f. nagariensis]) HSP 1 Score: 238.81 bits (608), Expect = 7.192e-71 Identity = 131/260 (50.38%), Postives = 175/260 (67.31%), Query Frame = 0
Query: 15 LKKETDVAAEMAGQQL-ALKPIKPVGLSWRGVSLSIPLKGKKNKGKTKEILHQVSGTAPAGRVTAIMGPTGSGKSSLLNALAGRVSFIKGATLEGELSVNGMPVEYGVVRRLCAYVVQDDVLYSFLTVQETLTLATHFYLPSALSEQEKATYVRDVINALGLAKARNTIIGDGQVRGVSGGERKRVSVGVELISNPSLLFLDEPTSGLDSFQAQSVMSAMGSLAQSGRTVVAAIHQPRSSIFDLLDMLVLVSEGRIIYAG 273
LK E+ E ++L A I PV LSW + S+ LK G +K IL VSG A GR+ +MGP+GSGK+SLL ALAGRV L G L+VNG P R+ A+V Q+D+ +S LTV+ETL+LA LP +S +A YV + LGL+KA +T +GD + RG+SGGE+KR+S+G EL+ +PSL+F DEPT+GLDSFQA+ VM+ + SLA+SG TVVA++HQPRSSIF + D LVL+SEG+ +Y+G
Sbjct: 43 LKSESTAKLEAKYEELLAEDAIDPVTLSWTDLHCSLKLK----DGTSKPILRGVSGVARPGRLVGLMGPSGSGKTSLLTALAGRVPANSKMELTGSLTVNGRPAAEAGHRQ--AFVQQEDLFFSMLTVEETLSLAAELRLPREMSPDARAAYVAQLAGMLGLSKAGDTRVGDEKNRGLSGGEKKRLSIGCELVGSPSLIFCDEPTTGLDSFQAEKVMATLSSLARSGHTVVASVHQPRSSIFAMFDDLVLLSEGQPVYSG 296
BLAST of EWM22207.1 vs. NCBI_GenBank
Match: gi|545710619|ref|XP_005707617.1| (ABC transporter, ATP-binding protein isoform 1 [Galdieria sulphuraria] >gi|452824092|gb|EME31097.1| ABC transporter, ATP-binding protein isoform 1 [Galdieria sulphuraria]) HSP 1 Score: 232.261 bits (591), Expect = 4.692e-68 Identity = 116/223 (52.02%), Postives = 162/223 (72.65%), Query Frame = 0
Query: 52 KGKKN-KGKTKEILHQVSGTAPAGRVTAIMGPTGSGKSSLLNALAGRVSFIKGATLEGELSVNGMPVEYGVVRRLCAYVVQDDVLYSFLTVQETLTLATHFYLPSALSEQEKATYVRDVINALGLAKARNTIIGDGQVRGVSGGERKRVSVGVELISNPSLLFLDEPTSGLDSFQAQSVMSAMGSLAQSGRTVVAAIHQPRSSIFDLLDMLVLVSEGRIIYAG 273
KG N K KEIL VSG G++ AIMG +G+GK++LLN LAGR+S G + +NG E+ V +++ AYV+QDD +++ LTV+E +TL+ LPS++S ++K V+++I +GL+ +NT+IG RGVSGGERKRVS+ EL++NPSLLFLDEPTSGLD+F A++VM A+ LAQSGRTV+ IHQPRS IF++ DML+L+SEG+++Y G
Sbjct: 48 KGLFNRKSINKEILKGVSGIVKPGQLLAIMGASGAGKTTLLNVLAGRMSSSGNYFASGSVRLNGEKREFSVFKKISAYVMQDDNMFAELTVEEQVTLSCLLRLPSSMSIEKKKQRVQEIIQEMGLSHVKNTMIGSETKRGVSGGERKRVSIATELVTNPSLLFLDEPTSGLDAFNARNVMQALLKLAQSGRTVITTIHQPRSDIFNMFDMLMLLSEGKVMYFG 270
BLAST of EWM22207.1 vs. NCBI_GenBank
Match: gi|545368991|ref|XP_005649264.1| (hypothetical protein COCSUDRAFT_36047 [Coccomyxa subellipsoidea C-169] >gi|384251242|gb|EIE24720.1| hypothetical protein COCSUDRAFT_36047 [Coccomyxa subellipsoidea C-169]) HSP 1 Score: 232.646 bits (592), Expect = 5.661e-68 Identity = 125/251 (49.80%), Postives = 167/251 (66.53%), Query Frame = 0
Query: 38 VGLSWRGVSLSIPLKGKKNKGKTKEILHQVSGTAPAGRVTAIMGPTGSGKSSLLNALAGRVSFIKGATLEGELSVNGMPVEYGVVRRLCAYVVQDDVLYSFLTVQETLTLATHFYLPSALSEQEKATYVRDVINALGLAKARNTIIGDGQVRGVSGGERKRVSVGVELISNPSLLFLDEPTSGLDSFQAQSVMSAMGSLAQSGRTVVAAIHQPRSSIFDLLDMLVLVSEGRIIYAGSRRGLILRLPGMVLP 288
V L + V SI K G TK IL + G A GR+ AIMGP+G GK+SLLNALAG+V KG L+G ++VNG P R+ AYV Q+D+ YS LTV+ETL +A LP + +EK V D+I LGL ++ +T +GD + RG+SGGE+KR+S+G EL+ +P LLFLDEPT+GLDSFQA+ VM + LA G+TVV +IHQPRSSIF + D L+L+SEG+I+Y+G +G+I + P
Sbjct: 66 VDLRFTDVRCSITNK----TGVTKTILQNIGGEAKPGRLLAIMGPSGGGKTSLLNALAGQVPSTKGMELQGNITVNGAPQTDSNHRQ--AYVQQEDLFYSQLTVRETLNMAAALRLPKHMLAEEKEAAVADLIQRLGLVQSADTPVGDAKKRGLSGGEKKRLSIGSELLGSPMLLFLDEPTTGLDSFQAEKVMQTLKDLANEGKTVVCSIHQPRSSIFSMFDDLLLLSEGQIVYSGPAKGVISHFESLGYP 310 The following BLAST results are available for this feature:
BLAST of EWM22207.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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