EWM22232.1, cds8441 (CDS) Nannochloropsis gaditana

Overview
NameEWM22232.1
Unique Namecds8441
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037249.1:33644..33756 -
Alignment locationKK037249.1:33293..33517 -
Alignment locationKK037249.1:33080..33194 -
Alignment locationKK037249.1:32770..32868 -
Alignment locationKK037249.1:32528..32606 -
Alignment locationKK037249.1:32184..32296 -
Alignment locationKK037249.1:32024..32086 -
Alignment locationKK037249.1:31802..31905 -
Alignment locationKK037249.1:31526..31600 -
Alignment locationKK037249.1:31165..31348 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22232.1
ProductAnkyrin repeat-containing protein
Orig transcript idgnl|cribi|Naga_100254g4.5823.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037249.1supercontigKK037249.1:33644..33756 -
KK037249.1supercontigKK037249.1:33293..33517 -
KK037249.1supercontigKK037249.1:33080..33194 -
KK037249.1supercontigKK037249.1:32770..32868 -
KK037249.1supercontigKK037249.1:32528..32606 -
KK037249.1supercontigKK037249.1:32184..32296 -
KK037249.1supercontigKK037249.1:32024..32086 -
KK037249.1supercontigKK037249.1:31802..31905 -
KK037249.1supercontigKK037249.1:31526..31600 -
KK037249.1supercontigKK037249.1:31165..31348 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR020683Ankyrin_rpt-contain_dom
IPR002110Ankyrin_rpt
Homology
BLAST of EWM22232.1 vs. NCBI_GenBank
Match: gi|585102685|gb|EWM22232.1| (Ankyrin repeat-containing protein [Nannochloropsis gaditana])

HSP 1 Score: 782.711 bits (2020), Expect = 0.000e+0
Identity = 389/389 (100.00%), Postives = 389/389 (100.00%), Query Frame = 0
Query:    1 MGATELTEERPGKEAEGPPDDCTFKVDEDAAVAAKASRVSAAFHEAAKAGDNAALSTLLLAFNSSTDARSSLLIDARDPRTGHTALHVACKAGAPLTVKWLLEKGASILITDKGGYTPLDLARVKPSDENIRDCACRIQEYIQAHPPPYKKVGPLLGSFFEPPLERAWLDWACLHYGPSLLDLKGRDQRSPLHLAVSHKDAAFLEELLEMGADPFAKDTEGLSPLDLAMRSGHRESIRVLSRAMQMQLVAFLGLTLLFLLYRHGGDPQQAWTVLATLWPLGKTWQLLWTGSGLSAARRGAMGEWLSYWALIVPVFLLEGTLPAGLLGRRTPLERALRDLYMIVKIVGTLYLVYPGSRGARRLYGWLGRRQRGSRSQSERGGGAIKAKGE 389
            MGATELTEERPGKEAEGPPDDCTFKVDEDAAVAAKASRVSAAFHEAAKAGDNAALSTLLLAFNSSTDARSSLLIDARDPRTGHTALHVACKAGAPLTVKWLLEKGASILITDKGGYTPLDLARVKPSDENIRDCACRIQEYIQAHPPPYKKVGPLLGSFFEPPLERAWLDWACLHYGPSLLDLKGRDQRSPLHLAVSHKDAAFLEELLEMGADPFAKDTEGLSPLDLAMRSGHRESIRVLSRAMQMQLVAFLGLTLLFLLYRHGGDPQQAWTVLATLWPLGKTWQLLWTGSGLSAARRGAMGEWLSYWALIVPVFLLEGTLPAGLLGRRTPLERALRDLYMIVKIVGTLYLVYPGSRGARRLYGWLGRRQRGSRSQSERGGGAIKAKGE
Sbjct:    1 MGATELTEERPGKEAEGPPDDCTFKVDEDAAVAAKASRVSAAFHEAAKAGDNAALSTLLLAFNSSTDARSSLLIDARDPRTGHTALHVACKAGAPLTVKWLLEKGASILITDKGGYTPLDLARVKPSDENIRDCACRIQEYIQAHPPPYKKVGPLLGSFFEPPLERAWLDWACLHYGPSLLDLKGRDQRSPLHLAVSHKDAAFLEELLEMGADPFAKDTEGLSPLDLAMRSGHRESIRVLSRAMQMQLVAFLGLTLLFLLYRHGGDPQQAWTVLATLWPLGKTWQLLWTGSGLSAARRGAMGEWLSYWALIVPVFLLEGTLPAGLLGRRTPLERALRDLYMIVKIVGTLYLVYPGSRGARRLYGWLGRRQRGSRSQSERGGGAIKAKGE 389          
BLAST of EWM22232.1 vs. NCBI_GenBank
Match: gi|501938127|ref|WP_012675379.1| (ankyrin repeat-containing protein [Persephonella marina] >gi|225644954|gb|ACO03140.1| MHC_I C-terminus family protein [Persephonella marina EX-H1])

HSP 1 Score: 75.485 bits (184), Expect = 7.168e-12
Identity = 62/212 (29.25%), Postives = 100/212 (47.17%), Query Frame = 0
Query:   17 GPPDDCTFKVDEDAAVAAKASRVSAAFHEAAKAGDNAALSTLLLAFNSSTDARSSLLIDARDPRTGHTALHVACKAGAPLTVKWLLEKGASILITDKGGYTPLDLARVKPSDENIRDCACRIQEYIQAHPPPYKKVGPLLGSFFEPPLERAWLDWACLHYGPSLLDLKGRDQRSPLHLAVSHKDAAFLEELLEMGADPFAKDTEGLSPLDLA 228
            G  D     +D+ A V A+        H+A   G    L  + L  +   D      I+A++   G+T +H+A   G P  +K+L+EKGA +   DK G TPL LA ++  ++ ++     IQ     H    ++  PL  +     +  A +    + +G   ++++GR + +PLHLAV  K    +  L+E GAD  AKD    +PLD A
Sbjct:   53 GDVDKVKELLDKGADVNARDKSNYTPLHKAVSKG---KLEIVKLLIDRGAD------INAKESFFGYTPIHLAAIKGFPDILKYLIEKGADVNCRDKYGDTPLHLAALEGHEDIVK---ILIQNGADIHVKNNRRWTPLHKAALTGKVNVARI---LIEHGAD-VNVRGRSKETPLHLAVLRKQKKMVVFLIENGADVNAKDIRKRTPLDYA 248          
BLAST of EWM22232.1 vs. NCBI_GenBank
Match: gi|919002972|ref|XP_013415183.1| (PREDICTED: ankyrin-3-like [Lingula anatina])

HSP 1 Score: 72.0182 bits (175), Expect = 6.260e-10
Identity = 58/218 (26.61%), Postives = 106/218 (48.62%), Query Frame = 0
Query:   23 TFKVDEDAAVAAKASRVSAAFHEAAKAGDNAALSTLLLAFNSSTDARSSLLIDARDPRTGHTALHVACKAGAPLTVKWLLEKGASILITDKGGYTPLDLARVKPSDENIRDCACRIQEYIQAHPPPYKKVGPLLGSFFEPPLERAWLDWACLHYGPSLLDLKGRDQRSPLHLAVSHKDAAFLEELLEMGADPFAKDTEGLSPLDLAMRSGHRESIRVL 240
            +F ++  A V+    +   A H A+ +GD   L+ L +A  +  DA+S          TG T+L++A + G    +++L  K   + +  K GY+ L +A +   +++++     ++E   +     K    LL S      E++ +    + YG  + + K  DQ++PLH A+   D   LE LLE  ADP ++D  G +PL +A + G  +++  L
Sbjct:  530 SFLLENGAKVSGHDDKGFGALHLASASGD-ITLAKLFVAAGADVDAQS---------FTGITSLYLAAQNGQTDMIRFLHSKQTDMNVIGKNGYSALHIATIMGQEDSVK---TLLEEGADSDVCSAKGDTSLLLSVI---YEKSTITEILISYGADV-NCKDSDQKTPLHHAIERHDILMLELLLENDADPNSQDVAGWTPLHIASQLGDTDAVSAL 730          
BLAST of EWM22232.1 vs. NCBI_GenBank
Match: gi|919038901|ref|XP_013402944.1| (PREDICTED: ankyrin-3-like [Lingula anatina])

HSP 1 Score: 71.633 bits (174), Expect = 7.826e-10
Identity = 58/218 (26.61%), Postives = 105/218 (48.17%), Query Frame = 0
Query:   23 TFKVDEDAAVAAKASRVSAAFHEAAKAGDNAALSTLLLAFNSSTDARSSLLIDARDPRTGHTALHVACKAGAPLTVKWLLEKGASILITDKGGYTPLDLARVKPSDENIRDCACRIQEYIQAHPPPYKKVGPLLGSFFEPPLERAWLDWACLHYGPSLLDLKGRDQRSPLHLAVSHKDAAFLEELLEMGADPFAKDTEGLSPLDLAMRSGHRESIRVL 240
             F ++  A V+    +   A H A+ +GD   L+ L +A  +  DA+S          TG T+L++A + G    +++L  K   + +  K GY+ L +A +   +++++     ++E   +     K    LL S      E++ +    + YG  + + K  DQ++PLH A+   D   LE LLE  ADP ++D  G +PL +A + G  +++  L
Sbjct:  530 NFLLENGAKVSGHDDKGFGALHLASASGD-ITLAKLFVAAGADVDAQS---------FTGITSLYLAAQNGQTDMIRFLHSKQTDMNVIGKNGYSALHIATIMGQEDSVK---TLLEEGADSDVCSAKGDTSLLLSVI---YEKSTITEILISYGADV-NCKDSDQKTPLHHAIERHDILMLELLLENDADPNSQDVAGWTPLHIASQLGDTDAVSAL 730          
BLAST of EWM22232.1 vs. NCBI_GenBank
Match: gi|751478906|ref|XP_011195018.1| (PREDICTED: ankyrin-3 [Zeugodacus cucurbitae])

HSP 1 Score: 71.633 bits (174), Expect = 9.654e-10
Identity = 67/232 (28.88%), Postives = 105/232 (45.26%), Query Frame = 0
Query:   30 AAVAAKASRVSAAFHEAAKAGDNAALSTLLLAFNSSTDARSSLLIDARDPRTGHTALHVACKAGAPLTVKWLLEKGASILITDKGGYTPLDLARVKPSDENIRDCACRIQEYIQAHPPPYKKVGPL-LGSFFEPPLERAWLDWACLHYGPSLLDLKGRDQRSPLHLAVSHKDAAFLEELLEMGADPFAKDTEGLSPLDLAMRSGHRESIR-VLSRAMQMQLVAFLGLTLLFL 259
            A V A+A       H A++ G N  +  L+L   ++ DA +         +  +T LH+A K G    V+ L E  A +    K G+TPL LA     D+ +   A  +Q   +        V PL + + FE     + + +  L  G S L L  ++  S LH+A    +    ++LL+ GADP  +   G+SPL LA + GH + +  +L   +   + A  GLT L L
Sbjct:  529 AQVEARAREGQTPLHVASRLG-NIDIIMLMLQHGANVDAVT---------KDKYTPLHIAAKEGQEEVVQVLFENNAELDAVTKKGFTPLHLAAKYGKDKVV---ALLLQRGAKIDCQGKNDVTPLHVAAHFE----HSKVVFLLLERGASPL-LCAKNGHSALHIAAKKNEMEIAQQLLQHGADPDVRSKSGISPLHLAAQEGHVDMVHLLLEHGVSANVQAKNGLTPLHL 742          
BLAST of EWM22232.1 vs. NCBI_GenBank
Match: gi|228013288|gb|ACP49049.1| (Ankyrin [Sulfolobus islandicus Y.N.15.51])

HSP 1 Score: 69.707 bits (169), Expect = 1.627e-9
Identity = 61/214 (28.50%), Postives = 91/214 (42.52%), Query Frame = 0
Query:   82 GHTALHVACKAGAPLTVKWLLEKGASILITDKGGYTPL---------DLARV---KPSDENIRDCACRIQEYIQAHPPPYKKVGPLLGSFFEPPLERAWLDWACLHYGPSLLDLKGRDQRSPLHLAVSHKDAAFLEELLEMGADPFAKDTEGLSPLDLAMRSGHRESIRVL------------SRAMQMQLVAFLG-LTLLFLLYRHGGDPQQA 270
            G T LH+A + G    V+ LLE+GA     D  G TPL         D+ RV   + +D N +D   +   ++ A       V  LL    +P                   + K  + ++PLH+A    D   +  LLE GADP AKD  G +PL +A   GH + +RVL            +    + + A  G + ++ +L  HG DP+ A
Sbjct:  138 GLTPLHMAAQIGDVDVVRVLLERGADPNAKDNNGQTPLHMAAHKGDVDVVRVLLERGADPNAKDNNGQTPLHMAAQEGDVDVVRVLLERGADP-------------------NAKDNNGQTPLHMAAHKGDVDVVRVLLERGADPNAKDNNGQTPLHMAAHKGHVDVVRVLLERGADPNAKDNNGQTPLHMAAHKGHVDVVRVLLEHGADPRIA 332          
BLAST of EWM22232.1 vs. NCBI_GenBank
Match: gi|340386920|ref|XP_003391956.1| (PREDICTED: 26S proteasome non-ATPase regulatory subunit 10-like [Amphimedon queenslandica])

HSP 1 Score: 69.707 bits (169), Expect = 1.651e-9
Identity = 68/252 (26.98%), Postives = 104/252 (41.27%), Query Frame = 0
Query:   61 AFNSSTDARSSLLIDARDPRT----GHTALHVACKAGAPLTVKWLLEKGASILITDKGGYTPLDLARVKP------------SDENIRDCACRIQEYIQAHPPPYKKVGPLLGSFFEPPLERAWLDWACLHYGP---------SLL------DLKGRDQRSPLHLAVSHKDAAFLEELLEMGADPFAKDTEGLSPLDLAMRSGHRESIRVLSRA------------MQMQLVAFLGLT-LLFLLYRHGGDPQ 268
            A+N  T+A  +L+    DP      G T LH A   G    V+ L+E GA     D  G+TPL  A                +D N +D       +I AH    + VG L+ +  +P +++    W  LH            +L+      + K   + +P+H A        +E L+E GADP AKD +G +P+ +A ++GH E++  L  A              M   A+ G T ++  L   G DP 
Sbjct:   38 AWNGHTEAVEALVEAGADPNAKDDDGWTPLHAAAWNGHTEAVEALVEAGADPNAKDDDGWTPLHAAAWNGHTEAVGALVEAGADPNAKDDDGWAPVHIAAHNGHTEAVGALVDAGADPNVKKD-DGWTSLHAAAQEGHTEAVGALVEAGADPNAKKDGEWAPMHAAAQEGHTEAVEVLVEAGADPNAKDDDGWTPVHIAAQNGHTEAVGALVEAGADPNAKNDGEWTPMHAAAWNGHTDVVEALVEAGADPS 288          
BLAST of EWM22232.1 vs. NCBI_GenBank
Match: gi|584036643|ref|XP_006765609.1| (PREDICTED: ankyrin-1 isoform X13 [Myotis davidii])

HSP 1 Score: 70.4774 bits (171), Expect = 2.041e-9
Identity = 75/249 (30.12%), Postives = 105/249 (42.17%), Query Frame = 0
Query:   24 FKVDEDAAVAAKASRVSAAFHEAAKAGDNAALSTLLLAFNSSTDARSSLLIDARDPRTGHTALHVACKAGAPLTVKWLLEKGASILITDKGGYTPLDLARVKPSDENIRDCACRIQEYI---QAHPPPYKKVG--PLLGSFFEPPLE--RAWLDWACLHYGPSLLDLKGRDQRSPLHLAVSHKDAAFLEELLEMGADPFAKDTEGLSPLDLAMRSGHRESIR-VLSRAMQMQLVAFLGLTLLFLLYRHG 264
            + +   A V AKA       H AA+ G    +  LL        A  +L   A     GHT LH+A + G   T   LLEK AS     K G+TPL +A         +    R+ E +    AHP    K G  PL  +     L+  +  L      + P+L      +  +PLH+A           LL+ GA P A+  +G++PL LA + GH E +  +LSR     L    GLT L L+ + G
Sbjct:  487 YLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLL-----ENSANPNLTTTA-----GHTPLHIAAREGHVDTALALLEKEASQACMTKKGFTPLHVA--------AKYGKARVAEVLLERDAHPNAAGKYGLTPLHMAVHHNHLDIVKLLLPRGGSPHSPAL------NGYTPLHIAAKQNQMEVARNLLQYGASPNAESVQGVTPLHLAAQDGHAEMVALLLSRQANGNLGNKSGLTPLHLVAQEG 711          
BLAST of EWM22232.1 vs. NCBI_GenBank
Match: gi|987949588|ref|XP_015420681.1| (PREDICTED: ankyrin-1 isoform X5 [Myotis davidii])

HSP 1 Score: 70.4774 bits (171), Expect = 2.125e-9
Identity = 75/249 (30.12%), Postives = 105/249 (42.17%), Query Frame = 0
Query:   24 FKVDEDAAVAAKASRVSAAFHEAAKAGDNAALSTLLLAFNSSTDARSSLLIDARDPRTGHTALHVACKAGAPLTVKWLLEKGASILITDKGGYTPLDLARVKPSDENIRDCACRIQEYI---QAHPPPYKKVG--PLLGSFFEPPLE--RAWLDWACLHYGPSLLDLKGRDQRSPLHLAVSHKDAAFLEELLEMGADPFAKDTEGLSPLDLAMRSGHRESIR-VLSRAMQMQLVAFLGLTLLFLLYRHG 264
            + +   A V AKA       H AA+ G    +  LL        A  +L   A     GHT LH+A + G   T   LLEK AS     K G+TPL +A         +    R+ E +    AHP    K G  PL  +     L+  +  L      + P+L      +  +PLH+A           LL+ GA P A+  +G++PL LA + GH E +  +LSR     L    GLT L L+ + G
Sbjct:  459 YLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLL-----ENSANPNLTTTA-----GHTPLHIAAREGHVDTALALLEKEASQACMTKKGFTPLHVA--------AKYGKARVAEVLLERDAHPNAAGKYGLTPLHMAVHHNHLDIVKLLLPRGGSPHSPAL------NGYTPLHIAAKQNQMEVARNLLQYGASPNAESVQGVTPLHLAAQDGHAEMVALLLSRQANGNLGNKSGLTPLHLVAQEG 683          
BLAST of EWM22232.1 vs. NCBI_GenBank
Match: gi|344281353|ref|XP_003412444.1| (PREDICTED: ankyrin-1 [Loxodonta africana])

HSP 1 Score: 70.4774 bits (171), Expect = 2.183e-9
Identity = 73/249 (29.32%), Postives = 108/249 (43.37%), Query Frame = 0
Query:   24 FKVDEDAAVAAKASRVSAAFHEAAKAGDNAALSTLLLAFNSSTDARSSLLIDARDPRTGHTALHVACKAGAPLTVKWLLEKGASILITDKGGYTPLDLARVKPSDENIRDCACRIQEYIQAHPPPYKKVG--PLLGSFFEPPLE--RAWLDWACLHYGPSLLDLKGRDQRSPLHLAVSHKDAAFLEELLEMGADPFAKDTEGLSPLDLAMRSGHRESIR-VLSRAMQMQLVAFLGLTLLFLLYRHGGDP 267
            + +   A V  KA       H AA+ G +A +  LLL  N++ +  ++          GHT LH+A + G   TV  LLEK AS     K G+TPL +A         +    R+ E +  HP    K G  PL  +     L+  +  L      + P+L      +  +PLH+A           LL+ GA   A+  +G++PL LA + GH E +  +LS+     L    GLT L L  + G  P
Sbjct:  422 YLLQNKAKVNGKAKDDQTPLHCAARVG-HANMVKLLLDNNANPNLATT---------AGHTPLHIAAREGHVETVLTLLEKRASQACMTKKGFTPLHVA--------AKYGKVRVAELLLEHPNAAGKNGLTPLHLAVHHNNLDIVKLLLPRGSSPHSPAL------NGYTPLHIAAKQNQMEVACSLLQYGASANAESLQGVTPLHLAAQEGHTEMVELLLSKQANSNLGNKSGLTPLHLAAQEGHVP 646          
The following BLAST results are available for this feature:
BLAST of EWM22232.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102685|gb|EWM22232.1|0.000e+0100.00Ankyrin repeat-containing protein [Nannochloropsis... [more]
gi|501938127|ref|WP_012675379.1|7.168e-1229.25ankyrin repeat-containing protein [Persephonella m... [more]
gi|919002972|ref|XP_013415183.1|6.260e-1026.61PREDICTED: ankyrin-3-like [Lingula anatina][more]
gi|919038901|ref|XP_013402944.1|7.826e-1026.61PREDICTED: ankyrin-3-like [Lingula anatina][more]
gi|751478906|ref|XP_011195018.1|9.654e-1028.88PREDICTED: ankyrin-3 [Zeugodacus cucurbitae][more]
gi|228013288|gb|ACP49049.1|1.627e-928.50Ankyrin [Sulfolobus islandicus Y.N.15.51][more]
gi|340386920|ref|XP_003391956.1|1.651e-926.98PREDICTED: 26S proteasome non-ATPase regulatory su... [more]
gi|584036643|ref|XP_006765609.1|2.041e-930.12PREDICTED: ankyrin-1 isoform X13 [Myotis davidii][more]
gi|987949588|ref|XP_015420681.1|2.125e-930.12PREDICTED: ankyrin-1 isoform X5 [Myotis davidii][more]
gi|344281353|ref|XP_003412444.1|2.183e-929.32PREDICTED: ankyrin-1 [Loxodonta africana][more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8468rna8468Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications