EWM22255.1, cds8424 (CDS) Nannochloropsis gaditana

Overview
NameEWM22255.1
Unique Namecds8424
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:705458..705576 -
Alignment locationKK037248.1:705095..705395 -
Alignment locationKK037248.1:704553..704949 -
Alignment locationKK037248.1:704036..704445 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22255.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100195g9.691.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:705458..705576 -
KK037248.1supercontigKK037248.1:705095..705395 -
KK037248.1supercontigKK037248.1:704553..704949 -
KK037248.1supercontigKK037248.1:704036..704445 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM22255.1 vs. NCBI_GenBank
Match: gi|585102713|gb|EWM22255.1| (hypothetical protein Naga_100195g9 [Nannochloropsis gaditana])

HSP 1 Score: 827.395 bits (2136), Expect = 0.000e+0
Identity = 408/408 (100.00%), Postives = 408/408 (100.00%), Query Frame = 0
Query:    1 MRGTFLVPSPIKLSINPSSIVLRMAGVACSTIPLFILTLRVDGEVAWKESHDAYVRRARSFICPLSSCKLPSLDSLVCTARTGGSATCAMVILAPFWSSYGASAKLVLLPLRPCSWIQSGGSHVRSVASMTNGSIGVSGKKQSVQDLFEALSWKRLDRKTLVDRARLMVAEKELELVKAVEETKRVLAEKESELVKAVEETKRVLAEKESELIKARAENKVELVTAHADARVLRVEARAIKAELENATFRLKAKNLEVLRLLGHSVNLRRAIESFQEEEVLPRLCLKPRGRVTVGMWERFMQAKPDIRRRVERQTPWRKSKIAAEMGHIYTTLSGRIHSSHQIGDAAVVIGTDVLTTEECLGVGALLYDFVPIEFHPPELMEKFERNEEEGTAEDVQDKAGKGEGERQ 408
            MRGTFLVPSPIKLSINPSSIVLRMAGVACSTIPLFILTLRVDGEVAWKESHDAYVRRARSFICPLSSCKLPSLDSLVCTARTGGSATCAMVILAPFWSSYGASAKLVLLPLRPCSWIQSGGSHVRSVASMTNGSIGVSGKKQSVQDLFEALSWKRLDRKTLVDRARLMVAEKELELVKAVEETKRVLAEKESELVKAVEETKRVLAEKESELIKARAENKVELVTAHADARVLRVEARAIKAELENATFRLKAKNLEVLRLLGHSVNLRRAIESFQEEEVLPRLCLKPRGRVTVGMWERFMQAKPDIRRRVERQTPWRKSKIAAEMGHIYTTLSGRIHSSHQIGDAAVVIGTDVLTTEECLGVGALLYDFVPIEFHPPELMEKFERNEEEGTAEDVQDKAGKGEGERQ
Sbjct:    1 MRGTFLVPSPIKLSINPSSIVLRMAGVACSTIPLFILTLRVDGEVAWKESHDAYVRRARSFICPLSSCKLPSLDSLVCTARTGGSATCAMVILAPFWSSYGASAKLVLLPLRPCSWIQSGGSHVRSVASMTNGSIGVSGKKQSVQDLFEALSWKRLDRKTLVDRARLMVAEKELELVKAVEETKRVLAEKESELVKAVEETKRVLAEKESELIKARAENKVELVTAHADARVLRVEARAIKAELENATFRLKAKNLEVLRLLGHSVNLRRAIESFQEEEVLPRLCLKPRGRVTVGMWERFMQAKPDIRRRVERQTPWRKSKIAAEMGHIYTTLSGRIHSSHQIGDAAVVIGTDVLTTEECLGVGALLYDFVPIEFHPPELMEKFERNEEEGTAEDVQDKAGKGEGERQ 408          
BLAST of EWM22255.1 vs. NCBI_GenBank
Match: gi|585099822|gb|EWM20323.1| (hypothetical protein Naga_100406g4 [Nannochloropsis gaditana])

HSP 1 Score: 516.153 bits (1328), Expect = 0.000e+0
Identity = 269/344 (78.20%), Postives = 287/344 (83.43%), Query Frame = 0
Query:   90 MVILAPFWSSYGASAKLVLLPLRPCSWIQSGGSHVRSVASMTNGSIGVSGKKQSVQDLFEALSWKRLDRKTLVDRARLMVAEKELELVKAVEETKRVLAEKES-----------ELVKAVEETKRVLAEKESELIKARAENKVELVTAHADARVL--------------RVEARAIKAELENATFRLKAKNLEVLRLLGHSVNLRRAIESFQEEEVLPRLCLKPRGRVTVGMWERFMQAKPDIRRRVERQTPWRKSKIAAEMGHIYTTLSGRIHSSHQIGDAAVVIGTDVLTTEECLGVGALLYDFVPIEFHPPELMEKFERNEEEGTAEDVQDKAGKGEGERQ 408
            MVI   F SS GASA+LVLLPLRP  WI+S GSHVRSVAS TNGS+  SGK QSV DLFEALSWKRLDRKTLVDRARL+VAEKELE+VKAVEE KRVLAEKE            E VKAVEE KRVLAEKE E+ KARAEN++E+V A A+ARVL              R EARA KAELE AT  LKAKNLE+LRL GHSVNLRRAIE+FQEEEVLPRL LKP  RVTVGMWERFMQA+PD+RRRVERQTPWRKSK+AAEMGHIYTTLSGRIHSSHQ+GDAAVVIG DVLTTEECLGVGALLYDFVPIEFHPPELMEKFE+NE EGTAEDV+DKAGKGEGERQ
Sbjct:    1 MVISVSFLSSSGASARLVLLPLRPSPWIRSRGSHVRSVASRTNGSMEASGKTQSVVDLFEALSWKRLDRKTLVDRARLVVAEKELEVVKAVEEKKRVLAEKELASVKAVEEKQLEFVKAVEEKKRVLAEKEMEVFKARAENEMEVVKAQAEARVLQADARNAWGEARVLRAEARATKAELETATGHLKAKNLEILRL-GHSVNLRRAIEAFQEEEVLPRLGLKPTSRVTVGMWERFMQARPDMRRRVERQTPWRKSKVAAEMGHIYTTLSGRIHSSHQVGDAAVVIGMDVLTTEECLGVGALLYDFVPIEFHPPELMEKFEKNEREGTAEDVEDKAGKGEGERQ 343          
BLAST of EWM22255.1 vs. NCBI_GenBank
Match: gi|553183470|ref|XP_005853903.1| (hypothetical protein NGA_0463600 [Nannochloropsis gaditana CCMP526] >gi|422295158|gb|EKU22457.1| hypothetical protein NGA_0463600 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 442.965 bits (1138), Expect = 5.251e-154
Identity = 219/223 (98.21%), Postives = 222/223 (99.55%), Query Frame = 0
Query:  186 VLAEKESELVKAVEETKRVLAEKESELIKARAENKVELVTAHADARVLRVEARAIKAELENATFRLKAKNLEVLRLLGHSVNLRRAIESFQEEEVLPRLCLKPRGRVTVGMWERFMQAKPDIRRRVERQTPWRKSKIAAEMGHIYTTLSGRIHSSHQIGDAAVVIGTDVLTTEECLGVGALLYDFVPIEFHPPELMEKFERNEEEGTAEDVQDKAGKGEGERQ 408
            ++AE+E ELVKAVEETKRVLAEKESELIKARAENKVELVTAHADARVLRVEARAIKAELENATFRLKAKNLEVLRLLGHSVNLRRAIESFQEEEVLPRLCLKPRGRVTVGMWERFMQAKPDIRRRVERQTPWRKSKIAAEMGHIYTTLSGRIHSSHQIGDAAVVIGTDVLTTEECLGVGALLYDFVPIEFHPPELMEKFERNEEEGTAEDVQDKAGKGEGERQ
Sbjct:    1 MVAEEELELVKAVEETKRVLAEKESELIKARAENKVELVTAHADARVLRVEARAIKAELENATFRLKAKNLEVLRLLGHSVNLRRAIESFQEEEVLPRLCLKPRGRVTVGMWERFMQAKPDIRRRVERQTPWRKSKIAAEMGHIYTTLSGRIHSSHQIGDAAVVIGTDVLTTEECLGVGALLYDFVPIEFHPPELMEKFERNEEEGTAEDVQDKAGKGEGERQ 223          
BLAST of EWM22255.1 vs. NCBI_GenBank
Match: gi|553176124|ref|XP_005852354.1| (hypothetical protein NGA_0729600, partial [Nannochloropsis gaditana CCMP526] >gi|422296174|gb|EKU23473.1| hypothetical protein NGA_0729600, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 416.387 bits (1069), Expect = 3.733e-143
Identity = 225/289 (77.85%), Postives = 229/289 (79.24%), Query Frame = 0
Query:  134 SIGVSGKKQSVQDLFEALSWKRLDRKTLVDRARLMVAEKELELVKAVEETKRVLAEKESELVKAVEETKRVLAEKESELIKARAENKVELVTAH--------------ADARVLRVEARAIKAELENATFRLKAKNLEVLRLLGHSVNLRRAIESFQEEEVLPRLCLKPRGRVTVGMWERFMQAKPDIRRRVERQTPWRKSKIAAEMGHIYTTLSGRIHSSHQIGDAAVVIGTDVLTTEECLGVGALLYDFVPIEFHPPELMEKFERNEEEGTAEDVQDKAGKGEGERQ 408
            SIGVSGKKQSVQDLFEALSWKRLDRKTLVDRARLMVAEKELELV                                    KARA+N+VE+V AH              ADARVLRVEARA K ELENAT RLKAKNLEVLR LGHSVNLRRAIESFQEEEVLP L LKP  RVTVGMWERFMQAKPDIRRRVERQTPWRKSK+AAEMGHIYTTLSGRIHSSHQIGDAAVVIGTDVLTTEECLGVGALLYDFVPIEFHPPELMEKFERNEEEGTAEDVQDKAG GEGERQ
Sbjct:    1 SIGVSGKKQSVQDLFEALSWKRLDRKTLVDRARLMVAEKELELV------------------------------------KARAKNEVEVVKAHADARDAWADARDAWADARVLRVEARATKVELENATLRLKAKNLEVLR-LGHSVNLRRAIESFQEEEVLPLLGLKPTSRVTVGMWERFMQAKPDIRRRVERQTPWRKSKVAAEMGHIYTTLSGRIHSSHQIGDAAVVIGTDVLTTEECLGVGALLYDFVPIEFHPPELMEKFERNEEEGTAEDVQDKAGNGEGERQ 252          
BLAST of EWM22255.1 vs. NCBI_GenBank
Match: gi|585099823|gb|EWM20324.1| (hypothetical protein Naga_100406g7 [Nannochloropsis gaditana])

HSP 1 Score: 358.607 bits (919), Expect = 1.600e-118
Identity = 212/367 (57.77%), Postives = 237/367 (64.58%), Query Frame = 0
Query:   33 PLF--ILTLRVDGEVAWKESHDAYVRRARSFICPLSSCKLPSLDSLVCTARTGGSATCAMVILAPF-WSS-YGASAKLVLLP---LRPCSWIQSGGSHVRSVASMTNGSIGVSGKKQSVQDLFEALSWKRLDRKTLVDRARLMVAEKELELVKAVEETKRVLAEKESELVKAVEETKRVLAEKESELIKARAENKVELVTAHADARVLRVEARAIKAELENATFRLKAKNLEVLRLLGHSVNLRRAIESFQEEEVLPRLCLKPRGRVTVGMWERFMQAKPDIRRRVERQTPWRKSKIAAEMGHIYTTLSGRIHSSHQIGDAAVVIGTDVLTTEECLGVGALLYDFVPIEFHPPELMEKFERNEEEGT 392
            PLF    T+RVD       + D  +  +      +  C   S  SL  T  +   AT    I+    WS  Y +  +LVLLP      C  +      VR+ A +  G +       SV DLFEALSWKRLDR+TLVDRARL+VAEKELE+VKA                                    RAEN+VE+V A A+ARVL  EARA KAELE A   LKAKNLE+LR L HSVNLRRAIESFQEEEVLPRL LKP  RVTVGMWERFMQA+PDIRR VERQTPWRKSK+AAEMGHIYTTL GRIHSSHQIGDAAVVIGTD+LTTEECLGVGALLYDFVPIEFHPPELMEKFE+NE E +
Sbjct:    9 PLFASYQTVRVDARYVPHSTSDQAIDPS------IKHCPPRSWSSLYHTFSSNSHATQGQAIVQLVRWSFLYHSCRRLVLLPGWSCFRCDRVLGSDPGVRTSAVLPVGQMAALRLPGSVVDLFEALSWKRLDRRTLVDRARLVVAEKELEVVKA------------------------------------RAENEVEVVKAQAEARVLWAEARATKAELETAAGHLKAKNLEILR-LRHSVNLRRAIESFQEEEVLPRLGLKPTSRVTVGMWERFMQARPDIRRHVERQTPWRKSKVAAEMGHIYTTLPGRIHSSHQIGDAAVVIGTDLLTTEECLGVGALLYDFVPIEFHPPELMEKFEKNEREDS 332          
BLAST of EWM22255.1 vs. NCBI_GenBank
Match: gi|553176247|ref|XP_005852364.1| (hypothetical protein NGA_0725500 [Nannochloropsis gaditana CCMP526] >gi|422296165|gb|EKU23464.1| hypothetical protein NGA_0725500 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 338.191 bits (866), Expect = 5.091e-113
Identity = 167/201 (83.08%), Postives = 181/201 (90.05%), Query Frame = 0
Query:  211 ELIKARAENKV---ELVTAHADARVLRVEARAIKAELENATFRLKAKNLEVLRLLGHSVNLRRAIESFQEEEVLPRLCLKPRGRVTVGMWERFMQAKPDIRRRVERQTPWRKSKIAAEMGHIYTTLSGRIHSSHQIGDAAVVIGTDVLTTEECLGVGALLYDFVPIEFHPPELMEKFERNEEEGTAEDVQDKAGKGEGERQ 408
            E++KA+AE +V   +   A  +ARVLR EARA KAELE AT  LKAKNLE+LRL GHSVNLRRAIE+FQEEEVLPRL LKP  RVTVGMWERFMQA+PD+RRRVERQTPWRKSK+AAEMGHIYTTLSGRIHSSHQ+GDAAVVIG DVLTTEECLGVGALLYDFVPIEFHPPELMEKFE+NE EGTAEDV+DKAGKGEGERQ
Sbjct:    2 EVVKAQAEARVLQADARNAWGEARVLRAEARATKAELETATGHLKAKNLEILRL-GHSVNLRRAIEAFQEEEVLPRLGLKPTSRVTVGMWERFMQARPDMRRRVERQTPWRKSKVAAEMGHIYTTLSGRIHSSHQVGDAAVVIGMDVLTTEECLGVGALLYDFVPIEFHPPELMEKFEKNEREGTAEDVEDKAGKGEGERQ 201          
BLAST of EWM22255.1 vs. NCBI_GenBank
Match: gi|585099537|gb|EWM20148.1| (hypothetical protein Naga_101505g2 [Nannochloropsis gaditana])

HSP 1 Score: 222.631 bits (566), Expect = 1.700e-67
Identity = 132/187 (70.59%), Postives = 138/187 (73.80%), Query Frame = 0
Query:   93 LAPFWSSYGASAKLVLLPLRPCSWIQSGGSHVRSVASMTNGSIGVSGKKQSVQDLFEALSWKRLDRKTLVDRARLMVAEKELELVKAVEETKRVLAEKESELVKAVEETKRVLAEKESELIKARAENKVELV-------TAHADARVLRVEARAIKAELENATFRLKAKNLEVLRLLGHSVNLRRAI 272
            +A FWSS+GASAKLVLLPLRPCSWIQSGGSHVRS+ASMTNG+IGVSGKKQSVQDLFEALSWKRLDRKTLVDRARLMVAEKELELV                                    KARAEN+VE+V        A ADARVLRVEARA KAELENAT RLKAKNLEVLR LGHSVNLRRAI
Sbjct:   41 MASFWSSFGASAKLVLLPLRPCSWIQSGGSHVRSLASMTNGNIGVSGKKQSVQDLFEALSWKRLDRKTLVDRARLMVAEKELELV------------------------------------KARAENEVEVVKAHADARDAWADARVLRVEARATKAELENATLRLKAKNLEVLR-LGHSVNLRRAI 190          
BLAST of EWM22255.1 vs. NCBI_GenBank
Match: gi|585099633|gb|EWM20206.1| (hypothetical protein Naga_100946g1 [Nannochloropsis gaditana])

HSP 1 Score: 162.925 bits (411), Expect = 6.742e-46
Identity = 79/85 (92.94%), Postives = 81/85 (95.29%), Query Frame = 0
Query:  324 AEMGHIYTTLSGRIHSSHQIGDAAVVIGTDVLTTEECLGVGALLYDFVPIEFHPPELMEKFERNEEEGTAEDVQDKAGKGEGERQ 408
            A  G I +TLSGRIHSSHQIGDAAVVIGTDVLTTEECLGVGALLYDFVPIEFHPPELMEKFERNE+EGTAEDVQDKAGKGEGERQ
Sbjct:   28 ARKGQI-STLSGRIHSSHQIGDAAVVIGTDVLTTEECLGVGALLYDFVPIEFHPPELMEKFERNEQEGTAEDVQDKAGKGEGERQ 111          
BLAST of EWM22255.1 vs. NCBI_GenBank
Match: gi|553176856|ref|XP_005852410.1| (hypothetical protein NGA_0709800, partial [Nannochloropsis gaditana CCMP526] >gi|422296123|gb|EKU23422.1| hypothetical protein NGA_0709800, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 119.013 bits (297), Expect = 6.204e-28
Identity = 79/144 (54.86%), Postives = 86/144 (59.72%), Query Frame = 0
Query:  142 QSVQDLFEALSWKRLDRKTLVDRARLMVAEKELELVKAVEETKRVLAEKESELVKAVEETKRVLAEKESELIKARAENKVELVTAHADARVLRVEARAIKAELENATFRLKAKNLEVLRLLGHSVNLRRAIESFQEEEVLPRLC 285
            QSV DLFEALSWKRLDR+TLVDRARL+VAEKELE+VKA                                    RAEN+VE+V A A+ARVL  EARA KAELE A   LKAKNLE+LRL  HSVNLRRAI    E     R C
Sbjct:    2 QSVVDLFEALSWKRLDRRTLVDRARLVVAEKELEVVKA------------------------------------RAENEVEVVKAQAEARVLWAEARATKAELETAAGHLKAKNLEILRLR-HSVNLRRAIGKCIEGIARGRAC 108          
The following BLAST results are available for this feature:
BLAST of EWM22255.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 9
Match NameE-valueIdentityDescription
gi|585102713|gb|EWM22255.1|0.000e+0100.00hypothetical protein Naga_100195g9 [Nannochloropsi... [more]
gi|585099822|gb|EWM20323.1|0.000e+078.20hypothetical protein Naga_100406g4 [Nannochloropsi... [more]
gi|553183470|ref|XP_005853903.1|5.251e-15498.21hypothetical protein NGA_0463600 [Nannochloropsis ... [more]
gi|553176124|ref|XP_005852354.1|3.733e-14377.85hypothetical protein NGA_0729600, partial [Nannoch... [more]
gi|585099823|gb|EWM20324.1|1.600e-11857.77hypothetical protein Naga_100406g7 [Nannochloropsi... [more]
gi|553176247|ref|XP_005852364.1|5.091e-11383.08hypothetical protein NGA_0725500 [Nannochloropsis ... [more]
gi|585099537|gb|EWM20148.1|1.700e-6770.59hypothetical protein Naga_101505g2 [Nannochloropsi... [more]
gi|585099633|gb|EWM20206.1|6.742e-4692.94hypothetical protein Naga_100946g1 [Nannochloropsi... [more]
gi|553176856|ref|XP_005852410.1|6.204e-2854.86hypothetical protein NGA_0709800, partial [Nannoch... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8451rna8451Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications