EWM22255.1, cds8424 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
Homology
BLAST of EWM22255.1 vs. NCBI_GenBank
Match: gi|585102713|gb|EWM22255.1| (hypothetical protein Naga_100195g9 [Nannochloropsis gaditana]) HSP 1 Score: 827.395 bits (2136), Expect = 0.000e+0 Identity = 408/408 (100.00%), Postives = 408/408 (100.00%), Query Frame = 0
Query: 1 MRGTFLVPSPIKLSINPSSIVLRMAGVACSTIPLFILTLRVDGEVAWKESHDAYVRRARSFICPLSSCKLPSLDSLVCTARTGGSATCAMVILAPFWSSYGASAKLVLLPLRPCSWIQSGGSHVRSVASMTNGSIGVSGKKQSVQDLFEALSWKRLDRKTLVDRARLMVAEKELELVKAVEETKRVLAEKESELVKAVEETKRVLAEKESELIKARAENKVELVTAHADARVLRVEARAIKAELENATFRLKAKNLEVLRLLGHSVNLRRAIESFQEEEVLPRLCLKPRGRVTVGMWERFMQAKPDIRRRVERQTPWRKSKIAAEMGHIYTTLSGRIHSSHQIGDAAVVIGTDVLTTEECLGVGALLYDFVPIEFHPPELMEKFERNEEEGTAEDVQDKAGKGEGERQ 408
MRGTFLVPSPIKLSINPSSIVLRMAGVACSTIPLFILTLRVDGEVAWKESHDAYVRRARSFICPLSSCKLPSLDSLVCTARTGGSATCAMVILAPFWSSYGASAKLVLLPLRPCSWIQSGGSHVRSVASMTNGSIGVSGKKQSVQDLFEALSWKRLDRKTLVDRARLMVAEKELELVKAVEETKRVLAEKESELVKAVEETKRVLAEKESELIKARAENKVELVTAHADARVLRVEARAIKAELENATFRLKAKNLEVLRLLGHSVNLRRAIESFQEEEVLPRLCLKPRGRVTVGMWERFMQAKPDIRRRVERQTPWRKSKIAAEMGHIYTTLSGRIHSSHQIGDAAVVIGTDVLTTEECLGVGALLYDFVPIEFHPPELMEKFERNEEEGTAEDVQDKAGKGEGERQ
Sbjct: 1 MRGTFLVPSPIKLSINPSSIVLRMAGVACSTIPLFILTLRVDGEVAWKESHDAYVRRARSFICPLSSCKLPSLDSLVCTARTGGSATCAMVILAPFWSSYGASAKLVLLPLRPCSWIQSGGSHVRSVASMTNGSIGVSGKKQSVQDLFEALSWKRLDRKTLVDRARLMVAEKELELVKAVEETKRVLAEKESELVKAVEETKRVLAEKESELIKARAENKVELVTAHADARVLRVEARAIKAELENATFRLKAKNLEVLRLLGHSVNLRRAIESFQEEEVLPRLCLKPRGRVTVGMWERFMQAKPDIRRRVERQTPWRKSKIAAEMGHIYTTLSGRIHSSHQIGDAAVVIGTDVLTTEECLGVGALLYDFVPIEFHPPELMEKFERNEEEGTAEDVQDKAGKGEGERQ 408
BLAST of EWM22255.1 vs. NCBI_GenBank
Match: gi|585099822|gb|EWM20323.1| (hypothetical protein Naga_100406g4 [Nannochloropsis gaditana]) HSP 1 Score: 516.153 bits (1328), Expect = 0.000e+0 Identity = 269/344 (78.20%), Postives = 287/344 (83.43%), Query Frame = 0
Query: 90 MVILAPFWSSYGASAKLVLLPLRPCSWIQSGGSHVRSVASMTNGSIGVSGKKQSVQDLFEALSWKRLDRKTLVDRARLMVAEKELELVKAVEETKRVLAEKES-----------ELVKAVEETKRVLAEKESELIKARAENKVELVTAHADARVL--------------RVEARAIKAELENATFRLKAKNLEVLRLLGHSVNLRRAIESFQEEEVLPRLCLKPRGRVTVGMWERFMQAKPDIRRRVERQTPWRKSKIAAEMGHIYTTLSGRIHSSHQIGDAAVVIGTDVLTTEECLGVGALLYDFVPIEFHPPELMEKFERNEEEGTAEDVQDKAGKGEGERQ 408
MVI F SS GASA+LVLLPLRP WI+S GSHVRSVAS TNGS+ SGK QSV DLFEALSWKRLDRKTLVDRARL+VAEKELE+VKAVEE KRVLAEKE E VKAVEE KRVLAEKE E+ KARAEN++E+V A A+ARVL R EARA KAELE AT LKAKNLE+LRL GHSVNLRRAIE+FQEEEVLPRL LKP RVTVGMWERFMQA+PD+RRRVERQTPWRKSK+AAEMGHIYTTLSGRIHSSHQ+GDAAVVIG DVLTTEECLGVGALLYDFVPIEFHPPELMEKFE+NE EGTAEDV+DKAGKGEGERQ
Sbjct: 1 MVISVSFLSSSGASARLVLLPLRPSPWIRSRGSHVRSVASRTNGSMEASGKTQSVVDLFEALSWKRLDRKTLVDRARLVVAEKELEVVKAVEEKKRVLAEKELASVKAVEEKQLEFVKAVEEKKRVLAEKEMEVFKARAENEMEVVKAQAEARVLQADARNAWGEARVLRAEARATKAELETATGHLKAKNLEILRL-GHSVNLRRAIEAFQEEEVLPRLGLKPTSRVTVGMWERFMQARPDMRRRVERQTPWRKSKVAAEMGHIYTTLSGRIHSSHQVGDAAVVIGMDVLTTEECLGVGALLYDFVPIEFHPPELMEKFEKNEREGTAEDVEDKAGKGEGERQ 343
BLAST of EWM22255.1 vs. NCBI_GenBank
Match: gi|553183470|ref|XP_005853903.1| (hypothetical protein NGA_0463600 [Nannochloropsis gaditana CCMP526] >gi|422295158|gb|EKU22457.1| hypothetical protein NGA_0463600 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 442.965 bits (1138), Expect = 5.251e-154 Identity = 219/223 (98.21%), Postives = 222/223 (99.55%), Query Frame = 0
Query: 186 VLAEKESELVKAVEETKRVLAEKESELIKARAENKVELVTAHADARVLRVEARAIKAELENATFRLKAKNLEVLRLLGHSVNLRRAIESFQEEEVLPRLCLKPRGRVTVGMWERFMQAKPDIRRRVERQTPWRKSKIAAEMGHIYTTLSGRIHSSHQIGDAAVVIGTDVLTTEECLGVGALLYDFVPIEFHPPELMEKFERNEEEGTAEDVQDKAGKGEGERQ 408
++AE+E ELVKAVEETKRVLAEKESELIKARAENKVELVTAHADARVLRVEARAIKAELENATFRLKAKNLEVLRLLGHSVNLRRAIESFQEEEVLPRLCLKPRGRVTVGMWERFMQAKPDIRRRVERQTPWRKSKIAAEMGHIYTTLSGRIHSSHQIGDAAVVIGTDVLTTEECLGVGALLYDFVPIEFHPPELMEKFERNEEEGTAEDVQDKAGKGEGERQ
Sbjct: 1 MVAEEELELVKAVEETKRVLAEKESELIKARAENKVELVTAHADARVLRVEARAIKAELENATFRLKAKNLEVLRLLGHSVNLRRAIESFQEEEVLPRLCLKPRGRVTVGMWERFMQAKPDIRRRVERQTPWRKSKIAAEMGHIYTTLSGRIHSSHQIGDAAVVIGTDVLTTEECLGVGALLYDFVPIEFHPPELMEKFERNEEEGTAEDVQDKAGKGEGERQ 223
BLAST of EWM22255.1 vs. NCBI_GenBank
Match: gi|553176124|ref|XP_005852354.1| (hypothetical protein NGA_0729600, partial [Nannochloropsis gaditana CCMP526] >gi|422296174|gb|EKU23473.1| hypothetical protein NGA_0729600, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 416.387 bits (1069), Expect = 3.733e-143 Identity = 225/289 (77.85%), Postives = 229/289 (79.24%), Query Frame = 0
Query: 134 SIGVSGKKQSVQDLFEALSWKRLDRKTLVDRARLMVAEKELELVKAVEETKRVLAEKESELVKAVEETKRVLAEKESELIKARAENKVELVTAH--------------ADARVLRVEARAIKAELENATFRLKAKNLEVLRLLGHSVNLRRAIESFQEEEVLPRLCLKPRGRVTVGMWERFMQAKPDIRRRVERQTPWRKSKIAAEMGHIYTTLSGRIHSSHQIGDAAVVIGTDVLTTEECLGVGALLYDFVPIEFHPPELMEKFERNEEEGTAEDVQDKAGKGEGERQ 408
SIGVSGKKQSVQDLFEALSWKRLDRKTLVDRARLMVAEKELELV KARA+N+VE+V AH ADARVLRVEARA K ELENAT RLKAKNLEVLR LGHSVNLRRAIESFQEEEVLP L LKP RVTVGMWERFMQAKPDIRRRVERQTPWRKSK+AAEMGHIYTTLSGRIHSSHQIGDAAVVIGTDVLTTEECLGVGALLYDFVPIEFHPPELMEKFERNEEEGTAEDVQDKAG GEGERQ
Sbjct: 1 SIGVSGKKQSVQDLFEALSWKRLDRKTLVDRARLMVAEKELELV------------------------------------KARAKNEVEVVKAHADARDAWADARDAWADARVLRVEARATKVELENATLRLKAKNLEVLR-LGHSVNLRRAIESFQEEEVLPLLGLKPTSRVTVGMWERFMQAKPDIRRRVERQTPWRKSKVAAEMGHIYTTLSGRIHSSHQIGDAAVVIGTDVLTTEECLGVGALLYDFVPIEFHPPELMEKFERNEEEGTAEDVQDKAGNGEGERQ 252
BLAST of EWM22255.1 vs. NCBI_GenBank
Match: gi|585099823|gb|EWM20324.1| (hypothetical protein Naga_100406g7 [Nannochloropsis gaditana]) HSP 1 Score: 358.607 bits (919), Expect = 1.600e-118 Identity = 212/367 (57.77%), Postives = 237/367 (64.58%), Query Frame = 0
Query: 33 PLF--ILTLRVDGEVAWKESHDAYVRRARSFICPLSSCKLPSLDSLVCTARTGGSATCAMVILAPF-WSS-YGASAKLVLLP---LRPCSWIQSGGSHVRSVASMTNGSIGVSGKKQSVQDLFEALSWKRLDRKTLVDRARLMVAEKELELVKAVEETKRVLAEKESELVKAVEETKRVLAEKESELIKARAENKVELVTAHADARVLRVEARAIKAELENATFRLKAKNLEVLRLLGHSVNLRRAIESFQEEEVLPRLCLKPRGRVTVGMWERFMQAKPDIRRRVERQTPWRKSKIAAEMGHIYTTLSGRIHSSHQIGDAAVVIGTDVLTTEECLGVGALLYDFVPIEFHPPELMEKFERNEEEGT 392
PLF T+RVD + D + + + C S SL T + AT I+ WS Y + +LVLLP C + VR+ A + G + SV DLFEALSWKRLDR+TLVDRARL+VAEKELE+VKA RAEN+VE+V A A+ARVL EARA KAELE A LKAKNLE+LR L HSVNLRRAIESFQEEEVLPRL LKP RVTVGMWERFMQA+PDIRR VERQTPWRKSK+AAEMGHIYTTL GRIHSSHQIGDAAVVIGTD+LTTEECLGVGALLYDFVPIEFHPPELMEKFE+NE E +
Sbjct: 9 PLFASYQTVRVDARYVPHSTSDQAIDPS------IKHCPPRSWSSLYHTFSSNSHATQGQAIVQLVRWSFLYHSCRRLVLLPGWSCFRCDRVLGSDPGVRTSAVLPVGQMAALRLPGSVVDLFEALSWKRLDRRTLVDRARLVVAEKELEVVKA------------------------------------RAENEVEVVKAQAEARVLWAEARATKAELETAAGHLKAKNLEILR-LRHSVNLRRAIESFQEEEVLPRLGLKPTSRVTVGMWERFMQARPDIRRHVERQTPWRKSKVAAEMGHIYTTLPGRIHSSHQIGDAAVVIGTDLLTTEECLGVGALLYDFVPIEFHPPELMEKFEKNEREDS 332
BLAST of EWM22255.1 vs. NCBI_GenBank
Match: gi|553176247|ref|XP_005852364.1| (hypothetical protein NGA_0725500 [Nannochloropsis gaditana CCMP526] >gi|422296165|gb|EKU23464.1| hypothetical protein NGA_0725500 [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 338.191 bits (866), Expect = 5.091e-113 Identity = 167/201 (83.08%), Postives = 181/201 (90.05%), Query Frame = 0
Query: 211 ELIKARAENKV---ELVTAHADARVLRVEARAIKAELENATFRLKAKNLEVLRLLGHSVNLRRAIESFQEEEVLPRLCLKPRGRVTVGMWERFMQAKPDIRRRVERQTPWRKSKIAAEMGHIYTTLSGRIHSSHQIGDAAVVIGTDVLTTEECLGVGALLYDFVPIEFHPPELMEKFERNEEEGTAEDVQDKAGKGEGERQ 408
E++KA+AE +V + A +ARVLR EARA KAELE AT LKAKNLE+LRL GHSVNLRRAIE+FQEEEVLPRL LKP RVTVGMWERFMQA+PD+RRRVERQTPWRKSK+AAEMGHIYTTLSGRIHSSHQ+GDAAVVIG DVLTTEECLGVGALLYDFVPIEFHPPELMEKFE+NE EGTAEDV+DKAGKGEGERQ
Sbjct: 2 EVVKAQAEARVLQADARNAWGEARVLRAEARATKAELETATGHLKAKNLEILRL-GHSVNLRRAIEAFQEEEVLPRLGLKPTSRVTVGMWERFMQARPDMRRRVERQTPWRKSKVAAEMGHIYTTLSGRIHSSHQVGDAAVVIGMDVLTTEECLGVGALLYDFVPIEFHPPELMEKFEKNEREGTAEDVEDKAGKGEGERQ 201
BLAST of EWM22255.1 vs. NCBI_GenBank
Match: gi|585099537|gb|EWM20148.1| (hypothetical protein Naga_101505g2 [Nannochloropsis gaditana]) HSP 1 Score: 222.631 bits (566), Expect = 1.700e-67 Identity = 132/187 (70.59%), Postives = 138/187 (73.80%), Query Frame = 0
Query: 93 LAPFWSSYGASAKLVLLPLRPCSWIQSGGSHVRSVASMTNGSIGVSGKKQSVQDLFEALSWKRLDRKTLVDRARLMVAEKELELVKAVEETKRVLAEKESELVKAVEETKRVLAEKESELIKARAENKVELV-------TAHADARVLRVEARAIKAELENATFRLKAKNLEVLRLLGHSVNLRRAI 272
+A FWSS+GASAKLVLLPLRPCSWIQSGGSHVRS+ASMTNG+IGVSGKKQSVQDLFEALSWKRLDRKTLVDRARLMVAEKELELV KARAEN+VE+V A ADARVLRVEARA KAELENAT RLKAKNLEVLR LGHSVNLRRAI
Sbjct: 41 MASFWSSFGASAKLVLLPLRPCSWIQSGGSHVRSLASMTNGNIGVSGKKQSVQDLFEALSWKRLDRKTLVDRARLMVAEKELELV------------------------------------KARAENEVEVVKAHADARDAWADARVLRVEARATKAELENATLRLKAKNLEVLR-LGHSVNLRRAI 190
BLAST of EWM22255.1 vs. NCBI_GenBank
Match: gi|585099633|gb|EWM20206.1| (hypothetical protein Naga_100946g1 [Nannochloropsis gaditana]) HSP 1 Score: 162.925 bits (411), Expect = 6.742e-46 Identity = 79/85 (92.94%), Postives = 81/85 (95.29%), Query Frame = 0
Query: 324 AEMGHIYTTLSGRIHSSHQIGDAAVVIGTDVLTTEECLGVGALLYDFVPIEFHPPELMEKFERNEEEGTAEDVQDKAGKGEGERQ 408
A G I +TLSGRIHSSHQIGDAAVVIGTDVLTTEECLGVGALLYDFVPIEFHPPELMEKFERNE+EGTAEDVQDKAGKGEGERQ
Sbjct: 28 ARKGQI-STLSGRIHSSHQIGDAAVVIGTDVLTTEECLGVGALLYDFVPIEFHPPELMEKFERNEQEGTAEDVQDKAGKGEGERQ 111
BLAST of EWM22255.1 vs. NCBI_GenBank
Match: gi|553176856|ref|XP_005852410.1| (hypothetical protein NGA_0709800, partial [Nannochloropsis gaditana CCMP526] >gi|422296123|gb|EKU23422.1| hypothetical protein NGA_0709800, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 119.013 bits (297), Expect = 6.204e-28 Identity = 79/144 (54.86%), Postives = 86/144 (59.72%), Query Frame = 0
Query: 142 QSVQDLFEALSWKRLDRKTLVDRARLMVAEKELELVKAVEETKRVLAEKESELVKAVEETKRVLAEKESELIKARAENKVELVTAHADARVLRVEARAIKAELENATFRLKAKNLEVLRLLGHSVNLRRAIESFQEEEVLPRLC 285
QSV DLFEALSWKRLDR+TLVDRARL+VAEKELE+VKA RAEN+VE+V A A+ARVL EARA KAELE A LKAKNLE+LRL HSVNLRRAI E R C
Sbjct: 2 QSVVDLFEALSWKRLDRRTLVDRARLVVAEKELEVVKA------------------------------------RAENEVEVVKAQAEARVLWAEARATKAELETAAGHLKAKNLEILRLR-HSVNLRRAIGKCIEGIARGRAC 108 The following BLAST results are available for this feature:
BLAST of EWM22255.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 9
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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