EWM29817.1, cds840 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM29817.1 vs. NCBI_GenBank
Match: gi|585112398|gb|EWM29817.1| (microcystin synthetase-associated thioesterase [Nannochloropsis gaditana]) HSP 1 Score: 829.321 bits (2141), Expect = 0.000e+0 Identity = 399/399 (100.00%), Postives = 399/399 (100.00%), Query Frame = 0
Query: 1 MLTPFALYSLKTTGAGTKGSLKWSVVVFSVVSYHAILVEVMGCTSSKGCCLCCVPDAALKSCGPAVPIAKEITNGYPAPPGHGTHTPTHSQGLGEAIQTRTRCISACAVRCIHDHLPGHRHDHQRAPAKMREEEARKWLSVKRKDFARVRLVCFPYAGGNSNFYKTWDVKEAEMVTVELPGRNARYNEKVITDVYLIAKKIAAALAGLGYIESKIPLVFFGHSFGAIVSTLVAQILRNQYNYTPKHLVVSGCVPLHLRAGRPKFSVANDDELVSSLLDMGGITKEMARNRDVVTQFLPALKGDYLAVDKYVYHEAPPLDCPILALGSDQDLRVPQHETEEWARFTTKEFESRIFPGGHFFLKPLEKEVVAYVSSVIFRDLTGPGATDLPGFILFDPNKK 399
MLTPFALYSLKTTGAGTKGSLKWSVVVFSVVSYHAILVEVMGCTSSKGCCLCCVPDAALKSCGPAVPIAKEITNGYPAPPGHGTHTPTHSQGLGEAIQTRTRCISACAVRCIHDHLPGHRHDHQRAPAKMREEEARKWLSVKRKDFARVRLVCFPYAGGNSNFYKTWDVKEAEMVTVELPGRNARYNEKVITDVYLIAKKIAAALAGLGYIESKIPLVFFGHSFGAIVSTLVAQILRNQYNYTPKHLVVSGCVPLHLRAGRPKFSVANDDELVSSLLDMGGITKEMARNRDVVTQFLPALKGDYLAVDKYVYHEAPPLDCPILALGSDQDLRVPQHETEEWARFTTKEFESRIFPGGHFFLKPLEKEVVAYVSSVIFRDLTGPGATDLPGFILFDPNKK
Sbjct: 1 MLTPFALYSLKTTGAGTKGSLKWSVVVFSVVSYHAILVEVMGCTSSKGCCLCCVPDAALKSCGPAVPIAKEITNGYPAPPGHGTHTPTHSQGLGEAIQTRTRCISACAVRCIHDHLPGHRHDHQRAPAKMREEEARKWLSVKRKDFARVRLVCFPYAGGNSNFYKTWDVKEAEMVTVELPGRNARYNEKVITDVYLIAKKIAAALAGLGYIESKIPLVFFGHSFGAIVSTLVAQILRNQYNYTPKHLVVSGCVPLHLRAGRPKFSVANDDELVSSLLDMGGITKEMARNRDVVTQFLPALKGDYLAVDKYVYHEAPPLDCPILALGSDQDLRVPQHETEEWARFTTKEFESRIFPGGHFFLKPLEKEVVAYVSSVIFRDLTGPGATDLPGFILFDPNKK 399
BLAST of EWM29817.1 vs. NCBI_GenBank
Match: gi|585100986|gb|EWM20990.1| (microcystin synthetase-associated thioesterase [Nannochloropsis gaditana]) HSP 1 Score: 238.424 bits (607), Expect = 3.077e-72 Identity = 138/340 (40.59%), Postives = 195/340 (57.35%), Query Frame = 0
Query: 41 MGCTSSKGCCLCCVPDAALKSCGPAVPIAKEITNGYPAPPGHGTHTPTHSQGLGEAIQTRTRCISACAVRCIHDHLPGHRHDHQRAPAKMREEEARKWLSVKRKDFA--RVRLVCFPYAGGNSNFYKTWDVKEAEMVTVELPGRNARYNEKVITDVYLIAKKIAAALAGLGYIESKIPLVFFGHSFGAIVSTLVAQILRNQYNYTPKHLVVSGCVPLHLRAGRP-KFSVANDDELVSSLLDMGGITKEMARNRDVVTQFLPALKGDYLAVDKYVYHE-APPLDCPILALGSDQDLRVPQHETEEWARFTTKEFESRIFPGGHFFLKPLEKEVVAYVSSVI 376
MGC SS CC+P P V A E+ A P + PT SQ +A R P M E A+KWL K A +VR++C +AG NSN +KTWD+K E+V VELP RNAR+N+K I DV ++AKKI+ A +GY+ES PLV FGHSFGA++ +A+I++ +Y+YTPK + GC PLH R G P + +DDE++ S++D GG+TKEMA+++ +V+ L +K D+L +D+YV++E A L+ P+ +G D R P + EW R+TT + + FPGGHFFLK E +V+A++ VI
Sbjct: 36 MGCGSS-----CCIP--------PYVSKAIEVHAA--AEPKKASDAPTDSQSTFKA--------------------------GPRRPV-MSEAMAQKWLLSNGKPVAGAKVRIICLGWAGANSNVFKTWDLKCGEVVKVELPSRNARFNDKPIHDVNILAKKISQACFVMGYLESTTPLVIFGHSFGAMIGLHLARIMKKEYDYTPKMCIFGGCRPLH-RWGFPMSYYKEDDDEMIQSMVDCGGMTKEMAKDKLLVSSVLAGIKMDHLCMDRYVFNEKAEKLEAPLWLIGGLDDPRSPPEQLPEWDRYTTCSIQIKTFPGGHFFLKEKEADVLAWLGKVI 332
BLAST of EWM29817.1 vs. NCBI_GenBank
Match: gi|585101141|gb|EWM21085.1| (thioesterase [Nannochloropsis gaditana]) HSP 1 Score: 179.874 bits (455), Expect = 1.176e-49 Identity = 98/258 (37.98%), Postives = 144/258 (55.81%), Query Frame = 0
Query: 128 AKMREEEARKWLSVKR-KDFARVRLVCFPYAGGNSNFYKTWDV-KEAEMVTVELPGRNARYNEKVITDVYLIAKKIAAALAGLGYIESKIPLVF--------------FGHSFGAIVSTLVAQILRNQYNYTPKHL-----VVSGCVPLHLRAGRPKFSVANDDELVSSLLDMGGITKEMARNRDVVTQFLPALKGDYLAVDKYVYHEAPPLDCPILALGSDQDLRVPQHETEEWARFTT--KEFESRIFPGGHFFLK 362
A M EA++W + + A+ R++C +AGGNS+ Y+TWD+ E E+V VELPGRNAR E + + +L+ ++ A+ +GY+ S P FGHSFGA++ T +AQ LR + K + +VSG PL R G S +DD ++ L+ MGGI E+A +R+++ FLPA +GDY A+D YVY P L ++A + D R + E W + TT K+F +FPGGHFF+K
Sbjct: 50 APMPLSEAKRWFVCRAPRPEAKYRMLCLAWAGGNSSIYRTWDLGSEVEVVAVELPGRNARVKETPLKNFHLLVSRLLHAMEVVGYLPSSAPSFLPSSTSPPPLKPLLLFGHSFGAMLVTHLAQALRERREDEGKSVDVPLVLVSGMAPLDKRGGSTGVSAMSDDAMIQYLVKMGGIPSEVAASRELMNVFLPAFRGDYTAIDNYVYTPLPALPFRLVAFAGENDARASKEIMEGWVKMTTHEKDFAVDVFPGGHFFIK 307
BLAST of EWM29817.1 vs. NCBI_GenBank
Match: gi|299116155|emb|CBN76062.1| (fatty acid-ACP thioesterase [Ectocarpus siliculosus]) HSP 1 Score: 160.999 bits (406), Expect = 2.714e-43 Identity = 91/264 (34.47%), Postives = 141/264 (53.41%), Query Frame = 0
Query: 130 MREEEARKWLSVKR-KDFARVRLVCFPYAGGNSNFYKTWDVKEAEMV---TVELPGRNARYNEKVITDVYLIAKKIAAALAGLGYIESKIPLVFFGHSFGAIVSTLVAQILRNQYNYTPKHLVVSGCVPLHLRAG---RPKFSVANDDELVSSLLDMGGITKEMARNRDVVTQFLPALKGDYLAVDKYVYHEAP-----PLDCPILALGSDQDLRVPQHETEEWARFTTKEFESRIFPGGHFFLK-PLEKEVVAYVSSVIFRDL 380
M KW++ +R K A +RL C +AGG+++ + W K E V +ELPGR R E +T V I + +A AL +G ++ P FGHSFG++V +A+ L+ P +L+VSGC P + G P S D LV L+ +GG+ +E+ ++V FLP ++ DY A + Y Y P P+ CPI+ LG ++D R P+ + E W+ T EF ++F GGHFFL+ E+ V+ ++ ++ L
Sbjct: 1 MSSSALEKWVACRRVKADASIRLFCAAWAGGSASSFNKWTSKLPEAVELHALELPGRMRRSKEDSLTSVSAIVEGVAQALVTMGLLDK--PFALFGHSFGSLVMFELARKLKEDAGKIPVYLIVSGCCPPDMCVGGGSSPPISQLPRDALVDHLIGLGGMPEELRDQTELVDYFLPPIRADYTAYEGYRYELRPGDDSRPITCPIICLGGEEDGRAPRSDLERWSSLTAAEFRLQMFGGGHFFLQGEGEQAVLTFLGDILTEKL 262
BLAST of EWM29817.1 vs. NCBI_GenBank
Match: gi|1154767560|ref|WP_078684186.1| (hypothetical protein [Desulfovibrio bizertensis] >gi|1152131839|emb|SKA67754.1| medium-chain acyl-[acyl-carrier-protein] hydrolase [Desulfovibrio bizertensis DSM 18034]) HSP 1 Score: 156.762 bits (395), Expect = 1.574e-41 Identity = 85/241 (35.27%), Postives = 132/241 (54.77%), Query Frame = 0
Query: 148 RVRLVCFPYAGGNSNFYKTWDV---KEAEMVTVELPGRNARYNEKVITDVYLIAKKIAAALAGLGYIESKIPLVFFGHSFGAIVSTLVAQILRNQYNYTPKHLVVSGCV-PLHLRAGRPKFSVANDDELVSSLLDMGGITKEMARNRDVVTQFLPALKGDYLAVDKYVYHEAPPLDCPILALGSDQDLRVPQHETEEWARFTTKEFESRIFPGGHFFLKPLEKEVVAYVSSVIFRDLTGPG 384
R+RLVC PYAGG ++ ++ W ++ E++ V+LPGR R + +D+ +I K+ AAL Y++ PL FFG+S G ++ +A+ LR Q N P + V+ C P P++ + D E +L D+GG E+ N +++ +LPAL+ D+ + YV+ PP DCPI A D D PQ E++ W + TT F R FPGGHFF+ E+++ + S + L P
Sbjct: 19 RLRLVCLPYAGGGASLFRKWPQFLPEDIELLAVQLPGREKRLFDPPCSDLAVIVHKLRAALQN--YLD--CPLGFFGYSMGTRIAYELARTLREQDNIQPACMFVAACKGPQIEEPPNPRY-LLPDKEFKEALRDLGGTPDEVLENTELMDMYLPALRADFALKESYVHSPCPPFDCPITAYCGDHDKEAPQDESQTWDQETTAAFRLRCFPGGHFFIHDNLSELLSDMKSQLHITLREPS 254
BLAST of EWM29817.1 vs. NCBI_GenBank
Match: gi|918244401|ref|WP_052375403.1| (thioesterase [Chondromyces apiculatus] >gi|599567444|gb|EYF05488.1| putative thioesterase involved in non-ribosomal peptide biosynthesis [Chondromyces apiculatus DSM 436]) HSP 1 Score: 155.992 bits (393), Expect = 3.327e-41 Identity = 88/248 (35.48%), Postives = 127/248 (51.21%), Query Frame = 0
Query: 133 EEARKWLSVKRKDFA-RVRLVCFPYAGGNSNFYKTWDVK---EAEMVTVELPGRNARYNEKVITDVYLIAKKIAAALAGLGYIESKIPLVFFGHSFGAIVSTLVAQILRNQYNYTPKHLVVSGCVPLHLRAGRPKFSVANDDELVSSLLDMGGITKEMARNRDVVTQFLPALKGDYLAVDKYVYHEAPPLDCPILALGSDQDLRVPQHETEEWARFTTKEFESRIFPGGHFFLKPLEKEVVAYVSSVI 376
+ + KWL R A RVRL+C PYAGG + ++TW K + E++ ++LPGR R E ++ V + + L +S +P V FGHS GAI+S + + LRNQ + P L+VSG +L P +D L+ + GG +E+ R +++ LP L+ D+ + + Y A PL P+LALG D P E W EF SRIFPGGHFFL E V+ ++ I
Sbjct: 23 DASSKWLWRSRPGAAPRVRLICVPYAGGGAASFRTWPAKLPADVELLAIQLPGRGMRMGEPLLRRVEQVVDAVGPLL-----TDSPVPFVLFGHSMGAILSFNLCRWLRNQGHPLPARLIVSGHRAPNLPDPEPPKHHLSDAALLDRIRRYGGTPEEILREPELMELMLPILRADFELLGTHAYTSAAPLPVPLLALGGADDPNAPPDTIEAWREHAAGEFSSRIFPGGHFFLHTEEAAVLPVIAEEI 265
BLAST of EWM29817.1 vs. NCBI_GenBank
Match: gi|1121311269|ref|WP_073622413.1| (thioesterase [Calothrix sp. HK-06] >gi|1115279927|gb|OKH43166.1| putative thioesterase [Calothrix sp. HK-06]) HSP 1 Score: 154.836 bits (390), Expect = 5.468e-41 Identity = 80/248 (32.26%), Postives = 134/248 (54.03%), Query Frame = 0
Query: 133 EEARKWLSVKRKDFARVRLVCFPYAGGNSNFYKTWD---VKEAEMVTVELPGRNARYNEKVITDVYLIAKKIAAALAGLGYIESKIPLVFFGHSFGAIVSTLVAQILRNQYNYTPKHLVVSGCVPLHLRAGRPKFSVANDDELVSSLLDMGGITKEMARNRDVVTQFLPALKGDYLAVDKYVYHEAPPLDCPILALGSDQDLRVPQHETEEWARFTTKEFESRIFPGGHFFLKPLEKEVVAYVSSVIF 377
+ + +W+ + A R+ CFPYAG ++ ++ W + E E+ ++LPGR R E + T + + + ++ AL L Y++ +P FFGHS GA+VS VA+ L++ YN +PKHL VSG LR+ +P D+ + L G + + +N ++++ FLP L+ D+ D Y H PL+CPI A G QD V + W T +F +FPG HFF+K ++++ ++ ++
Sbjct: 5 QTSTRWICNQPNRQASKRMFCFPYAGAGASVFRNWSNQLLPEVEICPIQLPGREGRMAEPLFTKLSPLVEALSKAL--LPYLD--LPFTFFGHSMGALVSFEVARFLQSHYNISPKHLFVSGRQAPQLRSSKPPIHQLPDNLFIEELRRYNGTPEMVLQNHELLSLFLPILRADFAINDTYT-HTNMPLNCPITAFGGLQDSGVSLTDIAAWRYQTNSDFSMHMFPGDHFFIKNEREQLLLLIAETMY 247
BLAST of EWM29817.1 vs. NCBI_GenBank
Match: gi|1005323321|ref|WP_061608361.1| (thioesterase [Sorangium cellulosum] >gi|1005195667|gb|KYF69472.1| gramicidin dehydrogenase [Sorangium cellulosum]) HSP 1 Score: 154.451 bits (389), Expect = 8.067e-41 Identity = 90/250 (36.00%), Postives = 129/250 (51.60%), Query Frame = 0
Query: 138 WLSVKRKDFA-RVRLVCFPYAGGNSNFYKTWDVK---EAEMVTVELPGRNARYNEKVITDVYLIAKKIAAALAGLGYIESKIPLVFFGHSFGAIVSTLVAQILRNQYNYTPKHLVVSGCVPLHLRAGRPKFSVANDDELVSSLLDMGGITKEMARNRDVVTQFLPALKGDYLAVDKYVYHEAPPLDCPILALGSDQDLRVPQHETEEWARFTTKEFESRIFPGGHFFLKPLEKEVVAYVSSV---IFRDL 380
W+ R + A R+RL CFPYAGG ++ Y W + E+ ++LPGR AR +E + + + +A AL G P F+GHS GA+VS +A+ LR + P+HL VSG H P + DD ++ L MGG +E+ R D++ FLP L+ D + + PPLDCPI A G D D R + E W T F + +FPGGHFFL+ ++ +S+V + RDL
Sbjct: 10 WVGCPRPNPASRLRLFCFPYAGGGASIYSAWWRELPAHTELCAIKLPGREARLSEPPFERLTPLVQALATALDGW----LAKPFAFYGHSLGALVSFELARELRRRGAPLPRHLFVSGRRAPHQPISAPLHGLP-DDAFLAWLRRMGGTPEEVLREPDLLALFLPVLRADVAVNEAEPFVPGPPLDCPISAFGGDDDERASPADIEAWRELTRGPFRAEVFPGGHFFLRTARAPLLRSISAVLDDVARDL 254
BLAST of EWM29817.1 vs. NCBI_GenBank
Match: gi|1124241371|ref|WP_074541226.1| (thioesterase [Bacillus cereus] >gi|1152964868|gb|OOZ79399.1| thioesterase [Bacillus cereus]) HSP 1 Score: 153.68 bits (387), Expect = 1.533e-40 Identity = 76/234 (32.48%), Postives = 135/234 (57.69%), Query Frame = 0
Query: 149 VRLVCFPYAGGNSNFYKTWDVK---EAEMVTVELPGRNARYNEKVITDVYLIAKKIAAALAGLGYIESKIPLVFFGHSFGAIVSTLVAQILRNQYNYTPKHLVVSGCVPLHLRAGRPKFSVANDDELVSSLLDMGGITKEMARNRDVVTQFLPALKGDYLAVDKYVYHEAPPLDCPILALGSDQDLRVPQHETEEWARFTTKEFESRIFPGGHFFLKPLEKEVVAYVSSVIFRD 379
+RL CF YAGG+++ +K W ++ + E++ V+LPGR R EK ++ I ++A + L P VFFGHS GA++S ++ L+ ++ +P+ L++S HL + + L +MGG ++E+ RN++++ +P ++ D+ +KYVY E L+CPI+A G +D RV ++W + T+K F+ ++FPG HF+LK +EKE++ +S + +
Sbjct: 24 MRLFCFHYAGGSASNFKKWSIELPDQVEVIAVQLPGRENRIMEKPFNNIQSIICELAVEILPL----LDKPYVFFGHSMGALLSYEMSWYLKENFSTSPEKLIISSFRAPHLSPITNNMHDLSVPIFIEKLKEMGGTSEEILRNQELMELIIPTIRADFAVCEKYVYKERSKLNCPIVAYGGTEDSRVRLEHLKQWEKHTSKAFKVQMFPGNHFYLKEVEKELLYLISKELLEN 253
BLAST of EWM29817.1 vs. NCBI_GenBank
Match: gi|1005199749|gb|KYF72840.1| (gramicidin dehydrogenase [Sorangium cellulosum]) HSP 1 Score: 153.295 bits (386), Expect = 2.245e-40 Identity = 89/250 (35.60%), Postives = 130/250 (52.00%), Query Frame = 0
Query: 138 WLSVKRKDFA-RVRLVCFPYAGGNSNFYKTWDVK---EAEMVTVELPGRNARYNEKVITDVYLIAKKIAAALAGLGYIESKIPLVFFGHSFGAIVSTLVAQILRNQYNYTPKHLVVSGCVPLHLRAGRPKFSVANDDELVSSLLDMGGITKEMARNRDVVTQFLPALKGDYLAVDKYVYHEAPPLDCPILALGSDQDLRVPQHETEEWARFTTKEFESRIFPGGHFFLKPLEKEVVAYVSSV---IFRDL 380
W+ R + A R+RL CFPYAGG ++ Y W + E+ ++LPGR AR E + + + +A AL G P F+GHS GA+VS +A+ LR + P+HL VS HL P + +DD+ ++ L MGG +E+ R+ D++ FLP L+ D + + PPLDCP+ A G D R E E W T F + +FPGGHFFL+ ++ +S+V + RDL
Sbjct: 10 WVGCPRPNPASRLRLFCFPYAGGGASVYSAWWRELPAHTELCAIKLPGREARLGEPPFERLTPLVQALATALDGW----LAKPFAFYGHSLGALVSFELARELRRRGAPLPRHLFVSARRAPHLPIAAPLHGL-SDDDFLAWLRRMGGTPEEVLRDPDLLALFLPVLRADVAVNEAEPFVPGPPLDCPMSAFGGADDERASPAEMEAWREHTRGPFRTEVFPGGHFFLRTARAPLLRSISAVLDGVARDL 254 The following BLAST results are available for this feature:
BLAST of EWM29817.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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