EWM22278.1, cds8395 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22278.1 vs. NCBI_GenBank
Match: gi|585102748|gb|EWM22278.1| (peroxisomal hydratase-dehydrogenase-epimerase [Nannochloropsis gaditana]) HSP 1 Score: 236.498 bits (602), Expect = 7.447e-79 Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0 Query: 1 MTDQDWDLVYKVHLLGTYRVSKAAWPIMRQQKYGRIVNVSSASGLYGNEGQGNYAAMKMGIAGLSATLAKEGVRYDVKVLFLPLALPLLPVFPYDALPSLGVAFFLSSLSSPPLPSF 117 MTDQDWDLVYKVHLLGTYRVSKAAWPIMRQQKYGRIVNVSSASGLYGNEGQGNYAAMKMGIAGLSATLAKEGVRYDVKVLFLPLALPLLPVFPYDALPSLGVAFFLSSLSSPPLPSF Sbjct: 1 MTDQDWDLVYKVHLLGTYRVSKAAWPIMRQQKYGRIVNVSSASGLYGNEGQGNYAAMKMGIAGLSATLAKEGVRYDVKVLFLPLALPLLPVFPYDALPSLGVAFFLSSLSSPPLPSF 117
BLAST of EWM22278.1 vs. NCBI_GenBank
Match: gi|1173958797|gb|OQS05108.1| (hypothetical protein THRCLA_02713 [Thraustotheca clavata]) HSP 1 Score: 127.487 bits (319), Expect = 1.223e-33 Identity = 61/90 (67.78%), Postives = 72/90 (80.00%), Query Frame = 0 Query: 1 MTDQDWDLVYKVHLLGTYRVSKAAWPIMRQQKYGRIVNVSSASGLYGNEGQGNYAAMKMGIAGLSATLAKEGVRYDVKV-LFLPLALPLL 89 MT++DW+LV KVHL GT V+KAAWPIMR+Q YGRI+NVSSASGLYGN GQ NYAA KMGIAG S T AKEG R ++KV + PLA+ + Sbjct: 105 MTEEDWNLVMKVHLNGTMSVTKAAWPIMREQNYGRIINVSSASGLYGNVGQANYAAAKMGIAGFSLTAAKEGGRNNIKVNVIAPLAMSRM 194
BLAST of EWM22278.1 vs. NCBI_GenBank
Match: gi|673029904|ref|XP_008868913.1| (hypothetical protein H310_05855 [Aphanomyces invadans] >gi|574475308|gb|ETW02308.1| hypothetical protein H310_05855 [Aphanomyces invadans]) HSP 1 Score: 123.635 bits (309), Expect = 3.559e-32 Identity = 62/101 (61.39%), Postives = 73/101 (72.28%), Query Frame = 0 Query: 1 MTDQDWDLVYKVHLLGTYRVSKAAWPIMRQQKYGRIVNVSSASGLYGNEGQGNYAAMKMGIAGLSATLAKEGVRYDVKV-LFLPLALPLLPVFPYDALPSL 100 MT DWDLV +VHL GT V++AAWP MR+QKYGRIVNVSSASGLYGN GQ NYAA KMGIAG + T AKEG R ++KV + PLA+ + A P + Sbjct: 111 MTKNDWDLVMRVHLNGTMSVTRAAWPHMREQKYGRIVNVSSASGLYGNIGQTNYAAAKMGIAGFTFTAAKEGSRSNIKVNVVAPLAMSRMTETIETASPHV 211
BLAST of EWM22278.1 vs. NCBI_GenBank
Match: gi|813185881|ref|XP_012207112.1| (hypothetical protein SPRG_12670 [Saprolegnia parasitica CBS 223.65] >gi|641527915|gb|KDO22174.1| hypothetical protein SPRG_12670 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 121.709 bits (304), Expect = 2.434e-31 Identity = 59/91 (64.84%), Postives = 69/91 (75.82%), Query Frame = 0 Query: 1 MTDQDWDLVYKVHLLGTYRVSKAAWPIMRQQKYGRIVNVSSASGLYGNEGQGNYAAMKMGIAGLSATLAKEGVRYDVKV-LFLPLALPLLP 90 MTD+DW V VHL GT V+KAAWPI+R Q+YGRI+NVSSASGLYGN GQ NY A KMGIAGLS T AKEG R ++KV + PLA+ + Sbjct: 109 MTDEDWHSVLNVHLNGTMSVTKAAWPILRAQQYGRIINVSSASGLYGNVGQANYGAAKMGIAGLSFTAAKEGRRNNIKVNVIAPLAMSRMT 199
BLAST of EWM22278.1 vs. NCBI_GenBank
Match: gi|698788036|ref|XP_009827050.1| (hypothetical protein H257_04312, partial [Aphanomyces astaci] >gi|574118139|gb|ETV83620.1| hypothetical protein H257_04312, partial [Aphanomyces astaci]) HSP 1 Score: 121.324 bits (303), Expect = 3.428e-31 Identity = 59/101 (58.42%), Postives = 74/101 (73.27%), Query Frame = 0 Query: 1 MTDQDWDLVYKVHLLGTYRVSKAAWPIMRQQKYGRIVNVSSASGLYGNEGQGNYAAMKMGIAGLSATLAKEGVRYDVKV-LFLPLALPLLPVFPYDALPSL 100 MT DWDLV +VHL GT V+K+AWP MR+Q++GRIVNV+SASGLYGN GQ NYAA KMGIAG + T AKEG+R ++KV + PLA+ + A P + Sbjct: 109 MTQDDWDLVLRVHLNGTMSVTKSAWPHMREQQFGRIVNVTSASGLYGNIGQANYAAAKMGIAGFTFTAAKEGIRSNIKVNVVAPLAMSRMTETIESASPKV 209
BLAST of EWM22278.1 vs. NCBI_GenBank
Match: gi|1214672903|gb|OWY96036.1| (Peroxisomal multifunctional enzyme type 2, partial [Phytophthora megakarya]) HSP 1 Score: 117.087 bits (292), Expect = 6.421e-31 Identity = 55/86 (63.95%), Postives = 68/86 (79.07%), Query Frame = 0 Query: 1 MTDQDWDLVYKVHLLGTYRVSKAAWPIMRQQKYGRIVNVSSASGLYGNEGQGNYAAMKMGIAGLSATLAKEGVRYDVKV-LFLPLA 85 MT Q WD VYKVHL GT RV+KAAW MR+Q++GRIVN++SASGLYGN GQ NY+AMK+GIAGL+ TL KEG + ++ + PLA Sbjct: 95 MTQQQWDDVYKVHLEGTMRVTKAAWETMREQEFGRIVNIASASGLYGNFGQANYSAMKLGIAGLTFTLCKEGAKRNIMANVVAPLA 180
BLAST of EWM22278.1 vs. NCBI_GenBank
Match: gi|1173954113|gb|OQS01606.1| (hypothetical protein ACHHYP_00576 [Achlya hypogyna]) HSP 1 Score: 120.168 bits (300), Expect = 7.047e-31 Identity = 59/90 (65.56%), Postives = 66/90 (73.33%), Query Frame = 0 Query: 1 MTDQDWDLVYKVHLLGTYRVSKAAWPIMRQQKYGRIVNVSSASGLYGNEGQGNYAAMKMGIAGLSATLAKEGVRYDVKV-LFLPLALPLL 89 MT DWD V VHL GT V+KAAWPIMR Q YGRI+NVSSASGLYGN GQ NY A KMGIAG S T AKEG R ++KV + PLA+ + Sbjct: 98 MTTDDWDAVINVHLNGTMSVTKAAWPIMRAQNYGRIINVSSASGLYGNVGQANYGAAKMGIAGFSFTAAKEGGRNNIKVNVIAPLAMSRM 187
BLAST of EWM22278.1 vs. NCBI_GenBank
Match: gi|1062157258|gb|ODO03864.1| (multifunctional beta-oxidation protein [Cryptococcus depauperatus CBS 7855]) HSP 1 Score: 123.635 bits (309), Expect = 2.236e-30 Identity = 57/110 (51.82%), Postives = 76/110 (69.09%), Query Frame = 0 Query: 1 MTDQDWDLVYKVHLLGTYRVSKAAWPIMRQQKYGRIVNVSSASGLYGNEGQGNYAAMKMGIAGLSATLAKEGVRYDVKV-LFLPLALPLL--PVFPYDALPSLGVAFFLS 107 M+DQDWDLV VHL G+Y +KA WP RQQK+GR+VN SSA+GLYGN GQ NY+A KMG+ G + TLA+EG++Y++K + +P+A + + P D L L F S Sbjct: 108 MSDQDWDLVIAVHLKGSYSCTKACWPYFRQQKFGRVVNTSSAAGLYGNRGQANYSAAKMGLVGFTRTLAREGIKYNIKTNVIVPMAASAMTETILPPDMLKGLKPEFIAS 217 HSP 2 Score: 91.2781 bits (225), Expect = 4.740e-19 Identity = 39/79 (49.37%), Postives = 55/79 (69.62%), Query Frame = 0 Query: 1 MTDQDWDLVYKVHLLGTYRVSKAAWPIMRQQKYGRIVNVSSASGLYGNEGQGNYAAMKMGIAGLSATLAKEGVRYDVKV 79 M++Q WD V +VH+ GT++ KA WPI +QQKYGRI+ +S +G+YG GQ NY+ K GI G + +LA EG + +KV Sbjct: 407 MSEQMWDQVIQVHMRGTFKCVKAVWPIFQQQKYGRIITTASPNGIYGTIGQANYSTAKAGIVGFARSLAIEGSGHGIKV 485
BLAST of EWM22278.1 vs. NCBI_GenBank
Match: gi|1062143901|gb|ODN90554.1| (multifunctional beta-oxidation protein [Cryptococcus depauperatus CBS 7841]) HSP 1 Score: 122.865 bits (307), Expect = 3.851e-30 Identity = 56/110 (50.91%), Postives = 76/110 (69.09%), Query Frame = 0 Query: 1 MTDQDWDLVYKVHLLGTYRVSKAAWPIMRQQKYGRIVNVSSASGLYGNEGQGNYAAMKMGIAGLSATLAKEGVRYDVKV-LFLPLALPLL--PVFPYDALPSLGVAFFLS 107 M+DQDWDLV +HL G+Y +KA WP RQQK+GR+VN SSA+GLYGN GQ NY+A KMG+ G + TLA+EG++Y++K + +P+A + + P D L L F S Sbjct: 108 MSDQDWDLVIAIHLKGSYSCTKACWPYFRQQKFGRVVNTSSAAGLYGNRGQANYSAAKMGLVGFTRTLAREGIKYNIKTNVIVPMAASAMTETILPPDMLKGLKPEFIAS 217 HSP 2 Score: 90.8929 bits (224), Expect = 5.326e-19 Identity = 39/79 (49.37%), Postives = 55/79 (69.62%), Query Frame = 0 Query: 1 MTDQDWDLVYKVHLLGTYRVSKAAWPIMRQQKYGRIVNVSSASGLYGNEGQGNYAAMKMGIAGLSATLAKEGVRYDVKV 79 M++Q WD V +VH+ GT++ KA WPI +QQKYGRI+ +S +G+YG GQ NY+ K GI G + +LA EG + +KV Sbjct: 407 MSEQMWDQVIQVHMRGTFKCVKAVWPIFQQQKYGRIITTASPNGIYGTIGQANYSTAKAGIVGFARSLAIEGSGHGIKV 485
BLAST of EWM22278.1 vs. NCBI_GenBank
Match: gi|669158514|ref|XP_008614819.1| (hypothetical protein SDRG_10601 [Saprolegnia diclina VS20] >gi|530733570|gb|EQC31812.1| hypothetical protein SDRG_10601 [Saprolegnia diclina VS20]) HSP 1 Score: 117.857 bits (294), Expect = 6.434e-30 Identity = 57/91 (62.64%), Postives = 66/91 (72.53%), Query Frame = 0 Query: 1 MTDQDWDLVYKVHLLGTYRVSKAAWPIMRQQKYGRIVNVSSASGLYGNEGQGNYAAMKMGIAGLSATLAKEGVRYDVKV-LFLPLALPLLP 90 MTD DW V VHL GT V+KAAWPI+R Q YGR++NVSSASGLYGN GQ NY A KMGIAG S T AKEG R ++KV + PLA+ + Sbjct: 109 MTDDDWHSVLNVHLNGTMSVTKAAWPILRAQNYGRVINVSSASGLYGNVGQANYGAAKMGIAGFSFTAAKEGSRNNIKVNVIAPLAMSRMT 199 The following BLAST results are available for this feature:
BLAST of EWM22278.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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