EWM29835.1, cds839 (CDS) Nannochloropsis gaditana

Overview
NameEWM29835.1
Unique Namecds839
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:541514..541815 -
Alignment locationCM002456.1:539221..541384 -

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Properties
Property NameValue
Protein idEWM29835.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100017g30.333.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:541514..541815 -
CM002456.1supercontigCM002456.1:539221..541384 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
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BLAST of EWM29835.1 vs. NCBI_GenBank
Match: gi|585112416|gb|EWM29835.1| (hypothetical protein Naga_100017g30 [Nannochloropsis gaditana])

HSP 1 Score: 1675.99 bits (4339), Expect = 0.000e+0
Identity = 821/821 (100.00%), Postives = 821/821 (100.00%), Query Frame = 0 
Query:    1 MWRDEEKKSGSGISKATHEASETPWPRQRLVDYLHVETPTSSAFSHLIPKWLGKSFLSQLREGERKVSDIRGPPPRPPLIFVACADPFVIENLVSDAFEKRSNNLPHIRIHFQSKKDKGEEDVDLQLCSQVRPHYQETALLSLTENGETHGADVSLKAGTVVLDLSSLLSLPNSSSSSIKMLRRVLAWIERQQVSPRHVEGENRQRGESLQFILTATTPLALWRLQNVAREQYQEQTQKNYAKRGEDESESNVSATHDRGDTPIFHLQILGPNHDLLVRQVDWLLKSTCLSPDSTPVELTLTRADSPSKEGMSKPPPDSKPEESSGVSPSPNHVAAEVDNEASDELILNEFLSFRPSLGVLSSLSGAKDAKEGAKRVKDLVATETARLRVLLEGGGGKSHTDQPCMKAVLLWDVLQAIHGESIDIITCGNVQSAAQRGIVSLEKVLQLCDNNFGQLEALLAEGWLEFYYPEIDQTLQNGSSAEGENEKGRGKSYRHAHIEKNPTARETLTADGALSAWSDPLVMRKGSERMGESSAEILRAFHSEGEEGGAEVVNGTAVRSQLRSTEVALGSLNDQNPLLVCQGSFENLHGSDTDDDDKGLDSVPLPRWLTTPATVALAWKNLEMDPALIKRMNVRADARHFVQEASLLQYHRQALSAEWAELYRGRGALRARASELTDEDFINLQLELIRLEKGAASRALEMSLRRKRLQELHRALGDSLSAEETPSMELLKGEVPQPTRHVFEKGAVVGEEIPGPYIEGQDPYDELPIEERVLVEMDRGLRGVPVVDVTASMSSSRAQEEDKETAAAWKWWPWRRKRTD 821
            MWRDEEKKSGSGISKATHEASETPWPRQRLVDYLHVETPTSSAFSHLIPKWLGKSFLSQLREGERKVSDIRGPPPRPPLIFVACADPFVIENLVSDAFEKRSNNLPHIRIHFQSKKDKGEEDVDLQLCSQVRPHYQETALLSLTENGETHGADVSLKAGTVVLDLSSLLSLPNSSSSSIKMLRRVLAWIERQQVSPRHVEGENRQRGESLQFILTATTPLALWRLQNVAREQYQEQTQKNYAKRGEDESESNVSATHDRGDTPIFHLQILGPNHDLLVRQVDWLLKSTCLSPDSTPVELTLTRADSPSKEGMSKPPPDSKPEESSGVSPSPNHVAAEVDNEASDELILNEFLSFRPSLGVLSSLSGAKDAKEGAKRVKDLVATETARLRVLLEGGGGKSHTDQPCMKAVLLWDVLQAIHGESIDIITCGNVQSAAQRGIVSLEKVLQLCDNNFGQLEALLAEGWLEFYYPEIDQTLQNGSSAEGENEKGRGKSYRHAHIEKNPTARETLTADGALSAWSDPLVMRKGSERMGESSAEILRAFHSEGEEGGAEVVNGTAVRSQLRSTEVALGSLNDQNPLLVCQGSFENLHGSDTDDDDKGLDSVPLPRWLTTPATVALAWKNLEMDPALIKRMNVRADARHFVQEASLLQYHRQALSAEWAELYRGRGALRARASELTDEDFINLQLELIRLEKGAASRALEMSLRRKRLQELHRALGDSLSAEETPSMELLKGEVPQPTRHVFEKGAVVGEEIPGPYIEGQDPYDELPIEERVLVEMDRGLRGVPVVDVTASMSSSRAQEEDKETAAAWKWWPWRRKRTD
Sbjct:    1 MWRDEEKKSGSGISKATHEASETPWPRQRLVDYLHVETPTSSAFSHLIPKWLGKSFLSQLREGERKVSDIRGPPPRPPLIFVACADPFVIENLVSDAFEKRSNNLPHIRIHFQSKKDKGEEDVDLQLCSQVRPHYQETALLSLTENGETHGADVSLKAGTVVLDLSSLLSLPNSSSSSIKMLRRVLAWIERQQVSPRHVEGENRQRGESLQFILTATTPLALWRLQNVAREQYQEQTQKNYAKRGEDESESNVSATHDRGDTPIFHLQILGPNHDLLVRQVDWLLKSTCLSPDSTPVELTLTRADSPSKEGMSKPPPDSKPEESSGVSPSPNHVAAEVDNEASDELILNEFLSFRPSLGVLSSLSGAKDAKEGAKRVKDLVATETARLRVLLEGGGGKSHTDQPCMKAVLLWDVLQAIHGESIDIITCGNVQSAAQRGIVSLEKVLQLCDNNFGQLEALLAEGWLEFYYPEIDQTLQNGSSAEGENEKGRGKSYRHAHIEKNPTARETLTADGALSAWSDPLVMRKGSERMGESSAEILRAFHSEGEEGGAEVVNGTAVRSQLRSTEVALGSLNDQNPLLVCQGSFENLHGSDTDDDDKGLDSVPLPRWLTTPATVALAWKNLEMDPALIKRMNVRADARHFVQEASLLQYHRQALSAEWAELYRGRGALRARASELTDEDFINLQLELIRLEKGAASRALEMSLRRKRLQELHRALGDSLSAEETPSMELLKGEVPQPTRHVFEKGAVVGEEIPGPYIEGQDPYDELPIEERVLVEMDRGLRGVPVVDVTASMSSSRAQEEDKETAAAWKWWPWRRKRTD 821
The following BLAST results are available for this feature:
BLAST of EWM29835.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 1
Match NameE-valueIdentityDescription
gi|585112416|gb|EWM29835.1|0.000e+0100.00hypothetical protein Naga_100017g30 [Nannochlorops... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna839rna839Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications