EWM22288.1, cds8386 (CDS) Nannochloropsis gaditana

Overview
NameEWM22288.1
Unique Namecds8386
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:620014..620062 -
Alignment locationKK037248.1:618942..619483 -
Alignment locationKK037248.1:618536..618763 -
Alignment locationKK037248.1:618349..618465 -
Alignment locationKK037248.1:618032..618199 -
Alignment locationKK037248.1:617601..617708 -
Alignment locationKK037248.1:617280..617422 -
Alignment locationKK037248.1:616791..616905 -
Alignment locationKK037248.1:616507..616596 -
Alignment locationKK037248.1:616236..616321 -
Alignment locationKK037248.1:615961..616108 -
Alignment locationKK037248.1:615465..615839 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22288.1
ProductStress-induced protein SRP1/TIP1
Orig transcript idgnl|cribi|Naga_100224g3.5619.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:620014..620062 -
KK037248.1supercontigKK037248.1:618942..619483 -
KK037248.1supercontigKK037248.1:618536..618763 -
KK037248.1supercontigKK037248.1:618349..618465 -
KK037248.1supercontigKK037248.1:618032..618199 -
KK037248.1supercontigKK037248.1:617601..617708 -
KK037248.1supercontigKK037248.1:617280..617422 -
KK037248.1supercontigKK037248.1:616791..616905 -
KK037248.1supercontigKK037248.1:616507..616596 -
KK037248.1supercontigKK037248.1:616236..616321 -
KK037248.1supercontigKK037248.1:615961..616108 -
KK037248.1supercontigKK037248.1:615465..615839 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0006950response to stress
Vocabulary: INTERPRO
TermDefinition
IPR000992SRP1_TIP1
IPR027295Quinonprotein_ADH-like_fam
Homology
BLAST of EWM22288.1 vs. NCBI_GenBank
Match: gi|585102762|gb|EWM22288.1| (Stress-induced protein SRP1/TIP1 [Nannochloropsis gaditana])

HSP 1 Score: 1481.85 bits (3835), Expect = 0.000e+0
Identity = 722/722 (100.00%), Postives = 722/722 (100.00%), Query Frame = 0
Query:    1 MRVFVETPCTFTRENVSFKSSRRRPAYFTVMRSLHQGNEMPNAEWELDRSSWPIVHGSRESLDYTSLPTPLTAALHFYNSQGLSPSARAASSFTMLRDDTEGVDDKKGEEEEGKVYRRVIDAMRELLLAKGQEDGARAVEDAIHAYMRKGGKRFSMANANPVSIITERVNEQEQRLWTSGFKHVLVFRQVLGAPTLELLAEYEHGGFDFHYHGSYSFVAKSKPESSEGGREGGGREGGRGEGSRGKPVHICGCGEARHLHLYIDGKGRRGGKPEGEDLREDGAEDGAEEDDESNSIVGVTLTEDGTVVVAAKGGNVTALRHNPSLAASTPTAQAGESALRPVAYFPLSRVVASSAPIHISNSLAVHGQGVYIVTQEEMVRLDMDTSSASLKFRWATPYGRGGLPWYTSRLGPGSGSTPSLTSCQGRDMVVITDGELRMNLIYLDAETGGEGGCKAFVVNNYVGTDGLDADTQCTDAPGVKGKEELAAFCNMLQPTFISKVCPAVFGCMAYGAAMYTLDEEQKALKQLWARDDVSCGTSIPLISGPSDGSPSSTYCVGMLRNSSRWTLLALDTETGEERFRFPYYSEGKDRVANFFGNPYYAGVEAVAPGTLAMGSIGGLIYLTPTGPTSRLHSPPSAVASSASARPASAARVRESRARGVDGNSIQALGLVGIVMGLVLSLGLLVRAWHRAKQNEGRARRRAVEGEDGLGGGYLPLAEDDRI 722
            MRVFVETPCTFTRENVSFKSSRRRPAYFTVMRSLHQGNEMPNAEWELDRSSWPIVHGSRESLDYTSLPTPLTAALHFYNSQGLSPSARAASSFTMLRDDTEGVDDKKGEEEEGKVYRRVIDAMRELLLAKGQEDGARAVEDAIHAYMRKGGKRFSMANANPVSIITERVNEQEQRLWTSGFKHVLVFRQVLGAPTLELLAEYEHGGFDFHYHGSYSFVAKSKPESSEGGREGGGREGGRGEGSRGKPVHICGCGEARHLHLYIDGKGRRGGKPEGEDLREDGAEDGAEEDDESNSIVGVTLTEDGTVVVAAKGGNVTALRHNPSLAASTPTAQAGESALRPVAYFPLSRVVASSAPIHISNSLAVHGQGVYIVTQEEMVRLDMDTSSASLKFRWATPYGRGGLPWYTSRLGPGSGSTPSLTSCQGRDMVVITDGELRMNLIYLDAETGGEGGCKAFVVNNYVGTDGLDADTQCTDAPGVKGKEELAAFCNMLQPTFISKVCPAVFGCMAYGAAMYTLDEEQKALKQLWARDDVSCGTSIPLISGPSDGSPSSTYCVGMLRNSSRWTLLALDTETGEERFRFPYYSEGKDRVANFFGNPYYAGVEAVAPGTLAMGSIGGLIYLTPTGPTSRLHSPPSAVASSASARPASAARVRESRARGVDGNSIQALGLVGIVMGLVLSLGLLVRAWHRAKQNEGRARRRAVEGEDGLGGGYLPLAEDDRI
Sbjct:    1 MRVFVETPCTFTRENVSFKSSRRRPAYFTVMRSLHQGNEMPNAEWELDRSSWPIVHGSRESLDYTSLPTPLTAALHFYNSQGLSPSARAASSFTMLRDDTEGVDDKKGEEEEGKVYRRVIDAMRELLLAKGQEDGARAVEDAIHAYMRKGGKRFSMANANPVSIITERVNEQEQRLWTSGFKHVLVFRQVLGAPTLELLAEYEHGGFDFHYHGSYSFVAKSKPESSEGGREGGGREGGRGEGSRGKPVHICGCGEARHLHLYIDGKGRRGGKPEGEDLREDGAEDGAEEDDESNSIVGVTLTEDGTVVVAAKGGNVTALRHNPSLAASTPTAQAGESALRPVAYFPLSRVVASSAPIHISNSLAVHGQGVYIVTQEEMVRLDMDTSSASLKFRWATPYGRGGLPWYTSRLGPGSGSTPSLTSCQGRDMVVITDGELRMNLIYLDAETGGEGGCKAFVVNNYVGTDGLDADTQCTDAPGVKGKEELAAFCNMLQPTFISKVCPAVFGCMAYGAAMYTLDEEQKALKQLWARDDVSCGTSIPLISGPSDGSPSSTYCVGMLRNSSRWTLLALDTETGEERFRFPYYSEGKDRVANFFGNPYYAGVEAVAPGTLAMGSIGGLIYLTPTGPTSRLHSPPSAVASSASARPASAARVRESRARGVDGNSIQALGLVGIVMGLVLSLGLLVRAWHRAKQNEGRARRRAVEGEDGLGGGYLPLAEDDRI 722          
BLAST of EWM22288.1 vs. NCBI_GenBank
Match: gi|553186837|ref|XP_005854498.1| (hypothetical protein NGA_0187300 [Nannochloropsis gaditana CCMP526] >gi|422294559|gb|EKU21859.1| hypothetical protein NGA_0187300 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 349.362 bits (895), Expect = 1.043e-113
Identity = 168/171 (98.25%), Postives = 169/171 (98.83%), Query Frame = 0
Query:   31 MRSLHQGNEMPNAEWELDRSSWPIVHGSRESLDYTSLPTPLTAALHFYNSQGLSPSARAASSFTMLRDDTEGVDDKKGEEEEGKVYRRVIDAMRELLLAKGQEDGARAVEDAIHAYMRKGGKRFSMANANPVSIITERVNEQEQRLWTSGFKHVLVFRQVLGAPTLELLAE 201
            MRSLHQGNEMPNAEWELDRSSWPIVHGSRESLDYTSLPTPLTAALHFYNSQGLSPSARAASSFTMLRDDTEGVDDKKGEEEEGKVYRRVIDAMRELLLAKGQEDGARAVEDAIHAYMRKGGKRFSMANANPVSIITERVNEQEQRLWTSGFKHVLVFRQVLGAPTLE+  E
Sbjct:    1 MRSLHQGNEMPNAEWELDRSSWPIVHGSRESLDYTSLPTPLTAALHFYNSQGLSPSARAASSFTMLRDDTEGVDDKKGEEEEGKVYRRVIDAMRELLLAKGQEDGARAVEDAIHAYMRKGGKRFSMANANPVSIITERVNEQEQRLWTSGFKHVLVFRQVLGAPTLEVRRE 171          
BLAST of EWM22288.1 vs. NCBI_GenBank
Match: gi|585107336|gb|EWM25561.1| (hypothetical protein Naga_100359g6 [Nannochloropsis gaditana])

HSP 1 Score: 321.627 bits (823), Expect = 7.822e-96
Identity = 223/629 (35.45%), Postives = 314/629 (49.92%), Query Frame = 0
Query:   47 LDRSSWPIVHGSRESLDYTSLPTP---LTAALHFYNSQGLSPSARAASSFTMLRDDTEGVDDKKGEEEEGKVYRRVIDAMRELLLAK-GQEDGARAVEDAIHAYMRKGGK--RFSMANANPVSIITERVNEQEQRLWTSGFKHVLVFRQVLGAPTLELLAEYEHGGFDFHYHGSYSFVAKSKPESS--EGGREGGGREGGRGEGSRGKPVHICGCGEARHLHLYIDGKGRRGGKPEGEDLREDGAEDGAEEDDESNSIVGVTLTEDGTVVVAAKGGNVTALRHNPSLAASTPTAQAGESALRPVAYFPLSRVVASSAPIHISNSLAVHGQGVYIVTQEEMVRLDMDTSSASLKFRWATPYGRG---GLPWYTSRLGPGSGSTPSLTSCQGRDMVVITDGELRMNLIYLDAETGG-------------EG-------------GCKAFVVNNYVGTDGLDADTQCTDA--PGVKGKEELAAFC------NMLQPTFISKVCPAVFGCMAYGAAMYTLDEEQKA-LKQLWARDDVSCGTSIPLISGPSDGSPSS--TYCVGMLRNSSRWTLLALDTETGEERFRFPYYSEGKDRVANFFGNPYYAGVEAVAPGTLAMGSIGGLIYLTPTGP 627
            LD S WPIVHG+R S D+TS+  P    T   + YNSQ +                         EEE   +Y      M +LL    G+  G +       ++  + G    F++ +AN VS+ITERV++ E RLWTS   +++VFRQV  AP L+ LA Y+HG  +  +HGSY+FVA +  E++      +   R   +G    G  +        R   L +  +       +G   +E           + + +VG+TL EDGT+V  +KGG + A R N          +AGE   +   +  L+   A   P  +SNS++  GQ +++VT  E++ LD D SS  L F+W   Y         W+  RLGPGSGSTPS+TSC G+++VVITDG   MNL++ DA TG              EG             GCKAFVV NY+G D L  D  C  A  PG   +  L  +C      N  +  F  + CP  FGC AYGAA+Y L     + ++++WARDDVSCGTSIPL+S      P S   YCVG  + S +W+LL +D +TG +R    +Y    +   N   NP+YAGVEA    T+ +G+IGG+++L+P  P
Sbjct:   69 LDLSPWPIVHGTRGSADHTSMKQPHGERTQRFYLYNSQRI-----------------------HDEEEANGLY------MGQLLAQNVGRGPGTQPAGQDAPSFFEEAGALIDFNIDDANAVSVITERVSDTETRLWTSTIGNIVVFRQVQNAPGLQRLATYDHGQ-NKRFHGSYAFVASNGTENAFFTTMEDKVARFVLKGNDQEGWTI-------VRVSELALPSQSPLASLAQGTHTQE-----------KKDHLVGLTLLEDGTIVSGSKGGVIMASRLN----------EAGEVVYKD--HLSLNDY-AEGGPAWVSNSISSTGQSIFVVTHRELMCLDYDPSSKKLAFKWTALYQPNPAVADAWFVGRLGPGSGSTPSVTSCNGQELVVITDGISPMNLLWYDARTGALVAKRKVQFGADPEGEAPTTSEQSVAVDGCKAFVVQNYMGEDRLSDDVTCISATRPGSSLRHRLGDYCLSRKDPNNPKDLFPVRACPIAFGCSAYGAALYELAGAGSSDVRRVWARDDVSCGTSIPLLS----THPESRMAYCVGFKKGSYQWSLLGMDLDTGVDRTHLQFYE--TNWALNALANPFYAGVEATGENTMTIGAIGGVLHLSPETP 630          
BLAST of EWM22288.1 vs. NCBI_GenBank
Match: gi|585105757|gb|EWM24361.1| (hypothetical protein Naga_100163g9 [Nannochloropsis gaditana])

HSP 1 Score: 306.22 bits (783), Expect = 1.014e-90
Identity = 211/638 (33.07%), Postives = 309/638 (48.43%), Query Frame = 0
Query:   37 GNEMPNAEWELDRSSWPIVHGSRESLDYTSLPTPLTAALHFYNSQGLSPSARAASSFTMLRDDTEGVDDKKGEEEEGKVYRRVIDAMRELLLAKGQEDGARAVEDAIHAYMRKGGKRFSMANANPVSIITERVNEQEQRLWTSGFKHVLVFRQVLGAP-TLELLAEYEHGGFDFHYHGSYSFVAKSKPES-----------SEGGREGGGREGGRGEGSRGKPVHICGCGEARHLHLYIDGKGRRGGKPEGEDLREDGAEDGAEEDDESNSIVGVTLTEDGTVVVAAKGGNVTALRHNPSLAASTPTAQAGESALRPVAYFPLSRVVASSAPIHISNSLAVHGQGVYIVTQEEMVRLDMDTSSASLKFRWATPYGRGGLPWYTSRLGPGSGSTPSLTSCQGRDMVVITDGELRMNLIYLDAETG--------------------------GEGGCKAFVVNNYVGTDGLDADTQCTDAP-GVKGKEELAAFCNMLQP-----TFISKVCPAVFGCMAYGAAMYTLDEE------QKALKQLWARDDVSCGTSIPLISGPSDGSPSSTYCVGMLRNSSRWTLLALDTETGEERFRFPYYSEGKDRVANFFGNPYYAGVEAVAPGTLAMGSIGGLIYLTP 624
            G + P     L    WPIVHG+ +S D +    P+TAA          P   A S     + D  GV                   +   +L   +  G R++ D     +      FS+A++NPVS+IT++  +    LWTS  ++V+V++    AP TL+ +A+Y+HG ++F +HGSY+FV +   +S           S    E GGR+GG      GK            L ++ +        P G D                  +VGVT+ +DGTVVV +K G + A R +          + G   +  +A    +R   +     +SNS++  GQG++IVTQ E+ R+D + ++  L F+W+T YG    PWY  RLGPG+GSTPS++ C GR  +VITDG + MN+++ DAE G                             GCKAFVV NY+G   LD    CT AP G   +E++   C+ L P      F+S+ CP   GC + G A+Y +D        Q  + + W R D SCGTSIPLIS  S+ +    YCVG    SS+WTLL +D +TG++ F   +Y E   R  N F NP+YAGVEA+    + +GS+GG++Y++P
Sbjct:   22 GGKAPTVPITLAPEGWPIVHGTVQSKDNSDYSGPVTAA---------GPFTFATSQTINEKPDNTGV----------------AQMLLTSMLGASKNGGLRSMADQASVLLG-----FSLADSNPVSVITDKRPDGSTLLWTSTIRNVIVYKVSPEAPGTLQEVAKYDHG-YNFRFHGSYAFVGEVNGQSHFFTTDNDSLVSYTLVEEGGRKGGYSIKPLGK----------LALPVWTN--------PSGAD-----------------HLVGVTVLDDGTVVVCSKTGVLMASRAD---------GKGGFVLMDTLALGDFTRTSNN----EVSNSISADGQGIFIVTQREVCRVDFNPATGRLGFKWSTIYGPEA-PWYIGRLGPGAGSTPSISECGGRKTIVITDGAMPMNVLWYDAEKGVLAGSRKVQFTEDENGNLPTQSEQSVAVDGCKAFVVQNYMGMTELDDSVFCTTAPQGGFVREQIPQICDQLLPYNSTDLFLSRACPPALGCYSPGMAVYEMDPHAMESNGQNKVSRAWTRMDKSCGTSIPLISKGSNAA----YCVGAEAGSSQWTLLGMDMDTGKDVFSHQFYEEFGAR--NIFINPFYAGVEAIGDNEIVIGSVGGIVYVSP 573          
BLAST of EWM22288.1 vs. NCBI_GenBank
Match: gi|585105756|gb|EWM24360.1| (hypothetical protein Naga_100163g9 [Nannochloropsis gaditana])

HSP 1 Score: 306.22 bits (783), Expect = 2.380e-90
Identity = 212/638 (33.23%), Postives = 308/638 (48.28%), Query Frame = 0
Query:   37 GNEMPNAEWELDRSSWPIVHGSRESLDYTSLPTPLTAALHFYNSQGLSPSARAASSFTMLRDDTEGVDDKKGEEEEGKVYRRVIDAMRELLLAKGQEDGARAVEDAIHAYMRKGGKRFSMANANPVSIITERVNEQEQRLWTSGFKHVLVFRQVLGAP-TLELLAEYEHGGFDFHYHGSYSFVAKSKPES-----------SEGGREGGGREGGRGEGSRGKPVHICGCGEARHLHLYIDGKGRRGGKPEGEDLREDGAEDGAEEDDESNSIVGVTLTEDGTVVVAAKGGNVTALRHNPSLAASTPTAQAGESALRPVAYFPLSRVVASSAPIHISNSLAVHGQGVYIVTQEEMVRLDMDTSSASLKFRWATPYGRGGLPWYTSRLGPGSGSTPSLTSCQGRDMVVITDGELRMNLIYLDAETG--------------------------GEGGCKAFVVNNYVGTDGLDADTQCTDAP-GVKGKEELAAFCNMLQP-----TFISKVCPAVFGCMAYGAAMYTLDEE------QKALKQLWARDDVSCGTSIPLISGPSDGSPSSTYCVGMLRNSSRWTLLALDTETGEERFRFPYYSEGKDRVANFFGNPYYAGVEAVAPGTLAMGSIGGLIYLTP 624
            G + P     L    WPIVHG+ +S D +    P+TAA          P   A S     + D  GV                   +   +L   +  G R++ D     +      FS+A++NPVS+IT++  +    LWTS  ++V+V++    AP TL+ +A+Y+HG ++F +HGSY+FV +   +S           S    E GGR+GG      GK            L ++ +        P G D                  +VGVT+ +DGTVVV +K G          L AS    + G   +  +A    +R   +     +SNS++  GQG++IVTQ E+ R+D + ++  L F+W+T YG    PWY  RLGPG+GSTPS++ C GR  +VITDG + MN+++ DAE G                             GCKAFVV NY+G   LD    CT AP G   +E++   C+ L P      F+S+ CP   GC + G A+Y +D        Q  + + W R D SCGTSIPLIS  S+ +    YCVG    SS+WTLL +D +TG++ F   +Y E   R  N F NP+YAGVEA+    + +GS+GG++Y++P
Sbjct:   22 GGKAPTVPITLAPEGWPIVHGTVQSKDNSDYSGPVTAA---------GPFTFATSQTINEKPDNTGV----------------AQMLLTSMLGASKNGGLRSMADQASVLLG-----FSLADSNPVSVITDKRPDGSTLLWTSTIRNVIVYKVSPEAPGTLQEVAKYDHG-YNFRFHGSYAFVGEVNGQSHFFTTDNDSLVSYTLVEEGGRKGGYSIKPLGK----------LALPVWTN--------PSGAD-----------------HLVGVTVLDDGTVVVCSKTG---------VLMASRADGKGGFVLMDTLALGDFTRTSNN----EVSNSISADGQGIFIVTQREVCRVDFNPATGRLGFKWSTIYGPEA-PWYIGRLGPGAGSTPSISECGGRKTIVITDGAMPMNVLWYDAEKGVLAGSRKVQFTEDENGNLPTQSEQSVAVDGCKAFVVQNYMGMTELDDSVFCTTAPQGGFVREQIPQICDQLLPYNSTDLFLSRACPPALGCYSPGMAVYEMDPHAMESNGQNKVSRAWTRMDKSCGTSIPLISKGSNAA----YCVGAEAGSSQWTLLGMDMDTGKDVFSHQFYEEFGAR--NIFINPFYAGVEAIGDNEIVIGSVGGIVYVSP 573          
BLAST of EWM22288.1 vs. NCBI_GenBank
Match: gi|553186849|ref|XP_005854501.1| (hypothetical protein NGA_0187600 [Nannochloropsis gaditana CCMP526] >gi|422294562|gb|EKU21862.1| hypothetical protein NGA_0187600 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 250.751 bits (639), Expect = 6.149e-76
Identity = 133/192 (69.27%), Postives = 134/192 (69.79%), Query Frame = 0
Query:  378 MVRLDMDTSSASLKFRWATPYGRGGLPWYTSRLGPGSGSTPSLTSCQGRDMVVITDGELRMNLIYLDAETG---------------------GEGGCKAFVVNNYVGTDGLDADTQCTDAPGVKGKEELAAFCNMLQPTFISKVCPAVFGCMAYGAAMYTLDEEQKALKQLWARDDVSCGTSIPLISGPSDG 548
            MVRLDMDTSSASLKFRWATPYGRGGLPWYTSRLGPGSGSTPSLTSCQGRDMVVITDGELRMNLIYLDAET                         GCKAFVVNNYVGTDGLDADTQCTDAP  +GKEELAAFCN                               KALKQLWARDDVSCGTSIPLISGPSDG
Sbjct:    1 MVRLDMDTSSASLKFRWATPYGRGGLPWYTSRLGPGSGSTPSLTSCQGRDMVVITDGELRMNLIYLDAETARTPVDFGAKVDASRLTSEQSVAVRGCKAFVVNNYVGTDGLDADTQCTDAPRRQGKEELAAFCN-------------------------------KALKQLWARDDVSCGTSIPLISGPSDG 161          
BLAST of EWM22288.1 vs. NCBI_GenBank
Match: gi|553186840|ref|XP_005854499.1| (hypothetical protein NGA_0187400 [Nannochloropsis gaditana CCMP526] >gi|422294560|gb|EKU21860.1| hypothetical protein NGA_0187400 [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 187.963 bits (476), Expect = 2.606e-52
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0
Query:  274 EGEDLREDGAEDGAEEDDESNSIVGVTLTEDGTVVVAAKGGNVTALRHNPSLAASTPTAQAGESALRPVAYFPLSRVVASSAPIHISNSLAVHGQ 368
            EGEDLREDGAEDGAEEDDESNSIVGVTLTEDGTVVVAAKGGNVTALRHNPSLAASTPTAQAGESALRPVAYFPLSRVVASSAPIHISNSLAVHGQ
Sbjct:   34 EGEDLREDGAEDGAEEDDESNSIVGVTLTEDGTVVVAAKGGNVTALRHNPSLAASTPTAQAGESALRPVAYFPLSRVVASSAPIHISNSLAVHGQ 128          
BLAST of EWM22288.1 vs. NCBI_GenBank
Match: gi|401408023|ref|XP_003883460.1| (conserved hypothetical protein [Neospora caninum Liverpool] >gi|325117877|emb|CBZ53428.1| conserved hypothetical protein [Neospora caninum Liverpool] >gi|820691672|tpe|CEL67415.1| TPA: hypothetical protein BN1204_032150 [Neospora caninum Liverpool])

HSP 1 Score: 100.523 bits (249), Expect = 3.579e-18
Identity = 136/537 (25.33%), Postives = 208/537 (38.73%), Query Frame = 0
Query:  134 DGARAVEDAIHAYMRKGGKRFSMANANPVSIITERVNEQEQRLWTSGFKHVLVFRQVLGAPTLELL---AEYEHGGFDFHYHGSYSFVAKSKPESSEGGREGGGREGGRGEGSRGKPVHICGCGEARHLHLYIDGKGRRGGK----PEGEDLREDGAEDGAEEDDESNSIVGVTLTEDGTVVVAAKGGNVTALRHNPSLAASTPTAQAGESALRPVAYFPLSRVVASSAPIHISNSLAVHGQG-VYIVTQEEMVRLDMDTSSASLKFRWATPYGRGGLPWYTS-RLGPGSGSTPSLTSCQGRDMVVITDGELRMNLIYLDAETGGEGGCKAFVVNNYVGTDGLDADTQCTDAPGVKG----------KEELAAFCNMLQ---------------PTFISKVC----PAVFGCMAYGAAMYTLDEEQKALKQLWARDDVSCGTSIPLISGPSDGSPSSTYCVGM----------LRNSSRWTLLALDTETGEERFRFPYYSEGKDRVANFFGNPYYAGVEAVAPGTLAMGSIGGLIYL 622
            DG+R +    H ++     R  +AN NP+++     +E ++ LW S +    +F+   G  +L ++   A+     F   +HG+Y+ + K +                         + +   G+  HL  Y D  G    +    PE  D+  + A +          I  + ++ DG +V A   G V  L  N            G S  +   +  L   V     + +SN++A   +G +Y+V+ + M R+D +     LK RW  PY           RLG GSGSTPS+    GR  VVITD    MN++ +DA+T   G  KA    N+   D     T    +  V G           EEL    N L+               PT IS+      P + G    G      D +  AL+  W   +VS    IP +S  S       Y +G           +R    WTL ALD  TGE +F   YY+ G   + N      YA  + V PG +  G+  G++ +
Sbjct:  276 DGSRRLS---HNFL----NRAVIAN-NPITLF---YSEDQKYLWGSSW--TTIFKVARGKSSLRIVDYVAKPVEKVFADKFHGAYALLTKEE-------------------------IFVVSSGD--HLEAYYDKPGSNSQQIMMHPEKFDITNELANEVRYPQRPEEVIRALCMSSDGHIVWATSHGRVGVLNRN----------IKGGSFRKATDWLMLGTSVGYDRDLEVSNNMACDDEGGIYVVSDKFMHRVDWN--GRKLKIRWEKPYSTSSASGTQEVRLGAGSGSTPSIMGESGRKYVVITDDADVMNVLIMDAKT---GEIKASHPINF--GDANANHTSSEQSVLVHGWRLAVVNNTPTEELKQTPNFLKMFGSPAALLLGGGEVPTRISETLTNAWPVIVGDAPKGVEQLEFDPDANALRVTWVNKEVSIPNGIPTMSATS----GLMYGIGKRGQFGSEAAPMRG--MWTLEALDWWTGESKF---YYNIGMGPMVNSI----YAATQ-VGPGEIITGTATGIVRI 741          
BLAST of EWM22288.1 vs. NCBI_GenBank
Match: gi|237837579|ref|XP_002368087.1| (hypothetical protein TGME49_232170 [Toxoplasma gondii ME49] >gi|523577626|gb|EPR64260.1| hypothetical protein TGGT1_232170 [Toxoplasma gondii GT1] >gi|527312249|gb|EPT28879.1| hypothetical protein TGME49_232170 [Toxoplasma gondii ME49] >gi|557739878|gb|ESS35758.1| putative transmembrane protein [Toxoplasma gondii VEG] >gi|672277437|gb|KFG48676.1| putative transmembrane protein [Toxoplasma gondii GAB2-2007-GAL-DOM2] >gi|672280833|gb|KFG51146.1| putative transmembrane protein [Toxoplasma gondii p89] >gi|672287318|gb|KFG55325.1| putative transmembrane protein [Toxoplasma gondii FOU] >gi|672300202|gb|KFG63766.1| putative transmembrane protein [Toxoplasma gondii RUB] >gi|672572240|gb|KFH11201.1| putative transmembrane protein [Toxoplasma gondii VAND] >gi|820699165|tpe|CEL74897.1| TPA: hypothetical protein BN1205_023580 [Toxoplasma gondii VEG] >gi|1005158606|gb|KYF46185.1| hypothetical protein TGARI_232170 [Toxoplasma gondii ARI])

HSP 1 Score: 100.138 bits (248), Expect = 4.379e-18
Identity = 133/525 (25.33%), Postives = 197/525 (37.52%), Query Frame = 0
Query:  150 GGKRFSMANANPVSI----ITERVNEQEQRLWTSGFKHVLVFRQVLGAPTLELL---AEYEHGGFDFHYHGSYSFVAKSKPESSEGGREGGGREGGRGEGSRGKPVHICGCGEARHLHLYIDGKGRRGGK----PEGEDLREDGAEDGAEEDDESNSIVGVTLTEDGTVVVAAKGGNVTALRHNPSLAASTPTAQAGESALRPVAYFPLSRVVASSAPIHISNSLAVHGQG-VYIVTQEEMVRLDMDTSSASLKFRWATPYGR---GGLPWYTSRLGPGSGSTPSLTSCQGRDMVVITDGELRMNLIYLDAETG----------GEGGCKAFVVNNYVGTDGLDADTQCTDAPGVKGKEELAAFCNMLQ---------------PTFISKVC----PAVFGCMAYGAAMYTLDEEQKALKQLWARDDVSCGTSIPLISGPSDGSPSSTYCVGMLRN--------SSRWTLLALDTETGEERFRFPYYSEGKDRVANFFGNPYYAGVEAVAPGTLAMGSIGGLIYL 622
            G KR S    N   I    IT   +E ++ LW S +    +F+   G  +L L+   A+     F   +HG+Y+ + K +                         V +   G+  HL  Y D  G    +    PE  D+  + A +          I  + ++ DG +V A   G V  L  N            G S  +   +  L   V     + +SN++A   +G +Y+V+ + M R+D +     LK RW  PY     GG      RLG GSGSTPS+   +G+  VVITD    MN++ +DA+TG          G    K       V   G        + P     EEL    N L+               PT IS+      P + G    G      + +   L+  W   +VS    IP +S  S       Y +G   +           WTL ALD  TGE +F   YY+ G   + N      YA  + V PG +  G+  G++ +
Sbjct:  278 GSKRLSHNFLNRAVIANNPITLFYSEDQKYLWGSSW--TTIFKVARGKSSLRLVDYVAKPVEKVFADKFHGAYALLTKEE-------------------------VFVVSSGD--HLEAYYDKPGSNSQQIMMHPEKFDITNELANEVRFPQRPEEVIRALCMSSDGHIVWATSHGRVGVLNRN----------IKGGSFRKAADWLMLGTSVGYDKDLEVSNNMACDDEGGIYVVSDKFMHRVDWN--GRKLKIRWEKPYATSTAGGT--QAVRLGAGSGSTPSIMGEKGKKYVVITDDADIMNVLIMDAQTGEIKAAHPINFGNSSAKHTSSEQSVLVHGWRLAV-VNNTP----TEELKQTPNFLKMFGSPAALLLGGGEVPTRISETLTNAWPVIVGDAPKGVEQLEFNPDDNTLRVTWVNTEVSIPNGIPTMSATS----GLMYGIGKRGHFGSEAAPMRGMWTLEALDWWTGESKF---YYNIGMGPMVNSI----YAATQ-VGPGEIITGTATGIVRI 742          
BLAST of EWM22288.1 vs. NCBI_GenBank
Match: gi|675127496|ref|XP_008885635.1| (hypothetical protein HHA_232170 [Hammondia hammondi] >gi|661335561|gb|KEP63698.1| hypothetical protein HHA_232170 [Hammondia hammondi])

HSP 1 Score: 98.9821 bits (245), Expect = 1.009e-17
Identity = 131/523 (25.05%), Postives = 196/523 (37.48%), Query Frame = 0
Query:  150 GGKRFSMANANPVSI----ITERVNEQEQRLWTSGFKHVLVFRQVLGAPTLELL---AEYEHGGFDFHYHGSYSFVAKSKPESSEGGREGGGREGGRGEGSRGKPVHICGCGEARHLHLYIDGKGRRGGK----PEGEDLREDGAEDGAEEDDESNSIVGVTLTEDGTVVVAAKGGNVTALRHNPSLAASTPTAQAGESALRPVAYFPLSRVVASSAPIHISNSLAVHGQG-VYIVTQEEMVRLDMDTSSASLKFRWATPYGRGGLPWYTS-RLGPGSGSTPSLTSCQGRDMVVITDGELRMNLIYLDAETG----------GEGGCKAFVVNNYVGTDGLDADTQCTDAPGVKGKEELAAFCNMLQ---------------PTFISKVC----PAVFGCMAYGAAMYTLDEEQKALKQLWARDDVSCGTSIPLISGPSDGSPSSTYCVGMLRN--------SSRWTLLALDTETGEERFRFPYYSEGKDRVANFFGNPYYAGVEAVAPGTLAMGSIGGLIYL 622
            G KR S    N   I    IT   +E ++ LW S +    +F+   G  +L L+   A+     F   +HG+Y+ + K +                         V +   G+  HL  Y D  G    +    PE  D+  + A +          I  + ++ DG +V A   G V  L  N            G S  +   +  L   V     + +SN++A   +G +Y+V+ + M R+D +     LK RW  PY         + RLG GSGSTPS+   +G+  VVITD    MN++ +DA+TG          G    K       V   G        + P     EEL    N L+               PT IS+      P + G    G      + +   L+  W   +VS    IP +S  S       Y +G   +           WTL ALD  TGE +F   YY+ G   + N      YA  + V PG +  G+  G++ +
Sbjct:  278 GSKRLSHNFLNRAVIANNPITLFYSEDQKYLWGSSW--TTIFKVARGKASLRLVDYVAKPVEKVFADKFHGAYALLTKEE-------------------------VFVVSSGD--HLEAYYDKPGSNSQQIMMHPEKFDITNELANEVRFPQRPEEVIRALCMSSDGHIVWATSHGRVGVLNRN----------IKGGSFRKAADWLMLGTSVGYDKDLEVSNNMACDDEGGIYVVSDKFMHRVDWN--GRKLKIRWEKPYATSTASGTQAVRLGAGSGSTPSIMGEKGKKYVVITDDADIMNVLIMDAQTGEIKATHPINFGNSSAKHTSSEQSVLVHGWRLAV-VNNTP----TEELKQTPNFLKMFGSPAALLLGGGEVPTRISETLTNAWPVIVGDAPKGVEQLEFNPDDNTLRVTWVNTEVSIPNGIPTMSATS----GLMYGIGKRGHFGSEAAPMRGMWTLEALDWWTGESKF---YYNIGMGPMVNSI----YAATQ-VGPGEIITGTATGIVRI 742          
The following BLAST results are available for this feature:
BLAST of EWM22288.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102762|gb|EWM22288.1|0.000e+0100.00Stress-induced protein SRP1/TIP1 [Nannochloropsis ... [more]
gi|553186837|ref|XP_005854498.1|1.043e-11398.25hypothetical protein NGA_0187300 [Nannochloropsis ... [more]
gi|585107336|gb|EWM25561.1|7.822e-9635.45hypothetical protein Naga_100359g6 [Nannochloropsi... [more]
gi|585105757|gb|EWM24361.1|1.014e-9033.07hypothetical protein Naga_100163g9 [Nannochloropsi... [more]
gi|585105756|gb|EWM24360.1|2.380e-9033.23hypothetical protein Naga_100163g9 [Nannochloropsi... [more]
gi|553186849|ref|XP_005854501.1|6.149e-7669.27hypothetical protein NGA_0187600 [Nannochloropsis ... [more]
gi|553186840|ref|XP_005854499.1|2.606e-52100.00hypothetical protein NGA_0187400 [Nannochloropsis ... [more]
gi|401408023|ref|XP_003883460.1|3.579e-1825.33conserved hypothetical protein [Neospora caninum L... [more]
gi|237837579|ref|XP_002368087.1|4.379e-1825.33hypothetical protein TGME49_232170 [Toxoplasma gon... [more]
gi|675127496|ref|XP_008885635.1|1.009e-1725.05hypothetical protein HHA_232170 [Hammondia hammond... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8413rna8413Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications