EWM22297.1, cds8377 (CDS) Nannochloropsis gaditana
Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22297.1 vs. NCBI_GenBank
Match: gi|585102779|gb|EWM22297.1| (hypothetical protein Naga_101653g2, partial [Nannochloropsis gaditana]) HSP 1 Score: 501.516 bits (1290), Expect = 1.721e-179 Identity = 247/247 (100.00%), Postives = 247/247 (100.00%), Query Frame = 0 Query: 1 MRTTMHLRRCASLLVTPPTMGPRCAGHQHRLSQRPLPYSMSSSRAWFCVHTISEDEKSGAPLQSGPLQFYFKPPVSSASSPSAKVATSPFLRQTHSTFNKSMKLINPCRLTLRPFFSGRPTSLSSTGPPSSSPPSGPAPPKPTWKELFKKYGPAFLVYWNGVWILSGITIYAALELGGVDPLPLARAVHLDALIDLEKIDPSHGNVAVAILLNEVVEIVRFPFVLATVAKGGSGHGRGERREGGKAP 247 MRTTMHLRRCASLLVTPPTMGPRCAGHQHRLSQRPLPYSMSSSRAWFCVHTISEDEKSGAPLQSGPLQFYFKPPVSSASSPSAKVATSPFLRQTHSTFNKSMKLINPCRLTLRPFFSGRPTSLSSTGPPSSSPPSGPAPPKPTWKELFKKYGPAFLVYWNGVWILSGITIYAALELGGVDPLPLARAVHLDALIDLEKIDPSHGNVAVAILLNEVVEIVRFPFVLATVAKGGSGHGRGERREGGKAP Sbjct: 1 MRTTMHLRRCASLLVTPPTMGPRCAGHQHRLSQRPLPYSMSSSRAWFCVHTISEDEKSGAPLQSGPLQFYFKPPVSSASSPSAKVATSPFLRQTHSTFNKSMKLINPCRLTLRPFFSGRPTSLSSTGPPSSSPPSGPAPPKPTWKELFKKYGPAFLVYWNGVWILSGITIYAALELGGVDPLPLARAVHLDALIDLEKIDPSHGNVAVAILLNEVVEIVRFPFVLATVAKGGSGHGRGERREGGKAP 247
BLAST of EWM22297.1 vs. NCBI_GenBank
Match: gi|635371663|emb|CCI40165.1| (unnamed protein product [Albugo candida]) HSP 1 Score: 93.5893 bits (231), Expect = 2.761e-20 Identity = 43/84 (51.19%), Postives = 58/84 (69.05%), Query Frame = 0 Query: 147 LFKKYGPAFLVYWNGVWILSGITIYAALE---LGGVDPLPLARAVHLDALIDLEKIDPSHGNVAVAILLNEVVEIVRFPFVLAT 227 L K+YG F+ YW G + +SG IY A+E L G D + L + + LD +D+E ++PSHGN+A A LLNE+VE +RFPFVLAT Sbjct: 53 LIKEYGLPFVAYWTGWYAISGAGIYFAIENGWLAGTDAIQLIQTIGLDRYVDIENLNPSHGNIAFAFLLNEIVETIRFPFVLAT 136
BLAST of EWM22297.1 vs. NCBI_GenBank
Match: gi|1173952634|gb|OQS00267.1| (hypothetical protein THRCLA_06079 [Thraustotheca clavata]) HSP 1 Score: 90.1225 bits (222), Expect = 9.113e-19 Identity = 55/160 (34.38%), Postives = 85/160 (53.12%), Query Frame = 0 Query: 75 VSSASSPSAKVATSPFLRQTHSTFNKSMKLINPCRLTLRPFFSGRPTSLSSTGPPSSSPPS---GPAPPKP-TWKELFKKYGPAFLVYWNGVWILSGITIYAALE---LGGVDPLPLARAVHLDALIDLEKIDPSHGNVAVAILLNEVVEIVRFPFVLAT 227 +S + S + A P LR H N S + I+P T+ F + R + L + + + KP + + + G FLV+W ++ SG TIY L GG D + L R + LD+ IDL+ ++P +GN+A+A++LNE++E VRFPF LAT Sbjct: 2 LSMLRTTSVRTAVRPALRMLHP--NSSFRCISPSMSTVHFFSTKRESELEAENAKLKAQIAELEKKLENKPGKFMAMIQANGLPFLVWWTTLYGASGFTIYYGLSRGWFGGSDAVDLIRGLGLDSYIDLDSLNPEYGNIAIAVVLNEILETVRFPFCLAT 159
BLAST of EWM22297.1 vs. NCBI_GenBank
Match: gi|1173926348|gb|OQR80617.1| (hypothetical protein ACHHYP_17415 [Achlya hypogyna]) HSP 1 Score: 82.4185 bits (202), Expect = 7.932e-16 Identity = 38/79 (48.10%), Postives = 53/79 (67.09%), Query Frame = 0 Query: 152 GPAFLVYWNGVWILSGITIYAALE---LGGVDPLPLARAVHLDALIDLEKIDPSHGNVAVAILLNEVVEIVRFPFVLAT 227 G FLV+W ++ SG TIY L GG D + L R + LD +DLE ++P +GN+A+A++LNE++E VRFPF LAT Sbjct: 80 GLPFLVWWTTLYGASGFTIYYGLSSGWFGGSDAVDLIRGLGLDKYVDLESLNPEYGNIAIAVVLNEILETVRFPFCLAT 158
BLAST of EWM22297.1 vs. NCBI_GenBank
Match: gi|813109019|ref|XP_012194438.1| (hypothetical protein SPRG_00832 [Saprolegnia parasitica CBS 223.65] >gi|641541008|gb|KDO34771.1| hypothetical protein SPRG_00832 [Saprolegnia parasitica CBS 223.65]) HSP 1 Score: 81.6481 bits (200), Expect = 1.665e-15 Identity = 37/79 (46.84%), Postives = 54/79 (68.35%), Query Frame = 0 Query: 152 GPAFLVYWNGVWILSGITIYAALE---LGGVDPLPLARAVHLDALIDLEKIDPSHGNVAVAILLNEVVEIVRFPFVLAT 227 G FLV+W ++ +G TIY L GG D + L R + LD+ IDL+ ++P +GN+A+A++LNE++E VRFPF LAT Sbjct: 83 GLPFLVWWTTLYGATGFTIYYGLSRGWFGGSDAVDLIRGLGLDSYIDLDSLNPEYGNIAIAVVLNEILETVRFPFCLAT 161
BLAST of EWM22297.1 vs. NCBI_GenBank
Match: gi|669171605|ref|XP_008621151.1| (hypothetical protein SDRG_16711 [Saprolegnia diclina VS20] >gi|530727181|gb|EQC25423.1| hypothetical protein SDRG_16711 [Saprolegnia diclina VS20]) HSP 1 Score: 81.6481 bits (200), Expect = 1.847e-15 Identity = 37/79 (46.84%), Postives = 54/79 (68.35%), Query Frame = 0 Query: 152 GPAFLVYWNGVWILSGITIYAALE---LGGVDPLPLARAVHLDALIDLEKIDPSHGNVAVAILLNEVVEIVRFPFVLAT 227 G FLV+W ++ +G TIY L GG D + L R + LD+ IDL+ ++P +GN+A+A++LNE++E VRFPF LAT Sbjct: 83 GLPFLVWWTTLYGATGFTIYYGLSRGWFGGSDAVDLIRGLGLDSYIDLDSLNPEYGNIAIAVVLNEILETVRFPFCLAT 161
BLAST of EWM22297.1 vs. NCBI_GenBank
Match: gi|585102775|gb|EWM22294.1| (hypothetical protein Naga_100933g1, partial [Nannochloropsis gaditana]) HSP 1 Score: 80.4925 bits (197), Expect = 1.960e-15 Identity = 41/91 (45.05%), Postives = 56/91 (61.54%), Query Frame = 0 Query: 142 PTWKELFKKYGPAFLVYWNGVWILSGITIYAALEL----GGVDPLPLARAVHLDALIDLEKIDPSHGNVAVAILLNEVVEIVRFPFVLATV 228 P+W EL + +GP FLV+W +W+L ++ E VD L LARA +D ++DL + PS GN+ VAI NEV+E+VRFP L TV Sbjct: 32 PSWGELVRIHGPPFLVWWGTLWVLGAGGLFLGFEHHLFGADVDALTLARAWGVDKVVDLSGVPPSLGNMGVAIACNEVLEVVRFPLALLTV 122
BLAST of EWM22297.1 vs. NCBI_GenBank
Match: gi|669139286|ref|XP_008605211.1| (hypothetical protein SDRG_01464 [Saprolegnia diclina VS20] >gi|530743255|gb|EQC41497.1| hypothetical protein SDRG_01464 [Saprolegnia diclina VS20]) HSP 1 Score: 80.8777 bits (198), Expect = 2.104e-15 Identity = 37/79 (46.84%), Postives = 54/79 (68.35%), Query Frame = 0 Query: 152 GPAFLVYWNGVWILSGITIYAALE---LGGVDPLPLARAVHLDALIDLEKIDPSHGNVAVAILLNEVVEIVRFPFVLAT 227 G FLV+W ++ +G TIY L GG D + L R + LD+ IDL+ ++P +GN+A+A++LNE++E VRFPF LAT Sbjct: 68 GLPFLVWWTTLYGATGFTIYYGLSRGWFGGSDAVDLIRGLGLDSYIDLDSLNPEYGNIAIAVVLNEILETVRFPFCLAT 146
BLAST of EWM22297.1 vs. NCBI_GenBank
Match: gi|301119375|ref|XP_002907415.1| (conserved hypothetical protein [Phytophthora infestans T30-4] >gi|262105927|gb|EEY63979.1| conserved hypothetical protein [Phytophthora infestans T30-4]) HSP 1 Score: 81.2629 bits (199), Expect = 5.204e-15 Identity = 34/84 (40.48%), Postives = 56/84 (66.67%), Query Frame = 0 Query: 148 FKKYGPAFLVYWNGVWILSGITIYAALELG---GVDPLPLARAVHLDALIDLEKIDPSHGNVAVAILLNEVVEIVRFPFVLATV 228 ++YG FL +W +++ SG++IY AL+ G G + + LD ID ++DP++GN+A+A+++NE +EIVRFP LAT+ Sbjct: 118 LQQYGLPFLAWWTSLYLASGVSIYVALDTGLVSGASIIDFIMQIGLDKFIDPARLDPTYGNIAIAVIVNEFLEIVRFPITLATL 201
BLAST of EWM22297.1 vs. NCBI_GenBank
Match: gi|1072222731|gb|OEU07490.1| (hypothetical protein FRACYDRAFT_250908 [Fragilariopsis cylindrus CCMP1102]) HSP 1 Score: 79.337 bits (194), Expect = 7.096e-15 Identity = 36/81 (44.44%), Postives = 54/81 (66.67%), Query Frame = 0 Query: 148 FKKYGPAFLVYWNGVWILSGITIYAALELGGVDPLPLARAVH-LDALIDLEKIDPSHGNVAVAILLNEVVEIVRFPFVLAT 227 FK+ G FL +W GVW+++G+ IY+ +EL G+D L + + + ID K+DP GNV A+ +NE++E +RFPFVL T Sbjct: 60 FKQLGMPFLAWWTGVWVVTGVGIYSGMELFGIDVLGMLQTTLPSNNYIDFSKVDPKTGNVMTAVAINELIEPIRFPFVLLT 140 The following BLAST results are available for this feature:
BLAST of EWM22297.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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