EWM22326.1, cds8349 (CDS) Nannochloropsis gaditana

Overview
NameEWM22326.1
Unique Namecds8349
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:522537..522562 +
Alignment locationKK037248.1:522836..522945 +
Alignment locationKK037248.1:523100..523187 +
Alignment locationKK037248.1:523444..523922 +
Alignment locationKK037248.1:524087..524280 +
Alignment locationKK037248.1:524614..524874 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22326.1
ProductDNA-binding SAP
Orig transcript idgnl|cribi|Naga_100118g13.2753.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:522537..522562 +
KK037248.1supercontigKK037248.1:522836..522945 +
KK037248.1supercontigKK037248.1:523100..523187 +
KK037248.1supercontigKK037248.1:523444..523922 +
KK037248.1supercontigKK037248.1:524087..524280 +
KK037248.1supercontigKK037248.1:524614..524874 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR019380Casein_kinase_sb_PP28
IPR003034SAP_dom
Homology
BLAST of EWM22326.1 vs. NCBI_GenBank
Match: gi|585102823|gb|EWM22326.1| (DNA-binding SAP [Nannochloropsis gaditana])

HSP 1 Score: 762.681 bits (1968), Expect = 0.000e+0
Identity = 385/385 (100.00%), Postives = 385/385 (100.00%), Query Frame = 0
Query:    1 MQNMHTRLRFLFTSTFVSPVTRAGGPRPPPDNRGDAPSSKSSSTTRGGGSGREGGAPAKQQINKGKFKRFSRSHNYVTSEEDMERRDRFEDWKQRKKGGDDDDVAEGESGEEEGSSEGEGGEGKGGERGPEDGAGGMAEAFKKKVQVRDLPPAESGSEEEDYNGPSKGGQQGREGGEGMTRKEREEAAREKAREEYLRRYREGETEEAKKDLARLAEVRARREEAARKKEEEVKAREALNERLRLGAEAAEAGAGEGGKAIEALDPREIKKMSGTKLKECLKERGLSTQGQKKELVDRLCGGLLKKCLNKGRGVRRGGMREWGLVRTSMFCGARKGLRTFAMPCVLSRSLRHRPILSRSPALHVPVWLQESLGHFRFKKETSGRQ 385
            MQNMHTRLRFLFTSTFVSPVTRAGGPRPPPDNRGDAPSSKSSSTTRGGGSGREGGAPAKQQINKGKFKRFSRSHNYVTSEEDMERRDRFEDWKQRKKGGDDDDVAEGESGEEEGSSEGEGGEGKGGERGPEDGAGGMAEAFKKKVQVRDLPPAESGSEEEDYNGPSKGGQQGREGGEGMTRKEREEAAREKAREEYLRRYREGETEEAKKDLARLAEVRARREEAARKKEEEVKAREALNERLRLGAEAAEAGAGEGGKAIEALDPREIKKMSGTKLKECLKERGLSTQGQKKELVDRLCGGLLKKCLNKGRGVRRGGMREWGLVRTSMFCGARKGLRTFAMPCVLSRSLRHRPILSRSPALHVPVWLQESLGHFRFKKETSGRQ
Sbjct:    1 MQNMHTRLRFLFTSTFVSPVTRAGGPRPPPDNRGDAPSSKSSSTTRGGGSGREGGAPAKQQINKGKFKRFSRSHNYVTSEEDMERRDRFEDWKQRKKGGDDDDVAEGESGEEEGSSEGEGGEGKGGERGPEDGAGGMAEAFKKKVQVRDLPPAESGSEEEDYNGPSKGGQQGREGGEGMTRKEREEAAREKAREEYLRRYREGETEEAKKDLARLAEVRARREEAARKKEEEVKAREALNERLRLGAEAAEAGAGEGGKAIEALDPREIKKMSGTKLKECLKERGLSTQGQKKELVDRLCGGLLKKCLNKGRGVRRGGMREWGLVRTSMFCGARKGLRTFAMPCVLSRSLRHRPILSRSPALHVPVWLQESLGHFRFKKETSGRQ 385          
BLAST of EWM22326.1 vs. NCBI_GenBank
Match: gi|325190346|emb|CCA24820.1| (conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 100.138 bits (248), Expect = 1.069e-20
Identity = 89/235 (37.87%), Postives = 120/235 (51.06%), Query Frame = 0
Query:   76 YVTSEEDMERRDRFEDWKQRKKGGDDDDVAEGE-SGEEEGSSEGEGGEGKGGER---------GPEDGAGGMAEAFKKKVQVRDLPPAESGSEEEDYNGPSKGGQQGREGGEGMTRKEREEAAREKAREEYLRRYREGETEEAKKDLARLAEVRARREEAARKKEEEVKAREALNERLRLGAEAAEAGAGEGGKAIEALDPREIKKMSGTKLKECLKERGLSTQGQKKELVDRLC 300
            +V+SEE++  R+  E  +  K     DD +E E +G EEG+   +  +G   ER               G + E  KKK  V  +   E+ + +       K           +TRKERE    E+A  EY+RR+  GET EAKKDLARLAEVR RRE A  +++E  +A EAL  +L +          +  +  E LD R IK +    LK+ LKERGLSTQGQKK+LV RL 
Sbjct:   24 FVSSEEELALRNTAE--RGTKDQDSSDDGSEDELNGIEEGNEIDDDEDGVTFEREALKKSLFSVSSSMDGPIFEKTKKKTGVAAIIQIENPNLKSKQTTSIKAKDMDASFEHKLTRKEREAIDHERAASEYMRRHLAGETTEAKKDLARLAEVRRRREVAEIRRKETEEAAEALRAKLVI---------NDTNETEEVLDARAIKALKPAVLKDKLKERGLSTQGQKKDLVQRLI 247          
BLAST of EWM22326.1 vs. NCBI_GenBank
Match: gi|635360436|emb|CCI50250.1| (unnamed protein product [Albugo candida])

HSP 1 Score: 98.2117 bits (243), Expect = 6.066e-20
Identity = 61/122 (50.00%), Postives = 78/122 (63.93%), Query Frame = 0
Query:  179 MTRKEREEAAREKAREEYLRRYREGETEEAKKDLARLAEVRARREEAARKKEEEVKAREALNERLRLGAEAAEAGAGEGGKAIEALDPREIKKMSGTKLKECLKERGLSTQGQKKELVDRLC 300
            +TRKERE   +E+A  EY+RR+  GET EAKKDLARLAEVR RRE A  +++E  +A  A+  +L +          +  +  E LD R IK +    LK+ LKERGLSTQGQKK+LV RL 
Sbjct:  133 LTRKEREAIDKERAASEYMRRHLAGETTEAKKDLARLAEVRKRREVAELRRKETEEAAAAMQAKLTV---------NDTDETEEVLDARSIKALKPAILKDKLKERGLSTQGQKKDLVQRLI 245          
BLAST of EWM22326.1 vs. NCBI_GenBank
Match: gi|325191833|emb|CCA26306.1| (conserved hypothetical protein [Albugo laibachii Nc14])

HSP 1 Score: 90.5077 bits (223), Expect = 2.644e-17
Identity = 88/236 (37.29%), Postives = 113/236 (47.88%), Query Frame = 0
Query:   76 YVTSEEDMERRDRFEDWKQRKKGGDDDDVAEGE-SGEEEGSSEGEGGEGKGGER---------GPEDGAGGMAEAFKKKVQVRDLPPAESGSEEEDYNGPSKGGQQGREGGEGMTRKEREEAAREKAREEYLRRYREGETEEAKKDLARLAEVRARREEA-ARKKEEEVKAREALNERLRLGAEAAEAGAGEGGKAIEALDPREIKKMSGTKLKECLKERGLSTQGQKKELVDRLC 300
            +V+SEE++  R+  E  +  K     DD +E E +G EEG+   +  +G   ER               G + E  KKK  V  +   E+ + +       K           +TRKERE    E+A  EY+RR+  GET EAKKDLARLAEVR RRE A  R+KE E                          +A E LD R IK +    LK+ LKERGLSTQGQKK+LV RL 
Sbjct:   24 FVSSEEELALRNTAE--RGTKDQDSSDDGSEDELNGIEEGNEIDDDEDGVTFEREALKKSLFSVSSSMDGPIFEKTKKKTGVAAIIQIENPNLKSKQTTSIKAKDMDASFEHKLTRKEREAIDHERAASEYMRRHLAGETTEAKKDLARLAEVRRRREVAEIRRKETE--------------------------EAEEVLDARAIKALKPAVLKDKLKERGLSTQGQKKDLVQRLI 231          
BLAST of EWM22326.1 vs. NCBI_GenBank
Match: gi|953503656|emb|CEG35666.1| (28 kda heat-and acid-stable phospho [Plasmopara halstedii])

HSP 1 Score: 82.4185 bits (202), Expect = 1.641e-14
Identity = 79/229 (34.50%), Postives = 111/229 (48.47%), Query Frame = 0
Query:   73 SHNYVTSEEDMERRDRFEDWKQRKKGGDDDDVAEGESGEEEGSSEGEGGEGKGGERGPEDGAGGMAEAFKKKVQVRDLPPAESGSEEEDYNGPSKGGQQGREGG-EGMTRKEREEAAREKAREEYLRRYREGETEEAKKDLARLAEVRARREEAARKKEEEVKAREALNERLRLGAEAAEAGAGEGGKAIEALDPREIKKMSGTKLKECLKERGLSTQGQKKELVDRLC 300
            +  +VTS E+M  RD  E+ K RK  GDD      ++    G S                  G + +  KKKV    +   ++ + ++  N   K          + ++R+ERE   +E+A   YL+++  GET+EAKKDLARLAEV+ RREEA    E+  K  E          ++ +    +     E LD R IK +    LKE LKER LSTQGQKKEL+ RL 
Sbjct:   27 TRKFVTSLEEMTLRDEQEEQK-RKTRGDDMAFERVQTNSLFGFSNS--------------ADGPVLQQEKKKVGFAAVAKTQNPNAKKTANKVMKAKDMDENAAPQQLSRREREAIEKERAAAYYLKKHLAGETDEAKKDLARLAEVKRRREEA----EQRKKEEEEAAAEREKSKKSVQVKDDD-----EPLDARAIKALKPAVLKEKLKERDLSTQGQKKELIQRLI 231          
BLAST of EWM22326.1 vs. NCBI_GenBank
Match: gi|970656940|gb|KUF94890.1| (Endoplasmic reticulum oxidoreductin-2 [Phytophthora nicotianae])

HSP 1 Score: 80.1073 bits (196), Expect = 8.879e-14
Identity = 58/129 (44.96%), Postives = 75/129 (58.14%), Query Frame = 0
Query:  172 GREGGEGMTRKEREEAAREKAREEYLRRYREGETEEAKKDLARLAEVRARREEAARKKEEEVKAREALNERLRLGAEAAEAGAGEGGKAIEALDPREIKKMSGTKLKECLKERGLSTQGQKKELVDRLC 300
            G    + ++R+ERE   +E+A   Y++++  GETEEAKKDLARLAEV+ RREEA    E+  K  EA         +  +    +     E LD R IK +    LKE LKER LSTQGQKKEL+ RL 
Sbjct:  101 GNAAPQQLSRREREAIEKERATAYYMKKHLAGETEEAKKDLARLAEVKRRREEA----EQRKKEEEAAAAEREKAKKKVQVKDDD-----EPLDARAIKALKPAVLKEKLKERDLSTQGQKKELIQRLI 220          
BLAST of EWM22326.1 vs. NCBI_GenBank
Match: gi|566022025|gb|ETI44936.1| (hypothetical protein F443_10381 [Phytophthora parasitica P1569] >gi|568047710|gb|ETM44783.1| hypothetical protein L914_10027 [Phytophthora parasitica])

HSP 1 Score: 79.7221 bits (195), Expect = 2.276e-13
Identity = 58/129 (44.96%), Postives = 75/129 (58.14%), Query Frame = 0
Query:  172 GREGGEGMTRKEREEAAREKAREEYLRRYREGETEEAKKDLARLAEVRARREEAARKKEEEVKAREALNERLRLGAEAAEAGAGEGGKAIEALDPREIKKMSGTKLKECLKERGLSTQGQKKELVDRLC 300
            G    + ++R+ERE   +E+A   Y++++  GETEEAKKDLARLAEV+ RREEA    E+  K  EA         +  +    +     E LD R IK +    LKE LKER LSTQGQKKEL+ RL 
Sbjct:  130 GNAAPQQLSRREREAIEKERATAYYMKKHLAGETEEAKKDLARLAEVKRRREEA----EQRKKEEEAAAAEREKAKKKVQVKDDD-----EPLDARAIKALKPAVLKEKLKERDLSTQGQKKELIQRLI 249          
BLAST of EWM22326.1 vs. NCBI_GenBank
Match: gi|567959366|gb|ETK84939.1| (hypothetical protein, variant [Phytophthora parasitica] >gi|567988073|gb|ETL38357.1| hypothetical protein, variant [Phytophthora parasitica])

HSP 1 Score: 79.7221 bits (195), Expect = 2.298e-13
Identity = 58/129 (44.96%), Postives = 75/129 (58.14%), Query Frame = 0
Query:  172 GREGGEGMTRKEREEAAREKAREEYLRRYREGETEEAKKDLARLAEVRARREEAARKKEEEVKAREALNERLRLGAEAAEAGAGEGGKAIEALDPREIKKMSGTKLKECLKERGLSTQGQKKELVDRLC 300
            G    + ++R+ERE   +E+A   Y++++  GETEEAKKDLARLAEV+ RREEA    E+  K  EA         +  +    +     E LD R IK +    LKE LKER LSTQGQKKEL+ RL 
Sbjct:  130 GNAAPQQLSRREREAIEKERATAYYMKKHLAGETEEAKKDLARLAEVKRRREEA----EQRKKEEEAAAAEREKAKKKVQVKDDD-----EPLDARAIKALKPAVLKEKLKERDLSTQGQKKELIQRLI 249          
BLAST of EWM22326.1 vs. NCBI_GenBank
Match: gi|675169169|ref|XP_008893469.1| (hypothetical protein, variant [Phytophthora parasitica INRA-310] >gi|568017279|gb|ETL91456.1| hypothetical protein, variant [Phytophthora parasitica] >gi|568107076|gb|ETN21706.1| hypothetical protein, variant [Phytophthora parasitica INRA-310] >gi|570325633|gb|ETO73581.1| hypothetical protein F444_10493 [Phytophthora parasitica P1976] >gi|570949508|gb|ETP14765.1| hypothetical protein, variant [Phytophthora parasitica CJ01A1] >gi|570982880|gb|ETP42835.1| hypothetical protein, variant [Phytophthora parasitica P10297] >gi|970645770|gb|KUF86143.1| 28 kDa heat- and acid-stable phosphoprotein [Phytophthora nicotianae])

HSP 1 Score: 79.7221 bits (195), Expect = 2.459e-13
Identity = 58/129 (44.96%), Postives = 75/129 (58.14%), Query Frame = 0
Query:  172 GREGGEGMTRKEREEAAREKAREEYLRRYREGETEEAKKDLARLAEVRARREEAARKKEEEVKAREALNERLRLGAEAAEAGAGEGGKAIEALDPREIKKMSGTKLKECLKERGLSTQGQKKELVDRLC 300
            G    + ++R+ERE   +E+A   Y++++  GETEEAKKDLARLAEV+ RREEA    E+  K  EA         +  +    +     E LD R IK +    LKE LKER LSTQGQKKEL+ RL 
Sbjct:  130 GNAAPQQLSRREREAIEKERATAYYMKKHLAGETEEAKKDLARLAEVKRRREEA----EQRKKEEEAAAAEREKAKKKVQVKDDD-----EPLDARAIKALKPAVLKEKLKERDLSTQGQKKELIQRLI 249          
BLAST of EWM22326.1 vs. NCBI_GenBank
Match: gi|1173927471|gb|OQR81414.1| (hypothetical protein THRCLA_11754 [Thraustotheca clavata])

HSP 1 Score: 78.5666 bits (192), Expect = 3.912e-13
Identity = 81/237 (34.18%), Postives = 113/237 (47.68%), Query Frame = 0
Query:   76 YVTSEEDMERRDRFEDWKQRKKGGDDDDVAEGESGEEEGSSEGEGGEGKGGERG--------PEDGAGGMAEAFKKKVQVRDLPPAESGSEE----EDYNGPSKGGQQGREGGEGMTRKEREEAAREKAREEYLRRYREGETEEAKKDLARLAEVRARREEAARKKEEEVKAREALNERLRLGAEAAEAGAGEGGKAIEALDPREIKKMSGTKLKECLKERGLSTQGQKKELVDRLC 300
            +VTS E+M+ R+  E+ KQ K+    D          EG+S+ E  EG   E          PE       +     + V++ P  ++ S +    +D    ++  Q        +TR+ERE   +E     Y++R+  GET EAKKDLARL EVR RRE+AAR+K+EE  A     ++         A         E LD R IK +    LK+ LKERGL  QGQK EL+ RL 
Sbjct:   27 FVTSLEEMQARNTVEELKQEKRRARRD----------EGNSDDEDEEGSDLEVVFEEESKPEPEQVRVAKPKGISSLINVQN-PNLQNASNKVMKAKDMTASAEPQQ--------LTRREREAIEKEAKAAAYMKRHLAGETAEAKKDLARLEEVRKRREDAARRKKEEEDAEAEKQKK---------ASKSTKIDDDEILDARAIKALKPNVLKDKLKERGLPIQGQKAELIQRLI 235          
The following BLAST results are available for this feature:
BLAST of EWM22326.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102823|gb|EWM22326.1|0.000e+0100.00DNA-binding SAP [Nannochloropsis gaditana][more]
gi|325190346|emb|CCA24820.1|1.069e-2037.87conserved hypothetical protein [Albugo laibachii N... [more]
gi|635360436|emb|CCI50250.1|6.066e-2050.00unnamed protein product [Albugo candida][more]
gi|325191833|emb|CCA26306.1|2.644e-1737.29conserved hypothetical protein [Albugo laibachii N... [more]
gi|953503656|emb|CEG35666.1|1.641e-1434.5028 kda heat-and acid-stable phospho [Plasmopara ha... [more]
gi|970656940|gb|KUF94890.1|8.879e-1444.96Endoplasmic reticulum oxidoreductin-2 [Phytophthor... [more]
gi|566022025|gb|ETI44936.1|2.276e-1344.96hypothetical protein F443_10381 [Phytophthora para... [more]
gi|567959366|gb|ETK84939.1|2.298e-1344.96hypothetical protein, variant [Phytophthora parasi... [more]
gi|675169169|ref|XP_008893469.1|2.459e-1344.96hypothetical protein, variant [Phytophthora parasi... [more]
gi|1173927471|gb|OQR81414.1|3.912e-1334.18hypothetical protein THRCLA_11754 [Thraustotheca c... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8376rna8376Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications