EWM22315.1, cds8348 (CDS) Nannochloropsis gaditana

Overview
NameEWM22315.1
Unique Namecds8348
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:518886..518916 +
Alignment locationKK037248.1:519039..519162 +
Alignment locationKK037248.1:519343..519631 +
Alignment locationKK037248.1:519813..521750 +

Link to JBrowse

Properties
Property NameValue
Protein idEWM22315.1
Productalanyl-trna synthetase
Orig transcript idgnl|cribi|Naga_100118g12.2742.mrna
GeneALARS
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:518886..518916 +
KK037248.1supercontigKK037248.1:519039..519162 +
KK037248.1supercontigKK037248.1:519343..519631 +
KK037248.1supercontigKK037248.1:519813..521750 +
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0003723RNA binding
GO:0003676nucleic acid binding
GO:0005524ATP binding
GO:0004813alanine-tRNA ligase activity
GO:0000166nucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
GO:0006139nucleobase-containing compound metabolic process
GO:0006419alanyl-tRNA aminoacylation
Vocabulary: Cellular Component
TermDefinition
GO:0005739mitochondrion
GO:0005737cytoplasm
Vocabulary: INTERPRO
TermDefinition
IPR018162Ala-tRNA-ligase_IIc_anticod-bd
IPR023033Ala_tRNA_ligase_euk/bac
IPR018165Ala-tRNA-synth_IIc_core
IPR018164Ala-tRNA-synth_IIc_N
IPR002318Ala-tRNA-lgiase_IIc
Homology
BLAST of EWM22315.1 vs. NCBI_GenBank
Match: gi|585102812|gb|EWM22315.1| (alanyl-trna synthetase [Nannochloropsis gaditana])

HSP 1 Score: 1606.27 bits (4158), Expect = 0.000e+0
Identity = 793/793 (100.00%), Postives = 793/793 (100.00%), Query Frame = 0
Query:    1 MTCYKGVWPSERRYAVVLMLAITLQSCRGFMSPLRGRHSKVLGFATNSLPKRCPTKYPLPSLHRDGRIPFATSSSDQEWPANRVRQTFMDYFVQKHGHTFFPSSPVVPLADPTLLFANAGMNQYKPIFLGQADPNSPLAKLERAVNSQKCIRAGGKHNDLEDVGMDTYHHTFFEMLGSWSFGDYFKEEAIRWAWELLTDVYGLPPDRLYVTYFGGDAAMGVPPDDEARDLWLRFLPPERVLPFGKKENFWEMGETGPCGPCSEIHFDRVGGRDAAALVNQDDPDVLEIWNLVFIQFNREEEGGSLRLLPAKHVDTGMGLERLVSIMQDKRSNYDTDVFAPLFAAIRAQVQGPAYAGKLGSDDVELRDTAYRVVADHVRTLAFAIADGALPSNEGRGYVLRRVLRRAVRYGKQILGGPPGFFAKLVPAVVDAFGDFYPELREKEAWIVEVIADEEKGFGEMLERGIKYFGEEVVGGLRKQGGSVVSAEQAFFLYDTLGFPVDLTRLMAVEEGFDVDLEGFGKEMEKAKQRSKAAALRARAGAGREGERPLLLQVDETAWLQGKGVEHTDDAEKYGWEGGQEGRVLALFTHDGFVDEVRGSEEDAPLIGVILDRTAFYAEAGGAGGRHGEAGGDGGRGGGGGGGCASLRGLRLAQWEAANTDGIGQVAGRAEGAGAGRLCPAAEGGSQPHNDARLELCFGESAGPSCDAKGVPGERGEAPFRFQPRQGFDPVGDGTGGDNRPADDRGEFARPQPGCAVGGCPDHQWASRRVRRSIPGPCPRPGGGRGGGHAAGRP 793
            MTCYKGVWPSERRYAVVLMLAITLQSCRGFMSPLRGRHSKVLGFATNSLPKRCPTKYPLPSLHRDGRIPFATSSSDQEWPANRVRQTFMDYFVQKHGHTFFPSSPVVPLADPTLLFANAGMNQYKPIFLGQADPNSPLAKLERAVNSQKCIRAGGKHNDLEDVGMDTYHHTFFEMLGSWSFGDYFKEEAIRWAWELLTDVYGLPPDRLYVTYFGGDAAMGVPPDDEARDLWLRFLPPERVLPFGKKENFWEMGETGPCGPCSEIHFDRVGGRDAAALVNQDDPDVLEIWNLVFIQFNREEEGGSLRLLPAKHVDTGMGLERLVSIMQDKRSNYDTDVFAPLFAAIRAQVQGPAYAGKLGSDDVELRDTAYRVVADHVRTLAFAIADGALPSNEGRGYVLRRVLRRAVRYGKQILGGPPGFFAKLVPAVVDAFGDFYPELREKEAWIVEVIADEEKGFGEMLERGIKYFGEEVVGGLRKQGGSVVSAEQAFFLYDTLGFPVDLTRLMAVEEGFDVDLEGFGKEMEKAKQRSKAAALRARAGAGREGERPLLLQVDETAWLQGKGVEHTDDAEKYGWEGGQEGRVLALFTHDGFVDEVRGSEEDAPLIGVILDRTAFYAEAGGAGGRHGEAGGDGGRGGGGGGGCASLRGLRLAQWEAANTDGIGQVAGRAEGAGAGRLCPAAEGGSQPHNDARLELCFGESAGPSCDAKGVPGERGEAPFRFQPRQGFDPVGDGTGGDNRPADDRGEFARPQPGCAVGGCPDHQWASRRVRRSIPGPCPRPGGGRGGGHAAGRP
Sbjct:    1 MTCYKGVWPSERRYAVVLMLAITLQSCRGFMSPLRGRHSKVLGFATNSLPKRCPTKYPLPSLHRDGRIPFATSSSDQEWPANRVRQTFMDYFVQKHGHTFFPSSPVVPLADPTLLFANAGMNQYKPIFLGQADPNSPLAKLERAVNSQKCIRAGGKHNDLEDVGMDTYHHTFFEMLGSWSFGDYFKEEAIRWAWELLTDVYGLPPDRLYVTYFGGDAAMGVPPDDEARDLWLRFLPPERVLPFGKKENFWEMGETGPCGPCSEIHFDRVGGRDAAALVNQDDPDVLEIWNLVFIQFNREEEGGSLRLLPAKHVDTGMGLERLVSIMQDKRSNYDTDVFAPLFAAIRAQVQGPAYAGKLGSDDVELRDTAYRVVADHVRTLAFAIADGALPSNEGRGYVLRRVLRRAVRYGKQILGGPPGFFAKLVPAVVDAFGDFYPELREKEAWIVEVIADEEKGFGEMLERGIKYFGEEVVGGLRKQGGSVVSAEQAFFLYDTLGFPVDLTRLMAVEEGFDVDLEGFGKEMEKAKQRSKAAALRARAGAGREGERPLLLQVDETAWLQGKGVEHTDDAEKYGWEGGQEGRVLALFTHDGFVDEVRGSEEDAPLIGVILDRTAFYAEAGGAGGRHGEAGGDGGRGGGGGGGCASLRGLRLAQWEAANTDGIGQVAGRAEGAGAGRLCPAAEGGSQPHNDARLELCFGESAGPSCDAKGVPGERGEAPFRFQPRQGFDPVGDGTGGDNRPADDRGEFARPQPGCAVGGCPDHQWASRRVRRSIPGPCPRPGGGRGGGHAAGRP 793          
BLAST of EWM22315.1 vs. NCBI_GenBank
Match: gi|922853709|gb|KOO22301.1| (alanyl-tRNA synthetase [Chrysochromulina sp. CCMP291])

HSP 1 Score: 726.472 bits (1874), Expect = 0.000e+0
Identity = 354/546 (64.84%), Postives = 418/546 (76.56%), Query Frame = 0
Query:   79 WPANRVRQTFMDYFVQKHGHTFFPSSPVVPLADPTLLFANAGMNQYKPIFLGQADPNSPLAKLERAVNSQKCIRAGGKHNDLEDVGMDTYHHTFFEMLGSWSFGDYFKEEAIRWAWELLTDVYGLPPDRLYVTYFGGDAAMGVPPDDEARDLWLRFLPPERVLPFGKKENFWEMGETGPCGPCSEIHFDRVGGRDAAALVNQDDPDVLEIWNLVFIQFNREEEGGSLRLLPAKHVDTGMGLERLVSIMQDKRSNYDTDVFAPLFAAIRAQVQGPAYAGKLGSDDVELRDTAYRVVADHVRTLAFAIADGALPSNEGRGYVLRRVLRRAVRYGKQILGGPPGFFAKLVPAVVDAFGDFYPELREKEAWIVEVIADEEKGFGEMLERGIKYFGEEVVGGLRKQGGSVVSAEQAFFLYDTLGFPVDLTRLMAVEEGFDVDLEGFGKEMEKAKQRSKAAALRARAGAGREGERPLLLQVDETAWLQGKGVEHTDDAEKYGWE-GGQEGRVLALFTHDGFVDEVRGSEEDA--PLIGVILDRTAFYAEAGG 621
            WPA RVR  F+DYF +KH HTF+PSSPVVP  DPTLLF N+GM Q+KP+FLG ADP SPLA L RA N+QKCIRAGGKHNDLEDVGMDTYHHT FEMLGSWSFGDYFK EAI WAWELLT+VYGLPPDR Y TYFGGDA +G+ PD+EAR LWLRFLP  RVLP   K+NFWEMG+TGPCGPC+EIH+DR+GGRDAAALVN DDPDVLEIWNLVF+QFNR E  G LR LPAKHVDTGMG ERLVS++QDKRSNYDTDVF PLF  I+     P Y GKLG +D +L+DTAYRV+ADH+RTL+FAIADGALPSNEGRGYVLRR+LRRAVRYG+Q+LG   GFFA LVP V  + GD +PELR +   +  VIA+EE  F   L RGIK F       ++ QG   +  + AFFLYDT+GFP DLT+LMA E G +VD EGF +++++ + RS AAA  A+ G        L L  ++TA L  +G  +TDD++KY WE   +  ++ A+FT DGFVD V+    +A    +G++LDRTAFY+ AGG
Sbjct:   65 WPAERVRSVFIDYFAKKHAHTFYPSSPVVPYNDPTLLFINSGMAQFKPVFLGNADPASPLASLVRAANTQKCIRAGGKHNDLEDVGMDTYHHTLFEMLGSWSFGDYFKAEAITWAWELLTEVYGLPPDRFYATYFGGDARLGLAPDEEARQLWLRFLPESRVLPGSAKDNFWEMGDTGPCGPCTEIHYDRIGGRDAAALVNNDDPDVLEIWNLVFMQFNR-EPSGDLRPLPAKHVDTGMGFERLVSVLQDKRSNYDTDVFMPLFTEIQKLTGAPPYTGKLGDEDPKLKDTAYRVIADHIRTLSFAIADGALPSNEGRGYVLRRILRRAVRYGRQMLGAQEGFFAALVPTVAASLGDTFPELRSQLGKVQAVIAEEEMAFTSTLSRGIKEFS-SYAATVKAQGVKTIDGKSAFFLYDTMGFPFDLTQLMAREAGLEVDTEGFNEQIKQQRARSAAAAQAAKGGGS------LTLGAEQTAALGAQGHAYTDDSDKYSWELPAKPSKLQAIFTADGFVDRVQAVAGNAEETTVGLVLDRTAFYSVAGG 602          
BLAST of EWM22315.1 vs. NCBI_GenBank
Match: gi|299115131|emb|CBN75498.1| (Alanyl-tRNA Synthetase [Ectocarpus siliculosus])

HSP 1 Score: 716.072 bits (1847), Expect = 0.000e+0
Identity = 350/580 (60.34%), Postives = 429/580 (73.97%), Query Frame = 0
Query:   69 PFATSSSDQEWPANRVRQTFMDYFVQKHGHTFFPSSPVVPLADPTLLFANAGMNQYKPIFLGQADPNSPLAKLERAVNSQKCIRAGGKHNDLEDVGMDTYHHTFFEMLGSWSFGDYFKEEAIRWAWELLTDVYGLPPDRLYVTYFGGDAAMGVPPDDEARDLWLRFLPPERVLPFGKKENFWEMGETGPCGPCSEIHFDRVGGRDAAALVNQDDPDVLEIWNLVFIQFNREEEGGSLRLLPAKHVDTGMGLERLVSIMQDKRSNYDTDVFAPLFAAIRAQVQGPAYAGKLGSDDVELRDTAYRVVADHVRTLAFAIADGALPSNEGRGYVLRRVLRRAVRYGKQILGGPPGFFAKLVPAVVDAFGDFYPELREKEAWIVEVIADEEKGFGEMLERGIKYFGEEVVGGLRKQGGSVVSAEQAFFLYDTLGFPVDLTRLMAVEEGFDVDLEGFGKEMEKAKQRSKAAALRARAGAGREGERPLLLQVDETAWLQGKGVEHTDDAEKYGWEGGQEGRVLALFTHDGFVDEVR-------GSEEDAPLIGVILDRTAFYAEAGGAGGRHGE----AGGDGGRGG 637
            P       Q+W   +VRQTF+D+F  K  HTF+PSSPVVP+ DP+LLFANAGMNQ+KP+FLGQ DP+SPLA L+RAVNSQKCIRAGGKHNDL+DVG D YHHTFFEMLG+WSFGDYFKEEA+ W +E L +V+GLP DRLY TYFGGD  +G+ PD E RDLWL+ LP +RV+P  +K+NFWEMG+ GPCGPCSE+HFDR+GGR+AA+LVN DDPDV+EIWNLVF+QFNR +E G+L+LLPAKHVDTG+GLERLVSI+QDKRSNYDTDVF PLF AI+     P Y GK+G +DV L+DTAYRVVADH R L+FAI DGA+P+N+GRGYVLRR+LRRAVRYG+ +L  PPGFF K+VP VV  FGD YPELREKEA+++E+I +EE+ F  MLERGIK+F +EV    R +  + +  + AFFLYD++GFP+DLT++MA E G  VD EGF  EM   K RSK A    RA         + L  DET+ L  +GV+ TDD  KY W      +V+ALF  +               S +DA  +G++LD T FY+EAGG     G+    AGG+ G  G
Sbjct:  142 PEGVGDQQQQWSVTKVRQTFIDHFKSKREHTFYPSSPVVPVNDPSLLFANAGMNQFKPVFLGQTDPSSPLAGLKRAVNSQKCIRAGGKHNDLDDVGRDVYHHTFFEMLGTWSFGDYFKEEAVEWGFEALNEVFGLPADRLYATYFGGDEELGLAPDLETRDLWLKVLPEDRVMPGDRKDNFWEMGDVGPCGPCSELHFDRIGGRNAASLVNMDDPDVIEIWNLVFMQFNR-DEAGNLKLLPAKHVDTGLGLERLVSILQDKRSNYDTDVFGPLFDAIQDVTGCPPYEGKVGDEDVGLKDTAYRVVADHARALSFAITDGAVPANDGRGYVLRRILRRAVRYGQDVLKAPPGFFQKIVPVVVAEFGDMYPELREKEAFVMEIIKEEEEAFSSMLERGIKHF-KEVEEEQRGKSSNTIPGDTAFFLYDSMGFPLDLTQVMAEEVGMTVDEEGFANEMAAQKARSKEAEAARRAAGAGVRA--MALGADETSRLAEEGVKPTDDEAKYTWSTTTGNKVVALFDGETLSTTASQSGGTAAASSDDATTVGILLDSTPFYSEAGGQVSDSGKLVVSAGGEDGDDG 717          
BLAST of EWM22315.1 vs. NCBI_GenBank
Match: gi|219125523|ref|XP_002183027.1| (predicted protein [Phaeodactylum tricornutum CCAP 1055/1] >gi|217405302|gb|EEC45245.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1])

HSP 1 Score: 706.827 bits (1823), Expect = 0.000e+0
Identity = 344/565 (60.88%), Postives = 420/565 (74.34%), Query Frame = 0
Query:   79 WPANRVRQTFMDYFVQK-HGHTFFPSSPVVPLADPTLLFANAGMNQYKPIFLGQADPNSPLAKLERAVNSQKCIRAGGKHNDLEDVGMDTYHHTFFEMLGSWSFGDYFKEEAIRWAWELLTDVYGLPPDRLYVTYFGGDAAMGVPPDDEARDLWLRFLPPERVLPFGKKENFWEMGETGPCGPCSEIHFDRVGGRDAAALVNQDDPDVLEIWNLVFIQFNREEEGGSLRLLPAKHVDTGMGLERLVSIMQDKRSNYDTDVFAPLFAAIRAQVQGPAYAGKLGSDDVELRDTAYRVVADHVRTLAFAIADGALPSNEGRGYVLRRVLRRAVRYGKQILGGPPGFFAKLVPAVVDAFGDFYPELREKEAWIVEVIADEEKGFGEMLERGIKYFGEEVVGGLRKQGGSVVSAEQAFFLYDTLGFPVDLTRLMAVEEGFDVDLEGFGKEMEKAKQRSKAAALRARAGAGREGERPLL-LQVDETAWLQGKGVEHTDDAEKYGWEGGQEGRVLALFTHDGFVDEVRGSEEDAPLIGVILDRTAFYAEAGGAGGRHG------EAGGDGGR 635
            W  ++VR TF+D+F Q+   HTF  SS   PL DPTLLF NAGMNQ+KP+FLGQ DPNSPLA ++RAVNSQKCIRAGGKHNDLEDVG DTYHHTFFEMLGSWSFGDYFK+EAI +AW+LLT+VY L PDRLY TYF GD A+G+ PD EARDLWLR+LP  RV+    ++NFWEMGE GPCGPCSEIH+DR+G RDAAA VN DDP V+EIWN+VFIQ+NRE +   L+ LPAKH+DTGMGLERLVSI+Q+K SNYD DVF PLFA +        Y G++G+DDV+L+DTAYR +ADH RTLAFAIADGA+P+NEGRGYVLRR+LRRA RYG+QIL   PGFFA L+P VV+ FG+ YPELR  E+ I+E++ +EE+ FG+ML+RGIK+F  E+ G L++     +S E+AFF+YDTLGFPVDLT LMA E G  VD+ GF   ME  K RS+ A   ARAG       P+L L  ++TAWL  + V  TDD  KY W+      V+AL+  DGF+     + +    +G++LD+++FYAEAGG     G      EAG   GR
Sbjct:    8 WTTDKVRSTFIDFFEQEPRSHTFQRSSACAPLNDPTLLFTNAGMNQFKPVFLGQVDPNSPLANVQRAVNSQKCIRAGGKHNDLEDVGRDTYHHTFFEMLGSWSFGDYFKKEAIDYAWQLLTEVYRLDPDRLYATYFQGDDALGLAPDFEARDLWLRYLPAARVIGCDVRDNFWEMGEVGPCGPCSEIHYDRIGNRDAAAFVNADDPQVIEIWNIVFIQYNREPD--KLQTLPAKHIDTGMGLERLVSILQNKDSNYDIDVFQPLFAKLATHTDRGPYTGRVGTDDVDLKDTAYRAIADHARTLAFAIADGAVPNNEGRGYVLRRILRRATRYGQQILHCAPGFFATLIPVVVETFGETYPELRAAESTILEIVQEEEQAFGDMLDRGIKFFT-ELEGELKENKVLEISGEKAFFMYDTLGFPVDLTELMAQEAGLSVDMAGFANAMETQKTRSRQAQKTARAGNA-----PVLELVAEQTAWLVDQNVLPTDDGFKYKWDVQLPATVMALYGKDGFLTG-DSTADQGDFVGIVLDKSSFYAEAGGQEADVGTLEFLDEAGTITGR 563          
BLAST of EWM22315.1 vs. NCBI_GenBank
Match: gi|224014532|ref|XP_002296928.1| (alanine-trna ligase, partial [Thalassiosira pseudonana CCMP1335] >gi|220968308|gb|EED86656.1| alanine-trna ligase, partial [Thalassiosira pseudonana CCMP1335])

HSP 1 Score: 697.967 bits (1800), Expect = 0.000e+0
Identity = 344/557 (61.76%), Postives = 419/557 (75.22%), Query Frame = 0
Query:   78 EWPANRVRQTFMDYFVQKHGHTFFPSSPVVPLADPTLLFANAGMNQYKPIFLGQADPNSPLAKLERAVNSQKCIRAGGKHNDLEDVGMDTYHHTFFEMLGSWSFGDYFKEEAIRWAWELLTDVYGLPPDRLYVTYFGGDAAMGVPPDDEARDLWLRFLPPERVLPFGKKENFWEMGETGPCGPCSEIHFDRVGGRDAAALVNQDDPDVLEIWNLVFIQFNREEEGGSLRLLPAKHVDTGMGLERLVSIMQDKRSNYDTDVFAPLFAAIRAQVQGPAYAGKLGSDDVELRDTAYRVVADHVRTLAFAIADGALPSNEGRGYVLRRVLRRAVRYGKQILGGPPGFFAKLVPAVVDAFGDFYPELREKEAWIVEVIADEEKGFGEMLERGIKYFGEEVVGGLRKQGGSVVSAEQAFFLYDTLGFPVDLTRLMAVEEGFDVDLEGFGKEMEKAKQRSKAAALRARAGAGREGERPLLLQVDETAWLQGKGVEHTDDAEKYGWEGGQEGRVLALFTHDGFVDEVRGSEEDAPLIGVILDRTAFYAEAGGAGGRHGEAGGDGG 634
            EW  +++R TF+ YF  KH HTF PSSP  PL DPTLLF NAGMNQ+KPIFLG+A P + LA L RAVNSQKCIRAGGKHNDLEDVG DTYHHTFFEMLGSWSFGDYFK+EAI +AW+LLT+VYG+  +RLY TYF GD A+G+  D EA+D WLR+LP ERVL    K+NFWEMG+TGPCGPCSEIH+DR+G RDA+ALVN+DDPDV+EIWNLVFIQFNR+E G  L  LPAKHVDTGMGLERL S++Q+K SNYD D F P+F AI        Y GKLG +D  L+DTAYR VADH RTL FA+ADGA+P NEGRGYVLRR+LRRA RYG+QIL   PGFF+ LVP VV+ FG+ YPEL   +A I+E++ +EE+ F  ML+RGIKYF EE+    +K    +V  ++AFFLYDTLGFP+DLT LMA E G  VD++GF +EME  KQRS+ A L A+   G  G+R L L  ++TAWL  +G+  TDD+ KY W+   +  + A+FT DGF+ E   ++E    +G++LD+T+FYAEAGG     G    +GG
Sbjct:    1 EWTTSKIRSTFISYFQSKHSHTFIPSSPSAPLNDPTLLFTNAGMNQFKPIFLGRAPPGTELATLTRAVNSQKCIRAGGKHNDLEDVGKDTYHHTFFEMLGSWSFGDYFKKEAIDYAWDLLTEVYGIEEERLYATYFQGDEALGLEEDTEAKDFWLRYLPEERVLGCSAKDNFWEMGDTGPCGPCSEIHYDRIGNRDASALVNEDDPDVIEIWNLVFIQFNRDENG--LNPLPAKHVDTGMGLERLCSLLQNKSSNYDIDAFTPIFDAIEKVANVGPYEGKLGEEDKTLKDTAYRAVADHARTLTFALADGAVPDNEGRGYVLRRILRRATRYGQQILKCEPGFFSTLVPVVVEIFGEHYPELIANQANIIEIVQEEEEAFSTMLDRGIKYFEEEISDDKKK----LVPGDKAFFLYDTLGFPIDLTELMATEAGMTVDMKGFEEEMEGQKQRSREARLAAK---GLGGQR-LELIAEQTAWLADEGIADTDDSSKYDWDKVVDASIKAVFTSDGFLGEGDVAKE-GDTVGLVLDKTSFYAEAGGQDTDLGTISFEGG 546          
BLAST of EWM22315.1 vs. NCBI_GenBank
Match: gi|1189387976|gb|OSX75016.1| (hypothetical protein BU14_0258s0021 [Porphyra umbilicalis])

HSP 1 Score: 693.345 bits (1788), Expect = 0.000e+0
Identity = 351/551 (63.70%), Postives = 413/551 (74.95%), Query Frame = 0
Query:   73 SSSDQEWPANRVRQTFMDYFVQKHGHTFFPSSPVVPLADPTLLFANAGMNQYKPIFLGQADPNSPLAKLERAVNSQKCIRAGGKHNDLEDVGMDTYHHTFFEMLGSWSFGDYFKEEAIRWAWELLTDVYGLPPDRLYVTYFGGDAAMGVPPDDEARDLWLRFLPPERVLPFGKKENFWEMGETGPCGPCSEIHFDRVGGRDAAALVNQDDPDVLEIWNLVFIQFNREEEGGSLRLLPAKHVDTGMGLERLVSIMQDKRSNYDTDVFAPLFAAIRAQVQGPAYAGKLGSDDVELRDTAYRVVADHVRTLAFAIADGALPSNEGRGYVLRRVLRRAVRYGKQILGGPPGFFAKLVPAVVDAFGDFYPELREKEAWIVEVIADEEKGFGEMLERGIKYFGEEVVGGLRKQGGSVVSAEQAFFLYDTLGFPVDLTRLMAVEEGFDVDLEGFGKEMEKAKQRSKAAALRARAGAGREGERPLLLQVDETAWLQGKGVEHTDDAEKYGWEGGQEGRVLALFTHDGFVDEVRGSEEDAPLI--GVILDRTAFYAEAGG 621
            +++D+ WP+ RVRQTF+D+F   HGH    SSPVVP  DPTLLFANAGMNQ+KP+FLGQADPN PLA LERA N+QKCIRAGGKHNDLEDVG DTYHHTFFEMLGSWSFG YFK EAI  A+ LL   YGLPP++LY +YFGGDAA+G+ PD EARDLWLR LP ERVLPF  K+NFWEMG+ GPCGPCSE+HFDR+GGRDAAALVN DDP V+EIWNLVFIQ++RE + G L  LPAKHVDTGMG ERL SI+Q K SNYDTDVF P+F AI+      AY GKLG+DDV+  D AYRVVADHVRTL+FAIADGA+PS+EGRGYVLRR+LRRAVRYG Q LGG  GFFA+LVPAVV+  G  +PEL EK+  +V VIADEE  F   LERGI+ F  +    L+  G +VV   +AFFLYDT+GFPVDLT  MA E G  VD  G+   +E A+  S+A     RA  G      L+L+ ++T+ L  +GV  TDDA KY  +      V A++T DGFV+ + G+  DA     GV+LD T+FYAEAGG
Sbjct:    2 AAADRAWPSARVRQTFLDFFAS-HGHKLVKSSPVVPHDDPTLLFANAGMNQFKPLFLGQADPNGPLANLERATNTQKCIRAGGKHNDLEDVGKDTYHHTFFEMLGSWSFGSYFKAEAIEMAYALLITKYGLPPEQLYASYFGGDAALGLEPDTEARDLWLRHLPAERVLPFDAKDNFWEMGDVGPCGPCSELHFDRIGGRDAAALVNADDPAVIEIWNLVFIQYSREAD-GKLNALPAKHVDTGMGFERLTSILQGKPSNYDTDVFTPIFDAIQEGTGCRAYGGKLGTDDVDGVDMAYRVVADHVRTLSFAIADGAVPSSEGRGYVLRRILRRAVRYGSQFLGGSDGFFARLVPAVVELMGTAFPELVEKKELVVSVIADEESTFSSTLERGIERF-NKTAAELKAGGKTVVPGTEAFFLYDTMGFPVDLTARMAEEVGLTVDTAGYEAALESARAVSRADRAARRAIGGDGA--ALVLEAEQTSTLASRGVVPTDDAAKYELDTSPSATVRAIYTGDGFVETLSGASGDAEATAAGVVLDATSFYAEAGG 547          
BLAST of EWM22315.1 vs. NCBI_GenBank
Match: gi|301102849|ref|XP_002900511.1| (alanyl-tRNA synthetase, mitochondrial precursor [Phytophthora infestans T30-4] >gi|262101774|gb|EEY59826.1| alanyl-tRNA synthetase, mitochondrial precursor [Phytophthora infestans T30-4])

HSP 1 Score: 690.263 bits (1780), Expect = 0.000e+0
Identity = 330/563 (58.61%), Postives = 413/563 (73.36%), Query Frame = 0
Query:   65 DGRIPFATSSSDQEWPANRVRQTFMDYFVQKHG--HTFFPSSPVVPLADPTLLFANAGMNQYKPIFLGQADPNSPLAKLERAVNSQKCIRAGGKHNDLEDVGMDTYHHTFFEMLGSWSFGDYFKEEAIRWAWELLTDVYGLPPDRLYVTYFGGDAAMGVPPDDEARDLWLRFLPPERVLPFGKKENFWEMGETGPCGPCSEIHFDRVGGRDAAALVNQDDPDVLEIWNLVFIQFNREEEGGSLRLLPAKHVDTGMGLERLVSIMQDKRSNYDTDVFAPLFAAIRAQVQGPAYAGKLGSDDVELRDTAYRVVADHVRTLAFAIADGALPSNEGRGYVLRRVLRRAVRYGKQILGGPPGFFAKLVPAVVDAFGDFYPELREKEAWIVEVIADEEKGFGEMLERGIKYFGEEVVGGLRKQGGSVVSAEQAFFLYDTLGFPVDLTRLMAVEEGFDVDLEGFGKEMEKAKQRSKAAALRARAGAGREGERPLLLQVDETAWLQGKGVEHTDDAEKYGWEGGQEGRVLALFT----HDGFVDEVRGSEEDAPLIGVILDRTAFYAEAGG 621
            +G++   +  S + WPA R+R+TF +YF  +    HTF+ S PVVPL DPTLLF NAGMNQYKPIFLGQ DP+ P+AKL RA NSQKCIRAGGKHNDL+DVG D YHHTFFEMLG+WSFG+YFK+EA+  ++ LLT+V+G+  DRLY TYFGGD   G+P D+E R++WL +LP ERVLPFG K+NFWEMG+ GPCGPC+EIH+DR+G RDA+ LVN D PDV+EIWN VFIQFNRE++ G L  LP KHVDTGMG ERL SI+Q K SNYDTDVF PLFAAI+   +   Y GKLG +D + +D AYRVVADHVRTL FAI DGA+PSN+GRGYVLRR+LRRAVRYG+Q L  P GF  +LVP VV+  G+ +PEL +K+  + E+I DEEK FG  L +GI+ F +++  G+R+    VV  E AFFLYD++GFP+DLT +MA EEG  VD++G+ + M    +RSK      R   G  G RPL+L+  ET+ L GK +  TDD  KY W      +V+A+FT       FVDEV+    D   +GVILD+T+FY++AGG
Sbjct:   12 EGQVAALSPFSVESWPAARIRKTFFEYFQNQKELPHTFYKSCPVVPLDDPTLLFINAGMNQYKPIFLGQVDPSHPMAKLVRACNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGNYFKKEAVHLSFTLLTEVFGIDKDRLYATYFGGDEKQGLPSDEETREIWLNYLPTERVLPFGCKDNFWEMGDVGPCGPCTEIHYDRIGNRDASELVNADRPDVIEIWNNVFIQFNREQD-GKLVPLPHKHVDTGMGFERLASILQGKDSNYDTDVFTPLFAAIQKSTKAAPYTGKLGEEDPDKKDMAYRVVADHVRTLTFAITDGAVPSNDGRGYVLRRILRRAVRYGQQFLNAPSGFLTELVPVVVNMLGEAFPELVQKQKEVEEIILDEEKSFGRTLNKGIERF-KKIAQGIREANKLVVPGEDAFFLYDSMGFPIDLTEIMAEEEGMTVDIKGYEECMRLQSERSKM----DRKKGGSNGARPLVLEARETSTLAGKHISATDDMAKYEWNVKTSAKVVAIFTTTESSSDFVDEVKAG--DFERVGVILDKTSFYSQAGG 566          
BLAST of EWM22315.1 vs. NCBI_GenBank
Match: gi|566008041|gb|ETI30952.1| (alanine-tRNA ligase [Phytophthora parasitica P1569] >gi|568033563|gb|ETM31265.1| alanine-tRNA ligase [Phytophthora parasitica])

HSP 1 Score: 688.723 bits (1776), Expect = 0.000e+0
Identity = 330/563 (58.61%), Postives = 414/563 (73.53%), Query Frame = 0
Query:   65 DGRIPFATSSSDQEWPANRVRQTFMDYFVQKHG--HTFFPSSPVVPLADPTLLFANAGMNQYKPIFLGQADPNSPLAKLERAVNSQKCIRAGGKHNDLEDVGMDTYHHTFFEMLGSWSFGDYFKEEAIRWAWELLTDVYGLPPDRLYVTYFGGDAAMGVPPDDEARDLWLRFLPPERVLPFGKKENFWEMGETGPCGPCSEIHFDRVGGRDAAALVNQDDPDVLEIWNLVFIQFNREEEGGSLRLLPAKHVDTGMGLERLVSIMQDKRSNYDTDVFAPLFAAIRAQVQGPAYAGKLGSDDVELRDTAYRVVADHVRTLAFAIADGALPSNEGRGYVLRRVLRRAVRYGKQILGGPPGFFAKLVPAVVDAFGDFYPELREKEAWIVEVIADEEKGFGEMLERGIKYFGEEVVGGLRKQGGSVVSAEQAFFLYDTLGFPVDLTRLMAVEEGFDVDLEGFGKEMEKAKQRSKAAALRARAGAGREGERPLLLQVDETAWLQGKGVEHTDDAEKYGWEGGQEGRVLALFT----HDGFVDEVRGSEEDAPLIGVILDRTAFYAEAGG 621
            +G++   +  S + WPA R+R+TF++YF  +    HTF+ S PVVPL DPTLLF NAGMNQYKPIFLGQ DP+ P+AKL RA NSQKCIRAGGKHNDL+DVG D YHHTFFEMLG+WSFG+YFK+EA+  ++ LLT+V+G+  DRLY TYFGGD   G+P D+E R++WL +LP ERVLPFG K+NFWEMG+ GPCGPC+EIH+DR+G RDA+ LVN D PDV+EIWN VFIQFNRE++ G L  LP KHVDTGMG ERL SI+Q K SNYDTDVF PLFAAI+   +   Y GKLG +D + +D AYRVVADHVRTL FAI DGA+PSN+GRGYVLRR+LRRAVRYG+Q L  P GF  +LVP VV+  G+ +PEL +K+  + E+I DEEK FG  L +GI+ F +++  G+R+    VV  E AFFLYD++GFP+DLT +MA EEG  VD++G+ + M    +RSK      R   G  G RPL+L+  ET+ L GK +  TDD  KY W      +V+A+FT       FVDEV+    D   +GVILD+T+FY++AGG
Sbjct:   26 EGQVADLSPFSVENWPAARIRKTFVEYFENQKDLPHTFYKSCPVVPLDDPTLLFINAGMNQYKPIFLGQVDPSHPMAKLVRACNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGNYFKKEAVHLSFTLLTEVFGIDKDRLYATYFGGDEKQGLPSDEETREIWLNYLPAERVLPFGCKDNFWEMGDVGPCGPCTEIHYDRIGNRDASKLVNADLPDVIEIWNNVFIQFNREQD-GKLVPLPHKHVDTGMGFERLASILQGKDSNYDTDVFTPLFAAIQKSTKAAPYTGKLGKEDPDKKDMAYRVVADHVRTLTFAITDGAVPSNDGRGYVLRRILRRAVRYGQQFLNAPSGFLTELVPVVVNMLGEAFPELIQKQKEVEEIILDEEKSFGRTLNKGIERF-KKIAQGIREANKLVVPGEDAFFLYDSMGFPIDLTEIMAEEEGMTVDIKGYEECMRLQSERSKM----DRKKGGSNGARPLVLEARETSTLAGKHISATDDMAKYEWNIKTPAKVVAIFTTTESSSDFVDEVKAG--DFERVGVILDKTSFYSQAGG 580          
BLAST of EWM22315.1 vs. NCBI_GenBank
Match: gi|970629677|gb|KUF76864.1| (Alanine--tRNA ligase [Phytophthora nicotianae])

HSP 1 Score: 687.952 bits (1774), Expect = 0.000e+0
Identity = 330/563 (58.61%), Postives = 413/563 (73.36%), Query Frame = 0
Query:   65 DGRIPFATSSSDQEWPANRVRQTFMDYFVQKHG--HTFFPSSPVVPLADPTLLFANAGMNQYKPIFLGQADPNSPLAKLERAVNSQKCIRAGGKHNDLEDVGMDTYHHTFFEMLGSWSFGDYFKEEAIRWAWELLTDVYGLPPDRLYVTYFGGDAAMGVPPDDEARDLWLRFLPPERVLPFGKKENFWEMGETGPCGPCSEIHFDRVGGRDAAALVNQDDPDVLEIWNLVFIQFNREEEGGSLRLLPAKHVDTGMGLERLVSIMQDKRSNYDTDVFAPLFAAIRAQVQGPAYAGKLGSDDVELRDTAYRVVADHVRTLAFAIADGALPSNEGRGYVLRRVLRRAVRYGKQILGGPPGFFAKLVPAVVDAFGDFYPELREKEAWIVEVIADEEKGFGEMLERGIKYFGEEVVGGLRKQGGSVVSAEQAFFLYDTLGFPVDLTRLMAVEEGFDVDLEGFGKEMEKAKQRSKAAALRARAGAGREGERPLLLQVDETAWLQGKGVEHTDDAEKYGWEGGQEGRVLALFT----HDGFVDEVRGSEEDAPLIGVILDRTAFYAEAGG 621
            +G++   +  S + WPA R+R+TF++YF  +    HTF+ S PVVPL DPTLLF NAGMNQYKPIFLGQ DP+ P+AKL RA NSQKCIRAGGKHNDL+DVG D YHHTFFEMLG+WSFG+YFK+EA+  ++ LLT+V+G+  DRLY TYFGGD   G+P D+E R++WL +LP ERVLPFG K+NFWEMG+ GPCGPC+EIH+DR+G RDA+ LVN D PDV+EIWN VFIQFNRE++ G L  LP KHVDTGMG ERL SI+Q K SNYDTDVF PLFAAI+   +   Y GKLG +D + +D AYRVVADHVRTL FAI DGA+PSN+GRGYVLRR+LRRAVRYG+Q L  P GF  +LVP VV+  G+ +PEL +K+  + E+I DEEK FG  L +GI+ F +++  G+R+    VV  E AFFLYD++GFP+DLT +MA EEG  VD++G+ + M    +RSK      R   G  G RPL+L+  ET  L GK +  TDD  KY W      +V+A+FT       FVDEV+    D   +GVILD+T+FY++AGG
Sbjct:   26 EGQVADLSPFSVENWPAARIRKTFVEYFENQKDLPHTFYKSCPVVPLDDPTLLFINAGMNQYKPIFLGQVDPSHPMAKLVRACNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGNYFKKEAVHLSFTLLTEVFGIDKDRLYATYFGGDEKQGLPSDEETREIWLNYLPAERVLPFGCKDNFWEMGDVGPCGPCTEIHYDRIGNRDASKLVNADLPDVIEIWNNVFIQFNREQD-GKLVPLPHKHVDTGMGFERLASILQGKDSNYDTDVFTPLFAAIQKSTKAAPYTGKLGKEDPDKKDMAYRVVADHVRTLTFAITDGAVPSNDGRGYVLRRILRRAVRYGQQFLNAPSGFLTELVPVVVNMLGEAFPELIQKQKEVEEIILDEEKSFGRTLNKGIERF-KKIAQGIREANKLVVPGEDAFFLYDSMGFPIDLTEIMAEEEGMTVDIKGYEECMRLQSERSKM----DRKKGGSNGARPLVLEARETCTLAGKHISATDDMAKYEWNIKTPAKVVAIFTTTESSSDFVDEVKAG--DFERVGVILDKTSFYSQAGG 580          
BLAST of EWM22315.1 vs. NCBI_GenBank
Match: gi|570965781|gb|ETP28900.1| (alanine-tRNA ligase [Phytophthora parasitica P10297])

HSP 1 Score: 687.567 bits (1773), Expect = 0.000e+0
Identity = 329/563 (58.44%), Postives = 413/563 (73.36%), Query Frame = 0
Query:   65 DGRIPFATSSSDQEWPANRVRQTFMDYFVQKHG--HTFFPSSPVVPLADPTLLFANAGMNQYKPIFLGQADPNSPLAKLERAVNSQKCIRAGGKHNDLEDVGMDTYHHTFFEMLGSWSFGDYFKEEAIRWAWELLTDVYGLPPDRLYVTYFGGDAAMGVPPDDEARDLWLRFLPPERVLPFGKKENFWEMGETGPCGPCSEIHFDRVGGRDAAALVNQDDPDVLEIWNLVFIQFNREEEGGSLRLLPAKHVDTGMGLERLVSIMQDKRSNYDTDVFAPLFAAIRAQVQGPAYAGKLGSDDVELRDTAYRVVADHVRTLAFAIADGALPSNEGRGYVLRRVLRRAVRYGKQILGGPPGFFAKLVPAVVDAFGDFYPELREKEAWIVEVIADEEKGFGEMLERGIKYFGEEVVGGLRKQGGSVVSAEQAFFLYDTLGFPVDLTRLMAVEEGFDVDLEGFGKEMEKAKQRSKAAALRARAGAGREGERPLLLQVDETAWLQGKGVEHTDDAEKYGWEGGQEGRVLALFT----HDGFVDEVRGSEEDAPLIGVILDRTAFYAEAGG 621
            +G++   +  S + WPA R+R+TF++YF  +    HTF+ S PVVPL DPTLLF NAGMNQYKPIFLGQ DP+ P+AKL RA NSQKCIRAGGKHNDL+DVG D YHHTFFEMLG+WSFG+YFK+EA+  ++ LLT+V+G+  DRLY TYFGGD   G+P D+E R++WL +LP ERVLPFG K+NFWEMG+ GPCGPC+EIH+DR+G RDA+ LVN D PDV+EIWN VFIQFNRE++ G L  LP KHVDTGMG ERL SI+Q K SNYDTDVF PLFAAI+   +   Y GKLG +D + +D AYRVVADHVRTL FAI DGA+PSN+GRGYVLRR+LRRAVRYG+Q L  P GF  +LVP VV+  G+ +PEL +K+  + E+I DEEK FG  L +GI+ F +++  G+R+    VV  E  FFLYD++GFP+DLT +MA EEG  VD++G+ + M    +RSK      R   G  G RPL+L+  ET+ L GK +  TDD  KY W      +V+A+FT       FVDEV+    D   +GVILD+T+FY++AGG
Sbjct:   26 EGQVADLSPFSVENWPAARIRKTFVEYFENQKDLPHTFYKSCPVVPLDDPTLLFINAGMNQYKPIFLGQVDPSHPMAKLVRACNSQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGNYFKKEAVHLSFTLLTEVFGIDKDRLYATYFGGDEKQGLPSDEETREIWLNYLPAERVLPFGCKDNFWEMGDVGPCGPCTEIHYDRIGNRDASKLVNADLPDVIEIWNNVFIQFNREQD-GKLVPLPHKHVDTGMGFERLASILQGKDSNYDTDVFTPLFAAIQKSTKAAPYTGKLGKEDPDKKDMAYRVVADHVRTLTFAITDGAVPSNDGRGYVLRRILRRAVRYGQQFLNAPSGFLTELVPVVVNMLGEAFPELIQKQKEVEEIILDEEKSFGRTLNKGIERF-KKIAQGIREANKLVVPGEDTFFLYDSMGFPIDLTEIMAEEEGMTVDIKGYEECMRLQSERSKM----DRKKGGSNGARPLVLEARETSTLAGKHISATDDMAKYEWNIKTPAKVVAIFTTTESSSDFVDEVKAG--DFERVGVILDKTSFYSQAGG 580          
The following BLAST results are available for this feature:
BLAST of EWM22315.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102812|gb|EWM22315.1|0.000e+0100.00alanyl-trna synthetase [Nannochloropsis gaditana][more]
gi|922853709|gb|KOO22301.1|0.000e+064.84alanyl-tRNA synthetase [Chrysochromulina sp. CCMP2... [more]
gi|299115131|emb|CBN75498.1|0.000e+060.34Alanyl-tRNA Synthetase [Ectocarpus siliculosus][more]
gi|219125523|ref|XP_002183027.1|0.000e+060.88predicted protein [Phaeodactylum tricornutum CCAP ... [more]
gi|224014532|ref|XP_002296928.1|0.000e+061.76alanine-trna ligase, partial [Thalassiosira pseudo... [more]
gi|1189387976|gb|OSX75016.1|0.000e+063.70hypothetical protein BU14_0258s0021 [Porphyra umbi... [more]
gi|301102849|ref|XP_002900511.1|0.000e+058.61alanyl-tRNA synthetase, mitochondrial precursor [P... [more]
gi|566008041|gb|ETI30952.1|0.000e+058.61alanine-tRNA ligase [Phytophthora parasitica P1569... [more]
gi|970629677|gb|KUF76864.1|0.000e+058.61Alanine--tRNA ligase [Phytophthora nicotianae][more]
gi|570965781|gb|ETP28900.1|0.000e+058.44alanine-tRNA ligase [Phytophthora parasitica P1029... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8375rna8375Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications