EWM22337.1, cds8336 (CDS) Nannochloropsis gaditana

Overview
NameEWM22337.1
Unique Namecds8336
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationKK037248.1:489363..489407 -
Alignment locationKK037248.1:489044..489093 -
Alignment locationKK037248.1:488789..488964 -
Alignment locationKK037248.1:488030..488568 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM22337.1
Productglutathione s
Orig transcript idgnl|cribi|Naga_100277g4.2161.mrna
GeneGST
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
KK037248.1supercontigKK037248.1:489363..489407 -
KK037248.1supercontigKK037248.1:489044..489093 -
KK037248.1supercontigKK037248.1:488789..488964 -
KK037248.1supercontigKK037248.1:488030..488568 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR004045Glutathione_S-Trfase_N
IPR004046GST_C
IPR012336Thioredoxin-like_fold
IPR010987Glutathione-S-Trfase_C-like
Homology
BLAST of EWM22337.1 vs. NCBI_GenBank
Match: gi|585102835|gb|EWM22337.1| (glutathione s [Nannochloropsis gaditana])

HSP 1 Score: 552.362 bits (1422), Expect = 0.000e+0
Identity = 269/269 (100.00%), Postives = 269/269 (100.00%), Query Frame = 0
Query:    1 MVRPIFPEQHGKNRKRKNSFSKLPACGCVPWIPHRQTLKIKISMAPFPSLRLIYFDFGGRAEAIRVALHVGKVPFEDVRITEQEFSQQKAAGKYPFGSVPVLEVDSVAYAQSVGILRYVGRLGGLYPEDPLAGLAIDQVVGSVEDIVVATVPYLFASESEKASLKDKLEKNVYPRFFSAFERLLHADEEGFFVGKHLTIADLAVYPILQWITTSIVGPESLDPFPLLKALFRKIEEHEMVKDYYEQERRNSHKEGPEAGKMNTESNKGK 269
            MVRPIFPEQHGKNRKRKNSFSKLPACGCVPWIPHRQTLKIKISMAPFPSLRLIYFDFGGRAEAIRVALHVGKVPFEDVRITEQEFSQQKAAGKYPFGSVPVLEVDSVAYAQSVGILRYVGRLGGLYPEDPLAGLAIDQVVGSVEDIVVATVPYLFASESEKASLKDKLEKNVYPRFFSAFERLLHADEEGFFVGKHLTIADLAVYPILQWITTSIVGPESLDPFPLLKALFRKIEEHEMVKDYYEQERRNSHKEGPEAGKMNTESNKGK
Sbjct:    1 MVRPIFPEQHGKNRKRKNSFSKLPACGCVPWIPHRQTLKIKISMAPFPSLRLIYFDFGGRAEAIRVALHVGKVPFEDVRITEQEFSQQKAAGKYPFGSVPVLEVDSVAYAQSVGILRYVGRLGGLYPEDPLAGLAIDQVVGSVEDIVVATVPYLFASESEKASLKDKLEKNVYPRFFSAFERLLHADEEGFFVGKHLTIADLAVYPILQWITTSIVGPESLDPFPLLKALFRKIEEHEMVKDYYEQERRNSHKEGPEAGKMNTESNKGK 269          
BLAST of EWM22337.1 vs. NCBI_GenBank
Match: gi|873222744|emb|CEM30532.1| (unnamed protein product [Vitrella brassicaformis CCMP3155])

HSP 1 Score: 141.739 bits (356), Expect = 5.968e-38
Identity = 78/200 (39.00%), Postives = 116/200 (58.00%), Query Frame = 0
Query:   49 SLRLIYFDFGGRAEAIRVALHVGKVPFEDVRITEQEFSQQKAAGKYPFGSVPVLEVDSVAYAQSVGILRYVGRLGGLYPEDPLAGLAIDQVVGSVEDIVVATVPYLF-ASESEKASLKDKLEKNVYPRFFSAFERLLHADEEGFFVGKHLTIADLAVYPILQWITTSIVG-PESL---DPFPLLKALFRKIEEHEMVKDY 243
             +++IYF F GRAE +R+AL +  + FED R+T +EF++ KA G  PFG  P++EVD    AQSV  L Y GRL GL P D      + +    +EDIV A +P L    E++K  +K +L    +P++F   E+L  A + G+ VG  LTIADL++Y ++ W+   IVG P+ +        L  +F  ++ HE VK +
Sbjct:    2 GIKIIYFPFKGRAEPVRLALTIAGIDFEDTRVTGEEFAKMKADGVLPFGQFPIIEVDGKPLAQSVAQLIYAGRLAGLIPSDTWEEAKVMEFQMGIEDIVTAMIPALMEKDEAKKMEMKKELADVTFPKWFGYMEKL--AGDGGYAVGSKLTIADLSLYNLMSWLKDGIVGIPKDMFDHGKHTKLNKVFATVDGHEKVKAW 199          
BLAST of EWM22337.1 vs. NCBI_GenBank
Match: gi|298708221|emb|CBJ30560.1| (Glutathione S-transferase [Ectocarpus siliculosus])

HSP 1 Score: 141.354 bits (355), Expect = 1.934e-37
Identity = 77/202 (38.12%), Postives = 118/202 (58.42%), Query Frame = 0
Query:   49 SLRLIYFDFGGRAEAIRVALHVGKVPFEDVRITEQEFSQQKAAGKYPFGSVPVLEVDSVAYAQSVGILRYVGRLGGLYPEDPLAGLAIDQVVGSVEDIVVATVPYLFASESE-KASLKDKLEKNVYPRFFSAFERLLHADEEGFFVGKHLTIADLAVYPILQWITTSI-VG-PES-LDPFPLLKALFRKIEEHEMVKDYYEQ 246
            S+ L YFD  G AEAIR+A +VG +PF+D R++ QEF++ K     PF  +P+L VD   + QS  ILRY G++GGLYP DP+A   +D V+  + DI  A  P ++ + ++ K S++ +L +   P +    ER L      FFVG+ +TI DL +Y  ++W+   + VG P++ L  F  ++A    +  H  V DYY+ 
Sbjct:    3 SITLTYFDIPGPAEAIRLAFYVGGIPFKDRRVSRQEFAKIKR--DLPFAQLPILTVDDEVFPQSAAILRYAGKIGGLYPSDPIAAAKVDAVIDCMFDIQAAIRPSIYETNAQRKLSMRKELSEVTLPLWLQYLERWLERAGTTFFVGEEITICDLVIYTRMKWLRRGVLVGIPDTILRNFRRVRAHSEAVASHPKVDDYYKN 202          
BLAST of EWM22337.1 vs. NCBI_GenBank
Match: gi|669149840|ref|XP_008610482.1| (hypothetical protein SDRG_06480 [Saprolegnia diclina VS20] >gi|530738134|gb|EQC36376.1| hypothetical protein SDRG_06480 [Saprolegnia diclina VS20])

HSP 1 Score: 140.584 bits (353), Expect = 2.269e-37
Identity = 76/212 (35.85%), Postives = 118/212 (55.66%), Query Frame = 0
Query:   47 FPSLRLIYFDFGGRAEAIRVALHVGKVPFEDVRITEQEFSQQKAAGKYPFGSVPVLEVDSVAYAQSVGILRYVGRLGGLYPEDPLAGLAIDQVVGSVEDIVVATVPYLFASESE-KASLKDKLEKNVYPRFFSAFERLLHADEEGFFVGKHLTIADLAVYPILQWITTSIVGPES---LDPFPLLKALFRKIEEHEMVKDYYEQERRNSHKE 254
             PSL+L YFD  GRAE IR+ L +  +PFED R+T   F+ +KA+  +PF  VP L +D V +AQ   + RYVG+L G+YP DP+  L +D+++   ED+V A +P L   + E K +L  +L  +  P  F   ER L   +  F +G+ +T+AD+ +Y +     +    P     +D +P  +A++  +  H  V+ YY Q+   S  E
Sbjct:    7 LPSLKLTYFDMPGRAELIRLVLSLHDIPFEDERLTRDAFAARKAS--FPFEQVPTLTIDGVEFAQGHSLARYVGKLTGMYPSDPIDALRVDEMLSFQEDVVQALIPMLREQDIERKTALATELASSKLPHLFELLERRLAVTKGTFVLGETMTMADVTLYVLFATFKSGRFSPMDTAFVDDYPHWRAIYTVLHGHPKVQAYYAQQAERSKPE 216          
BLAST of EWM22337.1 vs. NCBI_GenBank
Match: gi|813198154|ref|XP_012208660.1| (hypothetical protein SPRG_12960 [Saprolegnia parasitica CBS 223.65] >gi|641526222|gb|KDO20604.1| hypothetical protein SPRG_12960 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 137.117 bits (344), Expect = 5.141e-36
Identity = 75/212 (35.38%), Postives = 116/212 (54.72%), Query Frame = 0
Query:   47 FPSLRLIYFDFGGRAEAIRVALHVGKVPFEDVRITEQEFSQQKAAGKYPFGSVPVLEVDSVAYAQSVGILRYVGRLGGLYPEDPLAGLAIDQVVGSVEDIVVATVPYLFASE-SEKASLKDKLEKNVYPRFFSAFERLLHADEEGFFVGKHLTIADLAVYPILQWITTSIVGPES---LDPFPLLKALFRKIEEHEMVKDYYEQERRNSHKE 254
             PSLRL YFD  GRAE IR+ L +  +PFED R+T   F+ +KA+  +PF  VP L ++ V +AQ   + RYVG+L G+YP DP+  L +D+++   ED+V A +P L   +   K +L  +L  +  P  F   ER L   +  + + + LTIAD+ +Y +     +    P     +D +P  +A++  +  H  V+ YY Q+   S  E
Sbjct:    7 LPSLRLTYFDMPGRAELIRLVLSLHDIPFEDERLTRDAFAARKAS--FPFEQVPTLTINGVEFAQGHSLARYVGKLTGMYPSDPIDALRVDEMLSFQEDVVQALIPMLREQDIVRKTALARELASSKLPHLFELLERRLAVTKGTYVLAETLTIADVTLYVLFATFQSGRFTPMDTAFVDDYPHWRAIYTSMHGHPKVQAYYAQQVERSKSE 216          
BLAST of EWM22337.1 vs. NCBI_GenBank
Match: gi|871251711|ref|XP_005104565.2| (PREDICTED: glutathione S-transferase 1-like [Aplysia californica])

HSP 1 Score: 136.346 bits (342), Expect = 5.574e-36
Identity = 79/196 (40.31%), Postives = 117/196 (59.69%), Query Frame = 0
Query:   49 SLRLIYFDFGGRAEAIRVALHVGKVPFEDVRITEQEFSQQKAAGKYPFGSVPVLEVDSVAYAQSVGILRYVGRLGGLYPEDPLAGLAIDQVVGSVEDIVVATVPYLFASESEKASLKDKLEKNVY-PRFFSAFERLLHADEEGFFVGKHLTIADLAVYPILQWITTSIVGPESLDPFPLLKALFRKIEEHEMVKDY 243
            S +L+YFD  GRAE IR+     +VPFEDVR T QE+ + K     PFG  P LEV S +Y QSV I  Y+ R  GL+ ++ L GLA+DQV+G ++D++   +      E  K     +  K+V+ P+F   FE+LL  +  G+ VG  L++AD+AV+ ++     + +GP  +D FPL+KAL  K+ E + +K Y
Sbjct:    5 SYKLMYFDGMGRAEFIRLVFAAAEVPFEDVRFTHQEWPKYKKLA--PFGQAPYLEVASKSYGQSVAIATYLAREFGLHGKNNLEGLAVDQVLGLIQDLIQFGIKIYHEKEKGKRDELIQGFKDVHQPQFLGYFEKLLSDNGTGYLVGNDLSLADIAVFDVVTGWLGTYMGP--IDDFPLVKALVDKVWERDGIKSY 196          
BLAST of EWM22337.1 vs. NCBI_GenBank
Match: gi|1034735426|gb|OAV89533.1| (hypothetical protein PTTG_04116 [Puccinia triticina 1-1 BBBD Race 1])

HSP 1 Score: 135.961 bits (341), Expect = 1.016e-35
Identity = 76/207 (36.71%), Postives = 112/207 (54.11%), Query Frame = 0
Query:   47 FPSLRLIYFDFGGRAEAIRVALHVGKVPFEDVRITEQEFSQQKAAGKYPFGSVPVLEVDS-VAYAQSVGILRYVGRLGGLYPEDPLAGLAIDQVVGSVEDIVVATVPYLFASESEKASLKDKLEKNVYPRFFSAFERLLHADEEGFFVGKHLTIADLAVYPILQWITTSIVG--PESL-DPFPLLKALFRKIEEHEMVKDYYEQERR 249
             PS +L YFD  GRAEAIR+ALH G +PF D R++ ++F+++K +  +PFG VP L VD      Q V IL+YVGRL GLYP DP     +D ++    D   A   +       K  LK    ++ +P+ F   ER L  +E  F  G  LTIAD  +Y I+  +   ++   P  L D +P +  L++ I+ HE V  + + + +
Sbjct:    1 MPSYKLSYFDAKGRAEAIRLALHCGGIPFTDERLSREQFAEKKES--FPFGQVPNLTVDEKTMIPQEVAILQYVGRLSGLYPSDPEEARQVDVMLNVANDFYSAMAAFFMPDNPGKEQLKTMAVESQFPKLFGYLERYLAKNETTFSAGNKLTIADFRLYSIISNLKAGMLDGCPTDLADKYPHVVKLYQAIDGHEKVASWNKTQAK 205          
BLAST of EWM22337.1 vs. NCBI_GenBank
Match: gi|954194731|gb|KRX07459.1| (Thioredoxin-like fold [Pseudocohnilembus persalinus])

HSP 1 Score: 135.576 bits (340), Expect = 1.306e-35
Identity = 78/203 (38.42%), Postives = 120/203 (59.11%), Query Frame = 0
Query:   57 FGGRAEAIRVALHVGKVPFEDVRITEQEFSQQKAAGKYPFGSVPVLEVDSVAYAQSVGILRYVGRLGGLYP-EDPLAGLAIDQVVGSVEDIVVATVP-YLFASESEKASLKDKLEKNVYPRFFSAFERLLHADEEGFFVG-KHLTIADLAVYPILQWITT-SIVGPES--LDPFPLLKALFRKIEEHEMVKDYY---EQERRN 250
              GRAE IR+A H+G + FED RI+ +EFS+QK  G + FG +PVLE+D + YAQS  ILRYVGRL  LYP EDP+  L +DQ + S+++IV   +P Y    + E+   + KL +N +  +    E  L  D  G+F G + ++IA+L +  ++ W+T  S+ G  S     +  L+     ++  + VK+YY   E+E++ 
Sbjct:    1 MAGRAEPIRLAFHIGGIQFEDNRISMEEFSKQKNEGAFKFGQIPVLEIDGIQYAQSHAILRYVGRLTNLYPQEDPIQCLKVDQALYSIDEIVTRIIPTYFIKDKEEQLQARKKLSENEFSFWLEKLESQLK-DGNGYFAGNQQISIAELYMVQVVDWLTRGSLEGVPSDIAKKYGFLQKSIEFVKNIDKVKEYYARLEEEKKQ 202          
BLAST of EWM22337.1 vs. NCBI_GenBank
Match: gi|871273337|ref|XP_005111883.2| (PREDICTED: glutathione S-transferase 1-like [Aplysia californica])

HSP 1 Score: 135.576 bits (340), Expect = 1.402e-35
Identity = 76/196 (38.78%), Postives = 114/196 (58.16%), Query Frame = 0
Query:   49 SLRLIYFDFGGRAEAIRVALHVGKVPFEDVRITEQEFSQQKAAGKYPFGSVPVLEVDSVAYAQSVGILRYVGRLGGLYPEDPLAGLAIDQVVGSVEDIVVATVPYLF-ASESEKASLKDKLEKNVYPRFFSAFERLLHADEEGFFVGKHLTIADLAVYPILQWITTSIVGPESLDPFPLLKALFRKIEEHEMVKDY 243
            SL+L+YF+  GRAE IR+ L      +EDVR+T +++  +K +   PFGS+P LEV+   Y QS+ I  ++ +  GLY      GL ID V+  ++DI+   V ++F   E +K  L    +    PRFF  FE++L  +  G+FVG  L++AD+AVY +   +    +G  S+D FPLLKAL  K+   E +K Y
Sbjct:    5 SLKLVYFNGKGRAEMIRLVLAAAGKEYEDVRVTSEQWKDKKPS--VPFGSLPCLEVNGKMYGQSMAIATFLAKEFGLYGNGNTDGLVIDGVLQLIQDIITLAVKFMFEKDEKKKEELMAAFKDTESPRFFGYFEKMLKENGTGYFVGSKLSLADIAVYDVFTGMMAPCLG--SMDSFPLLKALIDKVGADEKIKAY 196          
BLAST of EWM22337.1 vs. NCBI_GenBank
Match: gi|813219654|ref|XP_012211204.1| (hypothetical protein SPRG_16543 [Saprolegnia parasitica CBS 223.65] >gi|641523141|gb|KDO18089.1| hypothetical protein SPRG_16543 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 135.576 bits (340), Expect = 1.596e-35
Identity = 73/204 (35.78%), Postives = 116/204 (56.86%), Query Frame = 0
Query:   48 PSLRLIYFDFGGRAEAIRVALHVGKVPFEDVRITEQEFSQQKAAGKYPFGSVPVLEVDSVAYAQSVGILRYVGRLGGLYPEDPLAGLAIDQVVGSVEDIVVATVPYLFASE-SEKASLKDKLEKNVYPRFFSAFERLLHADEEGFFVGKHLTIADLAVYPILQWITTSIVGPES---LDPFPLLKALFRKIEEHEMVKDYYEQE 247
            PSL+L YFD  GRAE IR+ L +  +PFED R+T   F+ +KA+  +PF  VP L ++ V +AQ   + RYVG+L G+YP DP+  L +D+++   ED+V A +P L   +   K +L  +L  +  P  F+  ER L   +  + +G+ LTIAD+ +Y +     +    P     +D +P  +A++  +  H  V+ YY Q+
Sbjct:    8 PSLKLTYFDMPGRAELIRLVLSLHDIPFEDERLTRDAFAARKAS--FPFEQVPTLTINGVEFAQGHSLARYVGKLTGMYPSDPIDALRVDEMLSFQEDVVQALIPMLREQDIVRKTALARELASSKLPHLFALLERRLAVTKGTYVLGETLTIADVTLYVLFATFQSGRFTPIDTAFVDDYPHWRAIYTSLHGHPKVQAYYAQQ 209          
The following BLAST results are available for this feature:
BLAST of EWM22337.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585102835|gb|EWM22337.1|0.000e+0100.00glutathione s [Nannochloropsis gaditana][more]
gi|873222744|emb|CEM30532.1|5.968e-3839.00unnamed protein product [Vitrella brassicaformis C... [more]
gi|298708221|emb|CBJ30560.1|1.934e-3738.12Glutathione S-transferase [Ectocarpus siliculosus][more]
gi|669149840|ref|XP_008610482.1|2.269e-3735.85hypothetical protein SDRG_06480 [Saprolegnia dicli... [more]
gi|813198154|ref|XP_012208660.1|5.141e-3635.38hypothetical protein SPRG_12960 [Saprolegnia paras... [more]
gi|871251711|ref|XP_005104565.2|5.574e-3640.31PREDICTED: glutathione S-transferase 1-like [Aplys... [more]
gi|1034735426|gb|OAV89533.1|1.016e-3536.71hypothetical protein PTTG_04116 [Puccinia triticin... [more]
gi|954194731|gb|KRX07459.1|1.306e-3538.42Thioredoxin-like fold [Pseudocohnilembus persalinu... [more]
gi|871273337|ref|XP_005111883.2|1.402e-3538.78PREDICTED: glutathione S-transferase 1-like [Aplys... [more]
gi|813219654|ref|XP_012211204.1|1.596e-3535.78hypothetical protein SPRG_16543 [Saprolegnia paras... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna8363rna8363Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications