EWM29821.1, cds832 (CDS) Nannochloropsis gaditana

Overview
NameEWM29821.1
Unique Namecds832
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002456.1:524612..524900 -
Alignment locationCM002456.1:523975..524447 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM29821.1
Productprotein-s-isoprenylcysteine o-methyltransferase
Orig transcript idgnl|cribi|Naga_100017g23.319.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002456.1supercontigCM002456.1:524612..524900 -
CM002456.1supercontigCM002456.1:523975..524447 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
GO annotation for N. gaditana B312020-04-08
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
The following terms have been associated with this CDS:
Vocabulary: Molecular Function
TermDefinition
GO:0016740transferase activity
GO:0004671protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity
Vocabulary: Biological Process
TermDefinition
GO:0006464cellular protein modification process
GO:0006481C-terminal protein methylation
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0005783endoplasmic reticulum
GO:0016021integral component of membrane
Vocabulary: INTERPRO
TermDefinition
IPR025770PPMT_MeTrfase
IPR007269ICMT_MeTrfase
Homology
BLAST of EWM29821.1 vs. NCBI_GenBank
Match: gi|585112402|gb|EWM29821.1| (protein-s-isoprenylcysteine o-methyltransferase [Nannochloropsis gaditana])

HSP 1 Score: 524.628 bits (1350), Expect = 0.000e+0
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0
Query:    1 MLSIDRLQKCLDFNFPAAAANPAFHTNRGVGRIGLAGFLLGGLWGAHLVLFFAALLGNDNKLWLVRWSAYMVSLFCFHFMEFLSTALYKPESVTYDSYMINHSKEYTVAALAAWAEFWLELWFFPDLKISGSFTCLLGLLFLVGGQACRIVAMHTARGHFSHTIMETRQKDHQLVTHGIYRFLRHPSYCGWFWWVVGTQILLCNPLCALIYALVSWRFFAARIKYEEGTLKTFYPQEYPSYCRQTVVGIPFIS 253
            MLSIDRLQKCLDFNFPAAAANPAFHTNRGVGRIGLAGFLLGGLWGAHLVLFFAALLGNDNKLWLVRWSAYMVSLFCFHFMEFLSTALYKPESVTYDSYMINHSKEYTVAALAAWAEFWLELWFFPDLKISGSFTCLLGLLFLVGGQACRIVAMHTARGHFSHTIMETRQKDHQLVTHGIYRFLRHPSYCGWFWWVVGTQILLCNPLCALIYALVSWRFFAARIKYEEGTLKTFYPQEYPSYCRQTVVGIPFIS
Sbjct:    1 MLSIDRLQKCLDFNFPAAAANPAFHTNRGVGRIGLAGFLLGGLWGAHLVLFFAALLGNDNKLWLVRWSAYMVSLFCFHFMEFLSTALYKPESVTYDSYMINHSKEYTVAALAAWAEFWLELWFFPDLKISGSFTCLLGLLFLVGGQACRIVAMHTARGHFSHTIMETRQKDHQLVTHGIYRFLRHPSYCGWFWWVVGTQILLCNPLCALIYALVSWRFFAARIKYEEGTLKTFYPQEYPSYCRQTVVGIPFIS 253          
BLAST of EWM29821.1 vs. NCBI_GenBank
Match: gi|1173949284|gb|OQR97341.1| (isoprenylcysteine carboxyl methyltransferase [Thraustotheca clavata])

HSP 1 Score: 231.876 bits (590), Expect = 4.438e-73
Identity = 110/237 (46.41%), Postives = 158/237 (66.67%), Query Frame = 0
Query:   21 NPAFHTNRGVGRIGLAGFLLGGLWGAHLVLFFAALLGNDNKLWL-----VRWSAYMVSLFCFHFMEFLSTALYKPESVTYDSYMINHSKEYTVAALAAWAEFWLELWFFPDLKISGSFTCLLGLLFLVGGQACRIVAMHTARGHFSHTIMETRQKDHQLVTHGIYRFLRHPSYCGWFWWVVGTQILLCNPLCALIYALVSWRFFAARIKYEEGTLKTFYPQEYPSYCRQTVVGIPFI 252
            +  F ++ G+G++ +A F +G +  AHL L F  +L ND   W+     ++W+ YMV L  FHF EF+STA +KP  V+Y+S+++NHS  Y +A   +WAE+W+E +FFP  K    F   +GL  +V GQ  R+ AM TA+ +FSH I   ++KDHQL+THG+Y+++RHPSY GWF+W VG+Q+ LCNPLC + Y   SW FF  RI YEE  L  F+P+EYP Y  +T+ G+PF+
Sbjct:    3 SSQFTSDVGLGKVAVAAFGIGFVMAAHLCLLFWVILVNDAS-WIYYNAFLQWAVYMVCLTFFHFSEFISTAAFKPGYVSYESFLLNHSDAYQIALFTSWAEYWVEAYFFPSAKFI-QFFMWIGLGLIVMGQLFRVGAMWTAKSNFSHRIEIAKRKDHQLITHGLYKYIRHPSYFGWFYWSVGSQVFLCNPLCTIAYTAASWSFFKDRIPYEEEILLDFFPEEYPQYKARTISGVPFL 237          
BLAST of EWM29821.1 vs. NCBI_GenBank
Match: gi|669157794|ref|XP_008614459.1| (hypothetical protein SDRG_10255 [Saprolegnia diclina VS20] >gi|530733815|gb|EQC32057.1| hypothetical protein SDRG_10255 [Saprolegnia diclina VS20])

HSP 1 Score: 228.794 bits (582), Expect = 7.221e-72
Identity = 108/234 (46.15%), Postives = 154/234 (65.81%), Query Frame = 0
Query:   24 FHTNRGVGRIGLAGFLLGGLWGAHLVLFFAALLGNDNKLWL-----VRWSAYMVSLFCFHFMEFLSTALYKPESVTYDSYMINHSKEYTVAALAAWAEFWLELWFFPDLKISGSFTCLLGLLFLVGGQACRIVAMHTARGHFSHTIMETRQKDHQLVTHGIYRFLRHPSYCGWFWWVVGTQILLCNPLCALIYALVSWRFFAARIKYEEGTLKTFYPQEYPSYCRQTVVGIPFI 252
            F ++ G+G++ +A F +G +   HL L F  +L  D   W      ++W+ YMV L  FHF EF+STA +KP  V+Y+S+++NHS  Y  A   +W E+WLE +FFPD K    F   LGL  +V GQ  R+ AM TA+ +FSH I   ++KDH+L+THG+Y ++RHPSY GWF+W +G+Q+ LCNPLC + Y + SW FF  RI YEE  L  F+P++YP+Y  +TV G+PF+
Sbjct:    6 FTSDVGLGKVAVAAFGIGFVMAVHLCLLFYVVLATDAG-WTYHNATLQWAVYMVCLTFFHFSEFISTAAFKPGFVSYESFLLNHSDAYQAALFTSWVEYWLEAYFFPDAKFRSLFM-WLGLFLIVMGQFFRVGAMWTAKSNFSHRIEVAKRKDHELITHGLYAYIRHPSYFGWFYWSIGSQVFLCNPLCTVAYTVASWSFFKDRIPYEEEILLDFFPEQYPAYKARTVSGVPFV 237          
BLAST of EWM29821.1 vs. NCBI_GenBank
Match: gi|1173929568|gb|OQR82781.1| (isoprenylcysteine carboxyl methyltransferase [Achlya hypogyna])

HSP 1 Score: 228.794 bits (582), Expect = 8.229e-72
Identity = 111/234 (47.44%), Postives = 153/234 (65.38%), Query Frame = 0
Query:   24 FHTNRGVGRIGLAGFLLGGLWGAHLVLFFAALLGNDNKLW-----LVRWSAYMVSLFCFHFMEFLSTALYKPESVTYDSYMINHSKEYTVAALAAWAEFWLELWFFPDLKISGSFTCLLGLLFLVGGQACRIVAMHTARGHFSHTIMETRQKDHQLVTHGIYRFLRHPSYCGWFWWVVGTQILLCNPLCALIYALVSWRFFAARIKYEEGTLKTFYPQEYPSYCRQTVVGIPFI 252
            F ++ G+G++ +A F +G +   HL L F  +L  D   W     +++WS YMV L  FHF EF+STA +KP  V+Y+S+++NHS  Y +A   +WAE+WLE +FFP  K S  F    GL  +V GQ  R+ AM TA+ +FSH I   ++KDHQL+THG+Y ++RHPSY GWF+W +G+Q+ LCNPLC L Y   SW FF  RI YEE  L  F+P EYP Y  +T+ G+PF+
Sbjct:    6 FTSDVGLGKVAVAAFGIGFVMAVHLCLLFWVVLATDAS-WTYHNAILQWSVYMVCLTFFHFSEFISTAAFKPGYVSYESFLLNHSDAYQMALFTSWAEYWLEAYFFPASKFS-PFFMWAGLGLIVMGQFFRVGAMWTAKSNFSHRIEIAKRKDHQLITHGLYTYIRHPSYFGWFYWSIGSQVFLCNPLCTLAYTAASWSFFKDRIPYEEEILLDFFPDEYPQYKARTISGVPFV 237          
BLAST of EWM29821.1 vs. NCBI_GenBank
Match: gi|813149487|ref|XP_012200390.1| (hypothetical protein SPRG_05716 [Saprolegnia parasitica CBS 223.65] >gi|641534901|gb|KDO28831.1| hypothetical protein SPRG_05716 [Saprolegnia parasitica CBS 223.65])

HSP 1 Score: 228.409 bits (581), Expect = 9.077e-72
Identity = 108/234 (46.15%), Postives = 155/234 (66.24%), Query Frame = 0
Query:   24 FHTNRGVGRIGLAGFLLGGLWGAHLVLFFAALLGNDNKLWL-----VRWSAYMVSLFCFHFMEFLSTALYKPESVTYDSYMINHSKEYTVAALAAWAEFWLELWFFPDLKISGSFTCLLGLLFLVGGQACRIVAMHTARGHFSHTIMETRQKDHQLVTHGIYRFLRHPSYCGWFWWVVGTQILLCNPLCALIYALVSWRFFAARIKYEEGTLKTFYPQEYPSYCRQTVVGIPFI 252
            F ++ G+G++ +A F +G +   HL L F  +L  D   W      ++W+ YMV L  FHF EF+STA +KP  V+Y+S+++NHS  Y VA   +W E+W+E +FFPD K    F   LGLL +V GQ  R+ AM TA+ +FSH I   ++KDH+L+THG+Y ++RHPSY GWF+W +G+Q+ LCNPLC + Y   SW FF  RI YEE  L  F+P++YP+Y  +T+ G+PF+
Sbjct:    6 FTSDVGLGKVAVAAFGIGFVMAVHLCLLFYVVLATDAG-WTYHNATLQWAVYMVCLTFFHFSEFISTAAFKPGFVSYESFLLNHSDAYQVALFTSWVEYWVEAYFFPDAKFRPLFM-WLGLLLVVMGQFFRVGAMWTAKSNFSHRIEIAKRKDHELITHGLYTYIRHPSYFGWFYWSIGSQVFLCNPLCTIAYTAASWSFFKDRIPYEEEILLDFFPEQYPAYKARTISGVPFV 237          
BLAST of EWM29821.1 vs. NCBI_GenBank
Match: gi|695385042|ref|XP_009518170.1| (hypothetical protein PHYSODRAFT_310585 [Phytophthora sojae] >gi|348683067|gb|EGZ22882.1| hypothetical protein PHYSODRAFT_310585 [Phytophthora sojae])

HSP 1 Score: 228.409 bits (581), Expect = 1.323e-71
Identity = 117/243 (48.15%), Postives = 163/243 (67.08%), Query Frame = 0
Query:   21 NPAFHTNRGVGRIGLAGFLLGGLWGAHLVLF----FAALLGNDNKL-----W--LVRWSAYMVSLFCFHFMEFLSTALYKPESVTYDSYMINHSKEYTVAALAAWAEFWLELWFFPDLKISGSFTCLLGLLFLVGGQACRIVAMHTARGHFSHTIMETRQKDHQLVTHGIYRFLRHPSYCGWFWWVVGTQILLCNPLCALIYALVSWRFFAARIKYEEGTLKTFYPQEYPSYCRQTVVGIPFI 252
            + AF ++RG+G++ LA F LG     H+ L     F AL G+         W  + +WS Y ++L  FH MEF+ TA Y+P +V+Y+S+++NHS+EY +A L +  EFWLEL+F P  K+  +    +G+  +V GQ  RI AM TA  +FSH I   ++K+H+LVTHG+YRF+RHPSY GWFWW+VG+QILL NPLCA+ Y+LV+W FF  RI YEE  L  F+P EYP+Y  +T+ GIPF+
Sbjct:    4 SDAFRSDRGLGKVALAAFGLGVFMTLHVSLLLYTEFVALSGSAGDATASARWRCVEQWSLYALALGFFHLMEFMLTAAYRPANVSYESFLLNHSQEYHLAVLFSCVEFWLELYFVPSWKLH-ALVRPVGIALVVVGQYFRISAMSTAASNFSHRIEYLKRKEHKLVTHGVYRFIRHPSYLGWFWWIVGSQILLGNPLCAVGYSLVAWSFFHDRIPYEEQLLLAFFPDEYPAYKARTISGIPFV 245          
BLAST of EWM29821.1 vs. NCBI_GenBank
Match: gi|698814322|ref|XP_009840190.1| (hypothetical protein H257_14133 [Aphanomyces astaci] >gi|574104951|gb|ETV70478.1| hypothetical protein H257_14133 [Aphanomyces astaci])

HSP 1 Score: 224.942 bits (572), Expect = 2.599e-70
Identity = 112/234 (47.86%), Postives = 152/234 (64.96%), Query Frame = 0
Query:   24 FHTNRGVGRIGLAGFLLGGLWGAHLVLFFAALLGNDNKLWLVR-----WSAYMVSLFCFHFMEFLSTALYKPESVTYDSYMINHSKEYTVAALAAWAEFWLELWFFPDLKISGSFTCLLGLLFLVGGQACRIVAMHTARGHFSHTIMETRQKDHQLVTHGIYRFLRHPSYCGWFWWVVGTQILLCNPLCALIYALVSWRFFAARIKYEEGTLKTFYPQEYPSYCRQTVVGIPFI 252
            F ++ G+G++ +AGF LG +   H+ LF  A    D   W+ R     WS Y+V L  FHF EF+STA +KP  V+Y+S+++NHS  Y +A  A   EFWLE  FFP+LK     + + GL  +V G + R+ AM TA+ +FSH I   ++KDH LVTHG+Y+++RHPSY GWF+W +G+Q+ LCNPLC L YA  SW FF  RI YEE  L  F+P EYP+Y  +T  GIPF+
Sbjct:    6 FTSDVGLGKVAIAGFGLGFVMALHVCLFIWAYFLTDGDTWVYRNAVIQWSLYVVCLTFFHFSEFISTAAFKPGFVSYESFLLNHSDAYHMALAAGCVEFWLESHFFPELKYIHDVSSV-GLFLIVLGASFRVGAMWTAKSNFSHRIEVAKRKDHTLVTHGVYKYIRHPSYFGWFYWSIGSQVFLCNPLCTLAYAAASWSFFKDRIPYEEELLLEFFPAEYPAYKARTFSGIPFV 238          
BLAST of EWM29821.1 vs. NCBI_GenBank
Match: gi|1214702504|gb|OWZ14682.1| (Isoprenylcysteine carboxyl methyltransferase [Phytophthora megakarya])

HSP 1 Score: 224.557 bits (571), Expect = 4.705e-70
Identity = 115/243 (47.33%), Postives = 163/243 (67.08%), Query Frame = 0
Query:   21 NPAFHTNRGVGRIGLAGFLLGGLWGAHLVLF----FAALLGNDNKL-----W--LVRWSAYMVSLFCFHFMEFLSTALYKPESVTYDSYMINHSKEYTVAALAAWAEFWLELWFFPDLKISGSFTCLLGLLFLVGGQACRIVAMHTARGHFSHTIMETRQKDHQLVTHGIYRFLRHPSYCGWFWWVVGTQILLCNPLCALIYALVSWRFFAARIKYEEGTLKTFYPQEYPSYCRQTVVGIPFI 252
            + AF ++RG+G++ LA F LG     H+ L     F AL  +   +     W  L +WS Y ++L  FH MEFL TA Y+P +V+Y+S+++NHS+EY +A L +  EF+LEL+F P  K+   F   +G+  ++ GQ  R+ AM TA  +FSH I   ++K+HQLVTHG+YRF+RHPSY GWFWW+VG+QILL NP+CA+ Y+ V+W FF  RI YEE  L+ F+P EYP+Y  +T+ GIPF+
Sbjct:    4 SEAFRSDRGLGKVALAAFGLGVFITLHVSLLLYTEFVALDDSSRDITSILRWRCLEQWSLYALALGFFHLMEFLLTAAYRPTNVSYESFLLNHSREYHLAVLFSCVEFFLELYFVPGWKLH-PFVRPVGIALVLIGQFFRVSAMSTAASNFSHRIEYFKRKEHQLVTHGVYRFIRHPSYLGWFWWIVGSQILLANPVCAVGYSFVAWGFFHDRIPYEEQLLEGFFPDEYPAYKSRTISGIPFV 245          
BLAST of EWM29821.1 vs. NCBI_GenBank
Match: gi|567949445|gb|ETK75177.1| (hypothetical protein L915_18173 [Phytophthora parasitica] >gi|567978112|gb|ETL28604.1| hypothetical protein L916_18076 [Phytophthora parasitica] >gi|568007623|gb|ETL81860.1| hypothetical protein L917_17893 [Phytophthora parasitica] >gi|570939499|gb|ETP04756.1| hypothetical protein F441_18550 [Phytophthora parasitica CJ01A1])

HSP 1 Score: 223.787 bits (569), Expect = 8.198e-70
Identity = 116/243 (47.74%), Postives = 165/243 (67.90%), Query Frame = 0
Query:   21 NPAFHTNRGVGRIGLAGFLLGGLWGAH--LVLF--FAALLGNDNKL-----W--LVRWSAYMVSLFCFHFMEFLSTALYKPESVTYDSYMINHSKEYTVAALAAWAEFWLELWFFPDLKISGSFTCLLGLLFLVGGQACRIVAMHTARGHFSHTIMETRQKDHQLVTHGIYRFLRHPSYCGWFWWVVGTQILLCNPLCALIYALVSWRFFAARIKYEEGTLKTFYPQEYPSYCRQTVVGIPFI 252
            + AF ++RG+G++ LA F LG    AH  L+LF  F AL  +         W  L +WS Y ++L  FH MEF+ TA Y+P +V+Y+S+++NHS+EY +A L +  EF+LEL+F P  K+  +F   +G+  ++ GQ  R+ AM TA  +FSH I   ++++H+LVTHG+YRF+RHPSY GWFWW+VG+QILL NP+CA+ Y+LV+W FF  RI YEE  L  F+P EYP Y  +T+ GIPF+
Sbjct:    4 SEAFRSDRGLGKVALAAFGLGVFMTAHASLLLFTEFVALADSTRDATSTLRWRCLEQWSLYALALGFFHLMEFMLTAAYRPANVSYESFLLNHSREYHLAVLLSCLEFFLELYFVPGWKLH-AFVRPVGIALVIMGQFFRVSAMSTAASNFSHRIEYFKREEHELVTHGVYRFIRHPSYLGWFWWIVGSQILLANPVCAVGYSLVAWSFFHDRIPYEEQLLLGFFPDEYPVYKARTISGIPFV 245          
BLAST of EWM29821.1 vs. NCBI_GenBank
Match: gi|570969768|gb|ETP32887.1| (hypothetical protein F442_18495 [Phytophthora parasitica P10297])

HSP 1 Score: 223.787 bits (569), Expect = 8.944e-70
Identity = 116/243 (47.74%), Postives = 165/243 (67.90%), Query Frame = 0
Query:   21 NPAFHTNRGVGRIGLAGFLLGGLWGAH--LVLF--FAALLGNDNKL-----W--LVRWSAYMVSLFCFHFMEFLSTALYKPESVTYDSYMINHSKEYTVAALAAWAEFWLELWFFPDLKISGSFTCLLGLLFLVGGQACRIVAMHTARGHFSHTIMETRQKDHQLVTHGIYRFLRHPSYCGWFWWVVGTQILLCNPLCALIYALVSWRFFAARIKYEEGTLKTFYPQEYPSYCRQTVVGIPFI 252
            + AF ++RG+G++ LA F LG    AH  L+LF  F AL  +         W  L +WS Y ++L  FH MEF+ TA Y+P +V+Y+S+++NHS+EY +A L +  EF+LEL+F P  K+  +F   +G+  ++ GQ  R+ AM TA  +FSH I   ++++H+LVTHG+YRF+RHPSY GWFWW+VG+QILL NP+CA+ Y+LV+W FF  RI YEE  L  F+P EYP Y  +T+ GIPF+
Sbjct:    4 SEAFRSDRGLGKVALAAFGLGVFMTAHASLLLFTEFVALADSTRDATSTLRWRCLEQWSLYALALGFFHLMEFMLTAAYRPANVSYESFLLNHSREYHLAVLLSCLEFFLELYFVPGWKLH-AFVRPVGIALVIMGQFFRVSAMSTAASNFSHRIEYFKREEHELVTHGVYRFIRHPSYLGWFWWIVGSQILLANPVCAVGYSLVAWSFFHDRIPYEEQLLLGFFPDEYPVYKARTISGIPFV 245          
The following BLAST results are available for this feature:
BLAST of EWM29821.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585112402|gb|EWM29821.1|0.000e+0100.00protein-s-isoprenylcysteine o-methyltransferase [N... [more]
gi|1173949284|gb|OQR97341.1|4.438e-7346.41isoprenylcysteine carboxyl methyltransferase [Thra... [more]
gi|669157794|ref|XP_008614459.1|7.221e-7246.15hypothetical protein SDRG_10255 [Saprolegnia dicli... [more]
gi|1173929568|gb|OQR82781.1|8.229e-7247.44isoprenylcysteine carboxyl methyltransferase [Achl... [more]
gi|813149487|ref|XP_012200390.1|9.077e-7246.15hypothetical protein SPRG_05716 [Saprolegnia paras... [more]
gi|695385042|ref|XP_009518170.1|1.323e-7148.15hypothetical protein PHYSODRAFT_310585 [Phytophtho... [more]
gi|698814322|ref|XP_009840190.1|2.599e-7047.86hypothetical protein H257_14133 [Aphanomyces astac... [more]
gi|1214702504|gb|OWZ14682.1|4.705e-7047.33Isoprenylcysteine carboxyl methyltransferase [Phyt... [more]
gi|567949445|gb|ETK75177.1|8.198e-7047.74hypothetical protein L915_18173 [Phytophthora para... [more]
gi|570969768|gb|ETP32887.1|8.944e-7047.74hypothetical protein F442_18495 [Phytophthora para... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna832rna832Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications