EWM22360.1, cds8303 (CDS) Nannochloropsis gaditana
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Overview
Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Analyses
This CDS is derived from or has results from the following analyses
Annotated Terms
The following terms have been associated with this CDS:
Homology
BLAST of EWM22360.1 vs. NCBI_GenBank
Match: gi|585102861|gb|EWM22360.1| (g patch domain-containing protein 8 [Nannochloropsis gaditana]) HSP 1 Score: 946.036 bits (2444), Expect = 0.000e+0 Identity = 477/477 (100.00%), Postives = 477/477 (100.00%), Query Frame = 0
Query: 1 MSHIEKPEEGGAAKGPTSALPPASDWKAAHTGSSAHIDDDTTSYTDILETRASSMALPAATERVSFKRYETAGYLDHGTFDQATIDTPLADDNRGMKLLMKMGWKKDTPLGRAGGNGLVVPLQLVDAGLGGEGLGKGREYDTTAEEATRSRRLLDVEVKETVAIKEERALKAAKEEALKQELKAVVREFYCDICGKQYAGVSDFAVHLSGYEHGHTKRLKEAKEANRARTAAKAGNQAKQDQARHLKQMQRRMAAAGVKTGNAATKAAVPVPHPAPPSNTVSPLNPSLSTLSFHAAPPPQPSALPPPPPPPPQPLPGSAYSPSHPVSSLPLPPLPPPPESAYSRPSPSQHPPYPHGGPAPHLPPSHLHHHQHHPSLPSGHAAQTAGNYCHTHSHHSSPAPPPPPPPPPPPLPPSSALPSFSATASFPPASALSSSPHTLSSAPTNPSLSTELPPTGSRAPMTLSMSFASKAKKRIGR 477
MSHIEKPEEGGAAKGPTSALPPASDWKAAHTGSSAHIDDDTTSYTDILETRASSMALPAATERVSFKRYETAGYLDHGTFDQATIDTPLADDNRGMKLLMKMGWKKDTPLGRAGGNGLVVPLQLVDAGLGGEGLGKGREYDTTAEEATRSRRLLDVEVKETVAIKEERALKAAKEEALKQELKAVVREFYCDICGKQYAGVSDFAVHLSGYEHGHTKRLKEAKEANRARTAAKAGNQAKQDQARHLKQMQRRMAAAGVKTGNAATKAAVPVPHPAPPSNTVSPLNPSLSTLSFHAAPPPQPSALPPPPPPPPQPLPGSAYSPSHPVSSLPLPPLPPPPESAYSRPSPSQHPPYPHGGPAPHLPPSHLHHHQHHPSLPSGHAAQTAGNYCHTHSHHSSPAPPPPPPPPPPPLPPSSALPSFSATASFPPASALSSSPHTLSSAPTNPSLSTELPPTGSRAPMTLSMSFASKAKKRIGR
Sbjct: 1 MSHIEKPEEGGAAKGPTSALPPASDWKAAHTGSSAHIDDDTTSYTDILETRASSMALPAATERVSFKRYETAGYLDHGTFDQATIDTPLADDNRGMKLLMKMGWKKDTPLGRAGGNGLVVPLQLVDAGLGGEGLGKGREYDTTAEEATRSRRLLDVEVKETVAIKEERALKAAKEEALKQELKAVVREFYCDICGKQYAGVSDFAVHLSGYEHGHTKRLKEAKEANRARTAAKAGNQAKQDQARHLKQMQRRMAAAGVKTGNAATKAAVPVPHPAPPSNTVSPLNPSLSTLSFHAAPPPQPSALPPPPPPPPQPLPGSAYSPSHPVSSLPLPPLPPPPESAYSRPSPSQHPPYPHGGPAPHLPPSHLHHHQHHPSLPSGHAAQTAGNYCHTHSHHSSPAPPPPPPPPPPPLPPSSALPSFSATASFPPASALSSSPHTLSSAPTNPSLSTELPPTGSRAPMTLSMSFASKAKKRIGR 477
BLAST of EWM22360.1 vs. NCBI_GenBank
Match: gi|553189388|ref|XP_005854993.1| (d111 g-patch domain-containing protein, partial [Nannochloropsis gaditana CCMP526] >gi|422294069|gb|EKU21369.1| d111 g-patch domain-containing protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 263.848 bits (673), Expect = 4.362e-84 Identity = 126/126 (100.00%), Postives = 126/126 (100.00%), Query Frame = 0
Query: 149 RSRRLLDVEVKETVAIKEERALKAAKEEALKQELKAVVREFYCDICGKQYAGVSDFAVHLSGYEHGHTKRLKEAKEANRARTAAKAGNQAKQDQARHLKQMQRRMAAAGVKTGNAATKAAVPVPHP 274
RSRRLLDVEVKETVAIKEERALKAAKEEALKQELKAVVREFYCDICGKQYAGVSDFAVHLSGYEHGHTKRLKEAKEANRARTAAKAGNQAKQDQARHLKQMQRRMAAAGVKTGNAATKAAVPVPHP
Sbjct: 1 RSRRLLDVEVKETVAIKEERALKAAKEEALKQELKAVVREFYCDICGKQYAGVSDFAVHLSGYEHGHTKRLKEAKEANRARTAAKAGNQAKQDQARHLKQMQRRMAAAGVKTGNAATKAAVPVPHP 126
BLAST of EWM22360.1 vs. NCBI_GenBank
Match: gi|298709577|emb|CBJ31403.1| (WW domain, G-patch, C2H2 zinc finger [Ectocarpus siliculosus]) HSP 1 Score: 164.466 bits (415), Expect = 4.528e-43 Identity = 102/261 (39.08%), Postives = 147/261 (56.32%), Query Frame = 0
Query: 1 MSHIEKPEEGGAAKGPTSALPPASDWKAAHTGSSAHIDDDTTSYTDILETRASSMALPAATERVSFKRYETAGYLDHGTFDQATIDTPLADDNRGMKLLMKMGWKKDTPLGRAGGNGLVVPLQLVDAGLGGEGLGKGREYDTTAEEATRSRRLLDVEVKETVAIKEERALKAAKEEALKQELKAVVREFYCDICGKQYAGVSDFAVHLSGYEHGHTKRLKEAKEANRARTAAKAGNQAKQDQARHLKQMQRRMAAAGVKTG 261
+S EKPEE +A D A S+ + T++ DI E A + FKR ET GY+D + D A++D P+ ++NRG +LL KMGWK LG A G+G+ VP+ ++ + GLGK E D +EA R R+ LD EV ET +K +R KA ++E +K++++ + +EFYC+ CGKQY V + + H S Y+H H KRLKEA EA +AR K N+ K+ Q + ++MQRR+ A TG
Sbjct: 34 VSTFEKPEE------LKTAQERHRDGMLAKGTESSALSRTVTNFDDIDEED------KAGRKTRLFKRNETQGYIDTQSLDAASLDKPIGEENRGFRLLTKMGWKLGQGLG-AKGDGITVPV-VLGTQVATLGLGKSAEDDRYTDEAARERKKLDSEVVETADMKAKRLEKAVRQETIKEQVQEMNKEFYCETCGKQYKNVGEMSNHYSSYDHHHVKRLKEAAEAEKARR-GKTFNRDKE-QRKEWEEMQRRLKATQAATG 278
BLAST of EWM22360.1 vs. NCBI_GenBank
Match: gi|1026274726|gb|OAD07709.1| (C2H2-type zinc finger transcription factor [Mucor circinelloides f. lusitanicus CBS 277.49]) HSP 1 Score: 125.946 bits (315), Expect = 7.941e-29 Identity = 65/161 (40.37%), Postives = 96/161 (59.63%), Query Frame = 0
Query: 71 TAGYLDHGTFDQATIDTPLADDNRGMKLLMKMGWKKDTPLGRAGGNGLV--VPLQLVDAGLGGEGLGKGREYDTTAEEATRSRRLLDVE--VKETVAIKEERALKAAKEEALKQELKAVVREFYCDICGKQYAGVSDFAVHLSGYEHGHTKRLKEAKEANR 227
+AGY+D+ T Q +++T + +DN G +LL KMGW+ LG + G G + + ++L D LG +GK EY TT T R+ LD E ++ET K ER + K++A+ QELK V + FYC++C KQY + ++ HL Y+H H KR K+ KE R
Sbjct: 17 SAGYIDYETTAQVSMETHIPEDNIGYRLLQKMGWQAGRGLG-SQGQGRIDPIRIELKDDSLG---VGKAEEYTTTHVSTTAKRKALDSEKQLEETEIQKMEREYRVEKKQAIAQELKEVKKAFYCELCDKQYKNIGEYEQHLQSYDHHHKKRFKDMKENTR 173
BLAST of EWM22360.1 vs. NCBI_GenBank
Match: gi|511001646|gb|EPB83112.1| (hypothetical protein HMPREF1544_10150 [Mucor circinelloides f. circinelloides 1006PhL]) HSP 1 Score: 124.79 bits (312), Expect = 1.574e-28 Identity = 66/173 (38.15%), Postives = 100/173 (57.80%), Query Frame = 0
Query: 71 TAGYLDHGTFDQATIDTPLADDNRGMKLLMKMGWKKDTPLGRAGGNGLV--VPLQLVDAGLGGEGLGKGREYDTTAEEATRSRRLLDVE--VKETVAIKEERALKAAKEEALKQELKAVVREFYCDICGKQYAGVSDFAVHLSGYEHGHTKRLKEAKEANRARTAAKAGNQAK 239
+ GY D+ T Q +++T + ++N G KLL KMGW+ LG + G G + + ++L D LG +GK EY +T T R+ LD E ++ET K ER + K++A+ QELK V + FYC++C KQY +S++ HL Y+H H KR K+ KE R T ++ + K
Sbjct: 8 STGYSDYETTVQVSMETHIPENNIGYKLLQKMGWQAGKGLG-SQGQGRIDPIRIELKDDSLG---VGKAEEYTSTHVSTTAKRKALDSEKQLEETEIQKMEREYQVEKKQAIAQELKEVKKAFYCELCDKQYKNISEYEQHLQSYDHHHKKRFKDMKENTRNSTINQSEREKK 176
BLAST of EWM22360.1 vs. NCBI_GenBank
Match: gi|695429254|ref|XP_009530146.1| (hypothetical protein PHYSODRAFT_334587 [Phytophthora sojae] >gi|348676579|gb|EGZ16397.1| hypothetical protein PHYSODRAFT_334587 [Phytophthora sojae]) HSP 1 Score: 120.939 bits (302), Expect = 7.934e-28 Identity = 69/165 (41.82%), Postives = 98/165 (59.39%), Query Frame = 0
Query: 93 NRGMKLLMKMGWKKDTPLGRAGGNGLVVPLQLVDAGLGGEGLGKGREYDTTAEEATRSRRLLDVEVKETVAIKEERALKAAKEEALKQELKAVVREFYCDICGKQYAGVSDFAVHLSGYEHGHTKRLKEAKEANRARTAAKAGNQAKQDQARHLKQ----MQRRM 253
NRG +LL+KMGW+ + LGR G+V P+++ + L GLGK EYD + AT RR LD EV+ET ER + AK+E LK E+K++ FYC C KQY V++ HLS Y+H HTKRL+E ++ + R + AK + + L+Q +QRR+
Sbjct: 24 NRGYRLLVKMGWRSGSGLGRHE-QGIVEPVKMKE-NLVCLGLGKAEEYDKVTQLATSERRKLDAEVEETAEQVAEREARGAKQEQLKAEVKSMQAAFYCSDCRKQYKTVTEMESHLSSYDHHHTKRLRELQQQQKRRVGTEEEQSAK--RRKELQQEELMLQRRI 184
BLAST of EWM22360.1 vs. NCBI_GenBank
Match: gi|758345353|dbj|GAN11684.1| (G patch domain-containing protein 8-like [Mucor ambiguus]) HSP 1 Score: 122.094 bits (305), Expect = 1.610e-27 Identity = 66/173 (38.15%), Postives = 99/173 (57.23%), Query Frame = 0
Query: 71 TAGYLDHGTFDQATIDTPLADDNRGMKLLMKMGWKKDTPLGRAGGNGLV--VPLQLVDAGLGGEGLGKGREYDTTAEEATRSRRLLDVE--VKETVAIKEERALKAAKEEALKQELKAVVREFYCDICGKQYAGVSDFAVHLSGYEHGHTKRLKEAKEANRARTAAKAGNQAK 239
+ GY D+ Q +++T + ++N G KLL KMGW+ LG + G G + + ++L D LG +GK EY TT T R+ LD E ++ET K ER + K++A+ QELK V + FYC++C KQY +S++ HL Y+H H KR K+ KE R T ++ + K
Sbjct: 22 STGYSDYEATIQVSMETHIPENNIGYKLLQKMGWQAGRGLG-SQGQGRIDPIRIELKDDSLG---VGKAEEYTTTHVSTTAKRKALDSEKQLEETEIQKIERQYQVEKKQAIAQELKEVKKAFYCELCDKQYKNISEYEQHLQSYDHHHKKRFKDMKENTRNSTINQSEREKK 190
BLAST of EWM22360.1 vs. NCBI_GenBank
Match: gi|1214692889|gb|OWZ07370.1| (hypothetical protein PHMEG_00020243 [Phytophthora megakarya]) HSP 1 Score: 119.783 bits (299), Expect = 2.236e-27 Identity = 71/164 (43.29%), Postives = 96/164 (58.54%), Query Frame = 0
Query: 93 NRGMKLLMKMGWKKDTPLGRAGGNGLVVPLQLVDAGLGGEGLGKGREYDTTAEEATRSRRLLDVEVKETVAIKEERALKAAKEEALKQELKAVVREFYCDICGKQYAGVSDFAVHLSGYEHGHTKRLKEAKEANRARTAAKAGN-QAKQDQARHLKQMQRRMAA 255
NRG +LL KMGW+ LGR G+V P+++ + L GLGK EYD AT RR LDVEV+ET R K AKEE LK E+K + FYC C KQY V++ HLS Y+H HTKRL++ ++ R + + N + K++Q + +QRR+AA
Sbjct: 29 NRGYRLLEKMGWRSGCGLGRQE-QGIVEPIKMKE-NLVCLGLGKAEEYDEVTLLATSERRKLDVEVQETAEQIAAREAKGAKEEQLKVEVKNMQSAFYCSDCRKQYKTVTEMENHLSSYDHHHTKRLRDLQQQKRRLGSEEEQNAKRKKEQQQEELMLQRRIAA 190
BLAST of EWM22360.1 vs. NCBI_GenBank
Match: gi|763815855|gb|KJB82707.1| (hypothetical protein B456_013G210000 [Gossypium raimondii]) HSP 1 Score: 114.775 bits (286), Expect = 9.279e-26 Identity = 75/231 (32.47%), Postives = 117/231 (50.65%), Query Frame = 0
Query: 27 KAAHTGSSAHIDDDTTSYTDILETRASSMALPAA---TERVSFKRYETAGYLDHGTFDQATIDTPLADDNRGMKLLMKMGWKKDTPLGRAGG---NGLVVPLQ--LVDAGLGGEGLGKGREYDTTAEEATRSRRLLDVEVKETVAIKEERALKAAKEEALKQELKAVVREFYCDICGKQYAGVSDFAVHLSGYEHGHTKRLKEAKEANRARTAAKAGNQAKQDQARHLKQM 249
+ A+ G+ I ++ ++E A LP TE V D QAT+DT L N G +LL KMGWK G+ G G++ P++ + D LG +GK E D E RR LD+EV+ET ++R + A +E+ ++ E+K + + FYC++C KQY +F VHLS Y+H H KR KE +E + ++ ++ K++Q R ++M
Sbjct: 10 QGANLGTKQQISEEQAYQDSLVEDLAEDFRLPINHKPTENV-----------DLDNVQQATLDTKLNSSNVGFRLLQKMGWK-----GKGLGKDEQGIIEPIRSGIRDPKLG---IGKQEEDDFFTAEENIQRRKLDIEVEETEEHAKKREVLAEREQKIQTEVKEIRKVFYCELCNKQYKLAMEFEVHLSSYDHNHRKRFKEMREMH---GSSSRDDRQKREQQRQEREM 218
BLAST of EWM22360.1 vs. NCBI_GenBank
Match: gi|727145883|emb|CEG72018.1| (hypothetical protein RMATCC62417_07647 [Rhizopus microsporus]) HSP 1 Score: 117.472 bits (293), Expect = 1.012e-25 Identity = 74/215 (34.42%), Postives = 122/215 (56.74%), Query Frame = 0
Query: 62 ERVSFKRYETAGYLDHGTFDQATIDTPLADDNRGMKLLMKMGWKKDTPLGRAGGNGLVVPLQLVDAGLGGEGLGKGREYDTTAEEATRSRRLLDVE--VKETVAIKEERALKAAKEEALKQELKAVVREFYCDICGKQYAGVSDFAVHLSGYEHGHTKRLKEAKEANRARTAAKAGNQAK--QDQARHLKQMQRRMAAAGVKTG-NAATKAAVPV 271
ERVS + E GY+D + T++T + + N G K++ KMGW + LG + G V P+ L++ G+GK +E + T +T RR LD E ++ET + ER +A K++A+ +EL+ V R FYC++C KQY +S++ HL Y+H H KR KE KE+ R ++ + + +++ R ++++R A K G +AT A+P+
Sbjct: 11 ERVS-RSTEPTGYIDWQQTTKITMETHIPESNIGYKMMQKMGWIAGSGLG-SHSQGRVDPI-LIEVKDETLGVGKAQELEETHVSSTAKRRALDSEKQLEETEIQRIEREYRAEKKQAIMKELEQVKRMFYCELCDKQYNKISEYEQHLQSYDHHHKKRFKEMKESTRNSELNQSERERRLAREKKREERELKRMQEAIQKKIGTTSATSTALPM 222 The following BLAST results are available for this feature:
BLAST of EWM22360.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31) Total hits: 10
Relationships
This CDS is a part of the following mRNA feature(s):
Sequences
Synonyms
Publications
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