EWM30582.1, cds83 (CDS) Nannochloropsis gaditana

Overview
NameEWM30582.1
Unique Namecds83
TypeCDS
OrganismNannochloropsis gaditana (N. gaditana B-31)
Alignment locationCM002455.1:229732..230422 -
Alignment locationCM002455.1:229502..229626 -

Link to JBrowse

Properties
Property NameValue
Protein idEWM30582.1
Producthypothetical protein
Orig transcript idgnl|cribi|Naga_100033g7.8421.mrna
GbkeyCDS
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
CM002455.1supercontigCM002455.1:229732..230422 -
CM002455.1supercontigCM002455.1:229502..229626 -
Analyses
This CDS is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST analysis for N. gaditana B-312020-04-07
InterPro analysis for N. gaditana B-312020-04-06
Gene prediction for N. gaditana B-312014-02-18
Annotated Terms
Homology
BLAST of EWM30582.1 vs. NCBI_GenBank
Match: gi|585113249|gb|EWM30582.1| (hypothetical protein Naga_100033g7 [Nannochloropsis gaditana])

HSP 1 Score: 560.066 bits (1442), Expect = 0.000e+0
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0
Query:    1 MPMENGITALRLWKTASSASDFRDAIDAHYQACIVAMERAGKKELVKLDNFWRKTFPATLQRRQSENKGNDCWITKEELVQTMQWKLARGKMRPLMNLVRGNDSGTVERISRSALIAAQKGDISNAVTIFSGAELKGVGPATASALLAAYRPDLFPFMADEPTMLVLDESGQNGKLKYNLAEYLVFQRAIIGKCREINVPGEKAKSGTARPLDAEEVGRALWCLNRAEALGLLSQEEQRTLLGTKRQAHDSQGVDGRKEQRADRKKKKQSD 271
            MPMENGITALRLWKTASSASDFRDAIDAHYQACIVAMERAGKKELVKLDNFWRKTFPATLQRRQSENKGNDCWITKEELVQTMQWKLARGKMRPLMNLVRGNDSGTVERISRSALIAAQKGDISNAVTIFSGAELKGVGPATASALLAAYRPDLFPFMADEPTMLVLDESGQNGKLKYNLAEYLVFQRAIIGKCREINVPGEKAKSGTARPLDAEEVGRALWCLNRAEALGLLSQEEQRTLLGTKRQAHDSQGVDGRKEQRADRKKKKQSD
Sbjct:    1 MPMENGITALRLWKTASSASDFRDAIDAHYQACIVAMERAGKKELVKLDNFWRKTFPATLQRRQSENKGNDCWITKEELVQTMQWKLARGKMRPLMNLVRGNDSGTVERISRSALIAAQKGDISNAVTIFSGAELKGVGPATASALLAAYRPDLFPFMADEPTMLVLDESGQNGKLKYNLAEYLVFQRAIIGKCREINVPGEKAKSGTARPLDAEEVGRALWCLNRAEALGLLSQEEQRTLLGTKRQAHDSQGVDGRKEQRADRKKKKQSD 271          
BLAST of EWM30582.1 vs. NCBI_GenBank
Match: gi|553188022|ref|XP_005854719.1| (hypothetical protein NGA_2079300, partial [Nannochloropsis gaditana CCMP526] >gi|422294341|gb|EKU21641.1| hypothetical protein NGA_2079300, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 487.263 bits (1253), Expect = 1.174e-173
Identity = 235/235 (100.00%), Postives = 235/235 (100.00%), Query Frame = 0
Query:    1 MPMENGITALRLWKTASSASDFRDAIDAHYQACIVAMERAGKKELVKLDNFWRKTFPATLQRRQSENKGNDCWITKEELVQTMQWKLARGKMRPLMNLVRGNDSGTVERISRSALIAAQKGDISNAVTIFSGAELKGVGPATASALLAAYRPDLFPFMADEPTMLVLDESGQNGKLKYNLAEYLVFQRAIIGKCREINVPGEKAKSGTARPLDAEEVGRALWCLNRAEALGLLSQ 235
            MPMENGITALRLWKTASSASDFRDAIDAHYQACIVAMERAGKKELVKLDNFWRKTFPATLQRRQSENKGNDCWITKEELVQTMQWKLARGKMRPLMNLVRGNDSGTVERISRSALIAAQKGDISNAVTIFSGAELKGVGPATASALLAAYRPDLFPFMADEPTMLVLDESGQNGKLKYNLAEYLVFQRAIIGKCREINVPGEKAKSGTARPLDAEEVGRALWCLNRAEALGLLSQ
Sbjct:    1 MPMENGITALRLWKTASSASDFRDAIDAHYQACIVAMERAGKKELVKLDNFWRKTFPATLQRRQSENKGNDCWITKEELVQTMQWKLARGKMRPLMNLVRGNDSGTVERISRSALIAAQKGDISNAVTIFSGAELKGVGPATASALLAAYRPDLFPFMADEPTMLVLDESGQNGKLKYNLAEYLVFQRAIIGKCREINVPGEKAKSGTARPLDAEEVGRALWCLNRAEALGLLSQ 235          
BLAST of EWM30582.1 vs. NCBI_GenBank
Match: gi|1149751675|ref|XP_020198225.1| (uncharacterized protein LOC109784034 [Aegilops tauschii subsp. tauschii])

HSP 1 Score: 127.102 bits (318), Expect = 2.660e-32
Identity = 86/204 (42.16%), Postives = 113/204 (55.39%), Query Frame = 0
Query:   22 FRDAIDAHYQACIVAMERAGKKELVKLDNFWRKTFPATLQRRQSENKGNDCWITKEELVQTMQWKLARGKMRP-LMNLVRGNDSGTVERISRSALIAAQKGDISNAVTIFSGAELKGVGPATASALLAAYRPDLFPFMADEPTMLVLDESGQNGKLK-YNLAEYLVFQRAIIGKCREINVPGEKAKSGTARPLDAEEVGRALWC 223
            +R A+DA Y   + A++   K +L+  D+F+R   P  L RR       D ++ K ELVQ MQWKL+RGK RP LM+ V+  D   VE  SR A  A    D+S A+T  +   LKGVGPATASA+LAAY PD+ PFM+DE  +  L      G +K Y L +YL F   +  K  E++V GE         L   +V RALW 
Sbjct:   15 WRAALDA-YDRRLAALD---KPDLLDADSFYRHDLPLLLHRRDP-----DPYLAKPELVQLMQWKLSRGKWRPRLMDFVKSLDDKVVESASRKAFAALP--DLSKAITELT--VLKGVGPATASAVLAAYAPDVAPFMSDEAMVAAL------GNVKEYTLKQYLAFAEKLQAKAEELSVGGES--------LTPSDVERALWS 191          
BLAST of EWM30582.1 vs. NCBI_GenBank
Match: gi|573938666|ref|XP_006651771.1| (PREDICTED: uncharacterized protein LOC102722948 [Oryza brachyantha])

HSP 1 Score: 125.561 bits (314), Expect = 1.373e-31
Identity = 79/184 (42.93%), Postives = 106/184 (57.61%), Query Frame = 0
Query:   41 GKKELVKLDNFWRKTFPATLQRRQSENKGNDCWITKEELVQTMQWKLARGKMRP-LMNLVRGNDSGTVERISRSALIAAQKGDISNAVTIFSGAELKGVGPATASALLAAYRPDLFPFMADEPTMLVLDESGQNGKLKYNLAEYLVFQRAIIGKCREINVPGEKAKSGTARPLDAEEVGRALWC 223
            GK +LV++D+F+R   P  L+RR       D ++ K ELV+ +QWKL+RGK RP LM+ V+G +   VE  SR A  A    D+  A+T  +   LKG+GPATASA+LAAY PD  PFM+DE  +  L     N K +Y L +YL F   +  K +E++  GE        P D E   RALWC
Sbjct:   30 GKPDLVEVDSFYRHDLPPLLRRRDP-----DPFLAKPELVRLLQWKLSRGKWRPRLMDFVKGLEDAVVESASRKAFAALP--DLRKAITELTA--LKGIGPATASAILAAYAPDAAPFMSDEAMVATL----GNAK-EYTLKQYLAFAEKLQTKSKELSSRGE-----IFTPSDVE---RALWC 191          
BLAST of EWM30582.1 vs. NCBI_GenBank
Match: gi|514814272|ref|XP_004981908.1| (PREDICTED: uncharacterized protein LOC101755664 [Setaria italica] >gi|944222905|gb|KQK87309.1| hypothetical protein SETIT_037459mg [Setaria italica])

HSP 1 Score: 125.176 bits (313), Expect = 1.964e-31
Identity = 83/188 (44.15%), Postives = 110/188 (58.51%), Query Frame = 0
Query:   37 MERAGKKELVKLDNFWRKTFPATLQRRQSENKGNDCWITKEELVQTMQWKLARGKMRP-LMNLVRGNDSGTVERISRSALIAAQKGDISNAVTIFSGAELKGVGPATASALLAAYRPDLFPFMADEPTMLVLDESGQNGKLKYNLAEYLVFQRAIIGKCREINVPGEKAKSGTARPLDAEEVGRALWC 223
            +E   K +LV +D+F+R   PA L+ R+      D +I K ELV+ +QWKL+RGK RP LM+ V+G D   VE  SR A  A    D+S A+T  +   LKGVGPATASA+LAAY PD+ PFM+DE  +  L     N K  Y L +YL F   +  K +E+ V GE++ +    P D E   RALW 
Sbjct:   26 LEALDKPDLVAVDSFYRHDLPALLRGREP-----DPFIAKPELVRLLQWKLSRGKWRPRLMDFVKGLDDAVVESASRKAFAALP--DLSRAITELT--VLKGVGPATASAVLAAYAPDVAPFMSDEAMVAAL----GNAK-DYTLKQYLAFADKLQAKSKELTV-GEESFT----PSDVE---RALWS 191          
BLAST of EWM30582.1 vs. NCBI_GenBank
Match: gi|848875791|ref|XP_012838365.1| (PREDICTED: uncharacterized protein LOC105958910 isoform X1 [Erythranthe guttata] >gi|604331543|gb|EYU36401.1| hypothetical protein MIMGU_mgv1a013598mg [Erythranthe guttata])

HSP 1 Score: 124.405 bits (311), Expect = 3.588e-31
Identity = 91/253 (35.97%), Postives = 131/253 (51.78%), Query Frame = 0
Query:   16 ASSASDFRDAIDAHYQACIVAMERAGKKELVKLDNFWRKTFPATLQRRQSENKGNDCWITKEELVQTMQWKLARGKMRP-LMNLVRGNDSGTVERISRSALIAAQKGDISNAVTIFSGAELKGVGPATASALLAAYRPDLFPFMADEPTMLVLDESGQNGKLKYNLAEYLVFQRAIIGKCREINVPGEKAKSGTARPLDAEEVGRALWCLNRAEALGLLSQEEQRTLLGTKRQAHDSQGVDGRKEQRADRKKK 267
            +S A  +R+A+ + Y++ I   E  GK  L+ LD+F+R   P  L +R       + +IT +EL + MQWKLARGK RP L++ V   D   V   S  A   A   D+S AV+  +   LKGVGPATASA+LAAY PD+ PFM+DE  + V+ +S       Y+L  YLVF   I  K +E++ P +        P D E   RALW                 + +G K ++  ++  D   E++  RK+K
Sbjct:    5 SSDAGVWREAL-SSYESTI---ESIGKPNLIPLDDFYRNELPNLLHKRNP-----NPYITTDELSKLMQWKLARGKWRPRLLSFVSSLDDAVVRNASGKAF--ASLPDVSKAVSELTV--LKGVGPATASAVLAAYAPDVAPFMSDEAMVAVVGDSKD-----YSLKRYLVFAEKIQIKAKELSSPED-----IFTPSDVE---RALWS----------------STIGAKVKSSSTKSDDVVSEKKPKRKRK 215          
BLAST of EWM30582.1 vs. NCBI_GenBank
Match: gi|1201314898|gb|OVA14575.1| (hypothetical protein BVC80_1811g42 [Macleaya cordata])

HSP 1 Score: 123.635 bits (309), Expect = 6.897e-31
Identity = 83/221 (37.56%), Postives = 118/221 (53.39%), Query Frame = 0
Query:    3 MENGITALRLWKTASSASDFRDAIDAHYQACIVAMERAGKKELVKLDNFWRKTFPATLQRRQSENKGNDCWITKEELVQTMQWKLARGKMRP-LMNLVRGNDSGTVERISRSALIAAQKGDISNAVTIFSGAELKGVGPATASALLAAYRPDLFPFMADEPTMLVLDESGQNGKLKYNLAEYLVFQRAIIGKCREINVPGEKAKSGTARPLDAEEVGRALW 222
            M+   + L+ WK A S+          YQ    ++E   K +L++LD+F+R   P  L +R       +C+ITK EL + MQWKL RGK RP L++ +   D   VE  S+ A  +    D+S A++  +   LKGVGPATASA+LAAY PD+ PFM+DE  +  L  S       Y L +YL F   +  K +E+++ GE     +  P D E   RALW
Sbjct:    1 MDFECSELQQWKEALSS----------YQ---TSLESINKTQLLELDDFYRNQLPPLLHQR-----NPNCFITKSELSKLMQWKLTRGKWRPRLLDFISALDETVVESASQKAFKSL--PDVSKAISELTV--LKGVGPATASAILAAYAPDVAPFMSDEAMVAALGNSKD-----YTLKQYLKFTEKLQSKAKELSLEGE-----SFTPSDVE---RALW 186          
BLAST of EWM30582.1 vs. NCBI_GenBank
Match: gi|326532330|dbj|BAK05094.1| (predicted protein [Hordeum vulgare subsp. vulgare])

HSP 1 Score: 123.25 bits (308), Expect = 8.163e-31
Identity = 81/184 (44.02%), Postives = 103/184 (55.98%), Query Frame = 0
Query:   42 KKELVKLDNFWRKTFPATLQRRQSENKGNDCWITKEELVQTMQWKLARGKMRP-LMNLVRGNDSGTVERISRSALIAAQKGDISNAVTIFSGAELKGVGPATASALLAAYRPDLFPFMADEPTMLVLDESGQNGKLK-YNLAEYLVFQRAIIGKCREINVPGEKAKSGTARPLDAEEVGRALWC 223
            K +L+  D+F+R   P  L RR       D ++ K ELVQ MQWKL+RGK RP LM+ V+  D   VE  SR A  A    D+S A+T  +   LKGVGPATASA+LAAY PD+ PFM+DE  +  L      G +K Y L +YL F   +  K  E++V GE     +  P D E   RALW 
Sbjct:   31 KPDLLDADSFYRHDLPLLLHRRDP-----DPYLAKPELVQLMQWKLSRGKWRPRLMDFVKSLDDKVVESASRKAFAALP--DLSKAITELT--VLKGVGPATASAVLAAYAPDVAPFMSDEAMVAAL------GNVKEYTLKQYLAFAEKLQDKAEELSVGGE-----SFTPSDVE---RALWS 191          
BLAST of EWM30582.1 vs. NCBI_GenBank
Match: gi|747056138|ref|XP_011074324.1| (uncharacterized protein LOC105159080 [Sesamum indicum])

HSP 1 Score: 122.479 bits (306), Expect = 1.762e-30
Identity = 87/254 (34.25%), Postives = 135/254 (53.15%), Query Frame = 0
Query:   16 ASSASDFRDAIDAHYQACIVAMERAGKKELVKLDNFWRKTFPATLQRRQSENKGNDCWITKEELVQTMQWKLARGKMRP-LMNLVRGNDSGTVERISRSALIAAQKGDISNAVTIFSGAELKGVGPATASALLAAYRPDLFPFMADEPTMLVLDESGQNGKLKYNLAEYLVFQRAIIGKCREINVPGEKAKSGTARPLDAEEVGRALWCLNRAEALGLLSQEEQRTLLGTKRQAHDSQGVDGRKEQRADRKKKK 268
            +S A+ +R+A+  +Y+A I  +   GK +++ LD+F+RK  P  L +R       + +IT +EL + MQWKLARGK RP L++ V   D   V   S  A   A   D+S A+T  +   LKGVGPATASA+LAAY PD+ PFM+DE T+ V+ +S       Y+L  Y+VF   +  K +E++   ++            +V RALW                 + +G K +   ++     KE+++ RK+K+
Sbjct:    5 SSDAALWREAL-GYYEAVIKTL---GKPDIISLDDFYRKELPNLLHQRDP-----NPYITTDELSRLMQWKLARGKWRPRLLSFVSSLDDVVVRDTSAKAF--ASLPDVSKAITELTV--LKGVGPATASAVLAAYAPDVAPFMSDEATVAVVGDSKD-----YSLKRYMVFVEKMQAKAKELSTLEDQ--------FTPSDVERALWS----------------STVGAKMRTISTKPDKVDKEKKSQRKRKR 216          
BLAST of EWM30582.1 vs. NCBI_GenBank
Match: gi|1040898589|ref|XP_017257152.1| (PREDICTED: uncharacterized protein LOC108226670 [Daucus carota subsp. sativus] >gi|1021034781|gb|KZM92565.1| hypothetical protein DCAR_020070 [Daucus carota subsp. sativus])

HSP 1 Score: 122.094 bits (305), Expect = 3.755e-30
Identity = 87/224 (38.84%), Postives = 122/224 (54.46%), Query Frame = 0
Query:    3 MENGITALRLWKTASSASDFRDAIDAHYQACIVAMERAGKK-ELVKLDNFWRKTFPATLQRRQSENKGNDCWITKEELVQTMQWKLARGKMRP-LMNLVRGNDSGTVERISRSALIAAQKGDISNAVTIFSGAELKGVGPATASALLAAYRPDLFPFMADEPTMLVLDESGQNGKLK-YNLAEYLVFQRAIIGKCREINVPGEKAKSGTARPLDAEEVGRALWC 223
            ME   T L++WK + S           Y+A + ++    KK +LV LD+F+RK  P  L +R+      + +IT  EL + MQWKL RGK RP L++ V   D  +V+  S+ A  +    DIS A++  S  +LKGVGPATASA+LAAY PD+ PFM+DE     L      G LK Y L +YL+F   +  K +E+++ GE        P D E   RA+W 
Sbjct:    1 MEFKCTDLKVWKQSLS----------EYEARLESLGNNKKKPDLVSLDDFYRKQLPTILHQRKP-----NSYITTSELSKLMQWKLTRGKWRPRLLDFVSSLDEESVKSSSQKAFQSL--PDISKAISELS--KLKGVGPATASAVLAAYAPDVAPFMSDEAMEAAL------GNLKDYTLKQYLLFVEKLQEKSKELSLEGE-----LFTPSDVE---RAIWS 191          
The following BLAST results are available for this feature:
BLAST of EWM30582.1 vs. NCBI_GenBank
Analysis Date: 2020-04-07 (BLAST analysis for N. gaditana B-31)
Total hits: 10
Match NameE-valueIdentityDescription
gi|585113249|gb|EWM30582.1|0.000e+0100.00hypothetical protein Naga_100033g7 [Nannochloropsi... [more]
gi|553188022|ref|XP_005854719.1|1.174e-173100.00hypothetical protein NGA_2079300, partial [Nannoch... [more]
gi|1149751675|ref|XP_020198225.1|2.660e-3242.16uncharacterized protein LOC109784034 [Aegilops tau... [more]
gi|573938666|ref|XP_006651771.1|1.373e-3142.93PREDICTED: uncharacterized protein LOC102722948 [O... [more]
gi|514814272|ref|XP_004981908.1|1.964e-3144.15PREDICTED: uncharacterized protein LOC101755664 [S... [more]
gi|848875791|ref|XP_012838365.1|3.588e-3135.97PREDICTED: uncharacterized protein LOC105958910 is... [more]
gi|1201314898|gb|OVA14575.1|6.897e-3137.56hypothetical protein BVC80_1811g42 [Macleaya corda... [more]
gi|326532330|dbj|BAK05094.1|8.163e-3144.02predicted protein [Hordeum vulgare subsp. vulgare][more]
gi|747056138|ref|XP_011074324.1|1.762e-3034.25uncharacterized protein LOC105159080 [Sesamum indi... [more]
gi|1040898589|ref|XP_017257152.1|3.755e-3038.84PREDICTED: uncharacterized protein LOC108226670 [D... [more]
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Relationships

This CDS is a part of the following mRNA feature(s):

Feature NameUnique NameSpeciesType
rna83rna83Nannochloropsis gaditana (N. gaditana B-31)mRNA


Sequences
Synonyms
Publications